Pregenerated sensors for NOXRED1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072919Ensembl transcript IDs: ENSMUST00000021423.8, ENSMUST00000221768.2, ENSMUST00000222480.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGAAGCAATGGACTAGATTGTTTCTAAGAAACACCCAAGAATACTaGCATATAGAGGAGGATCTCCTATTTTATTCTTCACTCGGGTAT | + |
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Preference number: 1 (lower is better) Translates to: GKQWTRLFLRNTQEY*HIEEDLLFYSSLGY Trigger: ATACCCGAGTGAAGAATAAAATAGGAGATCCTCCTCTATATGTCAGTATTCTTGGGTGTTTCTTAGAAACAATCTAGTCCATTGCTTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222480.2 |
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| 3UTR TCA 72 bp | TGGACTAGATTGTTTCTAAGAAACACCCAAGAATACTaGCATATAGAGGAGGATCTCCTATTTTATTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: WTRLFLRNTQEY*HIEEDLLFYSS Trigger: TGAAGAATAAAATAGGAGATCCTCCTCTATATGTCAGTATTCTTGGGTGTTTCTTAGAAACAATCTAGTCCA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222480.2 |
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| CDS-3UTR TCA 90 bp | TTGACAAGGGCTTGGGGGAAGCAATGGACTAGATTGTTTCTAAGAAACACCCAAGGTGGCCACACCCAATaGTGCCCACGGTTAGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: LTRAWGKQWTRLFLRNTQGGHTQ*CPRLAV Trigger: AACTGCTAACCGTGGGCATCATTGGGTGTGGCCACC...TTGGGTGTTTCTTAGAAACAATCTAGTCCATTGCTTCCCCCAAGCCCTTGTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222480.2 |
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| CDS-3UTR CCA 90 bp | TTTGTGTTGACAAGGGCTTGGGGGAAGCAATGGACTAGATTGTTTCTAAGAAACAGCTGCTTTCCAAGGTaGCCACACCCAATGATGCCC | + |
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Preference number: 4 (lower is better) Translates to: FVLTRAWGKQWTRLFLRNSCFPR*PHPMMP Trigger: GGGCATCATTGGGTGTGGCCACCTTGGAAAGCAGCT...GTTTCTTAGAAACAATCTAGTCCATTGCTTCCCCCAAGCCCTTGTCAACACAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222480.2 |
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| CDS-3UTR TCA 90 bp | AGGATCTCCTATTTTATTCTTCACTCGGGTATCAAGCAGAACTCATGGCTCTCTCATGGGCACAGCCCTTaGTCATCAATCCCCGATAAC | + |
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Preference number: 4 (lower is better) Translates to: RISYFILHSGIKQNSWLSHGHSP*SSIPDN Trigger: GTTATCGGGGATTGATGATCAAGGGCTGTGCCCATG...AGAGAGCCATGAGTTCTGCTTGATACCCGAGTGAAGAATAAAATAGGAGATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222480.2 |
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| CDS-3UTR GCA 90 bp | GGAGGATCTCCTATTTTATTCTTCACTCGGGTATCAAGCAGAACTCATGGCTCTGGAGTGGCTGAGATGTaGTGGCTAAAAGGAGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: GGSPILFFTRVSSRTHGSGVAEM*WLKGVS Trigger: GGAAACTCCTTTTAGCCAGCACATCTCAGCCACTCC...AGAGCCATGAGTTCTGCTTGATACCCGAGTGAAGAATAAAATAGGAGATCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222480.2 |
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| CDS-3UTR TCA 90 bp | AGGATCTCCTATTTTATTCTTCACTCGGGTATCAAGCAGAACTCATGGCTCTCTAAGAGAAGGAGTGGCTaGGATGTGCTGGCTAAAAGG | + |
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Preference number: 4 (lower is better) Translates to: RISYFILHSGIKQNSWLSKRRSG*DVLAKR Trigger: CCTTTTAGCCAGCACATCTCAGCCACTCCTTCTCTT...AGAGAGCCATGAGTTCTGCTTGATACCCGAGTGAAGAATAAAATAGGAGATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222480.2 |
