Pregenerated sensors for NOXO1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019320Ensembl transcript IDs: ENSMUST00000019464.8
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CAA 90 bp | AATCCTGCTTTCTTGGTGAGGTCTAGATCCCTGCTTTGCCTGAGGTaGGCTTTGACAGTACAACCTCTCTGCAGAGCAGCAATACAATCC | + |
Preference number: 2 (lower is better) Translates to: NPAFLVRSRSLLCLR*ALTVQPLCRAAIQS Trigger: GGATTGTATTGCTGCTCTGCAGAGAGGTTGTACTGTCAAAGCCAACCTCAGGCAAAGCAGGGATCTAGACCTCACCAAGAAAGCAGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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3UTR GCA 72 bp | AATCCTGCTTTCTTGGTGAGGTCTAGATCCCTGCTTTaGCTGAGGTTGGCTTTGACAGTACAACCTCTCTGC | + |
Preference number: 3 (lower is better) Translates to: NPAFLVRSRSLL*LRLALTVQPLC Trigger: GCAGAGAGGTTGTACTGTCAAAGCCAACCTCAGGCAAAGCAGGGATCTAGACCTCACCAAGAAAGCAGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS-3UTR GCA 90 bp | CCAGTTTTATTTAGAGGAAATAGAAAGTTAGCTGGCCCGTGGCCCTGCCAGCCACTGGGAACCCTGGCCTaGCCAGGAGCGAGCCCAGCC | + |
Preference number: 4 (lower is better) Translates to: PVLFRGNRKLAGPWPCQPLGTLA*PGASPA Trigger: GGCTGGGCTCGCTCCTGGGCAGGCCAGGGTTCCCAG...TGGCTGGCAGGGCCACGGGCCAGCTAACTTTCTATTTCCTCTAAATAAAACTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS-3UTR CCA 90 bp | AGCCCCACTCTTAATCCTGCTTTCTTGGTGAGGTCTAGATCCCTGCTTTGCCTGACTGTCTGGGAACCCTaGCCTGCCCAGGAGCGAGCC | + |
Preference number: 4 (lower is better) Translates to: SPTLNPAFLVRSRSLLCLTVWEP*PAQERA Trigger: GGCTCGCTCCTGGGCAGGCCAGGGTTCCCAGACAGT...CAGGCAAAGCAGGGATCTAGACCTCACCAAGAAAGCAGGATTAAGAGTGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS-3UTR CCA 90 bp | CCAGTTTTATTTAGAGGAAATAGAAAGTTAGCTGGCCCGTGGCCCTGCCAGCCATGCCCCAGCACTGTCTaGGAACCCTGGCCTGCCCAG | + |
Preference number: 4 (lower is better) Translates to: PVLFRGNRKLAGPWPCQPCPSTV*EPWPAQ Trigger: CTGGGCAGGCCAGGGTTCCCAGACAGTGCTGGGGCA...TGGCTGGCAGGGCCACGGGCCAGCTAACTTTCTATTTCCTCTAAATAAAACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS-3UTR TCA 90 bp | CCTGCTTTGCCTGAGGTTGGCTTTGACAGTACAACCTCTCTGCAGAGCAGCAATTTGCAAAGCCAGGCCTaGCTCCTGGCCTTGGCACGT | + |
Preference number: 4 (lower is better) Translates to: PALPEVGFDSTTSLQSSNLQSQA*LLALAR Trigger: ACGTGCCAAGGCCAGGAGTCAGGCCTGGCTTTGCAA...ATTGCTGCTCTGCAGAGAGGTTGTACTGTCAAAGCCAACCTCAGGCAAAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS-3UTR TCA 90 bp | CTTAATCCTGCTTTCTTGGTGAGGTCTAGATCCCTGCTTTGCCTGAGGTTGGCTCCACCAGCCTCGGTCTaGGGTCTCCAGCACATGGAC | + |
Preference number: 4 (lower is better) Translates to: LNPAFLVRSRSLLCLRLAPPASV*GLQHMD Trigger: GTCCATGTGCTGGAGACCTCAGACCGAGGCTGGTGG...AGCCAACCTCAGGCAAAGCAGGGATCTAGACCTCACCAAGAAAGCAGGATTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS-3UTR GCA 90 bp | CTTTGCCTGAGGTTGGCTTTGACAGTACAACCTCTCTGCAGAGCAGCAATACAAGCAGGATCACCAGGCTaGCAGGAGGCAGCATGGGCT | + |
