Pregenerated sensors for NOX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031257Ensembl transcript IDs: ENSMUST00000033610.13, ENSMUST00000113275.10, ENSMUST00000159231.3, ENSMUST00000159259.3, ENSMUST00000162833.8
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | ACTCATGTAACAATGTACTTAGTGGGTGATATGGGAGTGGGAAGCTaGGTCGTTCTATGTTGTTTATTTATGATTGTTGTTCTGTCGTGG | + |
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Preference number: 2 (lower is better) Translates to: THVTMYLVGDMGVGS*VVLCCLFMIVVLSW Trigger: CCACGACAGAACAACAATCATAAATAAACAACATAGAACGACCAAGCTTCCCACTCCCATATCACCCACTAAGTACATTGTTACATGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
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| 3UTR TCA 72 bp | CACTGGATTAACTCATGTAACAATGTACTTAGTGGGTaGTATGGGAGTGGGAAGCTTGGTCGTTCTATGTTG | + |
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Preference number: 3 (lower is better) Translates to: HWINSCNNVLSG*YGSGKLGRSML Trigger: CAACATAGAACGACCAAGCTTCCCACTCCCATATCACCCACTAAGTACATTGTTACATGAGTTAATCCAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
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| CDS-3UTR TCA 90 bp | ACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCCTCCGGGTGCCCCGCAAAATaGGGATGCCTGCAACTCCCC | + |
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Preference number: 4 (lower is better) Translates to: TPKLVKSKGKCGSCAASSGCPAK*GCLQLP Trigger: GGGGAGTTGCAGGCATCCTCATTTTGCGGGGCACCC...GGAGGAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR TCA 90 bp | ACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCCTCCAAGCTCTCCTCTGTTTaGCCCCGGACAATCCCACCC | + |
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Preference number: 4 (lower is better) Translates to: TPKLVKSKGKCGSCAASSKLSSV*PRTIPP Trigger: GGGTGGGATTGTCCGGGGTCAAACAGAGGAGAGCTT...GGAGGAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR TCA 90 bp | CTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCCAAGCTCTCCTCTGTTTaGCCCCGGACAATCCCACCC | + |
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Preference number: 4 (lower is better) Translates to: LTPKLVKSKGKCGSCAASKLSSV*PRTIPP Trigger: GGGTGGGATTGTCCGGGGTCAAACAGAGGAGAGCTT...GGAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR GCA 90 bp | ACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCCTCCAGTGACCCCAATCCCTaGCCCAACCAGTACAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TPKLVKSKGKCGSCAASSSDPNP*PNQYSH Trigger: GTGGCTGTACTGGTTGGGGCAGGGATTGGGGTCACT...GGAGGAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR TCA 90 bp | CTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCCGAGCAGAAGTCAGAGTaGAGGGATGCCACTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTPKLVKSKGKCGSCAASEQKSE*RDATPG Trigger: TCCTGGAGTGGCATCCCTTCACTCTGACTTCTGCTC...GGAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR TCA 90 bp | GACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCCTCAGACTCGAGTATCGCTaGCAGCGTTTGCGCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DPQVSEEQRKVWKLCCFLRLEYR*QRLRRL Trigger: AAGCCTGCGCAAACGCTGTCAGCGATACTCGAGTCT...GAGGAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR CCA 90 bp | ACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCCTCCCGTCCACCTCGATCCTaGGCATTGGTGAGTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TPKLVKSKGKCGSCAASSRPPRS*ALVSAV Trigger: AACAGCACTCACCAATGCCCAGGATCGAGGTGGACG...GGAGGAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR TCA 90 bp | GGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGGGGTGCCCCGCAAAATaGGGATGCCTGCAACTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GYLVTDPQVSEEQRKVWKGCPAK*GCLQLP Trigger: GGGGAGTTGCAGGCATCCTCATTTTGCGGGGCACCC...CTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR TCA 90 bp | ACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCCTCCTGCTATCCCAGCCAGTaGGGAAGAGACGGTAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TPKLVKSKGKCGSCAASSCYPSQ*GRDGSL Trigger: TAAACTACCGTCTCTTCCTCACTGGCTGGGATAGCA...GGAGGAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
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| CDS-3UTR TCA 90 bp | GACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCCTCCAGCCTTTTGTGTTTTaGGCTTGTTGTCGGCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: DPQVSEEQRKVWKLCCFLQPFVF*ACCRHA Trigger: AGCGTGCCGACAACAAGCTCAAAACACAAAAGGCTG...GAGGAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113275.10 |
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| CDS-3UTR GCA 90 bp | CTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCCGTCAGAGTGAAGGGATaGCACTCCAGGAAGGAAATG | + |
