Pregenerated sensors for NOX4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030562Ensembl transcript IDs: ENSMUST00000032781.14, ENSMUST00000124057.8, ENSMUST00000126887.8, ENSMUST00000136577.9, ENSMUST00000144267.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTAGGACACAGTAAGAAGGCATGGTTCATCTTGGAAGTATCTTCATaGCATGCAGCATCACTACAGACAAAGAAACTGTATATCCATACT | + |
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Preference number: 1 (lower is better) Translates to: VGHSKKAWFILEVSS*HAASLQTKKLYIHT Trigger: AGTATGGATATACAGTTTCTTTGTCTGTAGTGATGCTGCATGCCATGAAGATACTTCCAAGATGAACCATGCCTTCTTACTGTGTCCTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144267.2 |
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| 3UTR CCA 90 bp | GAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTaGTTTTTAAGGATAAGCTTAAAGCACATTTTCATTACTAAGCCA | + |
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Preference number: 1 (lower is better) Translates to: ERSCASVFGARYKAL*FLRISLKHIFITKP Trigger: TGGCTTAGTAATGAAAATGTGCTTTAAGCTTATCCTTAAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR CCA 90 bp | GAAATCAAAGTGAGTCAAAGGAGAGAGGTCTTGTGCTTCTGTGTTTaGTGCAAGATACAAAGCTCTTTGGTTTTTAAGGATAAGCTTAAA | + |
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Preference number: 1 (lower is better) Translates to: EIKVSQRREVLCFCV*CKIQSSLVFKDKLK Trigger: TTTAAGCTTATCCTTAAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGACTCACTTTGATTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR-3UTR TCA 90 bp | GTGACCTTAGCCAACGTGCCCAACAGTGAGCAGGAGATGGGAACCCTCTGTTACGCTAGGGACCTTCTGTaGTCCTCGAAGATAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: VTLANVPNSEQEMGTLCYARDLL*SSKISQ Trigger: CTGGCTTATCTTCGAGGATCACAGAAGGTCCCTAGC...GTAACAGAGGGTTCCCATCTCCTGCTCACTGTTGGGCACGTTGGCTAAGGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136577.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGCGAGGCAGGAGAGTCAGTAGTGAAGCAGCAGATATGAAGTACCCGTATATCCATACTCTGCTGTaGCAGGGCTGCCATCGTTTC | + |
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Preference number: 2 (lower is better) Translates to: LQRGRRVSSEAADMKYPYIHTLL*QGCHRF Trigger: GAAACGATGGCAGCCCTGGCACAGCAGAGTATGGAT...ATACGGGTACTTCATATCTGCTGCTTCACTACTGACTCTCCTGCCTCGCTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144267.2 |
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| 3UTR-3UTR GCA 90 bp | GTGACCTTAGCCAACGTGCCCAACAGTGAGCAGGAGATGGGAACCCTCTGTTACCTCATTCTGGTATCTTaGTGCATTCAGTTCAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: VTLANVPNSEQEMGTLCYLILVS*CIQFKE Trigger: TTCCTTGAACTGAATGCAGCAAGATACCAGAATGAG...GTAACAGAGGGTTCCCATCTCCTGCTCACTGTTGGGCACGTTGGCTAAGGTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136577.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGCGAGGCAGGAGAGTCAGTAGTGAAGCAGCAGATATGAAGTACCCGTATCCAAATCCAGGTCTGTaGGAAATGAGCTTGGAACTT | + |
|
Preference number: 2 (lower is better) Translates to: LQRGRRVSSEAADMKYPYPNPGL*EMSLEL Trigger: AAGTTCCAAGCTCATTTCCCACAGACCTGGATTTGG...ATACGGGTACTTCATATCTGCTGCTTCACTACTGACTCTCCTGCCTCGCTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCAGCGAGGCAGGAGAGTCAGTAGTGAAGCAGCAGATATGAAGTACCCGTATCAGGGTATCACTCCATaGATTCAGCATCTCTTATCT | + |
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Preference number: 2 (lower is better) Translates to: LQRGRRVSSEAADMKYPYQGITP*IQHLLS Trigger: AGATAAGAGATGCTGAATTCATGGAGTGATACCCTG...ATACGGGTACTTCATATCTGCTGCTTCACTACTGACTCTCCTGCCTCGCTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCAGCGAGGCAGGAGAGTCAGTAGTGAAGCAGCAGATATGAAGTACCCGTATGGCTACATGCACACCTaGGAAAATACAGATAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: LQRGRRVSSEAADMKYPYGYMHT*ENTDSY Trigger: GTAACTATCTGTATTTTCTCAGGTGTGCATGTAGCC...ATACGGGTACTTCATATCTGCTGCTTCACTACTGACTCTCCTGCCTCGCTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR-3UTR CCA 90 bp | AATCAAAGTGAGTCAAAGGAGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATAGGGCATTCACCAAGTaGGCGGCTACATGCACACCT | + |
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Preference number: 2 (lower is better) Translates to: NQSESKERGLVLLCLVQDRAFTK*AATCTP Trigger: AGGTGTGCATGTAGCCGCCCACTTGGTGAATGCCCT...ATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGACTCACTTTGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR-3UTR CCA 90 bp | GTGACCTTAGCCAACGTGCCCAACAGTGAGCAGGAGATGGGAACCCTCTGTTACTGGAGAATAATATACTaGCCAGGTCTTGCTTTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: VTLANVPNSEQEMGTLCYWRIIY*PGLALK Trigger: CTTTAAAGCAAGACCTGGCCAGTATATTATTCTCCA...GTAACAGAGGGTTCCCATCTCCTGCTCACTGTTGGGCACGTTGGCTAAGGTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136577.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGCGAGGCAGGAGAGTCAGTAGTGAAGCAGCAGATATGAAGTACCCGTATTTGTGCTTCTGTGTTTaGTGCAAGATACAAAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: LQRGRRVSSEAADMKYPYLCFCV*CKIQSS Trigger: AGAGCTTTGTATCTTGCACCAAACACAGAAGCACAA...ATACGGGTACTTCATATCTGCTGCTTCACTACTGACTCTCCTGCCTCGCTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGGCTGCCATCGTTTCTGACAGAGCATTGTGAGAGTAAATGGGTGGTTTTCAATGAGCTTGGAACTTaGGTTCTTCCAGGCAAATCT | + |
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Preference number: 2 (lower is better) Translates to: PGLPSFLTEHCESKWVVFNELGT*VLPGKS Trigger: AGATTTGCCTGGAAGAACCCAAGTTCCAAGCTCATT...GAAAACCACCCATTTACTCTCACAATGCTCTGTCAGAAACGATGGCAGCCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144267.2 |
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| 3UTR CAA 90 bp | AGTAGTGAAGCAGCAGATATGAAGTACCCGTATCGATACAAAGTTTaGTGCTACAGTTTCAACCTCCCAGTGTTTGCCTGGAGCCTATCC | + |
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Preference number: 2 (lower is better) Translates to: SSEAADMKYPYRYKV*CYSFNLPVFAWSLS Trigger: GGATAGGCTCCAGGCAAACACTGGGAGGTTGAAACTGTAGCACAAAACTTTGTATCGATACGGGTACTTCATATCTGCTGCTTCACTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGAGTCAAAGGAGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGAGTTCACTGAAAAGTTaGGGGCATTCACCAAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: SESKERGLVLLCLVQDTKSSLKS*GHSPSG Trigger: CCCACTTGGTGAATGCCCTCAACTTTTCAGTGAACT...CTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGACTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGGCTGCCATCGTTTCTGACAGAGCATTGTGAGAGTAAATGGGTGGTTTTCTGCTTCTGTGTTTGGTaGAAGATACAAAGCTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: PGLPSFLTEHCESKWVVFCFCVW*KIQSSL Trigger: CAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCA...GAAAACCACCCATTTACTCTCACAATGCTCTGTCAGAAACGATGGCAGCCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144267.2 |