Preference number: 4 (lower is better) Translates to: LCLRLALTVQPLCRAAIQAGSPG*QEAAWA Trigger: AGCCCATGCTGCCTCCTGGCAGCCTGGTGATCCTGC...TTGTATTGCTGCTCTGCAGAGAGGTTGTACTGTCAAAGCCAACCTCAGGCAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS-3UTR GCA 90 bp | GTGAGGTCTAGATCCCTGCTTTGCCTGAGGTTGGCTTTGACAGTACAACCTCTCTCCGGCCATTATACCTaGACAGCCACCAGCCTCGGT | + |
Preference number: 4 (lower is better) Translates to: VRSRSLLCLRLALTVQPLSGHYT*TATSLG Trigger: ACCGAGGCTGGTGGCTGTGCAGGTATAATGGCCGGA...GAGAGGTTGTACTGTCAAAGCCAACCTCAGGCAAAGCAGGGATCTAGACCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS-3UTR CCA 90 bp | CTTTGCCTGAGGTTGGCTTTGACAGTACAACCTCTCTGCAGAGCAGCAATACAAGCCAGGCCTGACTCCTaGCCTTGGCACGTTGCTACC | + |
Preference number: 4 (lower is better) Translates to: LCLRLALTVQPLCRAAIQARPDS*PWHVAT Trigger: GGTAGCAACGTGCCAAGGCCAGGAGTCAGGCCTGGC...TTGTATTGCTGCTCTGCAGAGAGGTTGTACTGTCAAAGCCAACCTCAGGCAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS-3UTR CCA 90 bp | CTTAATCCTGCTTTCTTGGTGAGGTCTAGATCCCTGCTTTGCCTGAGGTTGGCTTGCCAGGAGGCAGCATaGGCTCCAGATCCAGAGGTT | + |
Preference number: 4 (lower is better) Translates to: LNPAFLVRSRSLLCLRLACQEAA*APDPEV Trigger: AACCTCTGGATCTGGAGCCCATGCTGCCTCCTGGCA...AGCCAACCTCAGGCAAAGCAGGGATCTAGACCTCACCAAGAAAGCAGGATTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS-3UTR CCA 90 bp | CTTAATCCTGCTTTCTTGGTGAGGTCTAGATCCCTGCTTTGCCTGAGGTTGGCTAGGCTGCCTCTGGGTTaGGATAAGGGCTCCTCTGGT | + |
Preference number: 4 (lower is better) Translates to: LNPAFLVRSRSLLCLRLARLPLG*DKGSSG Trigger: ACCAGAGGAGCCCTTATCCCAACCCAGAGGCAGCCT...AGCCAACCTCAGGCAAAGCAGGGATCTAGACCTCACCAAGAAAGCAGGATTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS-3UTR TCA 90 bp | CTTAATCCTGCTTTCTTGGTGAGGTCTAGATCCCTGCTTTGCCTGAGGTTGGCTAACCAGGCTACCTGCTaGTCCTTGTTCTCCACCAGC | + |
Preference number: 4 (lower is better) Translates to: LNPAFLVRSRSLLCLRLANQATC*SLFSTS Trigger: GCTGGTGGAGAACAAGGATCAGCAGGTAGCCTGGTT...AGCCAACCTCAGGCAAAGCAGGGATCTAGACCTCACCAAGAAAGCAGGATTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS-3UTR GCA 90 bp | TTGCCTGAGGTTGGCTTTGACAGTACAACCTCTCTGCAGAGCAGCAATACAATCCTCAGCCACCTTGTCTaGCCCAGCACTGTCTGGGAA | + |
Preference number: 4 (lower is better) Translates to: LPEVGFDSTTSLQSSNTILSHLV*PSTVWE Trigger: TTCCCAGACAGTGCTGGGGCAGACAAGGTGGCTGAG...GATTGTATTGCTGCTCTGCAGAGAGGTTGTACTGTCAAAGCCAACCTCAGGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS-3UTR CCA 90 bp | CTTAATCCTGCTTTCTTGGTGAGGTCTAGATCCCTGCTTTGCCTGAGGTTGGCTTGTCAAGGCTGCCTCTaGGTTGGGATAAGGGCTCCT | + |