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Preference number: 4 (lower is better) Translates to: LTPKLVKSKGKCGSCAASVRVKG*HSRKEM Trigger: CATTTCCTTCCTGGAGTGGCATCCCTTCACTCTGAC...GGAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR CCA 90 bp | CAATTCATGTGTTTTGCACTTGTGAATTATGCAGCTCTCAGGTCGGCCAAGCCCCGTCCACCTCGATCCTaGGCATTGGTGAGTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QFMCFALVNYAALRSAKPRPPRS*ALVSAV Trigger: AACAGCACTCACCAATGCCCAGGATCGAGGTGGACG...GGGCTTGGCCGACCTGAGAGCTGCATAATTCACAAGTGCAAAACACATGAATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
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| CDS-3UTR CCA 90 bp | GACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCCTCACCGCAGACTTGGGGTaGGCAGTAGCTATTCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: DPQVSEEQRKVWKLCCFLTADLG*AVAILE Trigger: TTCTAGAATAGCTACTGCCCACCCCAAGTCTGCGGT...GAGGAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR TCA 90 bp | GACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCCTCGATCCTGGGCATTGGTaGGTGCTGTTGTTCAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: DPQVSEEQRKVWKLCCFLDPGHW*VLLFKC Trigger: ACATTTGAACAACAGCACTCACCAATGCCCAGGATC...GAGGAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR GCA 90 bp | AATTGTGCAAGTGTCAGCCAGCAAAATTCAGCTAAAGGCAGGTTCCCAGGATTTCAAGCACAGAGCAGATaGTCTGGCCAAGGCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NCASVSQQNSAKGRFPGFQAQSR*SGQGQG Trigger: GCCTTGGCCTTGGCCAGAGCATCTGCTCTGTGCTTG...AAATCCTGGGAACCTGCCTTTAGCTGAATTTTGCTGGCTGACACTTGCACAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
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| CDS-3UTR GCA 90 bp | AAGGGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGCAAGCACAGAGCAGATaGTCTGGCCAAGGCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KGYLVTDPQVSEEQRKVWQAQSR*SGQGQG Trigger: GCCTTGGCCTTGGCCAGAGCATCTGCTCTGTGCTTG...CCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR GCA 90 bp | CCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCCTCCAAGTTCTCAGTGTACGGTTaGAAAATGAGCAGGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PKLVKSKGKCGSCAASSKFSVYG*KMSRCP Trigger: GGGGCACCTGCTCATTTTGCAACCGTACACTGAGAA...CTTGGAGGAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR GCA 90 bp | CTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTCGTGTCCAGTCCCCTaGTGCTCGAATATGAACGGA | + |
|
Preference number: 4 (lower is better) Translates to: LVTDPQVSEEQRKVWKLCSCPVP*CSNMNG Trigger: TCCGTTCATATTCGAGCAGCAGGGGACTGGACACGA...GCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR GCA 90 bp | GAGGCAAAGGGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAAGTGACCCCAATCCCTaGCCCAACCAGTACAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EAKGYLVTDPQVSEEQRKSDPNP*PNQYSH Trigger: GTGGCTGTACTGGTTGGGGCAGGGATTGGGGTCACT...TTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACCCTTTGCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR GCA 90 bp | CAATTCATGTGTTTTGCACTTGTGAATTATGCAGCTCTCAGGTCGGCCAAGCCCTTTGCGCAGGCTTTTTaGCAAAGTCCGAGGGCCACA | + |
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Preference number: 4 (lower is better) Translates to: QFMCFALVNYAALRSAKPFAQAF*QSPRAT Trigger: TGTGGCCCTCGGACTTTGGCAAAAAGCCTGCGCAAA...GGGCTTGGCCGACCTGAGAGCTGCATAATTCACAAGTGCAAAACACATGAATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
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| CDS-3UTR TCA 90 bp | GAGGCAAAGGGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGAGCAGAAGTCAGAGTaGAGGGATGCCACTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EAKGYLVTDPQVSEEQRKEQKSE*RDATPG Trigger: TCCTGGAGTGGCATCCCTTCACTCTGACTTCTGCTC...TTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACCCTTTGCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR GCA 90 bp | CTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCCCCAAAGGAAGTTTTCTaGTTCAGACCTGTCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: LTPKLVKSKGKCGSCAASPKEVF*FRPVRM Trigger: CATCCTGACAGGTCTGAAGCAGAAAACTTCCTTTGG...GGAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR GCA 90 bp | CTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCATCGCTGACAGCGTTTaGGCAGGCTTTTTGCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: LVTDPQVSEEQRKVWKLCIADSV*AGFLPK Trigger: CTTTGGCAAAAAGCCTGCGCAAACGCTGTCAGCGAT...GCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR CCA 90 bp | ACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCCTCCGAGGTTGTGATCCAATaGCTTTCTCAGTGTACGGTT | + |
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Preference number: 4 (lower is better) Translates to: TPKLVKSKGKCGSCAASSEVVIQ*LSQCTV Trigger: AACCGTACACTGAGAAAGCCATTGGATCACAACCTC...GGAGGAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR GCA 90 bp | AAGGGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGTCGTGTCCAGTCCCCTaGTGCTCGAATATGAACGGA | + |