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| CDS-3UTR CCA 90 bp | AGGATCTCCTATTTTATTCTTCACTCGGGTATCAAGCAGAACTCATGGCTCTCTACCTGGGTAGCGGAATaGCGGATACAAAGCTGTACA | + |
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Preference number: 4 (lower is better) Translates to: RISYFILHSGIKQNSWLSTWVAE*RIQSCT Trigger: TGTACAGCTTTGTATCCGCCATTCCGCTACCCAGGT...AGAGAGCCATGAGTTCTGCTTGATACCCGAGTGAAGAATAAAATAGGAGATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222480.2 |
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| CDS-3UTR CCA 90 bp | TTGACAAGGGCTTGGGGGAAGCAATGGACTAGATTGTTTCTAAGAAACACCCAAATCTTGGAGAGCAATTaGGACCTCCTCATTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LTRAWGKQWTRLFLRNTQILESN*DLLILS Trigger: GGAGAGAATGAGGAGGTCCCAATTGCTCTCCAAGAT...TTGGGTGTTTCTTAGAAACAATCTAGTCCATTGCTTCCCCCAAGCCCTTGTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222480.2 |
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| CDS-3UTR CCA 90 bp | ACAAGGGCTTGGGGGAAGCAATGGACTAGATTGTTTCTAAGAAACACCCAAGAAGTGGCTGAGATGTGCTaGCTAAAAGGAGTTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: TRAWGKQWTRLFLRNTQEVAEMC*LKGVSL Trigger: CAAGGAAACTCCTTTTAGCCAGCACATCTCAGCCAC...TTCTTGGGTGTTTCTTAGAAACAATCTAGTCCATTGCTTCCCCCAAGCCCTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222480.2 |
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| CDS-3UTR GCA 90 bp | ATAGAGGAGGATCTCCTATTTTATTCTTCACTCGGGTATCAAGCAGAACTCATGTTTGCAGAAGAAGGCTaGATGGGCACAGCCCTTGAT | + |
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Preference number: 4 (lower is better) Translates to: IEEDLLFYSSLGYQAELMFAEEG*MGTALD Trigger: ATCAAGGGCTGTGCCCATGCAGCCTTCTTCTGCAAA...CATGAGTTCTGCTTGATACCCGAGTGAAGAATAAAATAGGAGATCCTCCTCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222480.2 |
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| CDS-3UTR GCA 90 bp | TTTGTGTTGACAAGGGCTTGGGGGAAGCAATGGACTAGATTGTTTCTAAGAAACGGAGTTTCCTTGAGTTaGACAGTAGTCAGATCAAAC | + |
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Preference number: 4 (lower is better) Translates to: FVLTRAWGKQWTRLFLRNGVSLS*TVVRSN Trigger: GTTTGATCTGACTACTGTGCAACTCAAGGAAACTCC...GTTTCTTAGAAACAATCTAGTCCATTGCTTCCCCCAAGCCCTTGTCAACACAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222480.2 |
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| CDS-3UTR CCA 90 bp | AGGATCTCCTATTTTATTCTTCACTCGGGTATCAAGCAGAACTCATGGCTCTCTGTAACGTTCTTCCTCTaGAATCCCAAACTCAAACCT | + |
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Preference number: 4 (lower is better) Translates to: RISYFILHSGIKQNSWLSVTFFL*NPKLKP Trigger: AGGTTTGAGTTTGGGATTCCAGAGGAAGAACGTTAC...AGAGAGCCATGAGTTCTGCTTGATACCCGAGTGAAGAATAAAATAGGAGATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222480.2 |
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| CDS-3UTR CCA 90 bp | ATAGAGGAGGATCTCCTATTTTATTCTTCACTCGGGTATCAAGCAGAACTCATGGGGGCCTCAGGATATTaGTGTGGTTCAGTAAACTTT | + |
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Preference number: 4 (lower is better) Translates to: IEEDLLFYSSLGYQAELMGASGY*CGSVNF Trigger: AAAGTTTACTGAACCACACCAATATCCTGAGGCCCC...CATGAGTTCTGCTTGATACCCGAGTGAAGAATAAAATAGGAGATCCTCCTCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222480.2 |