Preference number: 4 (lower is better) Translates to: LNPAFLVRSRSLLCLRLACQGCL*VGIRAP Trigger: AGGAGCCCTTATCCCAACCCAGAGGCAGCCTTGACA...AGCCAACCTCAGGCAAAGCAGGGATCTAGACCTCACCAAGAAAGCAGGATTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS-3UTR CCA 90 bp | CTTTGCCTGAGGTTGGCTTTGACAGTACAACCTCTCTGCAGAGCAGCAATACAACTCCAGGTAGGGAGCTaGAAACCAGGCTACCTGCTG | + |
Preference number: 4 (lower is better) Translates to: LCLRLALTVQPLCRAAIQLQVGS*KPGYLL Trigger: CAGCAGGTAGCCTGGTTTCCAGCTCCCTACCTGGAG...TTGTATTGCTGCTCTGCAGAGAGGTTGTACTGTCAAAGCCAACCTCAGGCAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS-3UTR TCA 90 bp | TTGCCTGAGGTTGGCTTTGACAGTACAACCTCTCTGCAGAGCAGCAATACAATCTGTGTCACTGTTGTCTaGCCAGCACACGGAGAAGGC | + |
Preference number: 4 (lower is better) Translates to: LPEVGFDSTTSLQSSNTICVTVV*PAHGEG Trigger: GCCTTCTCCGTGTGCTGGTCAGACAACAGTGACACA...GATTGTATTGCTGCTCTGCAGAGAGGTTGTACTGTCAAAGCCAACCTCAGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS-3UTR GCA 90 bp | TTGCCTGAGGTTGGCTTTGACAGTACAACCTCTCTGCAGAGCAGCAATACAATCAGGGTCTTCTGGAGCTaGCTGAACTCATCCCAGCTC | + |
Preference number: 4 (lower is better) Translates to: LPEVGFDSTTSLQSSNTIRVFWS*LNSSQL Trigger: GAGCTGGGATGAGTTCAGGCAGCTCCAGAAGACCCT...GATTGTATTGCTGCTCTGCAGAGAGGTTGTACTGTCAAAGCCAACCTCAGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS-3UTR CCA 90 bp | CTTAATCCTGCTTTCTTGGTGAGGTCTAGATCCCTGCTTTGCCTGAGGTTGGCTCAGGCCTGCCTCCACTaGGAAGGTTTTCTTAAGGGT | + |
Preference number: 4 (lower is better) Translates to: LNPAFLVRSRSLLCLRLAQACLH*EGFLKG Trigger: ACCCTTAAGAAAACCTTCCCAGTGGAGGCAGGCCTG...AGCCAACCTCAGGCAAAGCAGGGATCTAGACCTCACCAAGAAAGCAGGATTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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3UTR CAA 72 bp | TTCTTGGTGAGGTCTAGATCCCTGCTTTGCCTGAGGTaGGCTTTGACAGTACAACCTCTCTGCAGAGCAGCA | + |
Preference number: 4 (lower is better) Translates to: FLVRSRSLLCLR*ALTVQPLCRAA Trigger: TGCTGCTCTGCAGAGAGGTTGTACTGTCAAAGCCAACCTCAGGCAAAGCAGGGATCTAGACCTCACCAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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3UTR CAA 72 bp | GTGAGGTCTAGATCCCTGCTTTGCCTGAGGTTGGCTTaGACAGTACAACCTCTCTGCAGAGCAGCAATACAA | + |
Preference number: 4 (lower is better) Translates to: VRSRSLLCLRLA*TVQPLCRAAIQ Trigger: TTGTATTGCTGCTCTGCAGAGAGGTTGTACTGTCAAAGCCAACCTCAGGCAAAGCAGGGATCTAGACCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS-3UTR TCA 90 bp | CCTGCTTTGCCTGAGGTTGGCTTTGACAGTACAACCTCTCTGCAGAGCAGCAATATGTCCAGAATTTCTTaGGCCTTGGTGTGGAAAGGT | + |
Preference number: 4 (lower is better) Translates to: PALPEVGFDSTTSLQSSNMSRIS*ALVWKG Trigger: ACCTTTCCACACCAAGGCTCAAGAAATTCTGGACAT...ATTGCTGCTCTGCAGAGAGGTTGTACTGTCAAAGCCAACCTCAGGCAAAGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS-3UTR GCA 90 bp | CTTTGCCTGAGGTTGGCTTTGACAGTACAACCTCTCTGCAGAGCAGCAATACAATATGAATGTCAAGGCTaGCTCTGGGTTGGGATAAGG | + |
