Pregenerated sensors for NOXA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036805Ensembl transcript IDs: ENSMUST00000044018.8, ENSMUST00000114373.8
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GACTGGCCGGCCCCAGACCCCCTGGCACTGGAGCTGCAACCCTCCTaGGCCCACGGGCACATTCCTCCATATACTCTGCAGGGACTCCTC | + |
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Preference number: 5 (lower is better) Translates to: DWPAPDPLALELQPS*AHGHIPPYTLQGLL Trigger: GAGGAGTCCCTGCAGAGTATATGGAGGAATGTGCCCGTGGGCCCAGGAGGGTTGCAGCTCCAGTGCCAGGGGGTCTGGGGCCGGCCAGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS GCA 90 bp | TCCCCGCTGGAGGAAGCCAACAGCCATGCAGGTGTCCTTAGTCACTaGTTGGTCAAATGCCCGCAGCGCAGCCTCGGGATCCCCTGCCAT | + |
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Preference number: 5 (lower is better) Translates to: SPLEEANSHAGVLSH*LVKCPQRSLGIPCH Trigger: ATGGCAGGGGATCCCGAGGCTGCGCTGCGGGCATTTGACCAAGCAGTGACTAAGGACACCTGCATGGCTGTTGGCTTCCTCCAGCGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CCA 90 bp | CGCTGGAGGAAGCCAACAGCCATGCAGGTGTCCTTAGTCACTGCTTaGTCAAATGCCCGCAGCGCAGCCTCGGGATCCCCTGCCATCAGA | + |
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Preference number: 5 (lower is better) Translates to: RWRKPTAMQVSLVTA*SNARSAASGSPAIR Trigger: TCTGATGGCAGGGGATCCCGAGGCTGCGCTGCGGGCATTTGACCAAGCAGTGACTAAGGACACCTGCATGGCTGTTGGCTTCCTCCAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS GCA 90 bp | GAAGCCAACAGCCATGCAGGTGTCCTTAGTCACTGCTTGGTCAAATaGCCGCAGCGCAGCCTCGGGATCCCCTGCCATCAGATGCACACA | + |
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Preference number: 5 (lower is better) Translates to: EANSHAGVLSHCLVK*PQRSLGIPCHQMHT Trigger: TGTGTGCATCTGATGGCAGGGGATCCCGAGGCTGCGCTGCGGGCATTTGACCAAGCAGTGACTAAGGACACCTGCATGGCTGTTGGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CCA 90 bp | ACAGCCTCCTGGAACCTCTGCAGCTGGAAATTGGCCACTCCCCGCTaGAGGAAGCCAACAGCCATGCAGGTGTCCTTAGTCACTGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: TASWNLCSWKLATPR*RKPTAMQVSLVTAW Trigger: CCAAGCAGTGACTAAGGACACCTGCATGGCTGTTGGCTTCCTCCAGCGGGGAGTGGCCAATTTCCAGCTGCAGAGGTTCCAGGAGGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CCA 90 bp | CTTGAGCCCCCTCTGGCCATTTGGAGATTGCCTCCACTAGAGTATTaGCAGCCTTGGTCCAGAGCCCTGCCTGGCACTGTGCTGATGCCA | + |
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Preference number: 5 (lower is better) Translates to: LEPPLAIWRLPPLEY*QPWSRALPGTVLMP Trigger: TGGCATCAGCACAGTGCCAGGCAGGGCTCTGGACCAAGGCTGCCAATACTCTAGTGGAGGCAATCTCCAAATGGCCAGAGGGGGCTCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS TCA 90 bp | AGTCACCAAGGATTCAGGGTCCTTTGTAGCTGCTCCCTCAGATCCTaGGGAAACTTCAGAGGGGCCTGGACCAGGCCTTCTGGATGCCAG | + |
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Preference number: 5 (lower is better) Translates to: SHQGFRVLCSCSLRS*GNFRGAWTRPSGCQ Trigger: CTGGCATCCAGAAGGCCTGGTCCAGGCCCCTCTGAAGTTTCCTCAGGATCTGAGGGAGCAGCTACAAAGGACCCTGAATCCTTGGTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CCA 90 bp | CCTCAGATCCTGAGGAAACTTCAGAGGGGCCTGGACCAGGCCTTCTaGATGCCAGCAAACTATCATATAGGCCAGGGCTCGTGTGACCAC | + |