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| CDS-3UTR TCA 90 bp | GTTTCTAAGAAACACCCAAGAATACTGACATATAGAGGAGGATCTCCTATTTTAAGACTAATGTGGTCCTaGAGAGAAGGAGTGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: VSKKHPRILTYRGGSPILRLMWS*REGVAE Trigger: CTCAGCCACTCCTTCTCTTCAGGACCACATTAGTCT...TAAAATAGGAGATCCTCCTCTATATGTCAGTATTCTTGGGTGTTTCTTAGAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222480.2 |
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| CDS-3UTR GCA 90 bp | AGAATACTGACATATAGAGGAGGATCTCCTATTTTATTCTTCACTCGGGTATCATCCGGGGATGTATTGTaGGTGGCAGATTCTGCAATA | + |
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Preference number: 4 (lower is better) Translates to: RILTYRGGSPILFFTRVSSGDVL*VADSAI Trigger: TATTGCAGAATCTGCCACGCACAATACATCCCCGGA...TGATACCCGAGTGAAGAATAAAATAGGAGATCCTCCTCTATATGTCAGTATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222480.2 |
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| CDS-3UTR GCA 90 bp | GTTTCTAAGAAACACCCAAGAATACTGACATATAGAGGAGGATCTCCTATTTTAGTGCGTGGCAGATTCTaGAATAAGTTGCTCAAAGTA | + |
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Preference number: 4 (lower is better) Translates to: VSKKHPRILTYRGGSPILVRGRF*NKLLKV Trigger: TACTTTGAGCAACTTATTGCAGAATCTGCCACGCAC...TAAAATAGGAGATCCTCCTCTATATGTCAGTATTCTTGGGTGTTTCTTAGAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222480.2 |
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| CDS GCA 90 bp | TTCTCGGCAGGGATAGGGACGGTTTTCAGCAATACATTAGTCAGCTaGTTTCCAAGGTGGCCACACCCAATGATGCCCACGGTTAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: FSAGIGTVFSNTLVS*FPRWPHPMMPTVSS Trigger: ACTGCTAACCGTGGGCATCATTGGGTGTGGCCACCTTGGAAAGCAGCTGACTAATGTATTGCTGAAAACCGTCCCTATCCCTGCCGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021423.8 ENSMUST00000221768.2 ENSMUST00000222480.2 |
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| CDS GCA 90 bp | AGTTTCCGTAACTCACCCAGGGACTCTGGCCTCCTAGTGGAGATCTaGAGGTTCTCGGCAGGGATAGGGACGGTTTTCAGCAATACATTA | + |
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Preference number: 5 (lower is better) Translates to: SFRNSPRDSGLLVEI*RFSAGIGTVFSNTL Trigger: TAATGTATTGCTGAAAACCGTCCCTATCCCTGCCGAGAACCTGCAGATCTCCACTAGGAGGCCAGAGTCCCTGGGTGAGTTACGGAAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021423.8 ENSMUST00000221768.2 ENSMUST00000222480.2 |
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| CDS CCA 90 bp | ATAGGGACGGTTTTCAGCAATACATTAGTCAGCTGCTTTCCAAGGTaGCCACACCCAATGATGCCCACGGTTAGCAGTTCATCCTCAGTA | + |
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Preference number: 5 (lower is better) Translates to: IGTVFSNTLVSCFPR*PHPMMPTVSSSSSV Trigger: TACTGAGGATGAACTGCTAACCGTGGGCATCATTGGGTGTGGCCACCTTGGAAAGCAGCTGACTAATGTATTGCTGAAAACCGTCCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021423.8 ENSMUST00000221768.2 ENSMUST00000222480.2 |
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| CDS CCA 90 bp | TGTTGTCATAATCCTCAGCAAATTGGTACTGGGGCCTCAGGATATTaGTGTGGTTCAGTAAACTTTTCAACCTGGGTAGCGGAATGGCGG | + |
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Preference number: 5 (lower is better) Translates to: CCHNPQQIGTGASGY*CGSVNFSTWVAEWR Trigger: CCGCCATTCCGCTACCCAGGTTGAAAAGTTTACTGAACCACACCAATATCCTGAGGCCCCAGTACCAATTTGCTGAGGATTATGACAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021423.8 ENSMUST00000222480.2 |