Preference number: 4 (lower is better) Translates to: LCLRLALTVQPLCRAAIQYECQG*LWVGIR Trigger: CCTTATCCCAACCCAGAGGCAGCCTTGACATTCATA...TTGTATTGCTGCTCTGCAGAGAGGTTGTACTGTCAAAGCCAACCTCAGGCAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS-3UTR CCA 90 bp | TTGCCTGAGGTTGGCTTTGACAGTACAACCTCTCTGCAGAGCAGCAATACAATCGAGCATCAGGAAGCTTaGGAAGAACTTGTTCAGATC | + |
Preference number: 4 (lower is better) Translates to: LPEVGFDSTTSLQSSNTIEHQEA*EELVQI Trigger: GATCTGAACAAGTTCTTCCCAAGCTTCCTGATGCTC...GATTGTATTGCTGCTCTGCAGAGAGGTTGTACTGTCAAAGCCAACCTCAGGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS GCA 90 bp | CCTCAGCCACCTTGTCTGCCCCAGCACTGTCTGGGAACCCTGGCCTaGCCAGGAGCGAGCCCAGCCCTTCAGGTTGCAGCGACATTGCAG | + |
Preference number: 5 (lower is better) Translates to: PQPPCLPQHCLGTLA*PGASPALQVAATLQ Trigger: CTGCAATGTCGCTGCAACCTGAAGGGCTGGGCTCGCTCCTGGGCAGGCCAGGGTTCCCAGACAGTGCTGGGGCAGACAAGGTGGCTGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS GCA 90 bp | AGTTGGTACTACAGGGGGAATGGTCCTGTCCTCAGCCACCTTGTCTaGCCCAGCACTGTCTGGGAACCCTGGCCTGCCCAGGAGCGAGCC | + |
Preference number: 5 (lower is better) Translates to: SWYYRGNGPVLSHLV*PSTVWEPWPAQERA Trigger: GGCTCGCTCCTGGGCAGGCCAGGGTTCCCAGACAGTGCTGGGGCAGACAAGGTGGCTGAGGACAGGACCATTCCCCCTGTAGTACCAACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS GCA 90 bp | GTTGCAGCGACATTGCAGGGAGTAGGCCTGTCCGGCCATTATACCTaGACAGCCACCAGCCTCGGTCTGAGGTCTCCAGCACATGGACAC | + |
Preference number: 5 (lower is better) Translates to: VAATLQGVGLSGHYT*TATSLGLRSPAHGH Trigger: GTGTCCATGTGCTGGAGACCTCAGACCGAGGCTGGTGGCTGTGCAGGTATAATGGCCGGACAGGCCTACTCCCTGCAATGTCGCTGCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS CCA 90 bp | TTATACCTGCACAGCCACCAGCCTCGGTCTGAGGTCTCCAGCACATaGACACGTGCCCCTGAGGGCACGGATAGCTCATCAGAGCGACTG | + |
Preference number: 5 (lower is better) Translates to: LYLHSHQPRSEVSST*TRAPEGTDSSSERL Trigger: CAGTCGCTCTGATGAGCTATCCGTGCCCTCAGGGGCACGTGTCCATGTGCTGGAGACCTCAGACCGAGGCTGGTGGCTGTGCAGGTATAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS CCA 90 bp | TCTGGATGGCACTCATACAGGGACGAGTTGGTACTACAGGGGGAATaGTCCTGTCCTCAGCCACCTTGTCTGCCCCAGCACTGTCTGGGA | + |
Preference number: 5 (lower is better) Translates to: SGWHSYRDELVLQGE*SCPQPPCLPQHCLG Trigger: TCCCAGACAGTGCTGGGGCAGACAAGGTGGCTGAGGACAGGACCATTCCCCCTGTAGTACCAACTCGTCCCTGTATGAGTGCCATCCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS CCA 90 bp | GACCAGTATGCCCCCGACGTGTCAGCAATGGAGCATCAGGAAGCTTaGGAAGAACTTGTTCAGATCTCCGTAGCAGGCCTGCCTCCACTG | + |
Preference number: 5 (lower is better) Translates to: DQYAPDVSAMEHQEA*EELVQISVAGLPPL Trigger: CAGTGGAGGCAGGCCTGCTACGGAGATCTGAACAAGTTCTTCCCAAGCTTCCTGATGCTCCATTGCTGACACGTCGGGGGCATACTGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS-3UTR CAA 90 bp | CCTGCTTTGCCTGAGGTTGGCTTTGACAGTACAACCTCTCTGCAGAGCAGCAATCCTGGCCTTGGCACGTaGCTACCTCCTCCAGGTAGG | + |