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Preference number: 4 (lower is better) Translates to: KGYLVTDPQVSEEQRKVWSCPVP*CSNMNG Trigger: TCCGTTCATATTCGAGCAGCAGGGGACTGGACACGA...CCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR GCA 90 bp | CCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCCTCCAACCAAAGGAAGTTTTCTaGTTCAGACCTGTCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: PQVSEEQRKVWKLCCFLQPKEVF*FRPVRM Trigger: CATCCTGACAGGTCTGAAGCAGAAAACTTCCTTTGG...TTGGAGGAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR GCA 90 bp | GAGGCAAAGGGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAATTTGCGCAGGCTTTTTaGCAAAGTCCGAGGGCCACA | + |
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Preference number: 4 (lower is better) Translates to: EAKGYLVTDPQVSEEQRKFAQAF*QSPRAT Trigger: TGTGGCCCTCGGACTTTGGCAAAAAGCCTGCGCAAA...TTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACCCTTTGCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR TCA 90 bp | ACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCAATTCAATAAGTTGTTaGACCAGGCAAAGGCACCTG | + |
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Preference number: 4 (lower is better) Translates to: TDPQVSEEQRKVWKLCCFNSISC*TRQRHL Trigger: CAGGTGCCTTTGCCTGGTTCAACAACTTATTGAATT...GAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
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| CDS-3UTR GCA 90 bp | AAGGGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGTGCAAAATGAGCAGGTaGCCCTCAAGAAGGACAGCA | + |
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Preference number: 4 (lower is better) Translates to: KGYLVTDPQVSEEQRKVWCKMSR*PSRRTA Trigger: TGCTGTCCTTCTTGAGGGGCACCTGCTCATTTTGCA...CCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR GCA 90 bp | GACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCCTCTATGCAGATCATATATaGCACCAGCTTATGGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: DPQVSEEQRKVWKLCCFLYADHI*HQLMEG Trigger: ACCTTCCATAAGCTGGTGGCATATATGATCTGCATA...GAGGAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR GCA 90 bp | GACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCCTCATAAAAAGCAATCGGTaGAAGGATCCACTTCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: DPQVSEEQRKVWKLCCFLIKSNR*KDPLPR Trigger: TCTTGGAAGTGGATCCTTGCACCGATTGCTTTTTAT...GAGGAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR GCA 90 bp | GGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGGTCAGAGTGAAGGGATaGCACTCCAGGAAGGAAATG | + |
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Preference number: 4 (lower is better) Translates to: GYLVTDPQVSEEQRKVWKVRVKG*HSRKEM Trigger: CATTTCCTTCCTGGAGTGGCATCCCTTCACTCTGAC...CTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR GCA 90 bp | AAGGGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGTGTCCAGTCCCCTGCTaGTCGAATATGAACGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: KGYLVTDPQVSEEQRKVWCPVPC*SNMNGE Trigger: TTCTCCGTTCATATTCGAGCAGCAGGGGACTGGACA...CCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR GCA 90 bp | GGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGTGTCCAGTCCCCTGCTaGTCGAATATGAACGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: GYLVTDPQVSEEQRKVWKCPVPC*SNMNGE Trigger: TTCTCCGTTCATATTCGAGCAGCAGGGGACTGGACA...CTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR GCA 90 bp | TATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGATCGCTGACAGCGTTTaGGCAGGCTTTTTGCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: YLVTDPQVSEEQRKVWKLIADSV*AGFLPK Trigger: CTTTGGCAAAAAGCCTGCGCAAACGCTGTCAGCGAT...CAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR CCA 90 bp | CTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCCTGTTTGGAGACTGGATaGGATTTAGCCAAGAATCTT | + |
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Preference number: 4 (lower is better) Translates to: LTPKLVKSKGKCGSCAASCLETG*DLAKNL Trigger: AAGATTCTTGGCTAAATCCCATCCAGTCTCCAAACA...GGAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR CCA 90 bp | GTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCCTCATTGTCCCACATTaGTCTCCCAAAGGAAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: VTDPQVSEEQRKVWKLCCLIVPH*SPKGSF Trigger: AAAACTTCCTTTGGGAGACCAATGTGGGACAATGAG...GCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR TCA 90 bp | GACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCCTCAGGTGTGCAATGATATaGATAACTGTGAATATGCAG | + |
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Preference number: 4 (lower is better) Translates to: DPQVSEEQRKVWKLCCFLRCAMI*ITVNMQ Trigger: CTGCATATTCACAGTTATTCATATCATTGCACACCT...GAGGAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR TCA 90 bp | GGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGGATCCTGGGCATTGGTaGGTGCTGTTGTTCAAATGT | + |
