Pregenerated sensors for NPAS4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045903Ensembl transcript IDs: ENSMUST00000056129.9, ENSMUST00000237881.2
Found 234 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCGGTCTGGCGGCCGGGTGAGTCCCGCACCAGGTACACGCACTCGTaGAAGCACACGTGTGACGGCAGATCTGCCTTCCTCCATCGGAAA | + |
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Preference number: 1 (lower is better) Translates to: AVWRPGESRTRYTHS*KHTCDGRSAFLHRK Trigger: TTTCCGATGGAGGAAGGCAGATCTGCCGTCACACGTGTGCTTGCACGAGTGCGTGTACCTGGTGCGGGACTCACCCGGCCGCCAGACCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| 3UTR CCA 90 bp | GAGCCGCCAGGGCGGCAGAGTCCGTCGGAATTGAAATCCCGTTACTaGTTTGTAGAGAATTCTACGTGGGTGTCAAGAGCCCCTCGGGGC | + |
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Preference number: 1 (lower is better) Translates to: EPPGRQSPSELKSRY*FVENSTWVSRAPRG Trigger: GCCCCGAGGGGCTCTTGACACCCACGTAGAATTCTCTACAAACCAGTAACGGGATTTCAATTCCGACGGACTCTGCCGCCCTGGCGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| 3UTR TCA 90 bp | GAGTGGAGAACTGGCCCAGGCCCATGGGGCAGCGCGGTGAGGAAGTaGGACTCCCCCATTCTCCGCTTGAAATCCATTCAAGGAAACTCA | + |
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Preference number: 1 (lower is better) Translates to: EWRTGPGPWGSAVRK*DSPILRLKSIQGNS Trigger: TGAGTTTCCTTGAATGGATTTCAAGCGGAGAATGGGGGAGTCTCACTTCCTCACCGCGCTGCCCCATGGGCCTGGGCCAGTTCTCCACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| 3UTR CCA 90 bp | GCTGAAGAGGAAGGCACAGCCTCCTGGCTGGTGGGGTGTGTAAGGTaGAGTACACACCAAATCCTTGCTCAGGTCTGCTTGGAGGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: AEEEGTASWLVGCVR*STHQILAQVCLEGR Trigger: CCTTCCCTCCAAGCAGACCTGAGCAAGGATTTGGTGTGTACTCCACCTTACACACCCCACCAGCCAGGAGGCTGTGCCTTCCTCTTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR GCA 90 bp | GTGGGGTGTGTAAGGTGGAGTACACACCAAATCCTTGCTCAGGTCTaGTTGGAGGGAAGGCTCAGGCCTAGCAGGGAATGGCAGGTAACT | + |
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Preference number: 1 (lower is better) Translates to: VGCVRWSTHQILAQV*LEGRLRPSREWQVT Trigger: AGTTACCTGCCATTCCCTGCTAGGCCTGAGCCTTCCCTCCAAGCAGACCTGAGCAAGGATTTGGTGTGTACTCCACCTTACACACCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR CCA 90 bp | GGTAGCACTGCTGGGTGTCAACTGTTCAGAGAAAGTCACTGTACTTaGTGTCAGCTGTTCTTGGAGAGAGCTGGACGGAGGGGGCAAGTG | + |
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Preference number: 1 (lower is better) Translates to: GSTAGCQLFRESHCT*CQLFLERAGRRGQV Trigger: CACTTGCCCCCTCCGTCCAGCTCTCTCCAAGAACAGCTGACACCAAGTACAGTGACTTTCTCTGAACAGTTGACACCCAGCAGTGCTACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR CCA 90 bp | TTCAGGAGCCCTGGGGAAGCTGGCACTTCTAGGAGTCCCCAGGGATaGTGTAAAGAGTGGATTAGAGCATTGCTCCTGGGAGAAGACATT | + |
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Preference number: 1 (lower is better) Translates to: FRSPGEAGTSRSPQG*CKEWIRALLLGEDI Trigger: AATGTCTTCTCCCAGGAGCAATGCTCTAATCCACTCTTTACACCATCCCTGGGGACTCCTAGAAGTGCCAGCTTCCCCAGGGCTCCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR CCA 90 bp | CGTAGGGGAATGTTGAGACACCTGTCTCAAAGGCGGTTTCATAGGTaGCCAAGTCCTCCAGGAAGCTGTGATCTTCTGGGGACAGGTTGT | + |
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Preference number: 1 (lower is better) Translates to: RRGMLRHLSQRRFHR*PSPPGSCDLLGTGC Trigger: ACAACCTGTCCCCAGAAGATCACAGCTTCCTGGAGGACTTGGCCACCTATGAAACCGCCTTTGAGACAGGTGTCTCAACATTCCCCTACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR TCA 90 bp | CTGGAGTTGATGCAACTCATCAGCAAACCCTTCGTAGGGGAATGTTaGGACACCTGTCTCAAAGGCGGTTTCATAGGTGGCCAAGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: LELMQLISKPFVGEC*DTCLKGGFIGGQVL Trigger: GAGGACTTGGCCACCTATGAAACCGCCTTTGAGACAGGTGTCTCAACATTCCCCTACGAAGGGTTTGCTGATGAGTTGCATCAACTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR CCA 90 bp | CTGGGAAGTAGCTGGTCAGGGAAGGAAGAGGTGCATGGAGTCAACTaGTCTTCAAAGCTTCTGGCTGAGCTTTCTGTCAACTGTCCTTGT | + |
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Preference number: 1 (lower is better) Translates to: LGSSWSGKEEVHGVN*SSKLLAELSVNCPC Trigger: ACAAGGACAGTTGACAGAAAGCTCAGCCAGAAGCTTTGAAGACCAGTTGACTCCATGCACCTCTTCCTTCCCTGACCAGCTACTTCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR GCA 90 bp | CTTCTAGGAGTCCCCAGGGATGGTGTAAAGAGTGGATTAGAGCATTaGTCCTGGGAGAAGACATTCTCAGAGAATGAGGGTAGCACAGCT | + |
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Preference number: 1 (lower is better) Translates to: LLGVPRDGVKSGLEH*SWEKTFSENEGSTA Trigger: AGCTGTGCTACCCTCATTCTCTGAGAATGTCTTCTCCCAGGAGCAATGCTCTAATCCACTCTTTACACCATCCCTGGGGACTCCTAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR TCA 90 bp | CGCTTGAAATCCATTCAAGGAAACTCACTACGAGTGAATACAGATTaGAATGGAAACTGGGATCGCTCGAAGTCTCTTGATTTTAAAAAG | + |
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Preference number: 1 (lower is better) Translates to: RLKSIQGNSLRVNTD*NGNWDRSKSLDFKK Trigger: CTTTTTAAAATCAAGAGACTTCGAGCGATCCCAGTTTCCATTTCAATCTGTATTCACTCGTAGTGAGTTTCCTTGAATGGATTTCAAGCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGCCCAGAGGCTCTGGGAATGTGGCAGTGCTGGGAAGTAGCTGGTCAGGGGACGGAGGGGGCAAGTaGGTCTGGAAGGGTTCATGG | + |
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Preference number: 2 (lower is better) Translates to: GLPRGSGNVAVLGSSWSGDGGGK*VWKGSW Trigger: CCATGAACCCTTCCAGACTCACTTGCCCCCTCCGTC...CCCTGACCAGCTACTTCCCAGCACTGCCACATTCCCAGAGCCTCTGGGCAGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR-3UTR TCA 90 bp | CCGTTACTGGTTTGTAGAGAATTCTACGTGGGTGTCAAGAGCCCCTCGGGGCACCATGGGGCAGCGCGGTaGGGAAGTGAGACTCCCCCA | + |
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Preference number: 2 (lower is better) Translates to: PLLVCREFYVGVKSPSGHHGAAR*GSETPP Trigger: TGGGGGAGTCTCACTTCCTCACCGCGCTGCCCCATG...GTGCCCCGAGGGGCTCTTGACACCCACGTAGAATTCTCTACAAACCAGTAACGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGCCCAGAGGCTCTGGGAATGTGGCAGTGCTGGGAAGTAGCTGGTCAGGGCCTCCATGCTTGGCTTaGAGTCTCACCACCATTTCA | + |
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Preference number: 2 (lower is better) Translates to: GLPRGSGNVAVLGSSWSGPPCLA*SLTTIS Trigger: TGAAATGGTGGTGAGACTTCAAGCCAAGCATGGAGG...CCCTGACCAGCTACTTCCCAGCACTGCCACATTCCCAGAGCCTCTGGGCAGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR-3UTR GCA 90 bp | ACCCTTCGTAGGGGAATGTTGAGACACCTGTCTCAAAGGCGGTTTCATAGGTGGCTGGGAGGAGTCAGCTaGTCATGGGCGGGGCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: TLRRGMLRHLSQRRFHRWLGGVS*SWAGLP Trigger: GGGCAGCCCCGCCCATGAGCAGCTGACTCCTCCCAG...CCACCTATGAAACCGCCTTTGAGACAGGTGTCTCAACATTCCCCTACGAAGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGCCCAGAGGCTCTGGGAATGTGGCAGTGCTGGGAAGTAGCTGGTCAGGGAGCTCTTTGGAGGGTTaGGGAAGCTCTTCTGGTGTT | + |
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Preference number: 2 (lower is better) Translates to: GLPRGSGNVAVLGSSWSGSSLEG*GSSSGV Trigger: AACACCAGAAGAGCTTCCCCAACCCTCCAAAGAGCT...CCCTGACCAGCTACTTCCCAGCACTGCCACATTCCCAGAGCCTCTGGGCAGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGCCAGGAGTGTACAGTCCCCATTACCAGGGCTGCTAGGACTTGGGGGCAACCTGGGAAGGTTTGGCTaGGGCTGTTCAGATGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: RARSVQSPLPGLLGLGGNLGRFG*GCSDEP Trigger: AGGCTCATCTGAACAGCCCCAGCCAAACCTTCCCAG...GTTGCCCCCAAGTCCTAGCAGCCCTGGTAATGGGGACTGTACACTCCTGGCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR CAA 90 bp | GCATCCCTCCTGGGCGAAGTAAGTCTTGGTAGGATTGGGGCTCAGTaGCTCTGGGAAGGTTTGGCTGGGGCTGTTCAGATGAGCCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: ASLLGEVSLGRIGAQ*LWEGLAGAVQMSLE Trigger: TTCCAGGCTCATCTGAACAGCCCCAGCCAAACCTTCCCAGAGCAACTGAGCCCCAATCCTACCAAGACTTACTTCGCCCAGGAGGGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCGCGGGGCGCAAAAGTCACAGGAAGAGCCGCCAGGGCGGCAGAGTCCGTCGGAAACTCACTACGAGTaGATACAGATTGAAATGGAA | + |
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Preference number: 2 (lower is better) Translates to: RRGAQKSQEEPPGRQSPSETHYE*IQIEME Trigger: TTCCATTTCAATCTGTATTCACTCGTAGTGAGTTTC...CGACGGACTCTGCCGCCCTGGCGGCTCTTCCTGTGACTTTTGCGCCCCGCGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| 3UTR CAA 90 bp | GAAGTAAGTCTTGGTAGGATTGGGGCTCAGTTGCTCTGGGAAGGTTaGGCTGGGGCTGTTCAGATGAGCCTGGAATGCTGTGCTGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: EVSLGRIGAQLLWEG*AGAVQMSLECCAGR Trigger: CCTCCCAGCACAGCATTCCAGGCTCATCTGAACAGCCCCAGCCAAACCTTCCCAGAGCAACTGAGCCCCAATCCTACCAAGACTTACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGGAGTTGATGCAACTCATCAGCAAACCCTTCGTAGGGGAATGTTGAGACACAGTGCCAGCCTCAGCTaGGAAGGGCCTGTCCACGCC | + |
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Preference number: 2 (lower is better) Translates to: SGVDATHQQTLRRGMLRHSASLS*EGPVHA Trigger: GGCGTGGACAGGCCCTTCTCAGCTGAGGCTGGCACT...GTGTCTCAACATTCCCCTACGAAGGGTTTGCTGATGAGTTGCATCAACTCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR CAA 90 bp | GGGTGTGTAAGGTGGAGTACACACCAAATCCTTGCTCAGGTCTGCTaGGAGGGAAGGCTCAGGCCTAGCAGGGAATGGCAGGTAACTGAA | + |
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Preference number: 2 (lower is better) Translates to: GCVRWSTHQILAQVC*EGRLRPSREWQVTE Trigger: TTCAGTTACCTGCCATTCCCTGCTAGGCCTGAGCCTTCCCTCCAAGCAGACCTGAGCAAGGATTTGGTGTGTACTCCACCTTACACACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR-3UTR TCA 90 bp | AGATCCATGAAGATGTCTTCCACTGGCGTCTCTTCCAGGAATAAATTATCAGGGAGGGGGCCCCGGAGCTaGGCTAGGGCCAGGAGTGTA | + |
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Preference number: 2 (lower is better) Translates to: RSMKMSSTGVSSRNKLSGRGPRS*ARARSV Trigger: TACACTCCTGGCCCTAGCTCAGCTCCGGGGCCCCCT...CCCTGATAATTTATTCCTGGAAGAGACGCCAGTGGAAGACATCTTCATGGATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTGGGGGCAACTTCTCATAGAGAAAACTGCATCCCTCCTGGGCGAAGTAAGTGAAGGCACAGCCTCCTaGCTGGTGGGGTGTGTAAGG | + |