Preference number: 5 (lower is better) Translates to: PALPEVGFDSTTSLQSSNPGLGT*LPPPGR Trigger: CCTACCTGGAGGAGGTAGCAACGTGCCAAGGCCAGG...ATTGCTGCTCTGCAGAGAGGTTGTACTGTCAAAGCCAACCTCAGGCAAAGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS CCA 90 bp | CGTAGCAGGCCTGCCTCCACTGGGAAGGTTTTCTTAAGGGTCTTCTaGAGCTGCCTGAACTCATCCCAGCTCCTCCGCACAAATGTGTCA | + |
Preference number: 5 (lower is better) Translates to: RSRPASTGKVFLRVF*SCLNSSQLLRTNVS Trigger: TGACACATTTGTGCGGAGGAGCTGGGATGAGTTCAGGCAGCTCCAGAAGACCCTTAAGAAAACCTTCCCAGTGGAGGCAGGCCTGCTACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS GCA 90 bp | TCTGACCAGCACACGGAGAAGGCAAATGTCTGGAGTCGGTCCATTTaGACCAAGGCTACAGCATGGGCTGATACTGGGTGTCTTGGGCTT | + |
Preference number: 5 (lower is better) Translates to: SDQHTEKANVWSRSI*TKATAWADTGCLGL Trigger: AAGCCCAAGACACCCAGTATCAGCCCATGCTGTAGCCTTGGTGCAAATGGACCGACTCCAGACATTTGCCTTCTCCGTGTGCTGGTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS GCA 90 bp | AGGCCTGCCTCCACTGGGAAGGTTTTCTTAAGGGTCTTCTGGAGCTaGCTGAACTCATCCCAGCTCCTCCGCACAAATGTGTCACTGTTG | + |
Preference number: 5 (lower is better) Translates to: RPASTGKVFLRVFWS*LNSSQLLRTNVSLL Trigger: CAACAGTGACACATTTGTGCGGAGGAGCTGGGATGAGTTCAGGCAGCTCCAGAAGACCCTTAAGAAAACCTTCCCAGTGGAGGCAGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS-3UTR CAA 90 bp | CCAGTTTTATTTAGAGGAAATAGAAAGTTAGCTGGCCCGTGGCCCTGCCAGCCACTGTCCTCAGCCACCTaGTCTGCCCCAGCACTGTCT | + |
Preference number: 5 (lower is better) Translates to: PVLFRGNRKLAGPWPCQPLSSAT*SAPALS Trigger: AGACAGTGCTGGGGCAGACAAGGTGGCTGAGGACAG...TGGCTGGCAGGGCCACGGGCCAGCTAACTTTCTATTTCCTCTAAATAAAACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS TCA 90 bp | CCTGAACTCATCCCAGCTCCTCCGCACAAATGTGTCACTGTTGTCTaGCCAGCACACGGAGAAGGCAAATGTCTGGAGTCGGTCCATTTG | + |
Preference number: 5 (lower is better) Translates to: PELIPAPPHKCVTVV*PAHGEGKCLESVHL Trigger: CAAATGGACCGACTCCAGACATTTGCCTTCTCCGTGTGCTGGTCAGACAACAGTGACACATTTGTGCGGAGGAGCTGGGATGAGTTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS CCA 90 bp | TCACCAGGCTGCCAGGAGGCAGCATGGGCTCCAGATCCAGAGGTTTaGGTACAAAGAAGCCGTGAAGTGCTGAACTCCTCAATATGTGTT | + |
Preference number: 5 (lower is better) Translates to: SPGCQEAAWAPDPEV*VQRSREVLNSSICV Trigger: AACACATATTGAGGAGTTCAGCACTTCACGGCTTCTTTGTACCCAAACCTCTGGATCTGGAGCCCATGCTGCCTCCTGGCAGCCTGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS CCA 90 bp | AATGTGTCACTGTTGTCTGACCAGCACACGGAGAAGGCAAATGTCTaGAGTCGGTCCATTTGCACCAAGGCTACAGCATGGGCTGATACT | + |