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Preference number: 4 (lower is better) Translates to: GYLVTDPQVSEEQRKVWKDPGHW*VLLFKC Trigger: ACATTTGAACAACAGCACTCACCAATGCCCAGGATC...CTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR TCA 90 bp | GTCAGGCCTTTCCAGTTATTCCAAACAATACAAAGTGACAATATAGTTGGCTTCAGACTCGAGTATCGCTaGCAGCGTTTGCGCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VRPFQLFQTIQSDNIVGFRLEYR*QRLRRL Trigger: AAGCCTGCGCAAACGCTGTCAGCGATACTCGAGTCT...GAAGCCAACTATATTGTCACTTTGTATTGTTTGGAATAACTGGAAAGGCCTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
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| CDS-3UTR CCA 90 bp | GCAAAGGGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGAAAACTGAGAGCCAGTaGTTAACCAGCCAGTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AKGYLVTDPQVSEEQRKVKTESQ*LTSQFP Trigger: GGGAAACTGGCTGGTTAACCACTGGCTCTCAGTTTT...CACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACCCTTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR CCA 90 bp | CCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCCTCCAAACTCCAGGAAGGAAATaGAGGGGCAATTTACAAATA | + |
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Preference number: 4 (lower is better) Translates to: PQVSEEQRKVWKLCCFLQTPGRK*RGNLQI Trigger: TATTTGTAAATTGCCCCTCCATTTCCTTCCTGGAGT...TTGGAGGAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
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| CDS-3UTR CCA 90 bp | AGACACCTGATGTTAAATTGTGCAAGTGTCAGCCAGCAAAATTCAGCTAAAGGCACCGCAGACTTGGGGTaGGCAGTAGCTATTCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RHLMLNCASVSQQNSAKGTADLG*AVAILE Trigger: TTCTAGAATAGCTACTGCCCACCCCAAGTCTGCGGT...GCCTTTAGCTGAATTTTGCTGGCTGACACTTGCACAATTTAACATCAGGTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
||
| CDS-3UTR TCA 90 bp | AAGGGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGCCTGCTGCTCGAATATaGACGGAGAAAAATTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGYLVTDPQVSEEQRKVWPAARI*TEKNSS Trigger: GGAAGAATTTTTCTCCGTTCATATTCGAGCAGCAGG...CCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
||
| CDS-3UTR TCA 90 bp | GCAAAGGGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGAGATCTTTTGTGTTTTaGGCTTGTTGTCGGCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: AKGYLVTDPQVSEEQRKVRSFVF*ACCRHA Trigger: AGCGTGCCGACAACAAGCTCAAAACACAAAAGATCT...CACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACCCTTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
||
| CDS-3UTR CCA 90 bp | AAGGGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGGAGGTTGTGATCCAATaGCTTTCTCAGTGTACGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KGYLVTDPQVSEEQRKVWEVVIQ*LSQCTV Trigger: AACCGTACACTGAGAAAGCCATTGGATCACAACCTC...CCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
||
| CDS-3UTR CCA 90 bp | CAATTCATGTGTTTTGCACTTGTGAATTATGCAGCTCTCAGGTCGGCCAAGCCCGAAAAATTCTTCCTCTaGAGCAGAAGTCAGAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QFMCFALVNYAALRSAKPEKFFL*SRSQSE Trigger: TTCACTCTGACTTCTGCTCCAGAGGAAGAATTTTTC...GGGCTTGGCCGACCTGAGAGCTGCATAATTCACAAGTGCAAAACACATGAATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
||
| CDS-3UTR TCA 90 bp | GAGGCAAAGGGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAAAGTTTAATGCTGCATaGCCAGCAATGTTGCTATCC | + |
|
Preference number: 4 (lower is better) Translates to: EAKGYLVTDPQVSEEQRKKFNAA*PAMLLS Trigger: GGATAGCAACATTGCTGGTCATGCAGCATTAAACTT...TTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACCCTTTGCCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
||
| CDS-3UTR GCA 90 bp | GTCAGGCCTTTCCAGTTATTCCAAACAATACAAAGTGACAATATAGTTGGCTTCTGCAAAATGAGCAGGTaGCCCTCAAGAAGGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VRPFQLFQTIQSDNIVGFCKMSR*PSRRTA Trigger: TGCTGTCCTTCTTGAGGGGCACCTGCTCATTTTGCA...GAAGCCAACTATATTGTCACTTTGTATTGTTTGGAATAACTGGAAAGGCCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
||
| CDS-3UTR CCA 90 bp | GTCAGGCCTTTCCAGTTATTCCAAACAATACAAAGTGACAATATAGTTGGCTTCCAGGATGAGATAGGCTaGAGAGAACAGAAGCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VRPFQLFQTIQSDNIVGFQDEIG*REQKRE Trigger: CTCTCGCTTCTGTTCTCTCCAGCCTATCTCATCCTG...GAAGCCAACTATATTGTCACTTTGTATTGTTTGGAATAACTGGAAAGGCCTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
||
| CDS-3UTR CCA 90 bp | GGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGACAGCCACTTCATACTaGAAAACATCCTCACTGACT | + |
|
Preference number: 4 (lower is better) Translates to: GYLVTDPQVSEEQRKVWKTATSY*KTSSLT Trigger: AGTCAGTGAGGATGTTTTCCAGTATGAAGTGGCTGT...CTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
||
| CDS-3UTR CCA 90 bp | GGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGTTGTTGTCGGCACGCTaGAATTTGTACCAGATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GYLVTDPQVSEEQRKVWKLLSAR*NLYQID Trigger: ATCTATCTGGTACAAATTCCAGCGTGCCGACAACAA...CTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