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| 3UTR-3UTR GCA 90 bp | GTCAAAGGAGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTAGGAGAGAGGTCTTGTaGTTCTGTGTTTGGTGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: VKGERSCASVFGARYKALRREVL*FCVWCK Trigger: CTTGCACCAAACACAGAAGCACAAGACCTCTCTCCT...AAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGCGAGGCAGGAGAGTCAGTAGTGAAGCAGCAGATATGAAGTACCCGTATGCACAACCTAGAAAATaGAGTCTGAGTTTCAATGAA | + |
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Preference number: 2 (lower is better) Translates to: LQRGRRVSSEAADMKYPYAQPRK*SLSFNE Trigger: TTCATTGAAACTCAGACTCCATTTTCTAGGTTGTGC...ATACGGGTACTTCATATCTGCTGCTTCACTACTGACTCTCCTGCCTCGCTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTGGTTTTTCAACCTCCCAGTGTTTaGCTGGAGCCTATCCAAATG | + |
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Preference number: 2 (lower is better) Translates to: REVLCFCVWCKIQSSLVFQPPSV*LEPIQM Trigger: CATTTGGATAGGCTCCAGGCAAACACTGGGAGGTTG...AAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCAGCATCTCTTATCTGAAATCAAAGTGAGTCAAAGGAGAGAGGTCTTGTGCCAACCTCCCAGTGTTTaGCTGGAGCCTATCCAAATG | + |
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Preference number: 2 (lower is better) Translates to: IQHLLSEIKVSQRREVLCQPPSV*LEPIQM Trigger: CATTTGGATAGGCTCCAGGCAAACACTGGGAGGTTG...GCACAAGACCTCTCTCCTTTGACTCACTTTGATTTCAGATAAGAGATGCTGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGCGAGGCAGGAGAGTCAGTAGTGAAGCAGCAGATATGAAGTACCCGTATATACTGGCCAGGTCTTaGTTTAAAGTTTTCTTTGAT | + |
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Preference number: 2 (lower is better) Translates to: LQRGRRVSSEAADMKYPYILARS*FKVFFD Trigger: ATCAAAGAAAACTTTAAAGCAAGACCTGGCCAGTAT...ATACGGGTACTTCATATCTGCTGCTTCACTACTGACTCTCCTGCCTCGCTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR CAA 90 bp | CGTATCGATACAAAGTTTTGTGCTACAGTTTCAACCTCCCAGTGTTaGCCTGGAGCCTATCCAAATGAAAGCTACTCCACTTATGCACAA | + |
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Preference number: 2 (lower is better) Translates to: RIDTKFCATVSTSQC*PGAYPNESYSTYAQ Trigger: TTGTGCATAAGTGGAGTAGCTTTCATTTGGATAGGCTCCAGGCAAACACTGGGAGGTTGAAACTGTAGCACAAAACTTTGTATCGATACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR-3UTR TCA 90 bp | GATTGGATGTCTCTGCACACCCAGATAAAGTACAGTCTTCTTAACTTGTATGGTAGTTCACTGAAAAGTTaGGGGCATTCACCAAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: DWMSLHTQIKYSLLNLYGSSLKS*GHSPSG Trigger: CCCACTTGGTGAATGCCCTCAACTTTTCAGTGAACT...ACCATACAAGTTAAGAAGACTGTACTTTATCTGGGTGTGCAGAGACATCCAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000126887.8 ENSMUST00000136577.9 ENSMUST00000144267.2 |
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| 3UTR-3UTR GCA 90 bp | ACCCGTATCGATACAAAGTTTTGTGCTACAGTTTCAACCTCCCAGTGTTTGCCTCAATTTAAAGAGGGCTaGAGCTATCAGCTTCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: TRIDTKFCATVSTSQCLPQFKEG*SYQLQC Trigger: ACACTGAAGCTGATAGCTGCAGCCCTCTTTAAATTG...AGGCAAACACTGGGAGGTTGAAACTGTAGCACAAAACTTTGTATCGATACGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR-3UTR GCA 90 bp | ACCCGTATCGATACAAAGTTTTGTGCTACAGTTTCAACCTCCCAGTGTTTGCCTGTAAGGAATCAGTATTaGACATCAAGCCTGGACAAG | + |
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Preference number: 2 (lower is better) Translates to: TRIDTKFCATVSTSQCLPVRNQY*TSSLDK Trigger: CTTGTCCAGGCTTGATGTGCAATACTGATTCCTTAC...AGGCAAACACTGGGAGGTTGAAACTGTAGCACAAAACTTTGTATCGATACGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 |
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| 3UTR-3UTR GCA 90 bp | GTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTGGTTTTTAAGGATTGTATATCCATACTCTaGTGTGCCAGGGCTGCCATC | + |
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Preference number: 2 (lower is better) Translates to: VLCFCVWCKIQSSLVFKDCISIL*CARAAI Trigger: GATGGCAGCCCTGGCACAGCAGAGTATGGATATACA...ATCCTTAAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144267.2 |
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| 3UTR-3UTR CCA 90 bp | GTCAAAGGAGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTAGACGTAGTCTGGTATaGACATATTCTGGGATGATG | + |
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Preference number: 2 (lower is better) Translates to: VKGERSCASVFGARYKALRRSLV*TYSGMM Trigger: CATCATCCCAGAATATGTCCATACCAGACTACGTCT...AAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR-3UTR CCA 90 bp | GTCAAAGGAGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTAATGAGCTTGGAACTTaGGTTCTTCCAGGCAAATCT | + |
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Preference number: 2 (lower is better) Translates to: VKGERSCASVFGARYKALNELGT*VLPGKS Trigger: AGATTTGCCTGGAAGAACCCAAGTTCCAAGCTCATT...AAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR CAA 90 bp | GTTGCTTTGGTTTCAGTAGGACACAGTAAGAAGGCATGGTTCATCTaGGAAGTATCTTCATGGCATGCAGCATCACTACAGACAAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: VALVSVGHSKKAWFI*EVSSWHAASLQTKK Trigger: TTTCTTTGTCTGTAGTGATGCTGCATGCCATGAAGATACTTCCAAGATGAACCATGCCTTCTTACTGTGTCCTACTGAAACCAAAGCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144267.2 |
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| 3UTR-3UTR TCA 90 bp | AAAATACAGATAGTTACACCACATGTGATGTGTAGAGTCTTGCTTTTATCCAACGCTAGGGACCTTCTGTaGTCCTCGAAGATAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: KIQIVTPHVMCRVLLLSNARDLL*SSKISQ Trigger: CTGGCTTATCTTCGAGGATCACAGAAGGTCCCTAGC...GTTGGATAAAAGCAAGACTCTACACATCACATGTGGTGTAACTATCTGTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000126887.8 ENSMUST00000136577.9 ENSMUST00000144267.2 |
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| 3UTR-3UTR TCA 90 bp | AAGAGGGTTAAAGTAGAATATATGAGAGGCTTGCAGTACTCAATGGGGGTGACCGTGTCTACATTTGTCTaGTACTTCAACAAACCACCT | + |
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Preference number: 2 (lower is better) Translates to: KRVKVEYMRGLQYSMGVTVSTFV*YFNKPP Trigger: AGGTGGTTTGTTGAAGTATCAGACAAATGTAGACAC...GGTCACCCCCATTGAGTACTGCAAGCCTCTCATATATTCTACTTTAACCCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136577.9 |
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| 3UTR-3UTR TCA 90 bp | ACCCGTATCGATACAAAGTTTTGTGCTACAGTTTCAACCTCCCAGTGTTTGCCTGGACATATTCTGGGATaGTGTCTGGTTAAGACTAAT | + |
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Preference number: 2 (lower is better) Translates to: TRIDTKFCATVSTSQCLPGHILG*CLVKTN Trigger: ATTAGTCTTAACCAGACATCATCCCAGAATATGTCC...AGGCAAACACTGGGAGGTTGAAACTGTAGCACAAAACTTTGTATCGATACGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR-3UTR TCA 90 bp | GATTGGATGTCTCTGCACACCCAGATAAAGTACAGTCTTCTTAACTTGTATGGTGGGATGATTGATGACTaGGATGATGGTGACAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: DWMSLHTQIKYSLLNLYGGMIDD*DDGDRF Trigger: AAACCTGTCACCATCATCTCAGTCATCAATCATCCC...ACCATACAAGTTAAGAAGACTGTACTTTATCTGGGTGTGCAGAGACATCCAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126887.8 ENSMUST00000136577.9 ENSMUST00000144267.2 |