Preference number: 5 (lower is better) Translates to: NVSLLSDQHTEKANV*SRSICTKATAWADT Trigger: AGTATCAGCCCATGCTGTAGCCTTGGTGCAAATGGACCGACTCCAGACATTTGCCTTCTCCGTGTGCTGGTCAGACAACAGTGACACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS-3UTR CAA 90 bp | AGCCCCACTCTTAATCCTGCTTTCTTGGTGAGGTCTAGATCCCTGCTTTGCCTGTATGTCCAGAATTTCTaGAGCCTTGGTGTGGAAAGG | + |
Preference number: 5 (lower is better) Translates to: SPTLNPAFLVRSRSLLCLYVQNF*SLGVER Trigger: CCTTTCCACACCAAGGCTCAAGAAATTCTGGACATA...CAGGCAAAGCAGGGATCTAGACCTCACCAAGAAAGCAGGATTAAGAGTGGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS-3UTR CAA 90 bp | CTTTGCCTGAGGTTGGCTTTGACAGTACAACCTCTCTGCAGAGCAGCAATACAAGGAGCATCAGGAAGCTaGGGAAGAACTTGTTCAGAT | + |
Preference number: 5 (lower is better) Translates to: LCLRLALTVQPLCRAAIQGASGS*GRTCSD Trigger: ATCTGAACAAGTTCTTCCCAAGCTTCCTGATGCTCC...TTGTATTGCTGCTCTGCAGAGAGGTTGTACTGTCAAAGCCAACCTCAGGCAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS GCA 72 bp | CCTGGCCTGCCCAGGAGCGAGCCCAGCCCTTCAGGTTaGAGCGACATTGCAGGGAGTAGGCCTGTCCGGCCA | + |
Preference number: 6 (lower is better) Translates to: PGLPRSEPSPSG*SDIAGSRPVRP Trigger: TGGCCGGACAGGCCTACTCCCTGCAATGTCGCTGCAACCTGAAGGGCTGGGCTCGCTCCTGGGCAGGCCAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS GCA 72 bp | CCTTGTCTGCCCCAGCACTGTCTGGGAACCCTGGCCTaGCCAGGAGCGAGCCCAGCCCTTCAGGTTGCAGCG | + |
Preference number: 6 (lower is better) Translates to: PCLPQHCLGTLA*PGASPALQVAA Trigger: CGCTGCAACCTGAAGGGCTGGGCTCGCTCCTGGGCAGGCCAGGGTTCCCAGACAGTGCTGGGGCAGACAAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS CAA 90 bp | CTGGCCTGCCCAGGAGCGAGCCCAGCCCTTCAGGTTGCAGCGACATaGCAGGGAGTAGGCCTGTCCGGCCATTATACCTGCACAGCCACC | + |
Preference number: 6 (lower is better) Translates to: LACPGASPALQVAAT*QGVGLSGHYTCTAT Trigger: GGTGGCTGTGCAGGTATAATGGCCGGACAGGCCTACTCCCTGCAATGTCGCTGCAACCTGAAGGGCTGGGCTCGCTCCTGGGCAGGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS CAA 90 bp | GGACGAGTTGGTACTACAGGGGGAATGGTCCTGTCCTCAGCCACCTaGTCTGCCCCAGCACTGTCTGGGAACCCTGGCCTGCCCAGGAGC | + |
Preference number: 6 (lower is better) Translates to: GRVGTTGGMVLSSAT*SAPALSGNPGLPRS Trigger: GCTCCTGGGCAGGCCAGGGTTCCCAGACAGTGCTGGGGCAGACAAGGTGGCTGAGGACAGGACCATTCCCCCTGTAGTACCAACTCGTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS CCA 72 bp | CACAGCCACCAGCCTCGGTCTGAGGTCTCCAGCACATaGACACGTGCCCCTGAGGGCACGGATAGCTCATCA | + |
Preference number: 6 (lower is better) Translates to: HSHQPRSEVSST*TRAPEGTDSSS Trigger: TGATGAGCTATCCGTGCCCTCAGGGGCACGTGTCCATGTGCTGGAGACCTCAGACCGAGGCTGGTGGCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS CAA 72 bp | CCAGGAGCGAGCCCAGCCCTTCAGGTTGCAGCGACATaGCAGGGAGTAGGCCTGTCCGGCCATTATACCTGC | + |
Preference number: 6 (lower is better) Translates to: PGASPALQVAAT*QGVGLSGHYTC Trigger: GCAGGTATAATGGCCGGACAGGCCTACTCCCTGCAATGTCGCTGCAACCTGAAGGGCTGGGCTCGCTCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS TCA 72 bp | GCAGAACTGCCTCCCACTTCCTTGCAAAGCCAGGCCTaGCTCCTGGCCTTGGCACGTTGCTACCTCCTCCAG | + |