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Preference number: 2 (lower is better) Translates to: TWGQLLIEKTASLLGEVSEGTAS*LVGCVR Trigger: CCTTACACACCCCACCAGCCAGGAGGCTGTGCCTTC...ACTTACTTCGCCCAGGAGGGATGCAGTTTTCTCTATGAGAAGTTGCCCCCAAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGACTTTATTATAAAGTTGGCTACAAAGTCACCGCAGCACCACGAGGTGGCCGTGCAAGCACACGTGTaGCGGCAGATCTGCCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: LDFIIKLATKSPQHHEVAVQAHV*RQICLP Trigger: AGGAAGGCAGATCTGCCGTCACACGTGTGCTTGCAC...GGCCACCTCGTGGTGCTGCGGTGACTTTGTAGCCAACTTTATAATAAAGTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| 3UTR-3UTR CCA 90 bp | GTCTGGGAAGGTAGCACTGCTGGGTGTCAACTGTTCAGAGAAAGTCACTGTACTGTTCTTGGAGAGAGCTaGACGGAGGGGGCAAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: VWEGSTAGCQLFRESHCTVLGES*TEGASE Trigger: CTCACTTGCCCCCTCCGTCCAGCTCTCTCCAAGAAC...AGTACAGTGACTTTCTCTGAACAGTTGACACCCAGCAGTGCTACCTTCCCAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR CAA 90 bp | CAAAAGTCACAGGAAGAGCCGCCAGGGCGGCAGAGTCCGTCGGAATaGAAATCCCGTTACTGGTTTGTAGAGAATTCTACGTGGGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: QKSQEEPPGRQSPSE*KSRYWFVENSTWVS Trigger: TGACACCCACGTAGAATTCTCTACAAACCAGTAACGGGATTTCAATTCCGACGGACTCTGCCGCCCTGGCGGCTCTTCCTGTGACTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| 3UTR CAA 90 bp | TGTCAACTGTTCAGAGAAAGTCACTGTACTTGGTGTCAGCTGTTCTaGGAGAGAGCTGGACGGAGGGGGCAAGTGAGTCTGGAAGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: CQLFRESHCTWCQLF*ERAGRRGQVSLEGF Trigger: GAACCCTTCCAGACTCACTTGCCCCCTCCGTCCAGCTCTCTCCAAGAACAGCTGACACCAAGTACAGTGACTTTCTCTGAACAGTTGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTGGGGGCAACTTCTCATAGAGAAAACTGCATCCCTCCTGGGCGAAGTAAGTTCTTCAGAGTTTAGCTaGTGGCGGAGGCTCCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: TWGQLLIEKTASLLGEVSSSEFS*WRRLQA Trigger: AGCCTGGAGCCTCCGCCAGCAGCTAAACTCTGAAGA...ACTTACTTCGCCCAGGAGGGATGCAGTTTTCTCTATGAGAAGTTGCCCCCAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR-3UTR GCA 90 bp | GGTTTCATAGGTGGCCAAGTCCTCCAGGAAGCTGTGATCTTCTGGGGACAGGTTTCTCATAGAGAAAACTaGATCCCTCCTGGGCGAAGT | + |
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Preference number: 2 (lower is better) Translates to: GFIGGQVLQEAVIFWGQVSHREN*IPPGRS Trigger: ACTTCGCCCAGGAGGGATGCAGTTTTCTCTATGAGA...AACCTGTCCCCAGAAGATCACAGCTTCCTGGAGGACTTGGCCACCTATGAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTTCATAGGTGGCCAAGTCCTCCAGGAAGCTGTGATCTTCTGGGGACAGGTTAGGAGTCCCCAGGGATaGTGTAAAGAGTGGATTAGA | + |
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Preference number: 2 (lower is better) Translates to: GFIGGQVLQEAVIFWGQVRSPQG*CKEWIR Trigger: TCTAATCCACTCTTTACACCATCCCTGGGGACTCCT...AACCTGTCCCCAGAAGATCACAGCTTCCTGGAGGACTTGGCCACCTATGAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR-3UTR CCA 90 bp | GGAATAAATTATCAGGGTCAACCAGGAAGTCCAGCTCCTGGCATTTCCAGGGTTCCTGGAATGCTGTGCTaGGAGGAGTCAGCTGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: GINYQGQPGSPAPGISRVPGMLC*EESAAH Trigger: ATGAGCAGCTGACTCCTCCCAGCACAGCATTCCAGG...AACCCTGGAAATGCCAGGAGCTGGACTTCCTGGTTGACCCTGATAATTTATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR CAA 90 bp | ACGATCTATCTCATTTTGCTCTTTCTCTGTGTAGTGGAAGAAACTTaGCTTGACTGGAGAGGCCTCAGGTGTGAGCAGGCCTTCGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: TIYLILLFLCVVEET*LDWRGLRCEQAFGH Trigger: GTGCCCGAAGGCCTGCTCACACCTGAGGCCTCTCCAGTCAAGCAAAGTTTCTTCCACTACACAGAGAAAGAGCAAAATGAGATAGATCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR CAA 90 bp | TCTGGAGTTGATGCAACTCATCAGCAAACCCTTCGTAGGGGAATGTaGAGACACCTGTCTCAAAGGCGGTTTCATAGGTGGCCAAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: SGVDATHQQTLRRGM*RHLSQRRFHRWPSP Trigger: AGGACTTGGCCACCTATGAAACCGCCTTTGAGACAGGTGTCTCAACATTCCCCTACGAAGGGTTTGCTGATGAGTTGCATCAACTCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR-3UTR TCA 90 bp | GGAATAAATTATCAGGGTCAACCAGGAAGTCCAGCTCCTGGCATTTCCAGGGTTGGAATGGCAGGTAACTaGAGTCCAGCTCTTTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: GINYQGQPGSPAPGISRVGMAGN*SPALWR Trigger: CCTCCAAAGAGCTGGACTTCAGTTACCTGCCATTCC...AACCCTGGAAATGCCAGGAGCTGGACTTCCTGGTTGACCCTGATAATTTATTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGGGGTCTGGAGTAGAAAGATCCATGAAGATGTCTTCCACTGGCGTCTCTTCAGGCCTAGCAGGGAATaGCAGGTAACTGAAGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: IGVWSRKIHEDVFHWRLFRPSRE*QVTEVQ Trigger: CTGGACTTCAGTTACCTGCCATTCCCTGCTAGGCCT...GAAGAGACGCCAGTGGAAGACATCTTCATGGATCTTTCTACTCCAGACCCCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCCACGTCTTGATGACAATATGCCATACTTGAAGACGTTAAGTCACAGACTTTCAGAGTTTAGCTGCTaGCGGAGGCTCCAGGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: APRLDDNMPYLKTLSHRLSEFSC*RRLQAS Trigger: GGAAGCCTGGAGCCTCCGCCAGCAGCTAAACTCTGA...AAGTCTGTGACTTAACGTCTTCAAGTATGGCATATTGTCATCAAGACGTGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGGGGTCTGGAGTAGAAAGATCCATGAAGATGTCTTCCACTGGCGTCTCTTCGTCCTTGTAGTGAACTaGTTAGTGGGTCTGGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: IGVWSRKIHEDVFHWRLFVLVVN*LVGLGR Trigger: CCTTCCCAGACCCACTAACCAGTTCACTACAAGGAC...GAAGAGACGCCAGTGGAAGACATCTTCATGGATCTTTCTACTCCAGACCCCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR-3UTR GCA 90 bp | GGGTCTGGGAAGGTAGCACTGCTGGGTGTCAACTGTTCAGAGAAAGTCACTGTACTTCTGAGTATAGCATaGAGTAAATCCATGTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: GSGKVALLGVNCSEKVTVLLSIA*SKSMSS Trigger: GCTGGACATGGATTTACTGCATGCTATACTCAGAAG...TACAGTGACTTTCTCTGAACAGTTGACACCCAGCAGTGCTACCTTCCCAGACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTGGGAAGGTAGCACTGCTGGGTGTCAACTGTTCAGAGAAAGTCACTGTACTGGATGGTGTAAAGAGTaGATTAGAGCATTGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: VWEGSTAGCQLFRESHCTGWCKE*IRALLL Trigger: CAGGAGCAATGCTCTAATCCACTCTTTACACCATCC...AGTACAGTGACTTTCTCTGAACAGTTGACACCCAGCAGTGCTACCTTCCCAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGGAGTTGATGCAACTCATCAGCAAACCCTTCGTAGGGGAATGTTGAGACACTTAGAGCATTGCTCCTaGGAGAAGACATTCTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: SGVDATHQQTLRRGMLRHLEHCS*EKTFSE Trigger: CTCTGAGAATGTCTTCTCCCAGGAGCAATGCTCTAA...GTGTCTCAACATTCCCCTACGAAGGGTTTGCTGATGAGTTGCATCAACTCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR CAA 90 bp | CTGAGCCAACTGGCTGATCTGCTGAATGAGACGATCTATCTCATTTaGCTCTTTCTCTGTGTAGTGGAAGAAACTTTGCTTGACTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LSQLADLLNETIYLI*LFLCVVEETLLDWR Trigger: TCTCCAGTCAAGCAAAGTTTCTTCCACTACACAGAGAAAGAGCAAAATGAGATAGATCGTCTCATTCAGCAGATCAGCCAGTTGGCTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGGACTTTATTATAAAGTTGGCTACAAAGTCACCGCAGCACCACGAGGTGGCGAATACAGATTGAAATaGAAACTGGGATCGCTCGAA | + |
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Preference number: 2 (lower is better) Translates to: TGLYYKVGYKVTAAPRGGEYRLK*KLGSLE Trigger: TTCGAGCGATCCCAGTTTCCATTTCAATCTGTATTC...GCCACCTCGTGGTGCTGCGGTGACTTTGTAGCCAACTTTATAATAAAGTCCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| 3UTR-3UTR CCA 90 bp | GCTCCACGTCTTGATGACAATATGCCATACTTGAAGACGTTAAGTCACAGACTTGTGCATGGAGTCAACTaGTCTTCAAAGCTTCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: APRLDDNMPYLKTLSHRLVHGVN*SSKLLA Trigger: AGCCAGAAGCTTTGAAGACCAGTTGACTCCATGCAC...AAGTCTGTGACTTAACGTCTTCAAGTATGGCATATTGTCATCAAGACGTGGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| 3UTR TCA 72 bp | GCCACCTGGGCAAGCCTAGGCGGTCTGGCGGCCGGGTaGGTCCCGCACCAGGTACACGCACTCGTGCAAGCA | + |
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Preference number: 3 (lower is better) Translates to: ATWASLGGLAAG*VPHQVHALVQA Trigger: TGCTTGCACGAGTGCGTGTACCTGGTGCGGGACTCACCCGGCCGCCAGACCGCCTAGGCTTGCCCAGGTGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| 3UTR GCA 72 bp | CGGCCGGGTGAGTCCCGCACCAGGTACACGCACTCGTaGAAGCACACGTGTGACGGCAGATCTGCCTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RPGESRTRYTHS*KHTCDGRSAFL Trigger: GAGGAAGGCAGATCTGCCGTCACACGTGTGCTTGCACGAGTGCGTGTACCTGGTGCGGGACTCACCCGGCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| 3UTR CCA 72 bp | GGCTGGGGCTGTTCAGATGAGCCTGGAATGCTGTGCTaGGAGGAGTCAGCTGCTCATGGGCGGGGCTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GWGCSDEPGMLC*EESAAHGRGCP Trigger: TGGGCAGCCCCGCCCATGAGCAGCTGACTCCTCCCAGCACAGCATTCCAGGCTCATCTGAACAGCCCCAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCGCAGCACCACGAGGTGGCCACCTGGGCAAGCCTAGGCGGTCTGGCGGCCGGTCCCCCATTCTCCGCTaGAAATCCATTCAAGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: TAAPRGGHLGKPRRSGGRSPILR*KSIQGN Trigger: GTTTCCTTGAATGGATTTCAAGCGGAGAATGGGGGA...CCGGCCGCCAGACCGCCTAGGCTTGCCCAGGTGGCCACCTCGTGGTGCTGCGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCGCGGGGCGCAAAAGTCACAGGAAGAGCCGCCAGGGCGGCAGAGTCCGTCACGAGTGAATACAGATaGAAATGGAAACTGGGATCG | + |
|
Preference number: 3 (lower is better) Translates to: QARGAKVTGRAARAAESVTSEYR*KWKLGS Trigger: CGATCCCAGTTTCCATTTCAATCTGTATTCACTCGT...GACGGACTCTGCCGCCCTGGCGGCTCTTCCTGTGACTTTTGCGCCCCGCGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| 3UTR TCA 72 bp | CCGCACCAGGTACACGCACTCGTGCAAGCACACGTGTaGCGGCAGATCTGCCTTCCTCCATCGGAAAGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: PHQVHALVQAHV*RQICLPPSERN Trigger: ATTCCTTTCCGATGGAGGAAGGCAGATCTGCCGTCACACGTGTGCTTGCACGAGTGCGTGTACCTGGTGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| 3UTR CCA 72 bp | GGTGGAGTACACACCAAATCCTTGCTCAGGTCTGCTTaGAGGGAAGGCTCAGGCCTAGCAGGGAATGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GGVHTKSLLRSA*REGSGLAGNGR Trigger: CCTGCCATTCCCTGCTAGGCCTGAGCCTTCCCTCCAAGCAGACCTGAGCAAGGATTTGGTGTGTACTCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| 3UTR TCA 72 bp | AGCTGTTCTTGGAGAGAGCTGGACGGAGGGGGCAAGTaGGTCTGGAAGGGTTCATGGAGGCTGAAGAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SCSWRELDGGGK*VWKGSWRLKRK Trigger: CTTCCTCTTCAGCCTCCATGAACCCTTCCAGACTCACTTGCCCCCTCCGTCCAGCTCTCTCCAAGAACAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| 3UTR CCA 72 bp | GAAGGCACAGCCTCCTGGCTGGTGGGGTGTGTAAGGTaGAGTACACACCAAATCCTTGCTCAGGTCTGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: EGTASWLVGCVR*STHQILAQVCL Trigger: CAAGCAGACCTGAGCAAGGATTTGGTGTGTACTCCACCTTACACACCCCACCAGCCAGGAGGCTGTGCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| 3UTR GCA 72 bp | GTAAGGTGGAGTACACACCAAATCCTTGCTCAGGTCTaGTTGGAGGGAAGGCTCAGGCCTAGCAGGGAATGG | + |
|