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| 3UTR-3UTR GCA 90 bp | ACCCGTATCGATACAAAGTTTTGTGCTACAGTTTCAACCTCCCAGTGTTTGCCTTGCTTCTGTGTTTGGTaGAAGATACAAAGCTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: TRIDTKFCATVSTSQCLPCFCVW*KIQSSL Trigger: CAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCA...AGGCAAACACTGGGAGGTTGAAACTGTAGCACAAAACTTTGTATCGATACGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR-3UTR GCA 90 bp | ACCCGTATCGATACAAAGTTTTGTGCTACAGTTTCAACCTCCCAGTGTTTGCCTCTCATTCTGGTATCTTaGTGCATTCAGTTCAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: TRIDTKFCATVSTSQCLPLILVS*CIQFKE Trigger: TTCCTTGAACTGAATGCAGCAAGATACCAGAATGAG...AGGCAAACACTGGGAGGTTGAAACTGTAGCACAAAACTTTGTATCGATACGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR CAA 90 bp | CCTGAGAAAATACAGATAGTTACACCACATGTGATGTGTAGAGTCTaGCTTTTATCCAACAATCTTCTTGTTCTCCTGCTAGGGACCTTC | + |
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Preference number: 2 (lower is better) Translates to: PEKIQIVTPHVMCRV*LLSNNLLVLLLGTF Trigger: GAAGGTCCCTAGCAGGAGAACAAGAAGATTGTTGGATAAAAGCAAGACTCTACACATCACATGTGGTGTAACTATCTGTATTTTCTCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000126887.8 ENSMUST00000136577.9 ENSMUST00000144267.2 |
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| 3UTR-3UTR TCA 90 bp | GTCAAAGGAGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTCAGCATCTCTTATCTaGAATCAAAGTGAGTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: VKGERSCASVFGARYKALSASLI*NQSESK Trigger: CTTTGACTCACTTTGATTTCAGATAAGAGATGCTGA...AAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR-3UTR TCA 90 bp | GATTGGATGTCTCTGCACACCCAGATAAAGTACAGTCTTCTTAACTTGTATGGTGGCTACATGCACACCTaGGAAAATACAGATAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: DWMSLHTQIKYSLLNLYGGYMHT*ENTDSY Trigger: GTAACTATCTGTATTTTCTCAGGTGTGCATGTAGCC...ACCATACAAGTTAAGAAGACTGTACTTTATCTGGGTGTGCAGAGACATCCAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126887.8 ENSMUST00000136577.9 ENSMUST00000144267.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTGGTTTTTAAGGATATGCAAACCACTGGAATaGTTGGATGTCTCTGCACAC | + |
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Preference number: 2 (lower is better) Translates to: SCASVFGARYKALWFLRICKPLE*LDVSAH Trigger: GTGTGCAGAGACATCCAATCATTCCAGTGGTTTGCA...TATCCTTAAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR-3UTR TCA 90 bp | ACCCGTATCGATACAAAGTTTTGTGCTACAGTTTCAACCTCCCAGTGTTTGCCTAAATTTTGTCCCATATaGGTTGTTCCGGTTACTCAA | + |
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Preference number: 2 (lower is better) Translates to: TRIDTKFCATVSTSQCLPKFCPI*VVPVTQ Trigger: TTGAGTAACCGGAACAACTCATATGGGACAAAATTT...AGGCAAACACTGGGAGGTTGAAACTGTAGCACAAAACTTTGTATCGATACGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTGGTTTTTCAATTTAAAGAGGGCTaGAGCTATCAGCTTCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: REVLCFCVWCKIQSSLVFQFKEG*SYQLQC Trigger: ACACTGAAGCTGATAGCTGCAGCCCTCTTTAAATTG...AAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR-3UTR GCA 90 bp | GATTGGATGTCTCTGCACACCCAGATAAAGTACAGTCTTCTTAACTTGTATGGTCAATTTAAAGAGGGCTaGAGCTATCAGCTTCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: DWMSLHTQIKYSLLNLYGQFKEG*SYQLQC Trigger: ACACTGAAGCTGATAGCTGCAGCCCTCTTTAAATTG...ACCATACAAGTTAAGAAGACTGTACTTTATCTGGGTGTGCAGAGACATCCAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGAGTCAAAGGAGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGATTCTGGTATCTTGCTaGATTCAGTTCAAGGAAATC | + |
|
Preference number: 2 (lower is better) Translates to: SESKERGLVLLCLVQDTKILVSC*IQFKEI Trigger: GATTTCCTTGAACTGAATGCAGCAAGATACCAGAAT...CTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGACTCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCAAAGGAGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTCAGGTCTGTTTTCTTaGCAAAACTTGTTATGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: VKGERSCASVFGARYKALSGLFS*QNLLCN Trigger: GTTGCATAACAAGTTTTGGCAAGAAAACAGACCTGA...AAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCCGTATCGATACAAAGTTTTGTGCTACAGTTTCAACCTCCCAGTGTTTGCCTTCAGGTCTGTTTTCTTaGCAAAACTTGTTATGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: TRIDTKFCATVSTSQCLPSGLFS*QNLLCN Trigger: GTTGCATAACAAGTTTTGGCAAGAAAACAGACCTGA...AGGCAAACACTGGGAGGTTGAAACTGTAGCACAAAACTTTGTATCGATACGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCCGTATCGATACAAAGTTTTGTGCTACAGTTTCAACCTCCCAGTGTTTGCCTTGGAGAATAATATACTaGCCAGGTCTTGCTTTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: TRIDTKFCATVSTSQCLPWRIIY*PGLALK Trigger: CTTTAAAGCAAGACCTGGCCAGTATATTATTCTCCA...AGGCAAACACTGGGAGGTTGAAACTGTAGCACAAAACTTTGTATCGATACGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CCA 90 bp | GATTGGATGTCTCTGCACACCCAGATAAAGTACAGTCTTCTTAACTTGTATGGTTTGGAAGTATCTTCATaGCATGCAGCATCACTACAG | + |
|
Preference number: 2 (lower is better) Translates to: DWMSLHTQIKYSLLNLYGLEVSS*HAASLQ Trigger: CTGTAGTGATGCTGCATGCCATGAAGATACTTCCAA...ACCATACAAGTTAAGAAGACTGTACTTTATCTGGGTGTGCAGAGACATCCAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144267.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTCAGCATCTCTTATCTGAAATCAAAGTGAGTCAAAGGAGAGAGGTCTTGTGCGTGTCTACATTTGTCTaGTACTTCAACAAACCACCT | + |
|
Preference number: 2 (lower is better) Translates to: IQHLLSEIKVSQRREVLCVSTFV*YFNKPP Trigger: AGGTGGTTTGTTGAAGTATCAGACAAATGTAGACAC...GCACAAGACCTCTCTCCTTTGACTCACTTTGATTTCAGATAAGAGATGCTGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTCAGCATCTCTTATCTGAAATCAAAGTGAGTCAAAGGAGAGAGGTCTTGTGCATTACATCAGAGGGATaGTTGATGACTGAGATGATG | + |
|
Preference number: 2 (lower is better) Translates to: IQHLLSEIKVSQRREVLCITSEG*LMTEMM Trigger: CATCATCTCAGTCATCAATCATCCCTCTGATGTAAT...GCACAAGACCTCTCTCCTTTGACTCACTTTGATTTCAGATAAGAGATGCTGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTGGTTTTTCGATACAAAGTTTTGTaGTACAGTTTCAACCTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: REVLCFCVWCKIQSSLVFRYKVL*YSFNLP Trigger: TGGGAGGTTGAAACTGTAGCACAAAACTTTGTATCG...AAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCTTTAAAGTTTTCTTTGATCATACGGAGTTCCATTACATCAGAGGGATGATTAAGTGGGCGGCTACATaGACACCTGAGAAAATACAG | + |
|