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Preference number: 5 (lower is better) Translates to: PQILRKLQRGLDQAF*MPANYHIGQGSCDH Trigger: GTGGTCACACGAGCCCTGGCCTATATGATAGTTTGCTGGCATCCAGAAGGCCTGGTCCAGGCCCCTCTGAAGTTTCCTCAGGATCTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CCA 90 bp | TGTCCATGGCAATGTCCAGGATGTCTTGAGCCCCCTCTGGCCATTTaGAGATTGCCTCCACTAGAGTATTGGCAGCCTTGGTCCAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: CPWQCPGCLEPPLAI*RLPPLEYWQPWSRA Trigger: GGCTCTGGACCAAGGCTGCCAATACTCTAGTGGAGGCAATCTCCAAATGGCCAGAGGGGGCTCAAGACATCCTGGACATTGCCATGGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CCA 90 bp | AGGAAATCCATGGGCTCCAGATGTTTTAGGTATCGCCTGGGAGGCTaGAAGACCTCACCCTTGGGCACTTGCTGTAGCTGTAGGGGTACC | + |
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Preference number: 5 (lower is better) Translates to: RKSMGSRCFRYRLGG*KTSPLGTCCSCRGT Trigger: GGTACCCCTACAGCTACAGCAAGTGCCCAAGGGTGAGGTCTTCCAGCCTCCCAGGCGATACCTAAAACATCTGGAGCCCATGGATTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS GCA 90 bp | AGGCCAGTTCCTCTTGGGACCTTCAGGGGCACAGTAAAGTGGCACTaGACAGTGACAGTCACCAAGGATTCAGGGTCCTTTGTAGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: RPVPLGTFRGTVKWH*TVTVTKDSGSFVAA Trigger: AGCAGCTACAAAGGACCCTGAATCCTTGGTGACTGTCACTGTGCAGTGCCACTTTACTGTGCCCCTGAAGGTCCCAAGAGGAACTGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CCA 90 bp | CCTCTGGCCATTTGGAGATTGCCTCCACTAGAGTATTGGCAGCCTTaGTCCAGAGCCCTGCCTGGCACTGTGCTGATGCCATGTTGTATA | + |
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Preference number: 5 (lower is better) Translates to: PLAIWRLPPLEYWQP*SRALPGTVLMPCCI Trigger: TATACAACATGGCATCAGCACAGTGCCAGGCAGGGCTCTGGACCAAGGCTGCCAATACTCTAGTGGAGGCAATCTCCAAATGGCCAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CCA 90 bp | CCTTGCCAAGGAAATCCATGGGCTCCAGATGTTTTAGGTATCGCCTaGGAGGCTGGAAGACCTCACCCTTGGGCACTTGCTGTAGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: PCQGNPWAPDVLGIA*EAGRPHPWALAVAV Trigger: TACAGCTACAGCAAGTGCCCAAGGGTGAGGTCTTCCAGCCTCCCAGGCGATACCTAAAACATCTGGAGCCCATGGATTTCCTTGGCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CCA 90 bp | CTGGACAGGCCAGTTCCTCTTGGGACCTTCAGGGGCACAGTAAAGTaGCACTGCACAGTGACAGTCACCAAGGATTCAGGGTCCTTTGTA | + |
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Preference number: 5 (lower is better) Translates to: LDRPVPLGTFRGTVK*HCTVTVTKDSGSFV Trigger: TACAAAGGACCCTGAATCCTTGGTGACTGTCACTGTGCAGTGCCACTTTACTGTGCCCCTGAAGGTCCCAAGAGGAACTGGCCTGTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS TCA 90 bp | GGTACCTGTTTCTGCACTTTGTCCATGGCAATGTCCAGGATGTCTTaGGCCCCCTCTGGCCATTTGGAGATTGCCTCCACTAGAGTATTG | + |
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Preference number: 5 (lower is better) Translates to: GTCFCTLSMAMSRMS*APSGHLEIASTRVL Trigger: CAATACTCTAGTGGAGGCAATCTCCAAATGGCCAGAGGGGGCTCAAGACATCCTGGACATTGCCATGGACAAAGTGCAGAAACAGGTACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS GCA 72 bp | AGGACTGGCCGGCCCCAGACCCCCTGGCACTGGAGCTaGAACCCTCCTGGGCCCACGGGCACATTCCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: RTGRPQTPWHWS*NPPGPTGTFLH Trigger: ATGGAGGAATGTGCCCGTGGGCCCAGGAGGGTTGCAGCTCCAGTGCCAGGGGGTCTGGGGCCGGCCAGTCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CCA 72 bp | GCCCCAGACCCCCTGGCACTGGAGCTGCAACCCTCCTaGGCCCACGGGCACATTCCTCCATATACTCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: APDPLALELQPS*AHGHIPPYTLQ Trigger: CTGCAGAGTATATGGAGGAATGTGCCCGTGGGCCCAGGAGGGTTGCAGCTCCAGTGCCAGGGGGTCTGGGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CAA 90 bp | CCGCTGGAGGAAGCCAACAGCCATGCAGGTGTCCTTAGTCACTGCTaGGTCAAATGCCCGCAGCGCAGCCTCGGGATCCCCTGCCATCAG | + |