||
| CDS-3UTR CCA 90 bp | TATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGCTGTCAGGATGTCAGTaGCTCTGTCAAAGTTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: YLVTDPQVSEEQRKVWKLLSGCQ*LCQSLM Trigger: CATTAAACTTTGACAGAGCCACTGACATCCTGACAG...CAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
||
| CDS-3UTR TCA 90 bp | GGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGAAGTTTAATGCTGCATaGCCAGCCTTTTGTGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GYLVTDPQVSEEQRKVWKKFNAA*PAFCVL Trigger: CAAAACACAAAAGGCTGGTCATGCAGCATTAAACTT...CTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113275.10 |
||
| CDS-3UTR GCA 90 bp | GGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGATAAAAAGCAATCGGTaGAAGGATCCACTTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GYLVTDPQVSEEQRKVWKIKSNR*KDPLPR Trigger: TCTTGGAAGTGGATCCTTGCACCGATTGCTTTTTAT...CTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
||
| CDS-3UTR GCA 90 bp | GGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCCTCGCTTCCTCATCTaGAATTCCAAAACATTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GYLVTDPQVSEEQRKVWKPRFLI*NSKTLD Trigger: ATCTAATGTTTTGGAATTGCAGATGAGGAAGCGAGG...CTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
||
| CDS-3UTR GCA 90 bp | AAGGGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGCCTCGCTTCCTCATCTaGAATTCCAAAACATTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KGYLVTDPQVSEEQRKVWPRFLI*NSKTLD Trigger: ATCTAATGTTTTGGAATTGCAGATGAGGAAGCGAGG...CCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
||
| CDS-3UTR CCA 90 bp | GTCAGGCCTTTCCAGTTATTCCAAACAATACAAAGTGACAATATAGTTGGCTTCAAAACTGAGAGCCAGTaGTTAACCAGCCAGTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VRPFQLFQTIQSDNIVGFKTESQ*LTSQFP Trigger: GGGAAACTGGCTGGTTAACCACTGGCTCTCAGTTTT...GAAGCCAACTATATTGTCACTTTGTATTGTTTGGAATAACTGGAAAGGCCTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
||
| CDS-3UTR CCA 90 bp | TATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGTTTGGAGACTGGATaGGATTTAGCCAAGAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: YLVTDPQVSEEQRKVWKLCLETG*DLAKNL Trigger: AAGATTCTTGGCTAAATCCCATCCAGTCTCCAAACA...CAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
||
| CDS-3UTR CCA 90 bp | GAGGCAAAGGGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAACTCCAGGAAGGAAATaGAGGGGCAATTTACAAATA | + |
|
Preference number: 4 (lower is better) Translates to: EAKGYLVTDPQVSEEQRKTPGRK*RGNLQI Trigger: TATTTGTAAATTGCCCCTCCATTTCCTTCCTGGAGT...TTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACCCTTTGCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
||
| CDS-3UTR CCA 90 bp | AAGGGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGGAAAAATTCTTCCTCTaGAGCAGAAGTCAGAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KGYLVTDPQVSEEQRKVWEKFFL*SRSQSE Trigger: TTCACTCTGACTTCTGCTCCAGAGGAAGAATTTTTC...CCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
||
| CDS-3UTR CCA 90 bp | AGACACCTGATGTTAAATTGTGCAAGTGTCAGCCAGCAAAATTCAGCTAAAGGCACAGCCACTTCATACTaGAAAACATCCTCACTGACT | + |
|
Preference number: 4 (lower is better) Translates to: RHLMLNCASVSQQNSAKGTATSY*KTSSLT Trigger: AGTCAGTGAGGATGTTTTCCAGTATGAAGTGGCTGT...GCCTTTAGCTGAATTTTGCTGGCTGACACTTGCACAATTTAACATCAGGTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
||
| CDS-3UTR TCA 90 bp | GTCAGGCCTTTCCAGTTATTCCAAACAATACAAAGTGACAATATAGTTGGCTTCCCTGCTGCTCGAATATaGACGGAGAAAAATTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VRPFQLFQTIQSDNIVGFPAARI*TEKNSS Trigger: GGAAGAATTTTTCTCCGTTCATATTCGAGCAGCAGG...GAAGCCAACTATATTGTCACTTTGTATTGTTTGGAATAACTGGAAAGGCCTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
||
| CDS-3UTR GCA 90 bp | AATTGTGCAAGTGTCAGCCAGCAAAATTCAGCTAAAGGCAGGTTCCCAGGATTTAAAACATTAGATGGGTaGATGACAACCTTGGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: NCASVSQQNSAKGRFPGFKTLDG*MTTLVI Trigger: GATTACCAAGGTTGTCATGCACCCATCTAATGTTTT...AAATCCTGGGAACCTGCCTTTAGCTGAATTTTGCTGGCTGACACTTGCACAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
||
| CDS-3UTR GCA 90 bp | AAGGGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAAACATTAGATGGGTaGATGACAACCTTGGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: KGYLVTDPQVSEEQRKVWKTLDG*MTTLVI Trigger: GATTACCAAGGTTGTCATGCACCCATCTAATGTTTT...CCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
||
| CDS-3UTR GCA 90 bp | AAGGGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAATACTGGTAAATGCTaGATACATCACTGTCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: KGYLVTDPQVSEEQRKVWNTGKC*IHHCHV Trigger: AACATGACAGTGATGTATGCAGCATTTACCAGTATT...CCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
||