Preference number: 6 (lower is better) Translates to: AELPPTSLQSQA*LLALARCYLLQ Trigger: CTGGAGGAGGTAGCAACGTGCCAAGGCCAGGAGTCAGGCCTGGCTTTGCAAGGAAGTGGGAGGCAGTTCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS CAA 90 bp | TCCCACTTCCTTGCAAAGCCAGGCCTGACTCCTGGCCTTGGCACGTaGCTACCTCCTCCAGGTAGGGAGCTGGAAACCAGGCTACCTGCT | + |
Preference number: 6 (lower is better) Translates to: SHFLAKPGLTPGLGT*LPPPGRELETRLPA Trigger: AGCAGGTAGCCTGGTTTCCAGCTCCCTACCTGGAGGAGGTAGCAACGTGCCAAGGCCAGGAGTCAGGCCTGGCTTTGCAAGGAAGTGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS GCA 72 bp | ACATTGCAGGGAGTAGGCCTGTCCGGCCATTATACCTaGACAGCCACCAGCCTCGGTCTGAGGTCTCCAGCA | + |
Preference number: 6 (lower is better) Translates to: TLQGVGLSGHYT*TATSLGLRSPA Trigger: TGCTGGAGACCTCAGACCGAGGCTGGTGGCTGTGCAGGTATAATGGCCGGACAGGCCTACTCCCTGCAATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS CCA 72 bp | GCCTTGGCACGTTGCTACCTCCTCCAGGTAGGGAGCTaGAAACCAGGCTACCTGCTGATCCTTGTTCTCCAC | + |
Preference number: 6 (lower is better) Translates to: ALARCYLLQVGS*KPGYLLILVLH Trigger: GTGGAGAACAAGGATCAGCAGGTAGCCTGGTTTCCAGCTCCCTACCTGGAGGAGGTAGCAACGTGCCAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS CCA 72 bp | CACTCATACAGGGACGAGTTGGTACTACAGGGGGAATaGTCCTGTCCTCAGCCACCTTGTCTGCCCCAGCAC | + |
Preference number: 6 (lower is better) Translates to: HSYRDELVLQGE*SCPQPPCLPQH Trigger: GTGCTGGGGCAGACAAGGTGGCTGAGGACAGGACCATTCCCCCTGTAGTACCAACTCGTCCCTGTATGAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS CAA 90 bp | CGACCAGTATGCCCCCGACGTGTCAGCAATGGAGCATCAGGAAGCTaGGGAAGAACTTGTTCAGATCTCCGTAGCAGGCCTGCCTCCACT | + |
Preference number: 6 (lower is better) Translates to: RPVCPRRVSNGASGS*GRTCSDLRSRPAST Trigger: AGTGGAGGCAGGCCTGCTACGGAGATCTGAACAAGTTCTTCCCAAGCTTCCTGATGCTCCATTGCTGACACGTCGGGGGCATACTGGTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS CCA 72 bp | CCTGCCTCCACTGGGAAGGTTTTCTTAAGGGTCTTCTaGAGCTGCCTGAACTCATCCCAGCTCCTCCGCACA | + |
Preference number: 6 (lower is better) Translates to: PASTGKVFLRVF*SCLNSSQLLRT Trigger: TGTGCGGAGGAGCTGGGATGAGTTCAGGCAGCTCCAGAAGACCCTTAAGAAAACCTTCCCAGTGGAGGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS CAA 90 bp | AGCTGCCTGAACTCATCCCAGCTCCTCCGCACAAATGTGTCACTGTaGTCTGACCAGCACACGGAGAAGGCAAATGTCTGGAGTCGGTCC | + |
Preference number: 6 (lower is better) Translates to: SCLNSSQLLRTNVSL*SDQHTEKANVWSRS Trigger: GGACCGACTCCAGACATTTGCCTTCTCCGTGTGCTGGTCAGACAACAGTGACACATTTGTGCGGAGGAGCTGGGATGAGTTCAGGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS CAA 72 bp | TGCCCCCGACGTGTCAGCAATGGAGCATCAGGAAGCTaGGGAAGAACTTGTTCAGATCTCCGTAGCAGGCCT | + |