Preference number: 2 (lower is better) Translates to: CFKVFFDHTEFHYIRGMIKWAAT*TPEKIQ Trigger: CTGTATTTTCTCAGGTGTGCATGTAGCCGCCCACTT...AATCATCCCTCTGATGTAATGGAACTCCGTATGATCAAAGAAAACTTTAAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000126887.8 ENSMUST00000136577.9 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTGGTTTTTTTGTGCTTCTGTGTTTaGTGCAAGATACAAAGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: REVLCFCVWCKIQSSLVFLCFCV*CKIQSS Trigger: AGAGCTTTGTATCTTGCACCAAACACAGAAGCACAA...AAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCT 40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTGGTTTTTAAGGATTATCTGAAATCAAAGTaGGTCAAAGGAGAGAGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: VLCFCVWCKIQSSLVFKDYLKSK*VKGERS Trigger: AGACCTCTCTCCTTTGACTCACTTTGATTTCAGATA...ATCCTTAAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR TCA 90 bp | GATTGGATGTCTCTGCACACCCAGATAAAGTACAGTCTTCTTAACTTGTATGGTACAAAGAAGAGGTTGTaGGTATACCAGAAGATATCA | + |
|
Preference number: 2 (lower is better) Translates to: DWMSLHTQIKYSLLNLYGTKKRL*VYQKIS Trigger: TGATATCTTCTGGTATACTCACAACCTCTTCTTTGT...ACCATACAAGTTAAGAAGACTGTACTTTATCTGGGTGTGCAGAGACATCCAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126887.8 ENSMUST00000136577.9 ENSMUST00000144267.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTGGTTTTTAAGGATCGATACAAAGTTTTGTaGTACAGTTTCAACCTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: VLCFCVWCKIQSSLVFKDRYKVL*YSFNLP Trigger: TGGGAGGTTGAAACTGTAGCACAAAACTTTGTATCG...ATCCTTAAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTGGTTTTTAAGGATTGCTTCTGTGTTTGGTaGAAGATACAAAGCTCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: VLCFCVWCKIQSSLVFKDCFCVW*KIQSSL Trigger: CAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCA...ATCCTTAAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTCAGCATCTCTTATCTGAAATCAAAGTGAGTCAAAGGAGAGAGGTCTTGTGCATTCTGGTATCTTGCTaGATTCAGTTCAAGGAAATC | + |
|
Preference number: 2 (lower is better) Translates to: IQHLLSEIKVSQRREVLCILVSC*IQFKEI Trigger: GATTTCCTTGAACTGAATGCAGCAAGATACCAGAAT...GCACAAGACCTCTCTCCTTTGACTCACTTTGATTTCAGATAAGAGATGCTGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCTTTAAAGTTTTCTTTGATCATACGGAGTTCCATTACATCAGAGGGATGATTCCAAATCCAGGTCTGTaGGAAATGAGCTTGGAACTT | + |
|
Preference number: 2 (lower is better) Translates to: CFKVFFDHTEFHYIRGMIPNPGL*EMSLEL Trigger: AAGTTCCAAGCTCATTTCCCACAGACCTGGATTTGG...AATCATCCCTCTGATGTAATGGAACTCCGTATGATCAAAGAAAACTTTAAAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126887.8 ENSMUST00000136577.9 ENSMUST00000144267.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTGGTTTTTAAGGATACTCATTCTGGTATCTTaGTGCATTCAGTTCAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: SCASVFGARYKALWFLRILILVS*CIQFKE Trigger: TTCCTTGAACTGAATGCAGCAAGATACCAGAATGAG...TATCCTTAAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR GCA 90 bp | GATTGGATGTCTCTGCACACCCAGATAAAGTACAGTCTTCTTAACTTGTATGGTATTAGAAACTCTTATTaGGTAGGTAGAAGCTGTAAC | + |
|
Preference number: 2 (lower is better) Translates to: DWMSLHTQIKYSLLNLYGIRNSY*VGRSCN Trigger: GTTACAGCTTCTACCTACGCAATAAGAGTTTCTAAT...ACCATACAAGTTAAGAAGACTGTACTTTATCTGGGTGTGCAGAGACATCCAATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126887.8 ENSMUST00000136577.9 ENSMUST00000144267.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTGGTTTTTATTAGAAACTCTTATTaGGTAGGTAGAAGCTGTAAC | + |
|
Preference number: 2 (lower is better) Translates to: REVLCFCVWCKIQSSLVFIRNSY*VGRSCN Trigger: GTTACAGCTTCTACCTACGCAATAAGAGTTTCTAAT...AAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCTTTAAAGTTTTCTTTGATCATACGGAGTTCCATTACATCAGAGGGATGATTATTAGAAACTCTTATTaGGTAGGTAGAAGCTGTAAC | + |
|
Preference number: 2 (lower is better) Translates to: CFKVFFDHTEFHYIRGMIIRNSY*VGRSCN Trigger: GTTACAGCTTCTACCTACGCAATAAGAGTTTCTAAT...AATCATCCCTCTGATGTAATGGAACTCCGTATGATCAAAGAAAACTTTAAAGCA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126887.8 ENSMUST00000136577.9 ENSMUST00000144267.2 |
||
| 3UTR TCA 72 bp | CTCAATGGGGGTGACCTTAGCCAACGTGCCCAACAGTaGGCAGGAGATGGGAACCCTCTGTTACATTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LNGGDLSQRAQQ*AGDGNPLLHFA Trigger: AGCAAAATGTAACAGAGGGTTCCCATCTCCTGCTCACTGTTGGGCACGTTGGCTAAGGTCACCCCCATTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136577.9 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGGCTGCCATCGTTTCTGACAGAGCATTGTGAGAGTAAATGGGTGGTTTTCTTCTTCAGGGCCCCTTaGGCTCGCAGATTAACCATG | + |
|
Preference number: 3 (lower is better) Translates to: PGLPSFLTEHCESKWVVFFFRAP*ARRLTM Trigger: CATGGTTAATCTGCGAGCCAAAGGGGCCCTGAAGAA...GAAAACCACCCATTTACTCTCACAATGCTCTGTCAGAAACGATGGCAGCCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144267.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCAGCGAGGCAGGAGAGTCAGTAGTGAAGCAGCAGATATGAAGTACCCGTATCAAAGGAGAGAGGTCTaGTGCTTCTGTGTTTGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LQRGRRVSSEAADMKYPYQRREV*CFCVWC Trigger: GCACCAAACACAGAAGCACAAGACCTCTCTCCTTTG...ATACGGGTACTTCATATCTGCTGCTTCACTACTGACTCTCCTGCCTCGCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTGAGGGCATTCACCAAGTGGGCGGCTACATGCACACCTGAGAAAATACAGAGGATGAGGCTGCAGTaGAGGTTCAGGACAGATGCA | + |
|
Preference number: 3 (lower is better) Translates to: KLRAFTKWAATCTPEKIQRMRLQ*RFRTDA Trigger: TGCATCTGTCCTGAACCTCAACTGCAGCCTCATCCT...CTGTATTTTCTCAGGTGTGCATGTAGCCGCCCACTTGGTGAATGCCCTCAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126887.8 ENSMUST00000136577.9 ENSMUST00000144267.2 |
||
| 3UTR TCA 72 bp | CAACAATCTTCTTGTTCTCCTGCTAGGGACCTTCTGTaGTCCTCGAAGATAAGCCAGGACTGTCCGGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: QQSSCSPARDLL*SSKISQDCPAH Trigger: ATGTGCCGGACAGTCCTGGCTTATCTTCGAGGATCACAGAAGGTCCCTAGCAGGAGAACAAGAAGATTGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126887.8 ENSMUST00000136577.9 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CAA 90 bp | AATCAAAGTGAGTCAAAGGAGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATTTCTTCAGGGCCCCTTaGGCTCGCAGATTAACCATG | + |
|
Preference number: 3 (lower is better) Translates to: NQSESKERGLVLLCLVQDFFRAP*ARRLTM Trigger: CATGGTTAATCTGCGAGCCAAAGGGGCCCTGAAGAA...ATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGACTCACTTTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCAAAGGAGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTCAACCTCCCAGTGTTaGCCTGGAGCCTATCCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: VKGERSCASVFGARYKALSTSQC*PGAYPN Trigger: ATTTGGATAGGCTCCAGGCAAACACTGGGAGGTTGA...AAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGGTTAAAGTAGAATATATGAGAGGCTTGCAGTACTCAATGGGGGTGACCTTAAGGATGAGGCTGCAGTaGAGGTTCAGGACAGATGCA | + |
|