Preference number: 3 (lower is better) Translates to: VRWSTHQILAQV*LEGRLRPSREW Trigger: CCATTCCCTGCTAGGCCTGAGCCTTCCCTCCAAGCAGACCTGAGCAAGGATTTGGTGTGTACTCCACCTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| 3UTR CCA 72 bp | CCTGGGGAAGCTGGCACTTCTAGGAGTCCCCAGGGATaGTGTAAAGAGTGGATTAGAGCATTGCTCCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PGEAGTSRSPQG*CKEWIRALLLG Trigger: TCCCAGGAGCAATGCTCTAATCCACTCTTTACACCATCCCTGGGGACTCCTAGAAGTGCCAGCTTCCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCCTTCGTAGGGGAATGTTGAGACACCTGTCTCAAAGGCGGTTTCATAGGTGGTCTGGGGACAGGTTGTaGCAAGGTGACAGGGTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: TLRRGMLRHLSQRRFHRWSGDRL*QGDRVP Trigger: AGGGACCCTGTCACCTTGCAACAACCTGTCCCCAGA...CCACCTATGAAACCGCCTTTGAGACAGGTGTCTCAACATTCCCCTACGAAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| 3UTR CCA 72 bp | TCACTGTACTTGGTGTCAGCTGTTCTTGGAGAGAGCTaGACGGAGGGGGCAAGTGAGTCTGGAAGGGTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: SLYLVSAVLGES*TEGASESGRVH Trigger: ATGAACCCTTCCAGACTCACTTGCCCCCTCCGTCCAGCTCTCTCCAAGAACAGCTGACACCAAGTACAGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCGCGGTGAGGAAGTGAGACTCCCCCATTCTCCGCTTGAAATCCATTCAAGGGAGCGGCTCCACGTCTaGATGACAATATGCCATACT | + |
|
Preference number: 3 (lower is better) Translates to: QRGEEVRLPHSPLEIHSRERLHV*MTICHT Trigger: AGTATGGCATATTGTCATCAAGACGTGGAGCCGCTC...CCTTGAATGGATTTCAAGCGGAGAATGGGGGAGTCTCACTTCCTCACCGCGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGTGTCAGCTGTTCTTGGAGAGAGCTGGACGGAGGGGGCAAGTGAGTCTGGAAGAGTGGATTAGAGCATaGCTCCTGGGAGAAGACATT | + |
|
Preference number: 3 (lower is better) Translates to: WCQLFLERAGRRGQVSLEEWIRA*LLGEDI Trigger: AATGTCTTCTCCCAGGAGCAATGCTCTAATCCACTC...TTCCAGACTCACTTGCCCCCTCCGTCCAGCTCTCTCCAAGAACAGCTGACACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTCATAGGTGGCCAAGTCCTCCAGGAAGCTGTGATCTTCTGGGGACAGGTTGTACACACCAAATCCTaGCTCAGGTCTGCTTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GFIGGQVLQEAVIFWGQVVHTKS*LRSAWR Trigger: CCTCCAAGCAGACCTGAGCAAGGATTTGGTGTGTAC...AACCTGTCCCCAGAAGATCACAGCTTCCTGGAGGACTTGGCCACCTATGAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| 3UTR CCA 72 bp | GGGCGGCAGAGTCCGTCGGAATTGAAATCCCGTTACTaGTTTGTAGAGAATTCTACGTGGGTGTCAAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GRQSPSELKSRY*FVENSTWVSRA Trigger: GGCTCTTGACACCCACGTAGAATTCTCTACAAACCAGTAACGGGATTTCAATTCCGACGGACTCTGCCGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| 3UTR CCA 72 bp | GCTGGGTGTCAACTGTTCAGAGAAAGTCACTGTACTTaGTGTCAGCTGTTCTTGGAGAGAGCTGGACGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: AGCQLFRESHCT*CQLFLERAGRR Trigger: CCTCCGTCCAGCTCTCTCCAAGAACAGCTGACACCAAGTACAGTGACTTTCTCTGAACAGTTGACACCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| 3UTR CCA 72 bp | ATGTTGAGACACCTGTCTCAAAGGCGGTTTCATAGGTaGCCAAGTCCTCCAGGAAGCTGTGATCTTCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: MLRHLSQRRFHR*PSPPGSCDLLG Trigger: CCCCAGAAGATCACAGCTTCCTGGAGGACTTGGCCACCTATGAAACCGCCTTTGAGACAGGTGTCTCAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAGAAGACATTCTCAGAGAATGAGGGTAGCACAGCTGGGGTTCCTAGGACAGAGCGGCTCCACGTCTaGATGACAATATGCCATACT | + |
|
Preference number: 3 (lower is better) Translates to: WEKTFSENEGSTAGVPRTERLHV*MTICHT Trigger: AGTATGGCATATTGTCATCAAGACGTGGAGCCGCTC...TGTCCTAGGAACCCCAGCTGTGCTACCCTCATTCTCTGAGAATGTCTTCTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTCCACGTCTTGATGACAATATGCCATACTTGAAGACGTTAAGTCACAGACTTAGCCCAGGGGTGGCTTaGCCCCTAGGAGTGGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: APRLDDNMPYLKTLSHRLSPGVA*PLGVEN Trigger: GTTCTCCACTCCTAGGGGCAAAGCCACCCCTGGGCT...AAGTCTGTGACTTAACGTCTTCAAGTATGGCATATTGTCATCAAGACGTGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGAGTTGATGCAACTCATCAGCAAACCCTTCGTAGGGGAATGTTGAGACACCTGAAGTCCAGCTCTTaGGAGGGTTGGGGAAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SGVDATHQQTLRRGMLRHLKSSS*EGWGSS Trigger: AGAGCTTCCCCAACCCTCCAAAGAGCTGGACTTCAG...GTGTCTCAACATTCCCCTACGAAGGGTTTGCTGATGAGTTGCATCAACTCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGCTGTCTTGAACTTGGCTCTGGAGTTGATGCAACTCATCAGCAAACCCTTTCTTCTGGGGACAGGTaGTTGCAAGGTGACAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GSCLELGSGVDATHQQTLSSGDR*LQGDRV Trigger: GACCCTGTCACCTTGCAACAACCTGTCCCCAGAAGA...AAGGGTTTGCTGATGAGTTGCATCAACTCCAGAGCCAAGTTCAAGACAGCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| 3UTR CCA 72 bp | GGCACTTCTAGGAGTCCCCAGGGATGGTGTAAAGAGTaGATTAGAGCATTGCTCCTGGGAGAAGACATTCTC | + |
|
Preference number: 3 (lower is better) Translates to: GTSRSPQGWCKE*IRALLLGEDIL Trigger: GAGAATGTCTTCTCCCAGGAGCAATGCTCTAATCCACTCTTTACACCATCCCTGGGGACTCCTAGAAGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCCTTCGTAGGGGAATGTTGAGACACCTGTCTCAAAGGCGGTTTCATAGGTGGGAAGCTCTTCTGGTGTaGAGATCACACCTAGTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: TLRRGMLRHLSQRRFHRWEALLV*RSHLVQ Trigger: CTGAACTAGGTGTGATCTCAACACCAGAAGAGCTTC...CCACCTATGAAACCGCCTTTGAGACAGGTGTCTCAACATTCCCCTACGAAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| 3UTR GCA 72 bp | GTCCCCAGGGATGGTGTAAAGAGTGGATTAGAGCATTaGTCCTGGGAGAAGACATTCTCAGAGAATGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: VPRDGVKSGLEH*SWEKTFSENEG Trigger: ACCCTCATTCTCTGAGAATGTCTTCTCCCAGGAGCAATGCTCTAATCCACTCTTTACACCATCCCTGGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTCCACGTCTTGATGACAATATGCCATACTTGAAGACGTTAAGTCACAGACTTTGGTGTCAGCTGTTCTaGGAGAGAGCTGGACGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: APRLDDNMPYLKTLSHRLWCQLF*ERAGRR Trigger: CCTCCGTCCAGCTCTCTCCAAGAACAGCTGACACCA...AAGTCTGTGACTTAACGTCTTCAAGTATGGCATATTGTCATCAAGACGTGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| 3UTR CCA 72 bp | ATAGCATGCAGTAAATCCATGTCCAGCCTCCATGCTTaGCTTGAAGTCTCACCACCATTTCAGCCTGAATAT | + |
|
Preference number: 3 (lower is better) Translates to: IACSKSMSSLHA*LEVSPPFQPEY Trigger: ATATTCAGGCTGAAATGGTGGTGAGACTTCAAGCCAAGCATGGAGGCTGGACATGGATTTACTGCATGCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| 3UTR CCA 72 bp | CTTGAAGACGTTAAGTCACAGACTTATTCAAAACGTTaGTTCCCCTCCACTTCCATCTTCATGGAAGCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LEDVKSQTYSKR*FPSTSIFMEAV Trigger: GACAGCTTCCATGAAGATGGAAGTGGAGGGGAACCAACGTTTTGAATAAGTCTGTGACTTAACGTCTTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGAGTCCGTCGGAATTGAAATCCCGTTACTGGTTTGTAGAGAATTCTACGTGATCGCTCGAAGTCTCTaGATTTTAAAAAGTTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: AESVGIEIPLLVCREFYVIARSL*ILKSCS Trigger: GGAGCAACTTTTTAAAATCAAGAGACTTCGAGCGAT...CACGTAGAATTCTCTACAAACCAGTAACGGGATTTCAATTCCGACGGACTCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| 3UTR-3UTR CAA 90 bp | CGTCTTGATGACAATATGCCATACTTGAAGACGTTAAGTCACAGACTTATTCAATGGAAGAAACTTTGCTaGACTGGAGAGGCCTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: RLDDNMPYLKTLSHRLIQWKKLC*TGEASG Trigger: ACCTGAGGCCTCTCCAGTCAAGCAAAGTTTCTTCCA...TTGAATAAGTCTGTGACTTAACGTCTTCAAGTATGGCATATTGTCATCAAGACG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTCCACGTCTTGATGACAATATGCCATACTTGAAGACGTTAAGTCACAGACTTGACAATATGCCATACTaGAAGACGTTAAGTCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: APRLDDNMPYLKTLSHRLDNMPY*KTLSHR Trigger: TCTGTGACTTAACGTCTTCAAGTATGGCATATTGTC...AAGTCTGTGACTTAACGTCTTCAAGTATGGCATATTGTCATCAAGACGTGGAGC 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
||
| CDS-3UTR TCA 90 bp | ACCGCAGCACCACGAGGTGGCCACCTGGGCAAGCCTAGGCGGTCTGGCGGCCGGGAGAGGCCTCAGGTGTaGGCAGGCCTTCGGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: TAAPRGGHLGKPRRSGGRERPQV*AGLRAP Trigger: TGGTGCCCGAAGGCCTGCTCACACCTGAGGCCTCTC...CCGGCCGCCAGACCGCCTAGGCTTGCCCAGGTGGCCACCTCGTGGTGCTGCGGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR TCA 90 bp | ACCGCAGCACCACGAGGTGGCCACCTGGGCAAGCCTAGGCGGTCTGGCGGCCGGAGTGCCAGCCTCAGCTaGGAAGGGCCTGTCCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: TAAPRGGHLGKPRRSGGRSASLS*EGPVHA Trigger: GGCGTGGACAGGCCCTTCTCAGCTGAGGCTGGCACT...CCGGCCGCCAGACCGCCTAGGCTTGCCCAGGTGGCCACCTCGTGGTGCTGCGGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR TCA 90 bp | ACCGCAGCACCACGAGGTGGCCACCTGGGCAAGCCTAGGCGGTCTGGCGGCCGGCAGGTTGTTGCAAGGTaGCAGGGTCCCTCCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TAAPRGGHLGKPRRSGGRQVVAR*QGPSWD Trigger: GTCCCAGGAGGGACCCTGTCACCTTGCAACAACCTG...CCGGCCGCCAGACCGCCTAGGCTTGCCCAGGTGGCCACCTCGTGGTGCTGCGGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CCA 90 bp | ACCGCAGCACCACGAGGTGGCCACCTGGGCAAGCCTAGGCGGTCTGGCGGCCGGGGCATGGTGAGCTGCTaGCGCACAGTGAGATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TAAPRGGHLGKPRRSGGRGMVSC*RTVRWS Trigger: TGACCATCTCACTGTGCGCCAGCAGCTCACCATGCC...CCGGCCGCCAGACCGCCTAGGCTTGCCCAGGTGGCCACCTCGTGGTGCTGCGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR GCA 90 bp | CAGGCGCGGGGCGCAAAAGTCACAGGAAGAGCCGCCAGGGCGGCAGAGTCCGTCGAGGGCATGGTGAGCTaGTGGCGCACAGTGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: QARGAKVTGRAARAAESVEGMVS*WRTVRW Trigger: CCATCTCACTGTGCGCCAGCAGCTCACCATGCCCTC...GACGGACTCTGCCGCCCTGGCGGCTCTTCCTGTGACTTTTGCGCCCCGCGCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR GCA 90 bp | CAGGCGCGGGGCGCAAAAGTCACAGGAAGAGCCGCCAGGGCGGCAGAGTCCGTCGAACACAGGGTTTCCTaGCCAGTAGGCCCCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QARGAKVTGRAARAAESVEHRVS*PVGPRW Trigger: CCACCTGGGGCCTACTGGGCAGGAAACCCTGTGTTC...GACGGACTCTGCCGCCCTGGCGGCTCTTCCTGTGACTTTTGCGCCCCGCGCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCGCGGGGCGCAAAAGTCACAGGAAGAGCCGCCAGGGCGGCAGAGTCCGTCCCAGTAGGCCCCAGGTaGGTGAGCATGGAATCGACC | + |
|