| CDS-3UTR CCA 90 bp | GTCAGGCCTTTCCAGTTATTCCAAACAATACAAAGTGACAATATAGTTGGCTTCCTCATTGTCCCACATTaGTCTCCCAAAGGAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VRPFQLFQTIQSDNIVGFLIVPH*SPKGSF Trigger: AAAACTTCCTTTGGGAGACCAATGTGGGACAATGAG...GAAGCCAACTATATTGTCACTTTGTATTGTTTGGAATAACTGGAAAGGCCTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
||
| CDS-3UTR GCA 90 bp | GTCAGGCCTTTCCAGTTATTCCAAACAATACAAAGTGACAATATAGTTGGCTTCTATGCAGATCATATATaGCACCAGCTTATGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VRPFQLFQTIQSDNIVGFYADHI*HQLMEG Trigger: ACCTTCCATAAGCTGGTGGCATATATGATCTGCATA...GAAGCCAACTATATTGTCACTTTGTATTGTTTGGAATAACTGGAAAGGCCTGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
||
| CDS-3UTR CCA 90 bp | ATAAAAGAGCTTCAGTTCAATTATCTCATGATGTACGTCAGGCCTTTCCAGTTATTGTTGTCGGCACGCTaGAATTTGTACCAGATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IKELQFNYLMMYVRPFQLLLSAR*NLYQID Trigger: ATCTATCTGGTACAAATTCCAGCGTGCCGACAACAA...TAACTGGAAAGGCCTGACGTACATCATGAGATAATTGAACTGAAGCTCTTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
||
| CDS-3UTR CCA 90 bp | ATAAAAGAGCTTCAGTTCAATTATCTCATGATGTACGTCAGGCCTTTCCAGTTACTGTCAGGATGTCAGTaGCTCTGTCAAAGTTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: IKELQFNYLMMYVRPFQLLSGCQ*LCQSLM Trigger: CATTAAACTTTGACAGAGCCACTGACATCCTGACAG...TAACTGGAAAGGCCTGACGTACATCATGAGATAATTGAACTGAAGCTCTTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
||
| CDS-3UTR GCA 90 bp | GTCAGGCCTTTCCAGTTATTCCAAACAATACAAAGTGACAATATAGTTGGCTTCAATACTGGTAAATGCTaGATACATCACTGTCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: VRPFQLFQTIQSDNIVGFNTGKC*IHHCHV Trigger: AACATGACAGTGATGTATGCAGCATTTACCAGTATT...GAAGCCAACTATATTGTCACTTTGTATTGTTTGGAATAACTGGAAAGGCCTGAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
||
| CDS CCA 90 bp | TTTCCCATTGTCAAATGGAGGTTTGGAGCCTCCCTAGGAGCAATCTaGATTCTCTGGAGAGGTCCTCTTGAGCCTCTGAGCTCCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FPIVKWRFGASLGAI*ILWRGPLEPLSSPA Trigger: GGCTGGGGAGCTCAGAGGCTCAAGAGGACCTCTCCAGAGAATCCAGATTGCTCCTAGGGAGGCTCCAAACCTCCATTTGACAATGGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159231.3 ENSMUST00000162833.8 |
||
| CDS-3UTR CAA 90 bp | CCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCCTCCAAGGTTTGCGCAGGCTTTTaGCCAAAGTCCGAGGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PKLVKSKGKCGSCAASSKVCAGF*PKSEGH Trigger: GTGGCCCTCGGACTTTGGCAAAAAGCCTGCGCAAAC...CTTGGAGGAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
||
| CDS CCA 90 bp | GAGCCAGTGGTTAACCAGCCAGTTTCCCATTGTCAAATGGAGGTTTaGAGCCTCCCTAGGAGCAATCTGGATTCTCTGGAGAGGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: EPVVNQPVSHCQMEV*SLPRSNLDSLERSS Trigger: AGAGGACCTCTCCAGAGAATCCAGATTGCTCCTAGGGAGGCTCCAAACCTCCATTTGACAATGGGAAACTGGCTGGTTAACCACTGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159231.3 ENSMUST00000162833.8 |
||
| CDS-3UTR CAA 90 bp | CTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCCTTTCTCAGTGTACGGTaGCAAAATGAGCAGGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LTPKLVKSKGKCGSCAASFLSVR*QNEQVP Trigger: GGGCACCTGCTCATTTTGCAACCGTACACTGAGAAA...GGAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
||
| CDS TCA 90 bp | CCTCGATCCTGGGCATTGGTGAGTGCTGTTGTTCAAATGTCCTTATaGGATTTCGTGTCCAGTCCCCTGCTGCTCGAATATGAACGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PRSWALVSAVVQMSL*DFVSSPLLLEYERR Trigger: TCTCCGTTCATATTCGAGCAGCAGGGGACTGGACACGAAATCTCATAAGGACATTTGAACAACAGCACTCACCAATGCCCAGGATCGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 ENSMUST00000159259.3 |
||
| CDS-3UTR CAA 90 bp | AAGGGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGCAAGCTCTCCTCTGTTaGACCCCGGACAATCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: KGYLVTDPQVSEEQRKVWQALLC*TPDNPT Trigger: GGTGGGATTGTCCGGGGTCAAACAGAGGAGAGCTTG...CCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
||
| CDS CCA 90 bp | GGATGGGATTTAGCCAAGAATCTTCTTTCTCAGGATGAGATAGGCTaGAGAGAACAGAAGCGAGAGATCCATCCATGGCCTGTTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GWDLAKNLLSQDEIG*REQKREIHPWPVGF Trigger: GAAGCCAACAGGCCATGGATGGATCTCTCGCTTCTGTTCTCTCCAGCCTATCTCATCCTGAGAAAGAAGATTCTTGGCTAAATCCCATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 ENSMUST00000159259.3 |
||
| CDS-3UTR CAA 90 bp | AATTGTGCAAGTGTCAGCCAGCAAAATTCAGCTAAAGGCAGGTTCCCAGGATTTTCCATCCATGGCCTGTaGGCTTCTTCTGTAGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: NCASVSQQNSAKGRFPGFSIHGL*ASSVAF Trigger: GAACGCTACAGAAGAAGCCAACAGGCCATGGATGGA...AAATCCTGGGAACCTGCCTTTAGCTGAATTTTGCTGGCTGACACTTGCACAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
||
| CDS-3UTR CAA 90 bp | GAGGCAAAGGGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAATCCATCCATGGCCTGTaGGCTTCTTCTGTAGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: EAKGYLVTDPQVSEEQRKSIHGL*ASSVAF Trigger: GAACGCTACAGAAGAAGCCAACAGGCCATGGATGGA...TTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACCCTTTGCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