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| CDS-3UTR CAA 90 bp | TTGACAAGGGCTTGGGGGAAGCAATGGACTAGATTGTTTCTAAGAAACACCCAATATCTTGGAGAGCAATaGGGACCTCCTCATTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: LTRAWGKQWTRLFLRNTQYLGEQ*GPPHSL Trigger: GAGAGAATGAGGAGGTCCCAATTGCTCTCCAAGATA...TTGGGTGTTTCTTAGAAACAATCTAGTCCATTGCTTCCCCCAAGCCCTTGTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222480.2 |
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| CDS TCA 90 bp | TTCACAGTACAAAAGACTAATGTGGTCCTGAAGAGAAGGAGTGGCTaGGATGTGCTGGCTAAAAGGAGTTTCCTTGAGTTGCACAGTAGT | + |
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Preference number: 5 (lower is better) Translates to: FTVQKTNVVLKRRSG*DVLAKRSFLELHSS Trigger: ACTACTGTGCAACTCAAGGAAACTCCTTTTAGCCAGCACATCTCAGCCACTCCTTCTCTTCAGGACCACATTAGTCTTTTGTACTGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021423.8 ENSMUST00000222480.2 |
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| CDS-3UTR CAA 90 bp | TTTGTGTTGACAAGGGCTTGGGGGAAGCAATGGACTAGATTGTTTCTAAGAAACATAATCCTCAGCAAATaGGTACTGGGGCCTCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: FVLTRAWGKQWTRLFLRNIILSK*VLGPQD Trigger: ATCCTGAGGCCCCAGTACCAATTTGCTGAGGATTAT...GTTTCTTAGAAACAATCTAGTCCATTGCTTCCCCCAAGCCCTTGTCAACACAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222480.2 |
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| CDS-3UTR CAA 90 bp | GGAGGATCTCCTATTTTATTCTTCACTCGGGTATCAAGCAGAACTCATGGCTCTATAGGGAGAAGCAGTTaGTTTAGAAGCTTCAGCACC | + |
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Preference number: 5 (lower is better) Translates to: GGSPILFFTRVSSRTHGSIGRSS*FRSFST Trigger: GGTGCTGAAGCTTCTAAACAAACTGCTTCTCCCTAT...AGAGCCATGAGTTCTGCTTGATACCCGAGTGAAGAATAAAATAGGAGATCCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222480.2 |
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| CDS-3UTR CAA 90 bp | ATAGAGGAGGATCTCCTATTTTATTCTTCACTCGGGTATCAAGCAGAACTCATGAAAGTAGAGAACATTTaGCAGAAGAAGGCTGCATGG | + |
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Preference number: 5 (lower is better) Translates to: IEEDLLFYSSLGYQAELMKVENI*QKKAAW Trigger: CCATGCAGCCTTCTTCTGCAAAATGTTCTCTACTTT...CATGAGTTCTGCTTGATACCCGAGTGAAGAATAAAATAGGAGATCCTCCTCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222480.2 |
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| CDS-3UTR CAA 90 bp | GTTTCTAAGAAACACCCAAGAATACTGACATATAGAGGAGGATCTCCTATTTTACTAAAAGGAGTTTCCTaGAGTTGCACAGTAGTCAGA | + |
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Preference number: 5 (lower is better) Translates to: VSKKHPRILTYRGGSPILLKGVS*SCTVVR Trigger: TCTGACTACTGTGCAACTCAAGGAAACTCCTTTTAG...TAAAATAGGAGATCCTCCTCTATATGTCAGTATTCTTGGGTGTTTCTTAGAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222480.2 |
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| CDS GCA 72 bp | AACTCACCCAGGGACTCTGGCCTCCTAGTGGAGATCTaGAGGTTCTCGGCAGGGATAGGGACGGTTTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: NSPRDSGLLVEI*RFSAGIGTVFS Trigger: GCTGAAAACCGTCCCTATCCCTGCCGAGAACCTGCAGATCTCCACTAGGAGGCCAGAGTCCCTGGGTGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021423.8 ENSMUST00000221768.2 ENSMUST00000222480.2 |
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| CDS GCA 72 bp | GGGATAGGGACGGTTTTCAGCAATACATTAGTCAGCTaGTTTCCAAGGTGGCCACACCCAATGATGCCCACG | + |
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Preference number: 6 (lower is better) Translates to: GIGTVFSNTLVS*FPRWPHPMMPT Trigger: CGTGGGCATCATTGGGTGTGGCCACCTTGGAAAGCAGCTGACTAATGTATTGCTGAAAACCGTCCCTATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021423.8 ENSMUST00000221768.2 ENSMUST00000222480.2 |