Preference number: 4 (lower is better) Translates to: QARGAKVTGRAARAAESVPVGPR*VSMEST Trigger: GGTCGATTCCATGCTCACCCACCTGGGGCCTACTGG...GACGGACTCTGCCGCCCTGGCGGCTCTTCCTGTGACTTTTGCGCCCCGCGCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CCA 90 bp | AGGCGCGGGGCGCAAAAGTCACAGGAAGAGCCGCCAGGGCGGCAGAGTCCGTCGGCCGGCTCTGGAACATaGCCAGGAAGAGAGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRGAQKSQEEPPGRQSPSAGSGT*PGREKQ Trigger: CTGCTTCTCTCTTCCTGGCCATGTTCCAGAGCCGGC...CGACGGACTCTGCCGCCCTGGCGGCTCTTCCTGTGACTTTTGCGCCCCGCGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCGCGGGGCGCAAAAGTCACAGGAAGAGCCGCCAGGGCGGCAGAGTCCGTCTCAGAGTTTAGCTGCTaGCGGAGGCTCCAGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QARGAKVTGRAARAAESVSEFSC*RRLQAS Trigger: GGAAGCCTGGAGCCTCCGCCAGCAGCTAAACTCTGA...GACGGACTCTGCCGCCCTGGCGGCTCTTCCTGTGACTTTTGCGCCCCGCGCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR GCA 90 bp | AGGCGCGGGGCGCAAAAGTCACAGGAAGAGCCGCCAGGGCGGCAGAGTCCGTCGCTGGGAATGTGGCAGTaGTGGGAAGTAGCTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRGAQKSQEEPPGRQSPSLGMWQ*WEVAGQ Trigger: CTGACCAGCTACTTCCCAGCACTGCCACATTCCCAG...CGACGGACTCTGCCGCCCTGGCGGCTCTTCCTGTGACTTTTGCGCCCCGCGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR TCA 90 bp | CAGGCGCGGGGCGCAAAAGTCACAGGAAGAGCCGCCAGGGCGGCAGAGTCCGTCATGTCTTCAAGCTCTTaGGCAGAGAGAAGCCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QARGAKVTGRAARAAESVMSSSS*AERSPV Trigger: CACCGGGCTTCTCTCTGCTCAAGAGCTTGAAGACAT...GACGGACTCTGCCGCCCTGGCGGCTCTTCCTGTGACTTTTGCGCCCCGCGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CCA 90 bp | CAAATCCTTGCTCAGGTCTGCTTGGAGGGAAGGCTCAGGCCTAGCAGGGAATGGGCCAGGGCGGGGTCTTaGCTCCAGTGGGGCGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QILAQVCLEGRLRPSREWARAGS*LQWGAE Trigger: TTCTGCGCCCCACTGGAGCCAAGACCCCGCCCTGGC...CCATTCCCTGCTAGGCCTGAGCCTTCCCTCCAAGCAGACCTGAGCAAGGATTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| CDS-3UTR CCA 90 bp | GAGCCGCCAGGGCGGCAGAGTCCGTCGGAATTGAAATCCCGTTACTGGTTTGTAGGAGTCAGCTGCTCATaGGCGGGGCTGCCCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EPPGRQSPSELKSRYWFVGVSCS*AGLPRG Trigger: GCCTCTGGGCAGCCCCGCCCATGAGCAGCTGACTCC...TACAAACCAGTAACGGGATTTCAATTCCGACGGACTCTGCCGCCCTGGCGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR TCA 90 bp | CAGCGCGGTGAGGAAGTGAGACTCCCCCATTCTCCGCTTGAAATCCATTCAAGGAGGGGGCCCCGGAGCTaGGCTAGGGCCAGGAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QRGEEVRLPHSPLEIHSRRGPRS*ARARSV Trigger: TACACTCCTGGCCCTAGCTCAGCTCCGGGGCCCCCT...CCTTGAATGGATTTCAAGCGGAGAATGGGGGAGTCTCACTTCCTCACCGCGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR TCA 90 bp | GAGCCGCCAGGGCGGCAGAGTCCGTCGGAATTGAAATCCCGTTACTGGTTTGTAGGGCGCAGAAAGCGGTaGACACAGGGTTTCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: EPPGRQSPSELKSRYWFVGRRKR*TQGFLP Trigger: GGGCAGGAAACCCTGTGTTCACCGCTTTCTGCGCCC...TACAAACCAGTAACGGGATTTCAATTCCGACGGACTCTGCCGCCCTGGCGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CCA 90 bp | AGGCGCGGGGCGCAAAAGTCACAGGAAGAGCCGCCAGGGCGGCAGAGTCCGTCGGGTCTTCAAAGCTTCTaGCTGAGCTTTCTGTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: RRGAQKSQEEPPGRQSPSGLQSF*LSFLST Trigger: AGTTGACAGAAAGCTCAGCCAGAAGCTTTGAAGACC...CGACGGACTCTGCCGCCCTGGCGGCTCTTCCTGTGACTTTTGCGCCCCGCGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CCA 90 bp | TACTGGTTTGTAGAGAATTCTACGTGGGTGTCAAGAGCCCCTCGGGGCACAGGCATCTCGGCGTTGATCTaGTCGCGGCGCGCCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YWFVENSTWVSRAPRGTGISALI*SRRALE Trigger: CTCCAAGGCGCGCCGCGACCAGATCAACGCCGAGAT...GCCTGTGCCCCGAGGGGCTCTTGACACCCACGTAGAATTCTCTACAAACCAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR CCA 90 bp | AGTCTTGGTAGGATTGGGGCTCAGTTGCTCTGGGAAGGTTTGGCTGGGGCTGTTATCTCGGCGTTGATCTaGTCGCGGCGCGCCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLGRIGAQLLWEGLAGAVISALI*SRRALE Trigger: CTCCAAGGCGCGCCGCGACCAGATCAACGCCGAGAT...AACAGCCCCAGCCAAACCTTCCCAGAGCAACTGAGCCCCAATCCTACCAAGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| CDS-3UTR TCA 90 bp | ACCAAATCCTTGCTCAGGTCTGCTTGGAGGGAAGGCTCAGGCCTAGCAGGGAATGCTGCTGGCGCACAGTaGGATGGTCAGCAGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TKSLLRSAWREGSGLAGNAAGAQ*DGQQGQ Trigger: TTGACCCTGCTGACCATCTCACTGTGCGCCAGCAGC...ATTCCCTGCTAGGCCTGAGCCTTCCCTCCAAGCAGACCTGAGCAAGGATTTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTGCCCAGAGGCTCTGGGAATGTGGCAGTGCTGGGAAGTAGCTGGTCAGGGCAAAGAAGACACCCTTaGGAGTGTAGATGCAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLPRGSGNVAVLGSSWSGQRRHP*ECRCRQ Trigger: TTGCCTGCATCTACACTCGCAAGGGTGTCTTCTTTG...CCCTGACCAGCTACTTCCCAGCACTGCCACATTCCCAGAGCCTCTGGGCAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| CDS-3UTR GCA 90 bp | ACCAAATCCTTGCTCAGGTCTGCTTGGAGGGAAGGCTCAGGCCTAGCAGGGAATGAACACAGGGTTTCCTaGCCAGTAGGCCCCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TKSLLRSAWREGSGLAGNEHRVS*PVGPRW Trigger: CCACCTGGGGCCTACTGGGCAGGAAACCCTGTGTTC...ATTCCCTGCTAGGCCTGAGCCTTCCCTCCAAGCAGACCTGAGCAAGGATTTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| CDS-3UTR GCA 90 bp | GGGTGGAGAGCGGCTCCACGTCTTGATGACAATATGCCATACTTGAAGACGTTACTGGGAGGAGTCAGCTaGTCATGGGCGGGGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GWRAAPRLDDNMPYLKTLLGGVS*SWAGLP Trigger: GGGCAGCCCCGCCCATGAGCAGCTGACTCCTCCCAG...TAACGTCTTCAAGTATGGCATATTGTCATCAAGACGTGGAGCCGCTCTCCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR CCA 90 bp | TGGTGTCAGCTGTTCTTGGAGAGAGCTGGACGGAGGGGGCAAGTGAGTCTGGAAGCCGGCTCTGGAACATaGCCAGGAAGAGAGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WCQLFLERAGRRGQVSLEAGSGT*PGREKQ Trigger: CTGCTTCTCTCTTCCTGGCCATGTTCCAGAGCCGGC...TTCCAGACTCACTTGCCCCCTCCGTCCAGCTCTCTCCAAGAACAGCTGACACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| CDS-3UTR CCA 90 bp | CCGTTACTGGTTTGTAGAGAATTCTACGTGGGTGTCAAGAGCCCCTCGGGGCACGAAGGCACAGCCTCCTaGCTGGTGGGGTGTGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLLVCREFYVGVKSPSGHEGTAS*LVGCVR Trigger: CCTTACACACCCCACCAGCCAGGAGGCTGTGCCTTC...GTGCCCCGAGGGGCTCTTGACACCCACGTAGAATTCTCTACAAACCAGTAACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CCA 90 bp | GAGCCGCCAGGGCGGCAGAGTCCGTCGGAATTGAAATCCCGTTACTGGTTTGTAGTTCTTGGAGAGAGCTaGACGGAGGGGGCAAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EPPGRQSPSELKSRYWFVVLGES*TEGASE Trigger: CTCACTTGCCCCCTCCGTCCAGCTCTCTCCAAGAAC...TACAAACCAGTAACGGGATTTCAATTCCGACGGACTCTGCCGCCCTGGCGGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR TCA 90 bp | ACTTGGGGGCAACTTCTCATAGAGAAAACTGCATCCCTCCTGGGCGAAGTAAGTTCCGAATCTCGGCGTTaGTCTGGTCGCGGCGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TWGQLLIEKTASLLGEVSSESRR*SGRGAP Trigger: AGGCGCGCCGCGACCAGATCAACGCCGAGATTCGGA...ACTTACTTCGCCCAGGAGGGATGCAGTTTTCTCTATGAGAAGTTGCCCCCAAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| CDS-3UTR TCA 90 bp | GGGAAGCTGGCACTTCTAGGAGTCCCCAGGGATGGTGTAAAGAGTGGATTAGAGACGGCAGCAGCTCCTTaGGGTTCCGAATCTCGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GKLALLGVPRDGVKSGLETAAAP*GSESRR Trigger: ACGCCGAGATTCGGAACCTCAAGGAGCTGCTGCCGT...CTCTAATCCACTCTTTACACCATCCCTGGGGACTCCTAGAAGTGCCAGCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| CDS-3UTR TCA 90 bp | CAGCGCGGTGAGGAAGTGAGACTCCCCCATTCTCCGCTTGAAATCCATTCAAGGCACCAGTTTGTTTCCTaGACTCTGGCGCCGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QRGEEVRLPHSPLEIHSRHQFVS*TLAPEG Trigger: TCCCTCCGGCGCCAGAGTTCAGGAAACAAACTGGTG...CCTTGAATGGATTTCAAGCGGAGAATGGGGGAGTCTCACTTCCTCACCGCGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR TCA 90 bp | CAGCGCGGTGAGGAAGTGAGACTCCCCCATTCTCCGCTTGAAATCCATTCAAGGCTGGGGCTGTTCAGATaGGCCTGGAATGCTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QRGEEVRLPHSPLEIHSRLGLFR*AWNAVL Trigger: CAGCACAGCATTCCAGGCTCATCTGAACAGCCCCAG...CCTTGAATGGATTTCAAGCGGAGAATGGGGGAGTCTCACTTCCTCACCGCGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR GCA 90 bp | CAGCGCGGTGAGGAAGTGAGACTCCCCCATTCTCCGCTTGAAATCCATTCAAGGCTGGGGACAGGTTGTTaGAAGGTGACAGGGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QRGEEVRLPHSPLEIHSRLGTGC*KVTGSL Trigger: GAGGGACCCTGTCACCTTGCAACAACCTGTCCCCAG...CCTTGAATGGATTTCAAGCGGAGAATGGGGGAGTCTCACTTCCTCACCGCGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR CCA 90 bp | GAGCCGCCAGGGCGGCAGAGTCCGTCGGAATTGAAATCCCGTTACTGGTTTGTAAGGTCCACCATAGAGTaGCCCAGATGCTCGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: EPPGRQSPSELKSRYWFVRSTIE*PRCSLT Trigger: TGTGAGCGAGCATCTGGGCCACTCTATGGTGGACCT...TACAAACCAGTAACGGGATTTCAATTCCGACGGACTCTGCCGCCCTGGCGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR CCA 90 bp | CAAATCCTTGCTCAGGTCTGCTTGGAGGGAAGGCTCAGGCCTAGCAGGGAATGGAGGTCCACCATAGAGTaGCCCAGATGCTCGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: QILAQVCLEGRLRPSREWRSTIE*PRCSLT Trigger: TGTGAGCGAGCATCTGGGCCACTCTATGGTGGACCT...CCATTCCCTGCTAGGCCTGAGCCTTCCCTCCAAGCAGACCTGAGCAAGGATTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| CDS-3UTR CCA 90 bp | ACTGGACTTTATTATAAAGTTGGCTACAAAGTCACCGCAGCACCACGAGGTGGCGCCAGGGCGGGGTCTTaGCTCCAGTGGGGCGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TGLYYKVGYKVTAAPRGGARAGS*LQWGAE Trigger: TTCTGCGCCCCACTGGAGCCAAGACCCCGCCCTGGC...GCCACCTCGTGGTGCTGCGGTGACTTTGTAGCCAACTTTATAATAAAGTCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CCA 90 bp | CAGCGCGGTGAGGAAGTGAGACTCCCCCATTCTCCGCTTGAAATCCATTCAAGGGGTGTCAGCTGTTCTTaGAGAGAGCTGGACGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QRGEEVRLPHSPLEIHSRGVSCS*RELDGG Trigger: CCCTCCGTCCAGCTCTCTCCAAGAACAGCTGACACC...CCTTGAATGGATTTCAAGCGGAGAATGGGGGAGTCTCACTTCCTCACCGCGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| 3UTR CAA 72 bp | CCAGCTCTTTGGAGGGTTGGGGAAGCTCTTCTGGTGTaGAGATCACACCTAGTTCAGGAGCCCTGGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PALWRVGEALLV*RSHLVQEPWGS Trigger: GCTTCCCCAGGGCTCCTGAACTAGGTGTGATCTCAACACCAGAAGAGCTTCCCCAACCCTCCAAAGAGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| 3UTR CAA 72 bp | AGGTGGAGTACACACCAAATCCTTGCTCAGGTCTGCTaGGAGGGAAGGCTCAGGCCTAGCAGGGAATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RWSTHQILAQVC*EGRLRPSREWQ Trigger: CTGCCATTCCCTGCTAGGCCTGAGCCTTCCCTCCAAGCAGACCTGAGCAAGGATTTGGTGTGTACTCCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| CDS-3UTR TCA 90 bp | TACTGGTTTGTAGAGAATTCTACGTGGGTGTCAAGAGCCCCTCGGGGCACAGGCTGCAGGCAAGACTCATaGTGTGCAGGTAGGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YWFVENSTWVSRAPRGTGCRQDS*CAGRTA Trigger: GGCTGTCCTACCTGCACATCATGAGTCTTGCCTGCA...GCCTGTGCCCCGAGGGGCTCTTGACACCCACGTAGAATTCTCTACAAACCAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR TCA 90 bp | GAGCCGCCAGGGCGGCAGAGTCCGTCGGAATTGAAATCCCGTTACTGGTTTGTAGGGACTTGGAGGTGTTaGATCGACAACGGAAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EPPGRQSPSELKSRYWFVGTWRC*IDNGKG Trigger: GCCTTTTCCGTTGTCGATTCAACACCTCCAAGTCCC...TACAAACCAGTAACGGGATTTCAATTCCGACGGACTCTGCCGCCCTGGCGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR TCA 90 bp | ACTTGGGGGCAACTTCTCATAGAGAAAACTGCATCCCTCCTGGGCGAAGTAAGTGGGCGCAGAAAGCGGTaGACACAGGGTTTCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TWGQLLIEKTASLLGEVSGRRKR*TQGFLP Trigger: GGGCAGGAAACCCTGTGTTCACCGCTTTCTGCGCCC...ACTTACTTCGCCCAGGAGGGATGCAGTTTTCTCTATGAGAAGTTGCCCCCAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| CDS-3UTR GCA 90 bp | GGTTTCATAGGTGGCCAAGTCCTCCAGGAAGCTGTGATCTTCTGGGGACAGGTTGCTAGGTCCTTAGCATaGCGGCTCTGGAACATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GFIGGQVLQEAVIFWGQVARSLA*RLWNMA