||
| CDS-3UTR CAA 90 bp | ACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCCTCCGAATTCAATAAGTTGTaGAACCAGGCAAAGGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: TPKLVKSKGKCGSCAASSEFNKL*NQAKAP Trigger: AGGTGCCTTTGCCTGGTTCAACAACTTATTGAATTC...GGAGGAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
||
| CDS-3UTR CAA 90 bp | GTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCACTCATTGTCCCACATaGGTCTCCCAAAGGAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VTDPQVSEEQRKVWKLCCTHCPT*VSQRKF Trigger: AAACTTCCTTTGGGAGACCAATGTGGGACAATGAGT...GCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
||
| CDS-3UTR CAA 90 bp | CCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCCTCCAAGACTCATTGTCCCACATaGGTCTCCCAAAGGAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PKLVKSKGKCGSCAASSKTHCPT*VSQRKF Trigger: AAACTTCCTTTGGGAGACCAATGTGGGACAATGAGT...CTTGGAGGAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
||
| CDS-3UTR CAA 90 bp | TATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGCCAGCCTTTTGTGTTTaGAGCTTGTTGTCGGCACGC | + |
|
Preference number: 5 (lower is better) Translates to: YLVTDPQVSEEQRKVWKLPAFCV*SLLSAR Trigger: GCGTGCCGACAACAAGCTCAAAACACAAAAGGCTGG...CAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113275.10 |
||
| CDS-3UTR CAA 90 bp | AATTGTGCAAGTGTCAGCCAGCAAAATTCAGCTAAAGGCAGGTTCCCAGGATTTTTTCTCAGTGTACGGTaGCAAAATGAGCAGGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: NCASVSQQNSAKGRFPGFFLSVR*QNEQVP Trigger: GGGCACCTGCTCATTTTGCAACCGTACACTGAGAAA...AAATCCTGGGAACCTGCCTTTAGCTGAATTTTGCTGGCTGACACTTGCACAATT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
||
| CDS-3UTR CAA 90 bp | ACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCTGCTTCATTCTAGAAAACTCATaGTCCCACATTGGTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TDPQVSEEQRKVWKLCCFILENS*SHIGLP Trigger: TGGGAGACCAATGTGGGACAATGAGTTTTCTAGAAT...GAAGCAGCACAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 |
||
| CDS-3UTR CAA 90 bp | GTCAGGCCTTTCCAGTTATTCCAAACAATACAAAGTGACAATATAGTTGGCTTCGTTTGCGCAGGCTTTTaGCCAAAGTCCGAGGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VRPFQLFQTIQSDNIVGFVCAGF*PKSEGH Trigger: GTGGCCCTCGGACTTTGGCAAAAAGCCTGCGCAAAC...GAAGCCAACTATATTGTCACTTTGTATTGTTTGGAATAACTGGAAAGGCCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
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| CDS GCA 90 bp | GTGCTGTTGTTCAAATGTCCTTATGAGATTTCGTGTCCAGTCCCCTaGTGCTCGAATATGAACGGAGAAAAATTCTTCCTCTGGAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: VLLFKCPYEISCPVP*CSNMNGEKFFLWSR Trigger: TCTGCTCCAGAGGAAGAATTTTTCTCCGTTCATATTCGAGCAGCAGGGGACTGGACACGAAATCTCATAAGGACATTTGAACAACAGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 ENSMUST00000159259.3 |
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| CDS CCA 90 bp | GTCTCCCAAAGGAAGTTTTCTGCTTCAGACCTGTCAGGATGTCAGTaGCTCTGTCAAAGTTTAATGCTGCATGACCAGCAATGTTGCTAT | + |
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Preference number: 5 (lower is better) Translates to: VSQRKFSASDLSGCQ*LCQSLMLHDQQCCY Trigger: ATAGCAACATTGCTGGTCATGCAGCATTAAACTTTGACAGAGCCACTGACATCCTGACAGGTCTGAAGCAGAAAACTTCCTTTGGGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000159259.3 |
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| CDS CCA 90 bp | GTCTCCCAAAGGAAGTTTTCTGCTTCAGACCTGTCAGGATGTCAGTaGCTCTGTCAAAGTTTAATGCTGCATGACCAGCCTTTTGTGTTT | + |
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Preference number: 5 (lower is better) Translates to: VSQRKFSASDLSGCQ*LCQSLMLHDQPFVF Trigger: AAACACAAAAGGCTGGTCATGCAGCATTAAACTTTGACAGAGCCACTGACATCCTGACAGGTCTGAAGCAGAAAACTTCCTTTGGGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113275.10 |
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| CDS GCA 90 bp | CTGTTGTTCAAATGTCCTTATGAGATTTCGTGTCCAGTCCCCTGCTaGTCGAATATGAACGGAGAAAAATTCTTCCTCTGGAGCAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: LLFKCPYEISCPVPC*SNMNGEKFFLWSRS Trigger: ACTTCTGCTCCAGAGGAAGAATTTTTCTCCGTTCATATTCGAGCAGCAGGGGACTGGACACGAAATCTCATAAGGACATTTGAACAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 ENSMUST00000159259.3 |
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| CDS-3UTR CAA 90 bp | TATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGCTGTGCATGACCAGCCTTTaGTGTTTTGAGCTTGTTGTC | + |
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Preference number: 5 (lower is better) Translates to: YLVTDPQVSEEQRKVWKLCMTSL*CFELVV Trigger: GACAACAAGCTCAAAACACAAAAGGCTGGTCATGCA...CAGCTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113275.10 |
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| CDS TCA 90 bp | TGCCTAATTCCTCCATCTCTTGTTCCAGGGAATTCAATAAGTTGTTaGACCAGGCAAAGGCACCTGTCTCTCTACAGATCCAGTAGAAAT | + |