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| CDS GCA 72 bp | GGGCAGGATTCTGGGTCTGTCGTGCAGCTTTCTAAGTaGATAGGGAGAAGCAGTTTGTTTAGAAGCTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: GQDSGSVVQLSK*IGRSSLFRSFS Trigger: GCTGAAGCTTCTAAACAAACTGCTTCTCCCTATGCACTTAGAAAGCTGCACGACAGACCCAGAATCCTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021423.8 ENSMUST00000222480.2 |
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| CDS GCA 72 bp | GCTGAGATGTGCTGGCTAAAAGGAGTTTCCTTGAGTTaGACAGTAGTCAGATCAAACCAGGGGAAAGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: AEMCWLKGVSLS*TVVRSNQGKGL Trigger: AAGGCCTTTCCCCTGGTTTGATCTGACTACTGTGCAACTCAAGGAAACTCCTTTTAGCCAGCACATCTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021423.8 ENSMUST00000222480.2 |
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| CDS CCA 72 bp | GTTTTCAGCAATACATTAGTCAGCTGCTTTCCAAGGTaGCCACACCCAATGATGCCCACGGTTAGCAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: VFSNTLVSCFPR*PHPMMPTVSSS Trigger: TGAACTGCTAACCGTGGGCATCATTGGGTGTGGCCACCTTGGAAAGCAGCTGACTAATGTATTGCTGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021423.8 ENSMUST00000221768.2 ENSMUST00000222480.2 |
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| CDS CCA 72 bp | TGTGGTTCAGTAAACTTTTCAACCTGGGTAGCGGAATaGCGGATACAAAGCTGTACACGGTGCAGTGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: CGSVNFSTWVAE*RIQSCTRCSAC Trigger: ACAAGCACTGCACCGTGTACAGCTTTGTATCCGCCATTCCGCTACCCAGGTTGAAAAGTTTACTGAACCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021423.8 ENSMUST00000222480.2 |
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| CDS CCA 72 bp | GGTACCCCGGATAATCGTTGTATCTTGGAGAGCAATTaGGACCTCCTCATTCTCTCCCCAGATGTTGTCATA | + |
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Preference number: 6 (lower is better) Translates to: GTPDNRCILESN*DLLILSPDVVI Trigger: TATGACAACATCTGGGGAGAGAATGAGGAGGTCCCAATTGCTCTCCAAGATACAACGATTATCCGGGGTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021423.8 ENSMUST00000222480.2 |
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| CDS CAA 72 bp | GGAGTGGCTGAGATGTGCTGGCTAAAAGGAGTTTCCTaGAGTTGCACAGTAGTCAGATCAAACCAGGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: GVAEMCWLKGVS*SCTVVRSNQGK Trigger: TTTCCCCTGGTTTGATCTGACTACTGTGCAACTCAAGGAAACTCCTTTTAGCCAGCACATCTCAGCCACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021423.8 ENSMUST00000222480.2 |
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| CDS CAA 90 bp | GTGCGTGGCAGATTCTGCAATAAGTTGCTCAAAGTAGAGAACATTTaGCAGAAGAAGGCTGCATGGGCACAGCCCTTGATCATCAATCCC | + |
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Preference number: 6 (lower is better) Translates to: VRGRFCNKLLKVENI*QKKAAWAQPLIINP Trigger: GGGATTGATGATCAAGGGCTGTGCCCATGCAGCCTTCTTCTGCAAAATGTTCTCTACTTTGAGCAACTTATTGCAGAATCTGCCACGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021423.8 ENSMUST00000221768.2 ENSMUST00000222480.2 |
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| CDS CAA 90 bp | GACACAGTCCGGGGATGTATTGTGCGTGGCAGATTCTGCAATAAGTaGCTCAAAGTAGAGAACATTTTGCAGAAGAAGGCTGCATGGGCA | + |