Trigger: GGCCATGTTCCAGAGCCGGCATGCTAAGGACCTAGC...AACCTGTCCCCAGAAGATCACAGCTTCCTGGAGGACTTGGCCACCTATGAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| CDS-3UTR GCA 90 bp | CCGTTACTGGTTTGTAGAGAATTCTACGTGGGTGTCAAGAGCCCCTCGGGGCACTCTTCAGAGTTTAGCTaGTGGCGGAGGCTCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLLVCREFYVGVKSPSGHSSEFS*WRRLQA Trigger: AGCCTGGAGCCTCCGCCAGCAGCTAAACTCTGAAGA...GTGCCCCGAGGGGCTCTTGACACCCACGTAGAATTCTCTACAAACCAGTAACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR CCA 90 bp | CAGCGCGGTGAGGAAGTGAGACTCCCCCATTCTCCGCTTGAAATCCATTCAAGGTTGCTCAGGTCTGCTTaGAGGGAAGGCTCAGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: QRGEEVRLPHSPLEIHSRLLRSA*REGSGL Trigger: TAGGCCTGAGCCTTCCCTCCAAGCAGACCTGAGCAA...CCTTGAATGGATTTCAAGCGGAGAATGGGGGAGTCTCACTTCCTCACCGCGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR CCA 90 bp | CTGGACTTTATTATAAAGTTGGCTACAAAGTCACCGCAGCACCACGAGGTGGCCGCTGCCCAGAGGCTCTaGGAATGTGGCAGTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LDFIIKLATKSPQHHEVAAAQRL*ECGSAG Trigger: CCCAGCACTGCCACATTCCCAGAGCCTCTGGGCAGC...GGCCACCTCGTGGTGCTGCGGTGACTTTGTAGCCAACTTTATAATAAAGTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| 3UTR CAA 72 bp | CTGGGCGAAGTAAGTCTTGGTAGGATTGGGGCTCAGTaGCTCTGGGAAGGTTTGGCTGGGGCTGTTCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LGEVSLGRIGAQ*LWEGLAGAVQM Trigger: CATCTGAACAGCCCCAGCCAAACCTTCCCAGAGCAACTGAGCCCCAATCCTACCAAGACTTACTTCGCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| CDS-3UTR TCA 90 bp | GCAGAGTCCGTCGGAATTGAAATCCCGTTACTGGTTTGTAGAGAATTCTACGTGTCCGAATCTCGGCGTTaGTCTGGTCGCGGCGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AESVGIEIPLLVCREFYVSESRR*SGRGAP Trigger: AGGCGCGCCGCGACCAGATCAACGCCGAGATTCGGA...CACGTAGAATTCTCTACAAACCAGTAACGGGATTTCAATTCCGACGGACTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR TCA 90 bp | AATCCATGTCCAGCCTCCATGCTTGGCTTGAAGTCTCACCACCATTTCAGCCTGCACCAGTTTGTTTCCTaGACTCTGGCGCCGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NPCPASMLGLKSHHHFSLHQFVS*TLAPEG Trigger: TCCCTCCGGCGCCAGAGTTCAGGAAACAAACTGGTG...CAGGCTGAAATGGTGGTGAGACTTCAAGCCAAGCATGGAGGCTGGACATGGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| CDS-3UTR CCA 90 bp | AAACTCACTACGAGTGAATACAGATTGAAATGGAAACTGGGATCGCTCGAAGTCGGTCGCGGCGCGCCTTaGAGGCGCCCTTGGTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: KLTTSEYRLKWKLGSLEVGRGAP*RRPWWI Trigger: GATCCACCAAGGGCGCCTCCAAGGCGCGCCGCGACC...GACTTCGAGCGATCCCAGTTTCCATTTCAATCTGTATTCACTCGTAGTGAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR CCA 90 bp | CAAATCCTTGCTCAGGTCTGCTTGGAGGGAAGGCTCAGGCCTAGCAGGGAATGGTGGCGCACAGTGAGATaGTCAGCAGGGTCAATGATA | + |
|
Preference number: 4 (lower is better) Translates to: QILAQVCLEGRLRPSREWWRTVR*SAGSMI Trigger: TATCATTGACCCTGCTGACCATCTCACTGTGCGCCA...CCATTCCCTGCTAGGCCTGAGCCTTCCCTCCAAGCAGACCTGAGCAAGGATTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| CDS-3UTR CCA 90 bp | CCAGGCTTCCGTGTCACTGATAGGGTAGTTATTGGCAGTAAAAGGGCCTTCTGGGGCATGGTGAGCTGCTaGCGCACAGTGAGATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGFRVTDRVVIGSKRAFWGMVSC*RTVRWS Trigger: TGACCATCTCACTGTGCGCCAGCAGCTCACCATGCC...CCAGAAGGCCCTTTTACTGCCAATAACTACCCTATCAGTGACACGGAAGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| CDS-3UTR CCA 90 bp | TACTGGTTTGTAGAGAATTCTACGTGGGTGTCAAGAGCCCCTCGGGGCACAGGCAGGGCTGCTAGGACTTaGGGGCAACTTCTCATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: YWFVENSTWVSRAPRGTGRAART*GQLLIE Trigger: CTCTATGAGAAGTTGCCCCCAAGTCCTAGCAGCCCT...GCCTGTGCCCCGAGGGGCTCTTGACACCCACGTAGAATTCTCTACAAACCAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| 3UTR CAA 72 bp | CAGGAAGAGCCGCCAGGGCGGCAGAGTCCGTCGGAATaGAAATCCCGTTACTGGTTTGTAGAGAATTCTACG | + |
|
Preference number: 4 (lower is better) Translates to: QEEPPGRQSPSE*KSRYWFVENST Trigger: CGTAGAATTCTCTACAAACCAGTAACGGGATTTCAATTCCGACGGACTCTGCCGCCCTGGCGGCTCTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR TCA 90 bp | TACTGGTTTGTAGAGAATTCTACGTGGGTGTCAAGAGCCCCTCGGGGCACAGGCCCTCCATGCTTGGCTTaGAGTCTCACCACCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YWFVENSTWVSRAPRGTGPPCLA*SLTTIS Trigger: TGAAATGGTGGTGAGACTTCAAGCCAAGCATGGAGG...GCCTGTGCCCCGAGGGGCTCTTGACACCCACGTAGAATTCTCTACAAACCAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR CCA 90 bp | ATTGGGGTCTGGAGTAGAAAGATCCATGAAGATGTCTTCCACTGGCGTCTCTTCCCAGTAGGCCCCAGGTaGGTGAGCATGGAATCGACC | + |
|
Preference number: 4 (lower is better) Translates to: IGVWSRKIHEDVFHWRLFPVGPR*VSMEST Trigger: GGTCGATTCCATGCTCACCCACCTGGGGCCTACTGG...GAAGAGACGCCAGTGGAAGACATCTTCATGGATCTTTCTACTCCAGACCCCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| CDS-3UTR CCA 90 bp | TACTGGTTTGTAGAGAATTCTACGTGGGTGTCAAGAGCCCCTCGGGGCACAGGCGAAACTTTGCTTGACTaGAGAGGCCTCAGGTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YWFVENSTWVSRAPRGTGETLLD*RGLRCE Trigger: CTCACACCTGAGGCCTCTCCAGTCAAGCAAAGTTTC...GCCTGTGCCCCGAGGGGCTCTTGACACCCACGTAGAATTCTCTACAAACCAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| 3UTR CAA 72 bp | TTCAGAGAAAGTCACTGTACTTGGTGTCAGCTGTTCTaGGAGAGAGCTGGACGGAGGGGGCAAGTGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FRESHCTWCQLF*ERAGRRGQVSL Trigger: CAGACTCACTTGCCCCCTCCGTCCAGCTCTCTCCAAGAACAGCTGACACCAAGTACAGTGACTTTCTCTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| CDS-3UTR TCA 90 bp | GCAGAGTCCGTCGGAATTGAAATCCCGTTACTGGTTTGTAGAGAATTCTACGTGACGGCAGCAGCTCCTTaGGGTTCCGAATCTCGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: AESVGIEIPLLVCREFYVTAAAP*GSESRR Trigger: ACGCCGAGATTCGGAACCTCAAGGAGCTGCTGCCGT...CACGTAGAATTCTCTACAAACCAGTAACGGGATTTCAATTCCGACGGACTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR TCA 90 bp | GGGTCTGGGAAGGTAGCACTGCTGGGTGTCAACTGTTCAGAGAAAGTCACTGTAGGGACTTGGAGGTGTTaGATCGACAACGGAAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSGKVALLGVNCSEKVTVGTWRC*IDNGKG Trigger: GCCTTTTCCGTTGTCGATTCAACACCTCCAAGTCCC...TACAGTGACTTTCTCTGAACAGTTGACACCCAGCAGTGCTACCTTCCCAGACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| CDS-3UTR TCA 90 bp | GCAGAGTCCGTCGGAATTGAAATCCCGTTACTGGTTTGTAGAGAATTCTACGTGGACGGAGGGGGCAAGTaGGTCTGGAAGGGTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: AESVGIEIPLLVCREFYVDGGGK*VWKGSW Trigger: CCATGAACCCTTCCAGACTCACTTGCCCCCTCCGTC...CACGTAGAATTCTCTACAAACCAGTAACGGGATTTCAATTCCGACGGACTCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR GCA 90 bp | CAGCGCGGTGAGGAAGTGAGACTCCCCCATTCTCCGCTTGAAATCCATTCAAGGCAAAGAAGACACCCTTaGGAGTGTAGATGCAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QRGEEVRLPHSPLEIHSRQRRHP*ECRCRQ Trigger: TTGCCTGCATCTACACTCGCAAGGGTGTCTTCTTTG...CCTTGAATGGATTTCAAGCGGAGAATGGGGGAGTCTCACTTCCTCACCGCGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR GCA 90 bp | CTAAATCCTTCAGGGCCTGGAGAATCAGATATATCCCCCTCTGGCCCCCAGAATTACAGAGCAGTTCGCTaGGCTCAAAGCCCAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LNPSGPGESDISPSGPQNYRAVR*AQSPGR Trigger: TCTACCTGGGCTTTGAGCGCAGCGAACTGCTCTGTA...ATTCTGGGGGCCAGAGGGGGATATATCTGATTCTCCAGGCCCTGAAGGATTTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR GCA 90 bp | CCGTTACTGGTTTGTAGAGAATTCTACGTGGGTGTCAAGAGCCCCTCGGGGCACTCTCATAGAGAAAACTaGATCCCTCCTGGGCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PLLVCREFYVGVKSPSGHSHREN*IPPGRS Trigger: ACTTCGCCCAGGAGGGATGCAGTTTTCTCTATGAGA...GTGCCCCGAGGGGCTCTTGACACCCACGTAGAATTCTCTACAAACCAGTAACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CCA 90 bp | GGAATTGAAATCCCGTTACTGGTTTGTAGAGAATTCTACGTGGGTGTCAAGAGCCAGAGAGAAGCCCGGTaGGGCCAGCCAAAGGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GIEIPLLVCREFYVGVKSQREAR*GQPKEC Trigger: GCACTCCTTTGGCTGGCCCCACCGGGCTTCTCTCTG...GCTCTTGACACCCACGTAGAATTCTCTACAAACCAGTAACGGGATTTCAATTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR TCA 90 bp | GGAATTGAAATCCCGTTACTGGTTTGTAGAGAATTCTACGTGGGTGTCAAGAGCGCTGCTGGCGCACAGTaGGATGGTCAGCAGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GIEIPLLVCREFYVGVKSAAGAQ*DGQQGQ Trigger: TTGACCCTGCTGACCATCTCACTGTGCGCCAGCAGC...GCTCTTGACACCCACGTAGAATTCTCTACAAACCAGTAACGGGATTTCAATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR TCA 90 bp | GCTCCACGTCTTGATGACAATATGCCATACTTGAAGACGTTAAGTCACAGACTTAGGGGGTCCAGCCCCTaGCAGGGACAGGTTAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: APRLDDNMPYLKTLSHRLRGSSP*QGQVRV Trigger: AACCCTAACCTGTCCCTGTCAGGGGCTGGACCCCCT...AAGTCTGTGACTTAACGTCTTCAAGTATGGCATATTGTCATCAAGACGTGGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR GCA 90 bp | CTTTCTGTCAACTGTCCTTGTAGTGAACTGGTTAGTGGGTCTGGGAAGGTAGCAATAGAGTGGCCCAGATaGTCGCTCACACTCTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSVNCPCSELVSGSGKVAIEWPR*SLTLSD Trigger: GTCGGAGAGTGTGAGCGAGCATCTGGGCCACTCTAT...TGCTACCTTCCCAGACCCACTAACCAGTTCACTACAAGGACAGTTGACAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| CDS-3UTR GCA 90 bp | GAGCCGCCAGGGCGGCAGAGTCCGTCGGAATTGAAATCCCGTTACTGGTTTGTACTTCTGAGTATAGCATaGAGTAAATCCATGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EPPGRQSPSELKSRYWFVLLSIA*SKSMSS Trigger: GCTGGACATGGATTTACTGCATGCTATACTCAGAAG...TACAAACCAGTAACGGGATTTCAATTCCGACGGACTCTGCCGCCCTGGCGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CCA 90 bp | CGTCTTGATGACAATATGCCATACTTGAAGACGTTAAGTCACAGACTTATTCAAGGTCGCGGCGCGCCTTaGAGGCGCCCTTGGTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: RLDDNMPYLKTLSHRLIQGRGAP*RRPWWI Trigger: GATCCACCAAGGGCGCCTCCAAGGCGCGCCGCGACC...TTGAATAAGTCTGTGACTTAACGTCTTCAAGTATGGCATATTGTCATCAAGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| CDS-3UTR CCA 90 bp | ATTGGGGTCTGGAGTAGAAAGATCCATGAAGATGTCTTCCACTGGCGTCTCTTCTTGTTTCCTGAACTCTaGCGCCGGAGGGACTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IGVWSRKIHEDVFHWRLFLFPEL*RRRDLE Trigger: CTCCAAGTCCCTCCGGCGCCAGAGTTCAGGAAACAA...GAAGAGACGCCAGTGGAAGACATCTTCATGGATCTTTCTACTCCAGACCCCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| CDS-3UTR CCA 90 bp | TACTGGTTTGTAGAGAATTCTACGTGGGTGTCAAGAGCCCCTCGGGGCACAGGCTTCCCCATTGGGGTCTaGAGTAGAAAGATCCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: YWFVENSTWVSRAPRGTGFPIGV*SRKIHE Trigger: TTCATGGATCTTTCTACTCCAGACCCCAATGGGGAA...GCCTGTGCCCCGAGGGGCTCTTGACACCCACGTAGAATTCTCTACAAACCAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| 3UTR CAA 72 bp | TGCTGGGTGTCAACTGTTCAGAGAAAGTCACTGTACTaGGTGTCAGCTGTTCTTGGAGAGAGCTGGACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CWVSTVQRKSLY*VSAVLGESWTE Trigger: CTCCGTCCAGCTCTCTCCAAGAACAGCTGACACCAAGTACAGTGACTTTCTCTGAACAGTTGACACCCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGCTGTCTTGAACTTGGCTCTGGAGTTGATGCAACTCATCAGCAAACCCTTATGTCTTCAAGCTCTTaGGCAGAGAGAAGCCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSCLELGSGVDATHQQTLMSSSS*AERSPV Trigger: CACCGGGCTTCTCTCTGCTCAAGAGCTTGAAGACAT...AAGGGTTTGCTGATGAGTTGCATCAACTCCAGAGCCAAGTTCAAGACAGCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| CDS-3UTR TCA 90 bp | CTAAATCCTTCAGGGCCTGGAGAATCAGATATATCCCCCTCTGGCCCCCAGAATTTCAAAGCTTCTGGCTaGGCTTTCTGTCAACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LNPSGPGESDISPSGPQNFKASG*AFCQLS Trigger: GGACAGTTGACAGAAAGCTCAGCCAGAAGCTTTGAA...ATTCTGGGGGCCAGAGGGGGATATATCTGATTCTCCAGGCCCTGAAGGATTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CCA 90 bp | CTAAATCCTTCAGGGCCTGGAGAATCAGATATATCCCCCTCTGGCCCCCAGAATAGGAGTCCCCAGGGATaGTGTAAAGAGTGGATTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LNPSGPGESDISPSGPQNRSPQG*CKEWIR Trigger: TCTAATCCACTCTTTACACCATCCCTGGGGACTCCT...ATTCTGGGGGCCAGAGGGGGATATATCTGATTCTCCAGGCCCTGAAGGATTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CCA 90 bp | GGGTGGAGAGCGGCTCCACGTCTTGATGACAATATGCCATACTTGAAGACGTTAGTCCTTGTAGTGAACTaGTTAGTGGGTCTGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GWRAAPRLDDNMPYLKTLVLVVN*LVGLGR Trigger: CCTTCCCAGACCCACTAACCAGTTCACTACAAGGAC...TAACGTCTTCAAGTATGGCATATTGTCATCAAGACGTGGAGCCGCTCTCCACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| 3UTR CAA 72 bp | GATGCAACTCATCAGCAAACCCTTCGTAGGGGAATGTaGAGACACCTGTCTCAAAGGCGGTTTCATAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DATHQQTLRRGM*RHLSQRRFHRW Trigger: CCACCTATGAAACCGCCTTTGAGACAGGTGTCTCAACATTCCCCTACGAAGGGTTTGCTGATGAGTTGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| 3UTR CAA 72 bp | CCCTCCACTTCCATCTTCATGGAAGCTGTCTTGAACTaGGCTCTGGAGTTGATGCAACTCATCAGCAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: PSTSIFMEAVLN*ALELMQLISKP Trigger: GGGTTTGCTGATGAGTTGCATCAACTCCAGAGCCAAGTTCAAGACAGCTTCCATGAAGATGGAAGTGGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| CDS-3UTR TCA 90 bp | CTGGACTTTATTATAAAGTTGGCTACAAAGTCACCGCAGCACCACGAGGTGGCCACCACCATTTCAGCCTaGATATCTCCACTTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LDFIIKLATKSPQHHEVATTISA*ISPLSA Trigger: GGCTGAAAGTGGAGATATTCAGGCTGAAATGGTGGT...GGCCACCTCGTGGTGCTGCGGTGACTTTGTAGCCAACTTTATAATAAAGTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR GCA 90 bp | GGAATTGAAATCCCGTTACTGGTTTGTAGAGAATTCTACGTGGGTGTCAAGAGCATAGAGTGGCCCAGATaGTCGCTCACACTCTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: GIEIPLLVCREFYVGVKSIEWPR*SLTLSD Trigger: GTCGGAGAGTGTGAGCGAGCATCTGGGCCACTCTAT...GCTCTTGACACCCACGTAGAATTCTCTACAAACCAGTAACGGGATTTCAATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR GCA 90 bp | AAACTCACTACGAGTGAATACAGATTGAAATGGAAACTGGGATCGCTCGAAGTCGCTAGGTCCTTAGCATaGCGGCTCTGGAACATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KLTTSEYRLKWKLGSLEVARSLA*RLWNMA Trigger: GGCCATGTTCCAGAGCCGGCATGCTAAGGACCTAGC...GACTTCGAGCGATCCCAGTTTCCATTTCAATCTGTATTCACTCGTAGTGAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR GCA 90 bp | GGAATTGAAATCCCGTTACTGGTTTGTAGAGAATTCTACGTGGGTGTCAAGAGCCAGATGAGCCTGGAATaGTGTGCTGGGAGGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GIEIPLLVCREFYVGVKSQMSLE*CAGRSQ Trigger: CTGACTCCTCCCAGCACAGCATTCCAGGCTCATCTG...GCTCTTGACACCCACGTAGAATTCTCTACAAACCAGTAACGGGATTTCAATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR GCA 90 bp | GGAATTGAAATCCCGTTACTGGTTTGTAGAGAATTCTACGTGGGTGTCAAGAGCGGATTGGGGCTCAGTTaGTCTGGGAAGGTTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GIEIPLLVCREFYVGVKSGLGLS*SGKVWL Trigger: CAGCCAAACCTTCCCAGAGCAACTGAGCCCCAATCC...GCTCTTGACACCCACGTAGAATTCTCTACAAACCAGTAACGGGATTTCAATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CCA 90 bp | CTAAATCCTTCAGGGCCTGGAGAATCAGATATATCCCCCTCTGGCCCCCAGAATGGATGGTGTAAAGAGTaGATTAGAGCATTGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LNPSGPGESDISPSGPQNGWCKE*IRALLL Trigger: CAGGAGCAATGCTCTAATCCACTCTTTACACCATCC...ATTCTGGGGGCCAGAGGGGGATATATCTGATTCTCCAGGCCCTGAAGGATTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CCA 90 bp | GGAATTGAAATCCCGTTACTGGTTTGTAGAGAATTCTACGTGGGTGTCAAGAGCCTGGGAAGGTTTGGCTaGGGCTGTTCAGATGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GIEIPLLVCREFYVGVKSLGRFG*GCSDEP Trigger: AGGCTCATCTGAACAGCCCCAGCCAAACCTTCCCAG...GCTCTTGACACCCACGTAGAATTCTCTACAAACCAGTAACGGGATTTCAATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CCA 90 bp | CATTCTCCGCTTGAAATCCATTCAAGGAAACTCACTACGAGTGAATACAGATTGGGGGCTCAGTTGCTCTaGGAAGGTTTGGCTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HSPLEIHSRKLTTSEYRLGAQLL*EGLAGA Trigger: AGCCCCAGCCAAACCTTCCCAGAGCAACTGAGCCCC...CAATCTGTATTCACTCGTAGTGAGTTTCCTTGAATGGATTTCAAGCGGAGAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CCA 90 bp | GGAATTGAAATCCCGTTACTGGTTTGTAGAGAATTCTACGTGGGTGTCAAGAGCAGGCGGTTTCATAGGTaGCCAAGTCCTCCAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GIEIPLLVCREFYVGVKSRRFHR*PSPPGS Trigger: GCTTCCTGGAGGACTTGGCCACCTATGAAACCGCCT...GCTCTTGACACCCACGTAGAATTCTCTACAAACCAGTAACGGGATTTCAATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| 3UTR CAA 72 bp | CATGCAGTAAATCCATGTCCAGCCTCCATGCTTGGCTaGAAGTCTCACCACCATTTCAGCCTGAATATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HAVNPCPASMLG*KSHHHFSLNIS Trigger: GGAGATATTCAGGCTGAAATGGTGGTGAGACTTCAAGCCAAGCATGGAGGCTGGACATGGATTTACTGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| CDS-3UTR GCA 90 bp | AAACTCACTACGAGTGAATACAGATTGAAATGGAAACTGGGATCGCTCGAAGTCATCCTTGCTCAGGTCTaGTTGGAGGGAAGGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLTTSEYRLKWKLGSLEVILAQV*LEGRLR Trigger: CCTGAGCCTTCCCTCCAAGCAGACCTGAGCAAGGAT...GACTTCGAGCGATCCCAGTTTCCATTTCAATCTGTATTCACTCGTAGTGAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR CCA 90 bp | GCAGAGTCCGTCGGAATTGAAATCCCGTTACTGGTTTGTAGAGAATTCTACGTGTGGCGCACAGTGAGATaGTCAGCAGGGTCAATGATA | + |
|
Preference number: 4 (lower is better) Translates to: AESVGIEIPLLVCREFYVWRTVR*SAGSMI Trigger: TATCATTGACCCTGCTGACCATCTCACTGTGCGCCA...CACGTAGAATTCTCTACAAACCAGTAACGGGATTTCAATTCCGACGGACTCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR CCA 90 bp | AAACTCACTACGAGTGAATACAGATTGAAATGGAAACTGGGATCGCTCGAAGTCTTGTTTCCTGAACTCTaGCGCCGGAGGGACTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KLTTSEYRLKWKLGSLEVLFPEL*RRRDLE Trigger: CTCCAAGTCCCTCCGGCGCCAGAGTTCAGGAAACAA...GACTTCGAGCGATCCCAGTTTCCATTTCAATCTGTATTCACTCGTAGTGAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR CCA 90 bp | CTGGACTTTATTATAAAGTTGGCTACAAAGTCACCGCAGCACCACGAGGTGGCCTTAGAGCATTGCTCCTaGGAGAAGACATTCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LDFIIKLATKSPQHHEVALEHCS*EKTFSE Trigger: CTCTGAGAATGTCTTCTCCCAGGAGCAATGCTCTAA...GGCCACCTCGTGGTGCTGCGGTGACTTTGTAGCCAACTTTATAATAAAGTCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR CCA 90 bp | AAACTCACTACGAGTGAATACAGATTGAAATGGAAACTGGGATCGCTCGAAGTCCCTGGAATGCTGTGCTaGGAGGAGTCAGCTGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLTTSEYRLKWKLGSLEVPGMLC*EESAAH Trigger: ATGAGCAGCTGACTCCTCCCAGCACAGCATTCCAGG...GACTTCGAGCGATCCCAGTTTCCATTTCAATCTGTATTCACTCGTAGTGAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR TCA 90 bp | AAACTCACTACGAGTGAATACAGATTGAAATGGAAACTGGGATCGCTCGAAGTCGGAATGGCAGGTAACTaGAGTCCAGCTCTTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLTTSEYRLKWKLGSLEVGMAGN*SPALWR Trigger: CCTCCAAAGAGCTGGACTTCAGTTACCTGCCATTCC...GACTTCGAGCGATCCCAGTTTCCATTTCAATCTGTATTCACTCGTAGTGAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR TCA 90 bp | AAACTCACTACGAGTGAATACAGATTGAAATGGAAACTGGGATCGCTCGAAGTCGGAAGAAACTTTGCTTaGCTGGAGAGGCCTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KLTTSEYRLKWKLGSLEVGRNFA*LERPQV Trigger: CACCTGAGGCCTCTCCAGTCAAGCAAAGTTTCTTCC...GACTTCGAGCGATCCCAGTTTCCATTTCAATCTGTATTCACTCGTAGTGAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR CCA 90 bp | AAACTCACTACGAGTGAATACAGATTGAAATGGAAACTGGGATCGCTCGAAGTCAGGCCTAGCAGGGAATaGCAGGTAACTGAAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KLTTSEYRLKWKLGSLEVRPSRE*QVTEVQ Trigger: CTGGACTTCAGTTACCTGCCATTCCCTGCTAGGCCT...GACTTCGAGCGATCCCAGTTTCCATTTCAATCTGTATTCACTCGTAGTGAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CCA 90 bp | GCAGAGTCCGTCGGAATTGAAATCCCGTTACTGGTTTGTAGAGAATTCTACGTGGTGGGGTGTGTAAGGTaGAGTACACACCAAATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AESVGIEIPLLVCREFYVVGCVR*STHQIL Trigger: AAGGATTTGGTGTGTACTCCACCTTACACACCCCAC...CACGTAGAATTCTCTACAAACCAGTAACGGGATTTCAATTCCGACGGACTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR TCA 90 bp | GCTCCACGTCTTGATGACAATATGCCATACTTGAAGACGTTAAGTCACAGACTTACTTGGCTCTGGAGTTaGTGCAACTCATCAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: APRLDDNMPYLKTLSHRLTWLWS*CNSSAN Trigger: GTTTGCTGATGAGTTGCATCAACTCCAGAGCCAAGT...AAGTCTGTGACTTAACGTCTTCAAGTATGGCATATTGTCATCAAGACGTGGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR CCA 90 bp | ATCCATTCAAGGAAACTCACTACGAGTGAATACAGATTGAAATGGAAACTGGGAAGCTCTTTGGAGGGTTaGGGAAGCTCTTCTGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IHSRKLTTSEYRLKWKLGSSLEG*GSSSGV Trigger: AACACCAGAAGAGCTTCCCCAACCCTCCAAAGAGCT...TCCCAGTTTCCATTTCAATCTGTATTCACTCGTAGTGAGTTTCCTTGAATGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CCA 90 bp | CATTCTCCGCTTGAAATCCATTCAAGGAAACTCACTACGAGTGAATACAGATTGAGGAAGTCCAGCTCCTaGCATTTCCAGGGTTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HSPLEIHSRKLTTSEYRLRKSSS*HFQGLR Trigger: TCTTAAACCCTGGAAATGCCAGGAGCTGGACTTCCT...CAATCTGTATTCACTCGTAGTGAGTTTCCTTGAATGGATTTCAAGCGGAGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR TCA 90 bp | CATTCTCCGCTTGAAATCCATTCAAGGAAACTCACTACGAGTGAATACAGATTGAACTGGCTGATCTGCTaGATGAGACGATCTATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HSPLEIHSRKLTTSEYRLNWLIC*MRRSIS Trigger: TGAGATAGATCGTCTCATTCAGCAGATCAGCCAGTT...CAATCTGTATTCACTCGTAGTGAGTTTCCTTGAATGGATTTCAAGCGGAGAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CCA 90 bp | CATTCTCCGCTTGAAATCCATTCAAGGAAACTCACTACGAGTGAATACAGATTGGAAAGTCACTGTACTTaGTGTCAGCTGTTCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HSPLEIHSRKLTTSEYRLESHCT*CQLFLE Trigger: CTCCAAGAACAGCTGACACCAAGTACAGTGACTTTC...CAATCTGTATTCACTCGTAGTGAGTTTCCTTGAATGGATTTCAAGCGGAGAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CCA 90 bp | ATCCATTCAAGGAAACTCACTACGAGTGAATACAGATTGAAATGGAAACTGGGAGTGCATGGAGTCAACTaGTCTTCAAAGCTTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IHSRKLTTSEYRLKWKLGVHGVN*SSKLLA Trigger: AGCCAGAAGCTTTGAAGACCAGTTGACTCCATGCAC...TCCCAGTTTCCATTTCAATCTGTATTCACTCGTAGTGAGTTTCCTTGAATGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| 3UTR CAA 72 bp | AGAGCGGCTCCACGTCTTGATGACAATATGCCATACTaGAAGACGTTAAGTCACAGACTTATTCAAAACGTT | + |