Preference number: 3 (lower is better) Translates to: RVKVEYMRGLQYSMGVTLRMRLQ*RFRTDA Trigger: TGCATCTGTCCTGAACCTCAACTGCAGCCTCATCCT...TAAGGTCACCCCCATTGAGTACTGCAAGCCTCTCATATATTCTACTTTAACCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136577.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCCGTATCGATACAAAGTTTTGTGCTACAGTTTCAACCTCCCAGTGTTTGCCTCTGTGGGAAATGAGCTaGGAACTTGGGTTCTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TRIDTKFCATVSTSQCLPLWEMS*ELGFFQ Trigger: CTGGAAGAACCCAAGTTCCAAGCTCATTTCCCACAG...AGGCAAACACTGGGAGGTTGAAACTGTAGCACAAAACTTTGTATCGATACGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCAAAGGAGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTCTGTGGGAAATGAGCTaGGAACTTGGGTTCTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: VKGERSCASVFGARYKALLWEMS*ELGFFQ Trigger: CTGGAAGAACCCAAGTTCCAAGCTCATTTCCCACAG...AAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGAGTCAAAGGAGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGATGATGGTGACAGGTTaGTTGCTCCTGATGCATCGG | + |
|
Preference number: 3 (lower is better) Translates to: SESKERGLVLLCLVQDTKMMVTG*LLLMHR Trigger: CCGATGCATCAGGAGCAACAAACCTGTCACCATCAT...CTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGACTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCAGCGAGGCAGGAGAGTCAGTAGTGAAGCAGCAGATATGAAGTACCCGTATATAAATAGCAAACCCTaGGTATTCTTTGGCATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LQRGRRVSSEAADMKYPYINSKP*VFFGIA Trigger: TGCTATGCCAAAGAATACCAAGGGTTTGCTATTTAT...ATACGGGTACTTCATATCTGCTGCTTCACTACTGACTCTCCTGCCTCGCTGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CAA 90 bp | GATTGGATGTCTCTGCACACCCAGATAAAGTACAGTCTTCTTAACTTGTATGGTAGGATGAGGCTGCAGTaGAGGTTCAGGACAGATGCA | + |
|
Preference number: 3 (lower is better) Translates to: DWMSLHTQIKYSLLNLYGRMRLQ*RFRTDA Trigger: TGCATCTGTCCTGAACCTCAACTGCAGCCTCATCCT...ACCATACAAGTTAAGAAGACTGTACTTTATCTGGGTGTGCAGAGACATCCAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126887.8 ENSMUST00000136577.9 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTCAGCATCTCTTATCTGAAATCAAAGTGAGTCAAAGGAGAGAGGTCTTGTGCCAAAGGAGAGAGGTCTaGTGCTTCTGTGTTTGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: IQHLLSEIKVSQRREVLCQRREV*CFCVWC Trigger: GCACCAAACACAGAAGCACAAGACCTCTCTCCTTTG...GCACAAGACCTCTCTCCTTTGACTCACTTTGATTTCAGATAAGAGATGCTGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGAGTCAAAGGAGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCCTCATTCTGGTATCTaGCTGCATTCAGTTCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SESKERGLVLLCLVQDTKPHSGI*LHSVQG Trigger: TCCTTGAACTGAATGCAGCAAGATACCAGAATGAGG...CTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGACTCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCAAAGGAGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTCCTCATTCTGGTATCTaGCTGCATTCAGTTCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VKGERSCASVFGARYKALPHSGI*LHSVQG Trigger: TCCTTGAACTGAATGCAGCAAGATACCAGAATGAGG...AAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CAA 90 bp | GATTGGATGTCTCTGCACACCCAGATAAAGTACAGTCTTCTTAACTTGTATGGTCTGTGGGAAATGAGCTaGGAACTTGGGTTCTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: DWMSLHTQIKYSLLNLYGLWEMS*ELGFFQ Trigger: CTGGAAGAACCCAAGTTCCAAGCTCATTTCCCACAG...ACCATACAAGTTAAGAAGACTGTACTTTATCTGGGTGTGCAGAGACATCCAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126887.8 ENSMUST00000136577.9 ENSMUST00000144267.2 |
||
| 3UTR CCA 72 bp | GTTGCTTTGGTTTCAGTAGGACACAGTAAGAAGGCATaGTTCATCTTGGAAGTATCTTCATGGCATGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VALVSVGHSKKA*FILEVSSWHAA Trigger: TGCTGCATGCCATGAAGATACTTCCAAGATGAACCATGCCTTCTTACTGTGTCCTACTGAAACCAAAGCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144267.2 |
||
| 3UTR TCA 72 bp | GCAGGGTATCACTCCATGAATTCAGCATCTCTTATCTaGAATCAAAGTGAGTCAAAGGAGAGAGGTCTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: AGYHSMNSASLI*NQSESKERGLV Trigger: CACAAGACCTCTCTCCTTTGACTCACTTTGATTTCAGATAAGAGATGCTGAATTCATGGAGTGATACCCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR GCA 72 bp | GAGAAGCTTTCTGGGATCCTCATTCTGGTATCTTGCTaGATTCAGTTCAAGGAAATCTTCACTGTAGTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: EKLSGILILVSC*IQFKEIFTVVH Trigger: GTGAACTACAGTGAAGATTTCCTTGAACTGAATGCAGCAAGATACCAGAATGAGGATCCCAGAAAGCTTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126887.8 ENSMUST00000136577.9 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTGGTTTTTAAGGATATCAACCTCCCAGTGTTaGCCTGGAGCCTATCCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: SCASVFGARYKALWFLRISTSQC*PGAYPN Trigger: ATTTGGATAGGCTCCAGGCAAACACTGGGAGGTTGA...TATCCTTAAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCAAAGGAGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTAGCCATGGGACTAAATaGAACAAATCGGTGATCAAA | + |
|
Preference number: 3 (lower is better) Translates to: VKGERSCASVFGARYKALSHGTK*NKSVIK Trigger: TTTGATCACCGATTTGTTCAATTTAGTCCCATGGCT...AAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTGGTTTTTCTTGTGCTTCTGTGTTaGGTGCAAGATACAAAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: REVLCFCVWCKIQSSLVFLVLLC*VQDTKL Trigger: GAGCTTTGTATCTTGCACCAAACACAGAAGCACAAG...AAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGGGTTAAAGTAGAATATATGAGAGGCTTGCAGTACTCAATGGGGGTGACCGGTGAGTGTCTACATTaGTCTGATACTTCAACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: KRVKVEYMRGLQYSMGVTGECLH*SDTSTN Trigger: GTTTGTTGAAGTATCAGACAAATGTAGACACTCACC...GGTCACCCCCATTGAGTACTGCAAGCCTCTCATATATTCTACTTTAACCCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136577.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGGGTTAAAGTAGAATATATGAGAGGCTTGCAGTACTCAATGGGGGTGACCGTCAGGTCTGTTTTCTaGCCAAAACTTGTTATGCAA | + |
|
Preference number: 3 (lower is better) Translates to: KRVKVEYMRGLQYSMGVTVRSVF*PKLVMQ Trigger: TTGCATAACAAGTTTTGGCAAGAAAACAGACCTGAC...GGTCACCCCCATTGAGTACTGCAAGCCTCTCATATATTCTACTTTAACCCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136577.9 |
||
| 3UTR GCA 72 bp | TCTGAAATCAAAGTGAGTCAAAGGAGAGAGGTCTTGTaGTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SEIKVSQRREVL*FCVWCKIQSSL Trigger: CAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGACTCACTTTGATTTCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR GCA 72 bp | GAAGGCATGGTTCATCTTGGAAGTATCTTCATGGCATaGAGCATCACTACAGACAAAGAAACTGTATATCCA | + |
|
Preference number: 3 (lower is better) Translates to: EGMVHLGSIFMA*SITTDKETVYP Trigger: TGGATATACAGTTTCTTTGTCTGTAGTGATGCTGCATGCCATGAAGATACTTCCAAGATGAACCATGCCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144267.2 |
||