Preference number: 6 (lower is better) Translates to: CPRRVSNGASGS*GRTCSDLRSRP Trigger: AGGCCTGCTACGGAGATCTGAACAAGTTCTTCCCAAGCTTCCTGATGCTCCATTGCTGACACGTCGGGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS TCA 72 bp | ATCCCAGCTCCTCCGCACAAATGTGTCACTGTTGTCTaGCCAGCACACGGAGAAGGCAAATGTCTGGAGTCG | + |
Preference number: 6 (lower is better) Translates to: IPAPPHKCVTVV*PAHGEGKCLES Trigger: CGACTCCAGACATTTGCCTTCTCCGTGTGCTGGTCAGACAACAGTGACACATTTGTGCGGAGGAGCTGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS CCA 72 bp | CTGTTGTCTGACCAGCACACGGAGAAGGCAAATGTCTaGAGTCGGTCCATTTGCACCAAGGCTACAGCATGG | + |
Preference number: 6 (lower is better) Translates to: LLSDQHTEKANV*SRSICTKATAW Trigger: CCATGCTGTAGCCTTGGTGCAAATGGACCGACTCCAGACATTTGCCTTCTCCGTGTGCTGGTCAGACAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS CCA 72 bp | CAGTCCTCGACCAGTATGCCCCCGACGTGTCAGCAATaGAGCATCAGGAAGCTTGGGAAGAACTTGTTCAGA | + |
Preference number: 6 (lower is better) Translates to: QSSTSMPPTCQQ*SIRKLGKNLFR Trigger: TCTGAACAAGTTCTTCCCAAGCTTCCTGATGCTCCATTGCTGACACGTCGGGGGCATACTGGTCGAGGACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS GCA 72 bp | TCCACTGGGAAGGTTTTCTTAAGGGTCTTCTGGAGCTaGCTGAACTCATCCCAGCTCCTCCGCACAAATGTG | + |
Preference number: 6 (lower is better) Translates to: STGKVFLRVFWS*LNSSQLLRTNV Trigger: CACATTTGTGCGGAGGAGCTGGGATGAGTTCAGGCAGCTCCAGAAGACCCTTAAGAAAACCTTCCCAGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS CAA 72 bp | AACTCATCCCAGCTCCTCCGCACAAATGTGTCACTGTaGTCTGACCAGCACACGGAGAAGGCAAATGTCTGG | + |
Preference number: 6 (lower is better) Translates to: NSSQLLRTNVSL*SDQHTEKANVW Trigger: CCAGACATTTGCCTTCTCCGTGTGCTGGTCAGACAACAGTGACACATTTGTGCGGAGGAGCTGGGATGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS CAA 72 bp | CGTGAAGTGCTGAACTCCTCAATATGTGTTCTGAGGTaGCCAGCAATGCCTGTACATAGGTGTCCAGCAGCC | + |
Preference number: 6 (lower is better) Translates to: REVLNSSICVLR*PAMPVHRCPAA Trigger: GGCTGCTGGACACCTATGTACAGGCATTGCTGGCAACCTCAGAACACATATTGAGGAGTTCAGCACTTCACG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS CAA 90 bp | CAAAGAAGCCGTGAAGTGCTGAACTCCTCAATATGTGTTCTGAGGTaGCCAGCAATGCCTGTACATAGGTGTCCAGCAGCCGCAAACGTA | + |
Preference number: 6 (lower is better) Translates to: QRSREVLNSSICVLR*PAMPVHRCPAAANV Trigger: TACGTTTGCGGCTGCTGGACACCTATGTACAGGCATTGCTGGCAACCTCAGAACACATATTGAGGAGTTCAGCACTTCACGGCTTCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |
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CDS CCA 72 bp | GATGTCGTAGTAATATGTCCAGAATTTCTTGAGCCTTaGTGTGGAAAGGTCTGTCTCTTATGTCAAGAGTGT | + |
Preference number: 6 (lower is better) Translates to: DVVVICPEFLEP*CGKVCLLCQEC Trigger: ACACTCTTGACATAAGAGACAGACCTTTCCACACCAAGGCTCAAGAAATTCTGGACATATTACTACGACATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019464.8 |