|
Preference number: 4 (lower is better) Translates to: RAAPRLDDNMPY*KTLSHRLIQNV Trigger: AACGTTTTGAATAAGTCTGTGACTTAACGTCTTCAAGTATGGCATATTGTCATCAAGACGTGGAGCCGCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| CDS-3UTR CAA 90 bp | AGGCGCGGGGCGCAAAAGTCACAGGAAGAGCCGCCAGGGCGGCAGAGTCCGTCGTGGTCGCGGCGCGCCTaGGAGGCGCCCTTGGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RRGAQKSQEEPPGRQSPSWSRRA*EAPLVD Trigger: ATCCACCAAGGGCGCCTCCAAGGCGCGCCGCGACCA...CGACGGACTCTGCCGCCCTGGCGGCTCTTCCTGTGACTTTTGCGCCCCGCGCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CAA 90 bp | AGGCGCGGGGCGCAAAAGTCACAGGAAGAGCCGCCAGGGCGGCAGAGTCCGTCGAGGATTGGGGCTCAGTaGCTCTGGGAAGGTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RRGAQKSQEEPPGRQSPSRIGAQ*LWEGLA Trigger: AGCCAAACCTTCCCAGAGCAACTGAGCCCCAATCCT...CGACGGACTCTGCCGCCCTGGCGGCTCTTCCTGTGACTTTTGCGCCCCGCGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CAA 90 bp | AGGCGCGGGGCGCAAAAGTCACAGGAAGAGCCGCCAGGGCGGCAGAGTCCGTCGTCTTCTGGGGACAGGTaGTTGCAAGGTGACAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RRGAQKSQEEPPGRQSPSSSGDR*LQGDRV Trigger: GACCCTGTCACCTTGCAACAACCTGTCCCCAGAAGA...CGACGGACTCTGCCGCCCTGGCGGCTCTTCCTGTGACTTTTGCGCCCCGCGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CAA 90 bp | ACCGCAGCACCACGAGGTGGCCACCTGGGCAAGCCTAGGCGGTCTGGCGGCCGGGAAGCTGTCTTGAACTaGGCTCTGGAGTTGATGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TAAPRGGHLGKPRRSGGREAVLN*ALELMQ Trigger: TTGCATCAACTCCAGAGCCAAGTTCAAGACAGCTTC...CCGGCCGCCAGACCGCCTAGGCTTGCCCAGGTGGCCACCTCGTGGTGCTGCGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS GCA 90 bp | TCTTGGCTCCAGTGGGGCGCAGAAAGCGGTGAACACAGGGTTTCCTaGCCAGTAGGCCCCAGGTGGGTGAGCATGGAATCGACCTCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SWLQWGAESGEHRVS*PVGPRWVSMESTSN Trigger: ATTCGAGGTCGATTCCATGCTCACCCACCTGGGGCCTACTGGGCAGGAAACCCTGTGTTCACCGCTTTCTGCGCCCCACTGGAGCCAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
||
| CDS-3UTR CAA 90 bp | AATCCATGTCCAGCCTCCATGCTTGGCTTGAAGTCTCACCACCATTTCAGCCTGTGGTCGCGGCGCGCCTaGGAGGCGCCCTTGGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NPCPASMLGLKSHHHFSLWSRRA*EAPLVD Trigger: ATCCACCAAGGGCGCCTCCAAGGCGCGCCGCGACCA...CAGGCTGAAATGGTGGTGAGACTTCAAGCCAAGCATGGAGGCTGGACATGGATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| CDS CCA 90 bp | CTTTCAGAAACGTCCAGTAGGGCTAGGTCCTTAGCATGCCGGCTCTaGAACATGGCCAGGAAGAGAGAAGCAGGACCAGGGCCAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSETSSRARSLACRL*NMARKREAGPGPGP Trigger: TGGCCCTGGCCCTGGTCCTGCTTCTCTCTTCCTGGCCATGTTCCAGAGCCGGCATGCTAAGGACCTAGCCCTACTGGACGTTTCTGAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
||
| CDS CCA 90 bp | GTGCTGCCACAATGTCTTCAAGCTCTTGAGCAGAGAGAAGCCCGGTaGGGCCAGCCAAAGGAGTGCCTCCAGCAAAGAAGACACCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VLPQCLQALEQREAR*GQPKECLQQRRHPC Trigger: GCAAGGGTGTCTTCTTTGCTGGAGGCACTCCTTTGGCTGGCCCCACCGGGCTTCTCTCTGCTCAAGAGCTTGAAGACATTGTGGCAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
||
| CDS-3UTR CAA 90 bp | CCGTTACTGGTTTGTAGAGAATTCTACGTGGGTGTCAAGAGCCCCTCGGGGCACCTTGCTCAGGTCTGCTaGGAGGGAAGGCTCAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PLLVCREFYVGVKSPSGHLAQVC*EGRLRP Trigger: AGGCCTGAGCCTTCCCTCCAAGCAGACCTGAGCAAG...GTGCCCCGAGGGGCTCTTGACACCCACGTAGAATTCTCTACAAACCAGTAACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR CAA 90 bp | GAGCCGCCAGGGCGGCAGAGTCCGTCGGAATTGAAATCCCGTTACTGGTTTGTATGGTGTCAGCTGTTCTaGGAGAGAGCTGGACGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EPPGRQSPSELKSRYWFVWCQLF*ERAGRR Trigger: CCTCCGTCCAGCTCTCTCCAAGAACAGCTGACACCA...TACAAACCAGTAACGGGATTTCAATTCCGACGGACTCTGCCGCCCTGGCGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CAA 90 bp | CAGCGCGGTGAGGAAGTGAGACTCCCCCATTCTCCGCTTGAAATCCATTCAAGGTCTGGGGACAGGTTGTaGCAAGGTGACAGGGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: QRGEEVRLPHSPLEIHSRSGDRL*QGDRVP Trigger: AGGGACCCTGTCACCTTGCAACAACCTGTCCCCAGA...CCTTGAATGGATTTCAAGCGGAGAATGGGGGAGTCTCACTTCCTCACCGCGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS TCA 90 bp | CAGCAAAGAAGACACCCTTGCGAGTGTAGATGCAGGCAAGACTCATaGTGTGCAGGTAGGACAGCCGGACCTTGTCCGCTTCAGCCAACG | + |
|
Preference number: 5 (lower is better) Translates to: QQRRHPCECRCRQDS*CAGRTAGPCPLQPT Trigger: CGTTGGCTGAAGCGGACAAGGTCCGGCTGTCCTACCTGCACATCATGAGTCTTGCCTGCATCTACACTCGCAAGGGTGTCTTCTTTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
||
| CDS TCA 90 bp | CCAGTTTGTTTCCTGAACTCTGGCGCCGGAGGGACTTGGAGGTGTTaGATCGACAACGGAAAAGGCGATCAGCATCCAGAGCAGAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PVCFLNSGAGGTWRC*IDNGKGDQHPEQRA Trigger: TGCCCTCTGCTCTGGATGCTGATCGCCTTTTCCGTTGTCGATTCAACACCTCCAAGTCCCTCCGGCGCCAGAGTTCAGGAAACAAACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
||
| CDS CCA 90 bp | GCAGAAAGCGGTGAACACAGGGTTTCCTGCCCAGTAGGCCCCAGGTaGGTGAGCATGGAATCGACCTCGAATAAGCACCAGTTTGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AESGEHRVSCPVGPR*VSMESTSNKHQFVS Trigger: GGAAACAAACTGGTGCTTATTCGAGGTCGATTCCATGCTCACCCACCTGGGGCCTACTGGGCAGGAAACCCTGTGTTCACCGCTTTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
||
| CDS-3UTR CAA 90 bp | TACTGGTTTGTAGAGAATTCTACGTGGGTGTCAAGAGCCCCTCGGGGCACAGGCCAGCTCTTTGGAGGGTaGGGGAAGCTCTTCTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: YWFVENSTWVSRAPRGTGQLFGG*GKLFWC Trigger: ACACCAGAAGAGCTTCCCCAACCCTCCAAAGAGCTG...GCCTGTGCCCCGAGGGGCTCTTGACACCCACGTAGAATTCTCTACAAACCAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS GCA 90 bp | ATTAGGACACTTTCAGAAACGTCCAGTAGGGCTAGGTCCTTAGCATaGCGGCTCTGGAACATGGCCAGGAAGAGAGAAGCAGGACCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: IRTLSETSSRARSLA*RLWNMARKREAGPG Trigger: CCCTGGTCCTGCTTCTCTCTTCCTGGCCATGTTCCAGAGCCGGCATGCTAAGGACCTAGCCCTACTGGACGTTTCTGAAAGTGTCCTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CAA 90 bp | CTAAATCCTTCAGGGCCTGGAGAATCAGATATATCCCCCTCTGGCCCCCAGAATTGGCGCCGGAGGGACTaGGAGGTGTTGAATCGACAA | + |
|
Preference number: 5 (lower is better) Translates to: LNPSGPGESDISPSGPQNWRRRD*EVLNRQ Trigger: TTGTCGATTCAACACCTCCAAGTCCCTCCGGCGCCA...ATTCTGGGGGCCAGAGGGGGATATATCTGATTCTCCAGGCCCTGAAGGATTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CAA 90 bp | CCCATTGGGGTCTGGAGTAGAAAGATCCATGAAGATGTCTTCCACTGGCGTCTCTGGCGCCGGAGGGACTaGGAGGTGTTGAATCGACAA | + |
|
Preference number: 5 (lower is better) Translates to: PIGVWSRKIHEDVFHWRLWRRRD*EVLNRQ Trigger: TTGTCGATTCAACACCTCCAAGTCCCTCCGGCGCCA...GAGACGCCAGTGGAAGACATCTTCATGGATCTTTCTACTCCAGACCCCAATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| CDS-3UTR CAA 90 bp | TGGTGTCAGCTGTTCTTGGAGAGAGCTGGACGGAGGGGGCAAGTGAGTCTGGAACGAATAAGCACCAGTTaGTTTCCTGAACTCTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: WCQLFLERAGRRGQVSLERISTS*FPELWR Trigger: GCGCCAGAGTTCAGGAAACAAACTGGTGCTTATTCG...TTCCAGACTCACTTGCCCCCTCCGTCCAGCTCTCTCCAAGAACAGCTGACACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
||
| CDS-3UTR CAA 90 bp | CCGTTACTGGTTTGTAGAGAATTCTACGTGGGTGTCAAGAGCCCCTCGGGGCACCTTCGTAGGGGAATGTaGAGACACCTGTCTCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PLLVCREFYVGVKSPSGHLRRGM*RHLSQR Trigger: CCTTTGAGACAGGTGTCTCAACATTCCCCTACGAAG...GTGCCCCGAGGGGCTCTTGACACCCACGTAGAATTCTCTACAAACCAGTAACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS CCA 90 bp | GCATGGAATCGACCTCGAATAAGCACCAGTTTGTTTCCTGAACTCTaGCGCCGGAGGGACTTGGAGGTGTTGAATCGACAACGGAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: AWNRPRISTSLFPEL*RRRDLEVLNRQRKR Trigger: CCTTTTCCGTTGTCGATTCAACACCTCCAAGTCCCTCCGGCGCCAGAGTTCAGGAAACAAACTGGTGCTTATTCGAGGTCGATTCCATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
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| CDS-3UTR CAA 90 bp | CTGGACTTTATTATAAAGTTGGCTACAAAGTCACCGCAGCACCACGAGGTGGCCCAACAGGCGGTAGTGTaGAGAAGAAGCTTGGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LDFIIKLATKSPQHHEVAQQAVV*RRSLGQ Trigger: CTGGCCCAAGCTTCTTCTCAACACTACCGCCTGTTG...GGCCACCTCGTGGTGCTGCGGTGACTTTGTAGCCAACTTTATAATAAAGTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CAA 90 bp | TACTGGTTTGTAGAGAATTCTACGTGGGTGTCAAGAGCCCCTCGGGGCACAGGCGAAGCTCTTCTGGTGTaGAGATCACACCTAGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: YWFVENSTWVSRAPRGTGEALLV*RSHLVQ Trigger: CTGAACTAGGTGTGATCTCAACACCAGAAGAGCTTC...GCCTGTGCCCCGAGGGGCTCTTGACACCCACGTAGAATTCTCTACAAACCAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS GCA 90 bp | CCTCGGGGTGTAGCAGTCCATACCATGATTTACAGAGCAGTTCGCTaGGCTCAAAGCCCAGGTAGATTAGGACACTTTCAGAAACGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PRGVAVHTMIYRAVR*AQSPGRLGHFQKRP Trigger: TGGACGTTTCTGAAAGTGTCCTAATCTACCTGGGCTTTGAGCGCAGCGAACTGCTCTGTAAATCATGGTATGGACTGCTACACCCCGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CAA 90 bp | ACTGGACTTTATTATAAAGTTGGCTACAAAGTCACCGCAGCACCACGAGGTGGCCTGAAGTCCAGCTCTTaGGAGGGTTGGGGAAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TGLYYKVGYKVTAAPRGGLKSSS*EGWGSS Trigger: AGAGCTTCCCCAACCCTCCAAAGAGCTGGACTTCAG...GCCACCTCGTGGTGCTGCGGTGACTTTGTAGCCAACTTTATAATAAAGTCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR CAA 90 bp | GGGTGGAGAGCGGCTCCACGTCTTGATGACAATATGCCATACTTGAAGACGTTAAATGTCTTCAAGCTCTaGAGCAGAGAGAAGCCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: GWRAAPRLDDNMPYLKTLNVFKL*SREKPG Trigger: ACCGGGCTTCTCTCTGCTCAAGAGCTTGAAGACATT...TAACGTCTTCAAGTATGGCATATTGTCATCAAGACGTGGAGCCGCTCTCCACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
||