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Preference number: 6 (lower is better) Translates to: PLEEANSHAGVLSHC*VKCPQRSLGIPCHQ Trigger: CTGATGGCAGGGGATCCCGAGGCTGCGCTGCGGGCATTTGACCAAGCAGTGACTAAGGACACCTGCATGGCTGTTGGCTTCCTCCAGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS GCA 72 bp | AGCCATGCAGGTGTCCTTAGTCACTGCTTGGTCAAATaGCCGCAGCGCAGCCTCGGGATCCCCTGCCATCAG | + |
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Preference number: 6 (lower is better) Translates to: SHAGVLSHCLVK*PQRSLGIPCHQ Trigger: CTGATGGCAGGGGATCCCGAGGCTGCGCTGCGGGCATTTGACCAAGCAGTGACTAAGGACACCTGCATGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CAA 72 bp | GAAGCCAACAGCCATGCAGGTGTCCTTAGTCACTGCTaGGTCAAATGCCCGCAGCGCAGCCTCGGGATCCCC | + |
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Preference number: 6 (lower is better) Translates to: EANSHAGVLSHC*VKCPQRSLGIP Trigger: GGGGATCCCGAGGCTGCGCTGCGGGCATTTGACCAAGCAGTGACTAAGGACACCTGCATGGCTGTTGGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS TCA 72 bp | ACCACCCGTAGTGCTCAGGACCCTCTTACACATAGATaGGGATGGCTGGTGGCCAGCATGCTCCGCCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: TTRSAQDPLTHR*GWLVASMLRLG Trigger: TCCCAGGCGGAGCATGCTGGCCACCAGCCATCCTCATCTATGTGTAAGAGGGTCCTGAGCACTACGGGTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044018.8 |
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| CDS GCA 72 bp | GAGGAAGCCAACAGCCATGCAGGTGTCCTTAGTCACTaGTTGGTCAAATGCCCGCAGCGCAGCCTCGGGATC | + |
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Preference number: 6 (lower is better) Translates to: EEANSHAGVLSH*LVKCPQRSLGI Trigger: GATCCCGAGGCTGCGCTGCGGGCATTTGACCAAGCAGTGACTAAGGACACCTGCATGGCTGTTGGCTTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CCA 72 bp | AAGCCAACAGCCATGCAGGTGTCCTTAGTCACTGCTTaGTCAAATGCCCGCAGCGCAGCCTCGGGATCCCCT | + |
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Preference number: 6 (lower is better) Translates to: KPTAMQVSLVTA*SNARSAASGSP Trigger: AGGGGATCCCGAGGCTGCGCTGCGGGCATTTGACCAAGCAGTGACTAAGGACACCTGCATGGCTGTTGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CCA 72 bp | AGTTCTGGTCTCCTGGCTGGGGTCCCAGTACAAGCATaGCTTCCACATAGGCGCCAGCTGGGACCACAAAGC | + |
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Preference number: 6 (lower is better) Translates to: SSGLLAGVPVQA*LPHRRQLGPQS Trigger: GCTTTGTGGTCCCAGCTGGCGCCTATGTGGAAGCCATGCTTGTACTGGGACCCCAGCCAGGAGACCAGAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CAA 90 bp | CAAATCCTCCGGTCTTTGGGCACGATAGTTGTACTGAGCTACTACTaGGTAGAGGACTGGCCGGCCCCAGACCCCCTGGCACTGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: QILRSLGTIVVLSYY*VEDWPAPDPLALEL Trigger: CAGCTCCAGTGCCAGGGGGTCTGGGGCCGGCCAGTCCTCTACCAAGTAGTAGCTCAGTACAACTATCGTGCCCAAAGACCGGAGGATTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS GCA 72 bp | CGCCTGGGAGGCTGGAAGACCTCACCCTTGGGCACTTaGTGTAGCTGTAGGGGTACCTGTTTCTGCACTTTG | + |