| 3UTR CCA 72 bp | GTGAGTCAAAGGAGAGAGGTCTTGTGCTTCTGTGTTTaGTGCAAGATACAAAGCTCTTTGGTTTTTAAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: VSQRREVLCFCV*CKIQSSLVFKD Trigger: ATCCTTAAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGACTCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CAA 90 bp | AATCAAAGTGAGTCAAAGGAGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATGGTGAGTGTCTACATTaGTCTGATACTTCAACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: NQSESKERGLVLLCLVQDGECLH*SDTSTN Trigger: GTTTGTTGAAGTATCAGACAAATGTAGACACTCACC...ATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGACTCACTTTGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTCAGCATCTCTTATCTGAAATCAAAGTGAGTCAAAGGAGAGAGGTCTTGTGCAAGGCATGGTTCATCTaGGAAGTATCTTCATGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: IQHLLSEIKVSQRREVLCKAWFI*EVSSWH Trigger: ATGCCATGAAGATACTTCCAAGATGAACCATGCCTT...GCACAAGACCTCTCTCCTTTGACTCACTTTGATTTCAGATAAGAGATGCTGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144267.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTGGTTTTTAAGGATACTTGTGCTTCTGTGTTaGGTGCAAGATACAAAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SCASVFGARYKALWFLRILVLLC*VQDTKL Trigger: GAGCTTTGTATCTTGCACCAAACACAGAAGCACAAG...TATCCTTAAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR TCA 72 bp | CTCCATGAATTCAGCATCTCTTATCTGAAATCAAAGTaGGTCAAAGGAGAGAGGTCTTGTGCTTCTGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LHEFSISYLKSK*VKGERSCASVF Trigger: AAACACAGAAGCACAAGACCTCTCTCCTTTGACTCACTTTGATTTCAGATAAGAGATGCTGAATTCATGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR GCA 72 bp | ACTGGGGCAATGGAGAATAATATACTGGCCAGGTCTTaGTTTAAAGTTTTCTTTGATCATACGGAGTTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: TGAMENNILARS*FKVFFDHTEFH Trigger: ATGGAACTCCGTATGATCAAAGAAAACTTTAAAGCAAGACCTGGCCAGTATATTATTCTCCATTGCCCCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000126887.8 ENSMUST00000136577.9 ENSMUST00000144267.2 |
||
| 3UTR CCA 72 bp | AGTAAGAAGGCATGGTTCATCTTGGAAGTATCTTCATaGCATGCAGCATCACTACAGACAAAGAAACTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: SKKAWFILEVSS*HAASLQTKKLY Trigger: ATACAGTTTCTTTGTCTGTAGTGATGCTGCATGCCATGAAGATACTTCCAAGATGAACCATGCCTTCTTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144267.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTCAGCATCTCTTATCTGAAATCAAAGTGAGTCAAAGGAGAGAGGTCTTGTGCTATCGATACAAAGTTTaGTGCTACAGTTTCAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: IQHLLSEIKVSQRREVLCYRYKV*CYSFNL Trigger: GAGGTTGAAACTGTAGCACAAAACTTTGTATCGATA...GCACAAGACCTCTCTCCTTTGACTCACTTTGATTTCAGATAAGAGATGCTGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CAA 90 bp | GATTGGATGTCTCTGCACACCCAGATAAAGTACAGTCTTCTTAACTTGTATGGTTATCGATACAAAGTTTaGTGCTACAGTTTCAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: DWMSLHTQIKYSLLNLYGYRYKV*CYSFNL Trigger: GAGGTTGAAACTGTAGCACAAAACTTTGTATCGATA...ACCATACAAGTTAAGAAGACTGTACTTTATCTGGGTGTGCAGAGACATCCAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTGGTTTTTTATCGATACAAAGTTTaGTGCTACAGTTTCAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: REVLCFCVWCKIQSSLVFYRYKV*CYSFNL Trigger: GAGGTTGAAACTGTAGCACAAAACTTTGTATCGATA...AAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACCTGAGAAAATACAGATAGTTACACCACATGTGATGTGTAGAGTCTTGCTTATAAATAGCAAACCCTaGGTATTCTTTGGCATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TPEKIQIVTPHVMCRVLLINSKP*VFFGIA Trigger: TGCTATGCCAAAGAATACCAAGGGTTTGCTATTTAT...AAGCAAGACTCTACACATCACATGTGGTGTAACTATCTGTATTTTCTCAGGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAATACAGATAGTTACACCACATGTGATGTGTAGAGTCTTGCTTTTATCCAACATAAATAGCAAACCCTaGGTATTCTTTGGCATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: KIQIVTPHVMCRVLLLSNINSKP*VFFGIA Trigger: TGCTATGCCAAAGAATACCAAGGGTTTGCTATTTAT...GTTGGATAAAAGCAAGACTCTACACATCACATGTGGTGTAACTATCTGTATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR CCA 72 bp | TGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTaGTTTTTAAGGATAAGCTTAAAGCACATTTTCATT | + |
|
Preference number: 3 (lower is better) Translates to: CASVFGARYKAL*FLRISLKHIFI Trigger: AATGAAAATGTGCTTTAAGCTTATCCTTAAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| CDS-3UTR TCA 90 bp | CTGCAGCGAGGCAGGAGAGTCAGTAGTGAAGCAGCAGATATGAAGTACCCGTATTGCAAACCACTGGAATaGTTGGATGTCTCTGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LQRGRRVSSEAADMKYPYCKPLE*LDVSAH Trigger: GTGTGCAGAGACATCCAATCATTCCAGTGGTTTGCA...ATACGGGTACTTCATATCTGCTGCTTCACTACTGACTCTCCTGCCTCGCTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032781.14 |
||
| CDS-3UTR CCA 90 bp | ATTCAGCATCTCTTATCTGAAATCAAAGTGAGTCAAAGGAGAGAGGTCTTGTGCAGGGCATTCACCAAGTaGGCGGCTACATGCACACCT | + |
|
Preference number: 4 (lower is better) Translates to: IQHLLSEIKVSQRREVLCRAFTK*AATCTP Trigger: AGGTGTGCATGTAGCCGCCCACTTGGTGAATGCCCT...GCACAAGACCTCTCTCCTTTGACTCACTTTGATTTCAGATAAGAGATGCTGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032781.14 |
||
| CDS-3UTR TCA 90 bp | AGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTGGTTTTTGCTAGGGACCTTCTGTaGTCCTCGAAGATAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: REVLCFCVWCKIQSSLVFARDLL*SSKISQ Trigger: CTGGCTTATCTTCGAGGATCACAGAAGGTCCCTAGC...AAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032781.14 |
||
| CDS-3UTR TCA 90 bp | GTCAAAGGAGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTAGTTCACTGAAAAGTTaGGGGCATTCACCAAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VKGERSCASVFGARYKALSSLKS*GHSPSG Trigger: CCCACTTGGTGAATGCCCTCAACTTTTCAGTGAACT...AAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032781.14 |
||
| CDS-3UTR TCA 90 bp | CTGCAGCGAGGCAGGAGAGTCAGTAGTGAAGCAGCAGATATGAAGTACCCGTATACAAAGAAGAGGTTGTaGGTATACCAGAAGATATCA | + |
|
Preference number: 4 (lower is better) Translates to: LQRGRRVSSEAADMKYPYTKKRL*VYQKIS Trigger: TGATATCTTCTGGTATACTCACAACCTCTTCTTTGT...ATACGGGTACTTCATATCTGCTGCTTCACTACTGACTCTCCTGCCTCGCTGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032781.14 |
||
| 3UTR CAA 72 bp | GCAGCAGATATGAAGTACCCGTATCGATACAAAGTTTaGTGCTACAGTTTCAACCTCCCAGTGTTTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AADMKYPYRYKV*CYSFNLPVFAW Trigger: CCAGGCAAACACTGGGAGGTTGAAACTGTAGCACAAAACTTTGTATCGATACGGGTACTTCATATCTGCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| 3UTR CAA 72 bp | ATGTCTCCACAGTTCAGTCTACATGAGCATTGCACATaGCCCATAGGAGGGATAGGAAAGTGTTCCAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: MSPQFSLHEHCT*PIGGIGKCSKD Trigger: ATCCTTGGAACACTTTCCTATCCCTCCTATGGGCAATGTGCAATGCTCATGTAGACTGAACTGTGGAGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| CDS-3UTR TCA 90 bp | ACCCGTATCGATACAAAGTTTTGTGCTACAGTTTCAACCTCCCAGTGTTTGCCTGGGATGATTGATGACTaGGATGATGGTGACAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TRIDTKFCATVSTSQCLPGMIDD*DDGDRF Trigger: AAACCTGTCACCATCATCTCAGTCATCAATCATCCC...AGGCAAACACTGGGAGGTTGAAACTGTAGCACAAAACTTTGTATCGATACGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032781.14 |
||