| CDS-3UTR CAA 90 bp | CTGGACTTTATTATAAAGTTGGCTACAAAGTCACCGCAGCACCACGAGGTGGCCAGGGACTTGGAGGTGTaGAATCGACAACGGAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LDFIIKLATKSPQHHEVARDLEV*NRQRKR Trigger: CCTTTTCCGTTGTCGATTCAACACCTCCAAGTCCCT...GGCCACCTCGTGGTGCTGCGGTGACTTTGTAGCCAACTTTATAATAAAGTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR CAA 90 bp | CTAAATCCTTCAGGGCCTGGAGAATCAGATATATCCCCCTCTGGCCCCCAGAATGAGTGGATTAGAGCATaGCTCCTGGGAGAAGACATT | + |
|
Preference number: 5 (lower is better) Translates to: LNPSGPGESDISPSGPQNEWIRA*LLGEDI Trigger: AATGTCTTCTCCCAGGAGCAATGCTCTAATCCACTC...ATTCTGGGGGCCAGAGGGGGATATATCTGATTCTCCAGGCCCTGAAGGATTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR CAA 90 bp | ACTGGACTTTATTATAAAGTTGGCTACAAAGTCACCGCAGCACCACGAGGTGGCTGGAAGAAACTTTGCTaGACTGGAGAGGCCTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: TGLYYKVGYKVTAAPRGGWKKLC*TGEASG Trigger: ACCTGAGGCCTCTCCAGTCAAGCAAAGTTTCTTCCA...GCCACCTCGTGGTGCTGCGGTGACTTTGTAGCCAACTTTATAATAAAGTCCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR CAA 90 bp | AAACTCACTACGAGTGAATACAGATTGAAATGGAAACTGGGATCGCTCGAAGTCGTACACACCAAATCCTaGCTCAGGTCTGCTTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KLTTSEYRLKWKLGSLEVVHTKS*LRSAWR Trigger: CCTCCAAGCAGACCTGAGCAAGGATTTGGTGTGTAC...GACTTCGAGCGATCCCAGTTTCCATTTCAATCTGTATTCACTCGTAGTGAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS CCA 90 bp | CTTCTGAGTATAGCATGCAGTAAATCCATGTCCAGCCTCCATGCTTaGCTTGAAGTCTCACCACCATTTCAGCCTGAATATCTCCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLSIACSKSMSSLHA*LEVSPPFQPEYLHF Trigger: AAAGTGGAGATATTCAGGCTGAAATGGTGGTGAGACTTCAAGCCAAGCATGGAGGCTGGACATGGATTTACTGCATGCTATACTCAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR CAA 90 bp | GCTCCACGTCTTGATGACAATATGCCATACTTGAAGACGTTAAGTCACAGACTTCGAATAAGCACCAGTTaGTTTCCTGAACTCTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: APRLDDNMPYLKTLSHRLRISTS*FPELWR Trigger: GCGCCAGAGTTCAGGAAACAAACTGGTGCTTATTCG...AAGTCTGTGACTTAACGTCTTCAAGTATGGCATATTGTCATCAAGACGTGGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
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| CDS-3UTR CAA 90 bp | GGAATTGAAATCCCGTTACTGGTTTGTAGAGAATTCTACGTGGGTGTCAAGAGCAGAAAGTCACTGTACTaGGTGTCAGCTGTTCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GIEIPLLVCREFYVGVKSRKSLY*VSAVLG Trigger: TCCAAGAACAGCTGACACCAAGTACAGTGACTTTCT...GCTCTTGACACCCACGTAGAATTCTCTACAAACCAGTAACGGGATTTCAATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR CAA 90 bp | CATTCTCCGCTTGAAATCCATTCAAGGAAACTCACTACGAGTGAATACAGATTGTTCATGGAAGCTGTCTaGAACTTGGCTCTGGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HSPLEIHSRKLTTSEYRLFMEAV*NLALEL Trigger: CAACTCCAGAGCCAAGTTCAAGACAGCTTCCATGAA...CAATCTGTATTCACTCGTAGTGAGTTTCCTTGAATGGATTTCAAGCGGAGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS-3UTR CAA 90 bp | CGTCTTGATGACAATATGCCATACTTGAAGACGTTAAGTCACAGACTTATTCAAAATGTCTTCAAGCTCTaGAGCAGAGAGAAGCCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: RLDDNMPYLKTLSHRLIQNVFKL*SREKPG Trigger: ACCGGGCTTCTCTCTGCTCAAGAGCTTGAAGACATT...TTGAATAAGTCTGTGACTTAACGTCTTCAAGTATGGCATATTGTCATCAAGACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237881.2 |
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| CDS-3UTR CAA 90 bp | ATCCATTCAAGGAAACTCACTACGAGTGAATACAGATTGAAATGGAAACTGGGAACGATCTATCTCATTTaGCTCTTTCTCTGTGTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: IHSRKLTTSEYRLKWKLGTIYLI*LFLCVV Trigger: CACTACACAGAGAAAGAGCAAAATGAGATAGATCGT...TCCCAGTTTCCATTTCAATCTGTATTCACTCGTAGTGAGTTTCCTTGAATGGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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| CDS CCA 72 bp | GCCAGGGCCGGGGCCAGGGCGGGGTCTTGGCTCCAGTaGGGCGCAGAAAGCGGTGAACACAGGGTTTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ARAGARAGSWLQ*GAESGEHRVSC Trigger: GCAGGAAACCCTGTGTTCACCGCTTTCTGCGCCCCACTGGAGCCAAGACCCCGCCCTGGCCCCGGCCCTGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
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| CDS CAA 72 bp | AACGGCAGCAGCTCCTTGAGGTTCCGAATCTCGGCGTaGATCTGGTCGCGGCGCGCCTTGGAGGCGCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: NGSSSLRFRISA*IWSRRALEAPL Trigger: CAAGGGCGCCTCCAAGGCGCGCCGCGACCAGATCAACGCCGAGATTCGGAACCTCAAGGAGCTGCTGCCGTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
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| CDS CCA 72 bp | AGCAGCTCCTTGAGGTTCCGAATCTCGGCGTTGATCTaGTCGCGGCGCGCCTTGGAGGCGCCCTTGGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SSSLRFRISALI*SRRALEAPLVD Trigger: ATCCACCAAGGGCGCCTCCAAGGCGCGCCGCGACCAGATCAACGCCGAGATTCGGAACCTCAAGGAGCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
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| CDS GCA 72 bp | CAGTGGGGCGCAGAAAGCGGTGAACACAGGGTTTCCTaGCCAGTAGGCCCCAGGTGGGTGAGCATGGAATCG | + |
|
Preference number: 6 (lower is better) Translates to: QWGAESGEHRVS*PVGPRWVSMES Trigger: CGATTCCATGCTCACCCACCTGGGGCCTACTGGGCAGGAAACCCTGTGTTCACCGCTTTCTGCGCCCCACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
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| CDS GCA 72 bp | AGGCGATCAGCATCCAGAGCAGAGGGCATGGTGAGCTaGTGGCGCACAGTGAGATGGTCAGCAGGGTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: RRSASRAEGMVS*WRTVRWSAGSM Trigger: CATTGACCCTGCTGACCATCTCACTGTGCGCCAGCAGCTCACCATGCCCTCTGCTCTGGATGCTGATCGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
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| CDS CCA 72 bp | ACGTCCAGTAGGGCTAGGTCCTTAGCATGCCGGCTCTaGAACATGGCCAGGAAGAGAGAAGCAGGACCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: TSSRARSLACRL*NMARKREAGPG Trigger: CCCTGGTCCTGCTTCTCTCTTCCTGGCCATGTTCCAGAGCCGGCATGCTAAGGACCTAGCCCTACTGGACGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
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| CDS CCA 72 bp | GGTGAACACAGGGTTTCCTGCCCAGTAGGCCCCAGGTaGGTGAGCATGGAATCGACCTCGAATAAGCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: GEHRVSCPVGPR*VSMESTSNKHQ Trigger: CTGGTGCTTATTCGAGGTCGATTCCATGCTCACCCACCTGGGGCCTACTGGGCAGGAAACCCTGTGTTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
||
| CDS CCA 72 bp | CGATCAGCATCCAGAGCAGAGGGCATGGTGAGCTGCTaGCGCACAGTGAGATGGTCAGCAGGGTCAATGATA | + |
|
Preference number: 6 (lower is better) Translates to: RSASRAEGMVSC*RTVRWSAGSMI Trigger: TATCATTGACCCTGCTGACCATCTCACTGTGCGCCAGCAGCTCACCATGCCCTCTGCTCTGGATGCTGATCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
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| CDS CAA 90 bp | ACCAGTTTGTTTCCTGAACTCTGGCGCCGGAGGGACTTGGAGGTGTaGAATCGACAACGGAAAAGGCGATCAGCATCCAGAGCAGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TSLFPELWRRRDLEV*NRQRKRRSASRAEG Trigger: GCCCTCTGCTCTGGATGCTGATCGCCTTTTCCGTTGTCGATTCAACACCTCCAAGTCCCTCCGGCGCCAGAGTTCAGGAAACAAACTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
||
| CDS TCA 72 bp | AGACACCCTTGCGAGTGTAGATGCAGGCAAGACTCATaGTGTGCAGGTAGGACAGCCGGACCTTGTCCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RHPCECRCRQDS*CAGRTAGPCPL Trigger: AAGCGGACAAGGTCCGGCTGTCCTACCTGCACATCATGAGTCTTGCCTGCATCTACACTCGCAAGGGTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
||
| CDS TCA 72 bp | AATCCAGGTAGTGCTGCCACAATGTCTTCAAGCTCTTaGGCAGAGAGAAGCCCGGTGGGGCCAGCCAAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: NPGSAATMSSSS*AERSPVGPAKG Trigger: TCCTTTGGCTGGCCCCACCGGGCTTCTCTCTGCTCAAGAGCTTGAAGACATTGTGGCAGCACTACCTGGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
||
| CDS TCA 72 bp | TTCCTGAACTCTGGCGCCGGAGGGACTTGGAGGTGTTaGATCGACAACGGAAAAGGCGATCAGCATCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: FLNSGAGGTWRC*IDNGKGDQHPE Trigger: CTCTGGATGCTGATCGCCTTTTCCGTTGTCGATTCAACACCTCCAAGTCCCTCCGGCGCCAGAGTTCAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
||
| CDS GCA 72 bp | CTTTCAGAAACGTCCAGTAGGGCTAGGTCCTTAGCATaGCGGCTCTGGAACATGGCCAGGAAGAGAGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LSETSSRARSLA*RLWNMARKREA Trigger: TGCTTCTCTCTTCCTGGCCATGTTCCAGAGCCGGCATGCTAAGGACCTAGCCCTACTGGACGTTTCTGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
||
| CDS CAA 72 bp | TTTCCTGAACTCTGGCGCCGGAGGGACTTGGAGGTGTaGAATCGACAACGGAAAAGGCGATCAGCATCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: FPELWRRRDLEV*NRQRKRRSASR Trigger: TCTGGATGCTGATCGCCTTTTCCGTTGTCGATTCAACACCTCCAAGTCCCTCCGGCGCCAGAGTTCAGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
||
| CDS CCA 72 bp | CGACCTCGAATAAGCACCAGTTTGTTTCCTGAACTCTaGCGCCGGAGGGACTTGGAGGTGTTGAATCGACAA | + |
|
Preference number: 6 (lower is better) Translates to: RPRISTSLFPEL*RRRDLEVLNRQ Trigger: TTGTCGATTCAACACCTCCAAGTCCCTCCGGCGCCAGAGTTCAGGAAACAAACTGGTGCTTATTCGAGGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
||
| CDS CAA 72 bp | ACCAGTTTGTTTCCTGAACTCTGGCGCCGGAGGGACTaGGAGGTGTTGAATCGACAACGGAAAAGGCGATCA | + |
|
Preference number: 6 (lower is better) Translates to: TSLFPELWRRRD*EVLNRQRKRRS Trigger: TGATCGCCTTTTCCGTTGTCGATTCAACACCTCCAAGTCCCTCCGGCGCCAGAGTTCAGGAAACAAACTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
||
| CDS CAA 90 bp | CGAATAAGCACCAGTTTGTTTCCTGAACTCTGGCGCCGGAGGGACTaGGAGGTGTTGAATCGACAACGGAAAAGGCGATCAGCATCCAGA | + |
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Preference number: 6 (lower is better) Translates to: RISTSLFPELWRRRD*EVLNRQRKRRSASR Trigger: TCTGGATGCTGATCGCCTTTTCCGTTGTCGATTCAACACCTCCAAGTCCCTCCGGCGCCAGAGTTCAGGAAACAAACTGGTGCTTATTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
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| CDS TCA 72 bp | CACTCTCCGACAGGTATAGCAACTTCCCCTCAGCTGTaGATACAAGGAGAAATCCAGGTAGTGCTGCCACAA | + |
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Preference number: 6 (lower is better) Translates to: HSPTGIATSPQL*IQGEIQVVLPQ Trigger: TTGTGGCAGCACTACCTGGATTTCTCCTTGTATTCACAGCTGAGGGGAAGTTGCTATACCTGTCGGAGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056129.9 ENSMUST00000237881.2 |
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| CDS GCA 72 bp | GTAGCAGTCCATACCATGATTTACAGAGCAGTTCGCTaGGCTCAAAGCCCAGGTAGATTAGGACACTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: VAVHTMIYRAVR*AQSPGRLGHFQ Trigger: CTGAAAGTGTCCTAATCTACCTGGGCTTTGAGCGCAGCGAACTGCTCTGTAAATCATGGTATGGACTGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056129.9 |
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