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Preference number: 6 (lower is better) Translates to: RLGGWKTSPLGT*CSCRGTCFCTL Trigger: CAAAGTGCAGAAACAGGTACCCCTACAGCTACAGCAAGTGCCCAAGGGTGAGGTCTTCCAGCCTCCCAGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS GCA 72 bp | AATGCCAACGCAGCCATCTCGGTGTCCCTCCAGCCATaGTTCGTCCACTTCACACAGGACATCCACCGTGTC | + |
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Preference number: 6 (lower is better) Translates to: NANAAISVSLQP*FVHFTQDIHRV Trigger: GACACGGTGGATGTCCTGTGTGAAGTGGACGAAGCATGGCTGGAGGGACACCGAGATGGCTGCGTTGGCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CCA 72 bp | TGGAACCTCTGCAGCTGGAAATTGGCCACTCCCCGCTaGAGGAAGCCAACAGCCATGCAGGTGTCCTTAGTC | + |
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Preference number: 6 (lower is better) Translates to: WNLCSWKLATPR*RKPTAMQVSLV Trigger: GACTAAGGACACCTGCATGGCTGTTGGCTTCCTCCAGCGGGGAGTGGCCAATTTCCAGCTGCAGAGGTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CCA 72 bp | CCTCTGGCCATTTGGAGATTGCCTCCACTAGAGTATTaGCAGCCTTGGTCCAGAGCCCTGCCTGGCACTGTG | + |
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Preference number: 6 (lower is better) Translates to: PLAIWRLPPLEY*QPWSRALPGTV Trigger: CACAGTGCCAGGCAGGGCTCTGGACCAAGGCTGCCAATACTCTAGTGGAGGCAATCTCCAAATGGCCAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CAA 90 bp | TGGCAATGTCCAGGATGTCTTGAGCCCCCTCTGGCCATTTGGAGATaGCCTCCACTAGAGTATTGGCAGCCTTGGTCCAGAGCCCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: WQCPGCLEPPLAIWR*PPLEYWQPWSRALP Trigger: AGGCAGGGCTCTGGACCAAGGCTGCCAATACTCTAGTGGAGGCAATCTCCAAATGGCCAGAGGGGGCTCAAGACATCCTGGACATTGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS TCA 72 bp | GGATTCAGGGTCCTTTGTAGCTGCTCCCTCAGATCCTaGGGAAACTTCAGAGGGGCCTGGACCAGGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: GFRVLCSCSLRS*GNFRGAWTRPS Trigger: AGAAGGCCTGGTCCAGGCCCCTCTGAAGTTTCCTCAGGATCTGAGGGAGCAGCTACAAAGGACCCTGAATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CCA 72 bp | CTGAGGAAACTTCAGAGGGGCCTGGACCAGGCCTTCTaGATGCCAGCAAACTATCATATAGGCCAGGGCTCG | + |
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Preference number: 6 (lower is better) Translates to: LRKLQRGLDQAF*MPANYHIGQGS Trigger: CGAGCCCTGGCCTATATGATAGTTTGCTGGCATCCAGAAGGCCTGGTCCAGGCCCCTCTGAAGTTTCCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CCA 72 bp | TCGTCCACTTCACACAGGACATCCACCGTGTCCCCTTaGTGGAAGTCCAAATCCTCCGGTCTTTGGGCACGA | + |
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Preference number: 6 (lower is better) Translates to: SSTSHRTSTVSP*WKSKSSGLWAR Trigger: TCGTGCCCAAAGACCGGAGGATTTGGACTTCCACCAAGGGGACACGGTGGATGTCCTGTGTGAAGTGGACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CAA 72 bp | CATTTGGAGATTGCCTCCACTAGAGTATTGGCAGCCTaGGTCCAGAGCCCTGCCTGGCACTGTGCTGATGCC | + |
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Preference number: 6 (lower is better) Translates to: HLEIASTRVLAA*VQSPAWHCADA Trigger: GGCATCAGCACAGTGCCAGGCAGGGCTCTGGACCAAGGCTGCCAATACTCTAGTGGAGGCAATCTCCAAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CAA 72 bp | TTCGTCCACTTCACACAGGACATCCACCGTGTCCCCTaGGTGGAAGTCCAAATCCTCCGGTCTTTGGGCACG | + |