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Preference number: 6 (lower is better) Translates to: DTVRGCIVRGRFCNK*LKVENILQKKAAWA Trigger: TGCCCATGCAGCCTTCTTCTGCAAAATGTTCTCTACTTTGAGCAACTTATTGCAGAATCTGCCACGCACAATACATCCCCGGACTGTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021423.8 ENSMUST00000221768.2 ENSMUST00000222480.2 |
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| CDS TCA 72 bp | AGAAGCAGTTTGTTTAGAAGCTTCAGCACCTGTGAGTaGAACACGCTCCTTGACGTACAGGCATTGATGAGG | + |
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Preference number: 6 (lower is better) Translates to: RSSLFRSFSTCE*NTLLDVQALMR Trigger: CCTCATCAATGCCTGTACGTCAAGGAGCGTGTTTCACTCACAGGTGCTGAAGCTTCTAAACAAACTGCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021423.8 ENSMUST00000222480.2 |
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| CDS GCA 72 bp | GTTGCTCAAAGTAGAGAACATTTTGCAGAAGAAGGCTaGATGGGCACAGCCCTTGATCATCAATCCCCGATA | + |
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Preference number: 6 (lower is better) Translates to: VAQSREHFAEEG*MGTALDHQSPI Trigger: TATCGGGGATTGATGATCAAGGGCTGTGCCCATGCAGCCTTCTTCTGCAAAATGTTCTCTACTTTGAGCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021423.8 ENSMUST00000221768.2 ENSMUST00000222480.2 |
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| CDS CCA 72 bp | TCAGGATATTGGTGTGGTTCAGTAAACTTTTCAACCTaGGTAGCGGAATGGCGGATACAAAGCTGTACACGG | + |
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Preference number: 6 (lower is better) Translates to: SGYWCGSVNFST*VAEWRIQSCTR Trigger: CCGTGTACAGCTTTGTATCCGCCATTCCGCTACCCAGGTTGAAAAGTTTACTGAACCACACCAATATCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021423.8 ENSMUST00000222480.2 |
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| CDS CCA 72 bp | TCAGCAAATTGGTACTGGGGCCTCAGGATATTGGTGTaGTTCAGTAAACTTTTCAACCTGGGTAGCGGAATG | + |
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Preference number: 6 (lower is better) Translates to: SANWYWGLRILV*FSKLFNLGSGM Trigger: CATTCCGCTACCCAGGTTGAAAAGTTTACTGAACCACACCAATATCCTGAGGCCCCAGTACCAATTTGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021423.8 ENSMUST00000222480.2 |
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| CDS CCA 72 bp | AATCCTCAGCAAATTGGTACTGGGGCCTCAGGATATTaGTGTGGTTCAGTAAACTTTTCAACCTGGGTAGCG | + |
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Preference number: 6 (lower is better) Translates to: NPQQIGTGASGY*CGSVNFSTWVA Trigger: CGCTACCCAGGTTGAAAAGTTTACTGAACCACACCAATATCCTGAGGCCCCAGTACCAATTTGCTGAGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021423.8 ENSMUST00000222480.2 |
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| CDS CAA 72 bp | ATTCTCTCCCCAGATGTTGTCATAATCCTCAGCAAATaGGTACTGGGGCCTCAGGATATTGGTGTGGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: ILSPDVVIILSK*VLGPQDIGVVQ Trigger: CTGAACCACACCAATATCCTGAGGCCCCAGTACCAATTTGCTGAGGATTATGACAACATCTGGGGAGAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021423.8 ENSMUST00000222480.2 |
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| CDS CAA 72 bp | CGGGGATGTATTGTGCGTGGCAGATTCTGCAATAAGTaGCTCAAAGTAGAGAACATTTTGCAGAAGAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: RGCIVRGRFCNK*LKVENILQKKA Trigger: AGCCTTCTTCTGCAAAATGTTCTCTACTTTGAGCAACTTATTGCAGAATCTGCCACGCACAATACATCCCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021423.8 ENSMUST00000221768.2 ENSMUST00000222480.2 |
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