| CDS-3UTR GCA 90 bp | AGTGAGTCAAAGGAGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCAGATGCAGATGCTCTaGTTAAACACAATCCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SESKERGLVLLCLVQDTKQMQML*LNTILG Trigger: GCCTAGGATTGTGTTTAAGCAGAGCATCTGCATCTG...CTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGACTCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032781.14 |
||
| CDS-3UTR CCA 90 bp | ACCCGTATCGATACAAAGTTTTGTGCTACAGTTTCAACCTCCCAGTGTTTGCCTCTGGGATCCTCATTCTaGTATCTTGCTGCATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TRIDTKFCATVSTSQCLPLGSSF*YLAAFS Trigger: ACTGAATGCAGCAAGATACCAGAATGAGGATCCCAG...AGGCAAACACTGGGAGGTTGAAACTGTAGCACAAAACTTTGTATCGATACGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032781.14 |
||
| CDS-3UTR GCA 90 bp | ATTCAGCATCTCTTATCTGAAATCAAAGTGAGTCAAAGGAGAGAGGTCTTGTGCAAGTGGGCGGCTACATaGACACCTGAGAAAATACAG | + |
|
Preference number: 4 (lower is better) Translates to: IQHLLSEIKVSQRREVLCKWAAT*TPEKIQ Trigger: CTGTATTTTCTCAGGTGTGCATGTAGCCGCCCACTT...GCACAAGACCTCTCTCCTTTGACTCACTTTGATTTCAGATAAGAGATGCTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032781.14 |
||
| CDS-3UTR TCA 90 bp | AATCAAAGTGAGTCAAAGGAGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATGGACATATTCTGGGATaGTGTCTGGTTAAGACTAAT | + |
|
Preference number: 4 (lower is better) Translates to: NQSESKERGLVLLCLVQDGHILG*CLVKTN Trigger: ATTAGTCTTAACCAGACATCATCCCAGAATATGTCC...ATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGACTCACTTTGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032781.14 |
||
| CDS-3UTR CCA 90 bp | AGTGAGTCAAAGGAGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGTGGAGAATAATATACTaGCCAGGTCTTGCTTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SESKERGLVLLCLVQDTKWRIIY*PGLALK Trigger: CTTTAAAGCAAGACCTGGCCAGTATATTATTCTCCA...CTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGACTCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032781.14 |
||
| CDS-3UTR TCA 90 bp | GTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTGGTTTTTAAGGATTTCACTGTAGTTCACTaGAAAGTTGAGGGCATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VLCFCVWCKIQSSLVFKDFTVVH*KVEGIH Trigger: GTGAATGCCCTCAACTTTTCAGTGAACTACAGTGAA...ATCCTTAAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032781.14 |
||
| CDS-3UTR TCA 90 bp | AGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTGGTTTTTGTGTCTACATTTGTCTaGTACTTCAACAAACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: REVLCFCVWCKIQSSLVFVSTFV*YFNKPP Trigger: AGGTGGTTTGTTGAAGTATCAGACAAATGTAGACAC...AAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032781.14 |
||
| CDS-3UTR CCA 90 bp | TCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTGGTTTTTAAGGATACCAAATCCAGGTCTGTaGGAAATGAGCTTGGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SCASVFGARYKALWFLRIPNPGL*EMSLEL Trigger: AAGTTCCAAGCTCATTTCCCACAGACCTGGATTTGG...TATCCTTAAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032781.14 |
||
| 3UTR CAA 72 bp | TTATCTGAAATCAAAGTGAGTCAAAGGAGAGAGGTCTaGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSEIKVSQRREV*CFCVWCKIQSS Trigger: AGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGACTCACTTTGATTTCAGATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| CDS-3UTR TCA 90 bp | TCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTGGTTTTTAAGGATAGGCTACATGCACACCTaGGAAAATACAGATAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SCASVFGARYKALWFLRIGYMHT*ENTDSY Trigger: GTAACTATCTGTATTTTCTCAGGTGTGCATGTAGCC...TATCCTTAAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032781.14 |
||
| CDS-3UTR CCA 90 bp | TCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTGGTTTTTAAGGATAAGACGTAGTCTGGTATaGACATATTCTGGGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: SCASVFGARYKALWFLRIRRSLV*TYSGMM Trigger: CATCATCCCAGAATATGTCCATACCAGACTACGTCT...TATCCTTAAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032781.14 |
||
| 3UTR CAA 72 bp | ATACAGATAGTTACACCACATGTGATGTGTAGAGTCTaGCTTTTATCCAACAATCTTCTTGTTCTCCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: IQIVTPHVMCRV*LLSNNLLVLLL Trigger: TAGCAGGAGAACAAGAAGATTGTTGGATAAAAGCAAGACTCTACACATCACATGTGGTGTAACTATCTGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126887.8 ENSMUST00000136577.9 ENSMUST00000144267.2 |
||
| CDS-3UTR TCA 90 bp | TCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTGGTTTTTAAGGATAAAATTTTGTCCCATATaGGTTGTTCCGGTTACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SCASVFGARYKALWFLRIKFCPI*VVPVTQ Trigger: TTGAGTAACCGGAACAACTCATATGGGACAAAATTT...TATCCTTAAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032781.14 |
||
| CDS-3UTR GCA 90 bp | TCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTGGTTTTTAAGGATAATTCTGGTATCTTGCTaGATTCAGTTCAAGGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: SCASVFGARYKALWFLRIILVSC*IQFKEI Trigger: GATTTCCTTGAACTGAATGCAGCAAGATACCAGAAT...TATCCTTAAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032781.14 |
||
| CDS-3UTR GCA 90 bp | TCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTGGTTTTTAAGGATAATACTGGCCAGGTCTTaGTTTAAAGTTTTCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SCASVFGARYKALWFLRIILARS*FKVFFD Trigger: ATCAAAGAAAACTTTAAAGCAAGACCTGGCCAGTAT...TATCCTTAAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032781.14 |
||
| 3UTR CAA 72 bp | TTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTaGGTTTTTAAGGATAAGCTTAAAGCACATTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LCFCVWCKIQSS*VFKDKLKAHFH Trigger: ATGAAAATGTGCTTTAAGCTTATCCTTAAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
||
| CDS GCA 90 bp | CCAGCCAGCTCCTCCAGGACACCGCCATGCCGCCGGCGCGGGGAGTaGTGCGCCCTGCTCGGTGCTCAGGACCGAAAGGAGCGATCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PASSSRTPPCRRRGE*CALLGAQDRKERSV Trigger: CACTGATCGCTCCTTTCGGTCCTGAGCACCGAGCAGGGCGCAGCACTCCCCGCGCCGGCGGCATGGCGGTGTCCTGGAGGAGCTGGCTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124057.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAGCGAGGCAGGAGAGTCAGTAGTGAAGCAGCAGATATGAAGTACCCGTATATGATGGTGACAGGTTaGTTGCTCCTGATGCATCGG | + |
|
Preference number: 5 (lower is better) Translates to: LQRGRRVSSEAADMKYPYMMVTG*LLLMHR Trigger: CCGATGCATCAGGAGCAACAAACCTGTCACCATCAT...ATACGGGTACTTCATATCTGCTGCTTCACTACTGACTCTCCTGCCTCGCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032781.14 |
||
| CDS-3UTR CAA 90 bp | CCAGGGCTGCCATCGTTTCTGACAGAGCATTGTGAGAGTAAATGGGTGGTTTTCTATTCTGGCCCTTGGTaGTACAGCAGGAAGGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PGLPSFLTEHCESKWVVFYSGPW*YSRKVF Trigger: GAAAACCTTCCTGCTGTACAACCAAGGGCCAGAATA...GAAAACCACCCATTTACTCTCACAATGCTCTGTCAGAAACGATGGCAGCCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144267.2 |
||