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Preference number: 6 (lower is better) Translates to: FVHFTQDIHRVP*VEVQILRSLGT Trigger: CGTGCCCAAAGACCGGAGGATTTGGACTTCCACCAAGGGGACACGGTGGATGTCCTGTGTGAAGTGGACGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CAA 90 bp | GCAGCCTTGGTCCAGAGCCCTGCCTGGCACTGTGCTGATGCCATGTaGTATAGGACCTCCCAGGCTTGCAATTTGAAGTTCAGACCCAGT | + |
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Preference number: 6 (lower is better) Translates to: AALVQSPAWHCADAM*YRTSQACNLKFRPS Trigger: ACTGGGTCTGAACTTCAAATTGCAAGCCTGGGAGGTCCTATACAACATGGCATCAGCACAGTGCCAGGCAGGGCTCTGGACCAAGGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CAA 90 bp | CCCTCTGGCCATTTGGAGATTGCCTCCACTAGAGTATTGGCAGCCTaGGTCCAGAGCCCTGCCTGGCACTGTGCTGATGCCATGTTGTAT | + |
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Preference number: 6 (lower is better) Translates to: PSGHLEIASTRVLAA*VQSPAWHCADAMLY Trigger: ATACAACATGGCATCAGCACAGTGCCAGGCAGGGCTCTGGACCAAGGCTGCCAATACTCTAGTGGAGGCAATCTCCAAATGGCCAGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CCA 72 bp | ACTAGAGTATTGGCAGCCTTGGTCCAGAGCCCTGCCTaGCACTGTGCTGATGCCATGTTGTATAGGACCTCC | + |
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Preference number: 6 (lower is better) Translates to: TRVLAALVQSPA*HCADAMLYRTS Trigger: GGAGGTCCTATACAACATGGCATCAGCACAGTGCCAGGCAGGGCTCTGGACCAAGGCTGCCAATACTCTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CCA 72 bp | ATGGGCTCCAGATGTTTTAGGTATCGCCTGGGAGGCTaGAAGACCTCACCCTTGGGCACTTGCTGTAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: MGSRCFRYRLGG*KTSPLGTCCSC Trigger: ACAGCTACAGCAAGTGCCCAAGGGTGAGGTCTTCCAGCCTCCCAGGCGATACCTAAAACATCTGGAGCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CCA 72 bp | GGAAATCCATGGGCTCCAGATGTTTTAGGTATCGCCTaGGAGGCTGGAAGACCTCACCCTTGGGCACTTGCT | + |
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Preference number: 6 (lower is better) Translates to: GNPWAPDVLGIA*EAGRPHPWALA Trigger: AGCAAGTGCCCAAGGGTGAGGTCTTCCAGCCTCCCAGGCGATACCTAAAACATCTGGAGCCCATGGATTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CCA 72 bp | GGTGAAGGAGGGCTTGAGCTAGTAGTGTCTGAAAACTaGACAGGCCAGTTCCTCTTGGGACCTTCAGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: GEGGLELVVSEN*TGQFLLGPSGA Trigger: TGCCCCTGAAGGTCCCAAGAGGAACTGGCCTGTCCAGTTTTCAGACACTACTAGCTCAAGCCCTCCTTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CCA 72 bp | TCCTCCATATACTCTGCAGGGACTCCTCCGTGGAGATaGGAATCCAGGATCTCTCCTCTCCTGGGGCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: SSIYSAGTPPWR*ESRISPLLGLC Trigger: ACAAAGCCCCAGGAGAGGAGAGATCCTGGATTCCCATCTCCACGGAGGAGTCCCTGCAGAGTATATGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CAA 72 bp | TTTAGGTATCGCCTGGGAGGCTGGAAGACCTCACCCTaGGGCACTTGCTGTAGCTGTAGGGGTACCTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: FRYRLGGWKTSP*GTCCSCRGTCF Trigger: GAAACAGGTACCCCTACAGCTACAGCAAGTGCCCAAGGGTGAGGTCTTCCAGCCTCCCAGGCGATACCTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CAA 90 bp | CAGCCATGCTTCGTCCACTTCACACAGGACATCCACCGTGTCCCCTaGGTGGAAGTCCAAATCCTCCGGTCTTTGGGCACGATAGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: QPCFVHFTQDIHRVP*VEVQILRSLGTIVV Trigger: TACAACTATCGTGCCCAAAGACCGGAGGATTTGGACTTCCACCAAGGGGACACGGTGGATGTCCTGTGTGAAGTGGACGAAGCATGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CCA 72 bp | CAATGTCCAGGATGTCTTGAGCCCCCTCTGGCCATTTaGAGATTGCCTCCACTAGAGTATTGGCAGCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: QCPGCLEPPLAI*RLPPLEYWQPW Trigger: CCAAGGCTGCCAATACTCTAGTGGAGGCAATCTCCAAATGGCCAGAGGGGGCTCAAGACATCCTGGACATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CAA 72 bp | GTCCAGAGCCCTGCCTGGCACTGTGCTGATGCCATGTaGTATAGGACCTCCCAGGCTTGCAATTTGAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: VQSPAWHCADAM*YRTSQACNLKF Trigger: GAACTTCAAATTGCAAGCCTGGGAGGTCCTATACAACATGGCATCAGCACAGTGCCAGGCAGGGCTCTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CAA 90 bp | GACATCCACCGTGTCCCCTTGGTGGAAGTCCAAATCCTCCGGTCTTaGGGCACGATAGTTGTACTGAGCTACTACTTGGTAGAGGACTGG | + |
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Preference number: 6 (lower is better) Translates to: DIHRVPLVEVQILRS*GTIVVLSYYLVEDW Trigger: CCAGTCCTCTACCAAGTAGTAGCTCAGTACAACTATCGTGCCCAAAGACCGGAGGATTTGGACTTCCACCAAGGGGACACGGTGGATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS TCA 72 bp | TTCTGCACTTTGTCCATGGCAATGTCCAGGATGTCTTaGGCCCCCTCTGGCCATTTGGAGATTGCCTCCACT | + |
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Preference number: 6 (lower is better) Translates to: FCTLSMAMSRMS*APSGHLEIAST Trigger: AGTGGAGGCAATCTCCAAATGGCCAGAGGGGGCTCAAGACATCCTGGACATTGCCATGGACAAAGTGCAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CAA 72 bp | TTTCTGCACTTTGTCCATGGCAATGTCCAGGATGTCTaGAGCCCCCTCTGGCCATTTGGAGATTGCCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: FLHFVHGNVQDV*SPLWPFGDCLH Trigger: GTGGAGGCAATCTCCAAATGGCCAGAGGGGGCTCAAGACATCCTGGACATTGCCATGGACAAAGTGCAGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CAA 90 bp | TGGGCGTTGTGGTCATCAGGAATGACAGAAGCCACCACCTTAGCCTaGCCAAGGAAATCCATGGGCTCCAGATGTTTTAGGTATCGCCTG | + |
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Preference number: 6 (lower is better) Translates to: WALWSSGMTEATTLA*PRKSMGSRCFRYRL Trigger: CAGGCGATACCTAAAACATCTGGAGCCCATGGATTTCCTTGGCAAGGCTAAGGTGGTGGCTTCTGTCATTCCTGATGACCACAACGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CAA 72 bp | GACCTCCCAGGCTTGCAATTTGAAGTTCAGACCCAGTaGTGTGTAGTCAATGACAGCATTGTCCCTCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: DLPGLQFEVQTQ*CVVNDSIVPQL Trigger: CAGCTGAGGGACAATGCTGTCATTGACTACACACAACTGGGTCTGAACTTCAAATTGCAAGCCTGGGAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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| CDS CAA 72 bp | TGGTCATCAGGAATGACAGAAGCCACCACCTTAGCCTaGCCAAGGAAATCCATGGGCTCCAGATGTTTTAGG | + |
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Preference number: 6 (lower is better) Translates to: WSSGMTEATTLA*PRKSMGSRCFR Trigger: CCTAAAACATCTGGAGCCCATGGATTTCCTTGGCAAGGCTAAGGTGGTGGCTTCTGTCATTCCTGATGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044018.8 ENSMUST00000114373.8 |
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