| CDS-3UTR CAA 90 bp | ACCCGTATCGATACAAAGTTTTGTGCTACAGTTTCAACCTCCCAGTGTTTGCCTAGGATGAGGCTGCAGTaGAGGTTCAGGACAGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: TRIDTKFCATVSTSQCLPRMRLQ*RFRTDA Trigger: TGCATCTGTCCTGAACCTCAACTGCAGCCTCATCCT...AGGCAAACACTGGGAGGTTGAAACTGTAGCACAAAACTTTGTATCGATACGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032781.14 |
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| CDS-3UTR CAA 90 bp | AGTGAGTCAAAGGAGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGTATTCTGGCCCTTGGTaGTACAGCAGGAAGGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: SESKERGLVLLCLVQDTKYSGPW*YSRKVF Trigger: GAAAACCTTCCTGCTGTACAACCAAGGGCCAGAATA...CTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGACTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032781.14 ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| CDS-3UTR CAA 90 bp | AAGAGGGTTAAAGTAGAATATATGAGAGGCTTGCAGTACTCAATGGGGGTGACCTATTCTGGCCCTTGGTaGTACAGCAGGAAGGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: KRVKVEYMRGLQYSMGVTYSGPW*YSRKVF Trigger: GAAAACCTTCCTGCTGTACAACCAAGGGCCAGAATA...GGTCACCCCCATTGAGTACTGCAAGCCTCTCATATATTCTACTTTAACCCTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136577.9 |
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| CDS-3UTR CAA 90 bp | TGTAGAGTCTTGCTTTTATCCAACAATCTTCTTGTTCTCCTGCTAGGGACCTTCTATTCTGGCCCTTGGTaGTACAGCAGGAAGGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: CRVLLLSNNLLVLLLGTFYSGPW*YSRKVF Trigger: GAAAACCTTCCTGCTGTACAACCAAGGGCCAGAATA...GAAGGTCCCTAGCAGGAGAACAAGAAGATTGTTGGATAAAAGCAAGACTCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000126887.8 ENSMUST00000136577.9 ENSMUST00000144267.2 |
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| CDS-3UTR CAA 90 bp | ACCCGTATCGATACAAAGTTTTGTGCTACAGTTTCAACCTCCCAGTGTTTGCCTCCTCATTCTGGTATCTaGCTGCATTCAGTTCAAGGA | + |
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Preference number: 5 (lower is better) Translates to: TRIDTKFCATVSTSQCLPPHSGI*LHSVQG Trigger: TCCTTGAACTGAATGCAGCAAGATACCAGAATGAGG...AGGCAAACACTGGGAGGTTGAAACTGTAGCACAAAACTTTGTATCGATACGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032781.14 |
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| CDS-3UTR CAA 90 bp | ATTCAGCATCTCTTATCTGAAATCAAAGTGAGTCAAAGGAGAGAGGTCTTGTGCCTGTGGGAAATGAGCTaGGAACTTGGGTTCTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: IQHLLSEIKVSQRREVLCLWEMS*ELGFFQ Trigger: CTGGAAGAACCCAAGTTCCAAGCTCATTTCCCACAG...GCACAAGACCTCTCTCCTTTGACTCACTTTGATTTCAGATAAGAGATGCTGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032781.14 |
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| CDS-3UTR CAA 90 bp | AGTGAGTCAAAGGAGAGAGGTCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGGGTGAGTGTCTACATTaGTCTGATACTTCAACAAAC | + |
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Preference number: 5 (lower is better) Translates to: SESKERGLVLLCLVQDTKGECLH*SDTSTN Trigger: GTTTGTTGAAGTATCAGACAAATGTAGACACTCACC...CTTTGTATCTTGCACCAAACACAGAAGCACAAGACCTCTCTCCTTTGACTCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032781.14 |
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| CDS-3UTR CAA 90 bp | AGAAGCTTTCTGGGATCCTCATTCTGGTATCTTGCTGCATTCAGTTCAAGGAAAACAATCGCCCAACATTaGGTGAATGTAGTAGTATTC | + |
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Preference number: 5 (lower is better) Translates to: RSFLGSSFWYLAAFSSRKTIAQH*VNVVVF Trigger: GAATACTACTACATTCACCAAATGTTGGGCGATTGT...TTTCCTTGAACTGAATGCAGCAAGATACCAGAATGAGGATCCCAGAAAGCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126887.8 ENSMUST00000136577.9 ENSMUST00000144267.2 |
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| CDS-3UTR CAA 90 bp | ATTCAGCATCTCTTATCTGAAATCAAAGTGAGTCAAAGGAGAGAGGTCTTGTGCACAATCGCCCAACATTaGGTGAATGTAGTAGTATTC | + |
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Preference number: 5 (lower is better) Translates to: IQHLLSEIKVSQRREVLCTIAQH*VNVVVF Trigger: GAATACTACTACATTCACCAAATGTTGGGCGATTGT...GCACAAGACCTCTCTCCTTTGACTCACTTTGATTTCAGATAAGAGATGCTGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126887.8 ENSMUST00000144267.2 |
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| CDS-3UTR CAA 90 bp | ACACCTGAGAAAATACAGATAGTTACACCACATGTGATGTGTAGAGTCTTGCTTACAATCGCCCAACATTaGGTGAATGTAGTAGTATTC | + |
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Preference number: 5 (lower is better) Translates to: TPEKIQIVTPHVMCRVLLTIAQH*VNVVVF Trigger: GAATACTACTACATTCACCAAATGTTGGGCGATTGT...AAGCAAGACTCTACACATCACATGTGGTGTAACTATCTGTATTTTCTCAGGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126887.8 ENSMUST00000136577.9 ENSMUST00000144267.2 |
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| CDS-3UTR CAA 90 bp | TCTTGTGCTTCTGTGTTTGGTGCAAGATACAAAGCTCTTTGGTTTTTAAGGATAGTCAGGTCTGTTTTCTaGCCAAAACTTGTTATGCAA | + |
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Preference number: 5 (lower is better) Translates to: SCASVFGARYKALWFLRIVRSVF*PKLVMQ Trigger: TTGCATAACAAGTTTTGGCAAGAAAACAGACCTGAC...TATCCTTAAAAACCAAAGAGCTTTGTATCTTGCACCAAACACAGAAGCACAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032781.14 |
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| CDS GCA 72 bp | CACCGCCATGCCGCCGGCGCGGGGAGTGCTGCGCCCTaGTCGGTGCTCAGGACCGAAAGGAGCGATCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: HRHAAGAGSAAP*SVLRTERSDQW Trigger: CCACTGATCGCTCCTTTCGGTCCTGAGCACCGAGCAGGGCGCAGCACTCCCCGCGCCGGCGGCATGGCGGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124057.8 |
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| CDS GCA 72 bp | TCCAGGACACCGCCATGCCGCCGGCGCGGGGAGTGCTaGGCCCTGCTCGGTGCTCAGGACCGAAAGGAGCGA | + |
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Preference number: 6 (lower is better) Translates to: SRTPPCRRRGEC*ALLGAQDRKER Trigger: TCGCTCCTTTCGGTCCTGAGCACCGAGCAGGGCGCAGCACTCCCCGCGCCGGCGGCATGGCGGTGTCCTGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124057.8 |
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| CDS GCA 72 bp | TCCTCCAGGACACCGCCATGCCGCCGGCGCGGGGAGTaGTGCGCCCTGCTCGGTGCTCAGGACCGAAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: SSRTPPCRRRGE*CALLGAQDRKE Trigger: CTCCTTTCGGTCCTGAGCACCGAGCAGGGCGCAGCACTCCCCGCGCCGGCGGCATGGCGGTGTCCTGGAGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124057.8 |
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| CDS CCA 72 bp | ACAATCGCCCAACATTTGGTGAATGTAGTAGTATTCTaGCCCTTGGTTGTACAGCAGGAAGGTTTTCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: TIAQHLVNVVVF*PLVVQQEGFPE Trigger: TTCTGGAAAACCTTCCTGCTGTACAACCAAGGGCCAGAATACTACTACATTCACCAAATGTTGGGCGATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126887.8 ENSMUST00000136577.9 ENSMUST00000144267.2 |
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