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Preference number: 5 (lower is better) Translates to: CLIPPSLVPGNSISC*TRQRHLSLYRSSRN Trigger: ATTTCTACTGGATCTGTAGAGAGACAGGTGCCTTTGCCTGGTTCAACAACTTATTGAATTCCCTGGAACAAGAGATGGAGGAATTAGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000159259.3 |
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| CDS GCA 90 bp | CTAGAAAACTCATTGTCCCACATTGGTCTCCCAAAGGAAGTTTTCTaGTTCAGACCTGTCAGGATGTCAGTGGCTCTGTCAAAGTTTAAT | + |
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Preference number: 5 (lower is better) Translates to: LENSLSHIGLPKEVF*FRPVRMSVALSKFN Trigger: ATTAAACTTTGACAGAGCCACTGACATCCTGACAGGTCTGAAGCAGAAAACTTCCTTTGGGAGACCAATGTGGGACAATGAGTTTTCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 ENSMUST00000159259.3 |
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| CDS-3UTR CAA 90 bp | GGTTATCTAGTAACTGACCCCCAAGTTAGTGAAGAGCAAAGGAAAGTGTGGAAGAGGGAATTCAATAAGTaGTTGAACCAGGCAAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: GYLVTDPQVSEEQRKVWKREFNK*LNQAKA Trigger: TGCCTTTGCCTGGTTCAACAACTTATTGAATTCCCT...CTTCCACACTTTCCTTTGCTCTTCACTAACTTGGGGGTCAGTTACTAGATAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
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| CDS-3UTR CAA 90 bp | AATTGTGCAAGTGTCAGCCAGCAAAATTCAGCTAAAGGCAGGTTCCCAGGATTTATTCTAGAAAACTCATaGTCCCACATTGGTCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: NCASVSQQNSAKGRFPGFILENS*SHIGLP Trigger: TGGGAGACCAATGTGGGACAATGAGTTTTCTAGAAT...AAATCCTGGGAACCTGCCTTTAGCTGAATTTTGCTGGCTGACACTTGCACAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033610.13 |
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| CDS TCA 90 bp | ATACCAAAAGAGCTCAAAATAATTCCTGCGGATAAACTCCATAGCTaGCGTTACCATGAGAACCAAAGCTACAGTGGCAATCACTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: IPKELKIIPADKLHS*RYHENQSYSGNHSS Trigger: ACTGGAGTGATTGCCACTGTAGCTTTGGTTCTCATGGTAACGTCAGCTATGGAGTTTATCCGCAGGAATTATTTTGAGCTCTTTTGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 ENSMUST00000159259.3 |
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| CDS CCA 72 bp | AGGTTTGGAGCCTCCCTAGGAGCAATCTGGATTCTCTaGAGAGGTCCTCTTGAGCCTCTGAGCTCCCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RFGASLGAIWIL*RGPLEPLSSPA Trigger: GGCTGGGGAGCTCAGAGGCTCAAGAGGACCTCTCCAGAGAATCCAGATTGCTCCTAGGGAGGCTCCAAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159231.3 ENSMUST00000162833.8 |
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| CDS CCA 72 bp | GTCAAATGGAGGTTTGGAGCCTCCCTAGGAGCAATCTaGATTCTCTGGAGAGGTCCTCTTGAGCCTCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: VKWRFGASLGAI*ILWRGPLEPLS Trigger: GCTCAGAGGCTCAAGAGGACCTCTCCAGAGAATCCAGATTGCTCCTAGGGAGGCTCCAAACCTCCATTTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159231.3 ENSMUST00000162833.8 |
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| CDS GCA 72 bp | AAGGGACCGTCCACCTCGATCCTGGGCATTGGTGAGTaGTGTTGTTCAAATGTCCTTATGAGATTTCGTGTC | + |
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Preference number: 6 (lower is better) Translates to: KGPSTSILGIGE*CCSNVLMRFRV Trigger: GACACGAAATCTCATAAGGACATTTGAACAACAGCACTCACCAATGCCCAGGATCGAGGTGGACGGTCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 ENSMUST00000159259.3 |
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| CDS CCA 72 bp | GTTAACCAGCCAGTTTCCCATTGTCAAATGGAGGTTTaGAGCCTCCCTAGGAGCAATCTGGATTCTCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: VNQPVSHCQMEV*SLPRSNLDSLE Trigger: CTCCAGAGAATCCAGATTGCTCCTAGGGAGGCTCCAAACCTCCATTTGACAATGGGAAACTGGCTGGTTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159231.3 ENSMUST00000162833.8 |
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| CDS TCA 72 bp | TGGGCATTGGTGAGTGCTGTTGTTCAAATGTCCTTATaGGATTTCGTGTCCAGTCCCCTGCTGCTCGAATAT | + |
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Preference number: 6 (lower is better) Translates to: WALVSAVVQMSL*DFVSSPLLLEY Trigger: ATATTCGAGCAGCAGGGGACTGGACACGAAATCTCATAAGGACATTTGAACAACAGCACTCACCAATGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 ENSMUST00000159259.3 |
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| CDS CCA 72 bp | GCCTCGCTTCCTCATCTGCAATTCCAAAACATTAGATaGGTGCATGACAACCTTGGTAATCACGACCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: ASLPHLQFQNIR*VHDNLGNHDLL Trigger: CAGAAGGTCGTGATTACCAAGGTTGTCATGCACCCATCTAATGTTTTGGAATTGCAGATGAGGAAGCGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 ENSMUST00000159259.3 |
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| CDS CCA 72 bp | AGGAAGTTTTCTGCTTCAGACCTGTCAGGATGTCAGTaGCTCTGTCAAAGTTTAATGCTGCATGACCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: RKFSASDLSGCQ*LCQSLMLHDQP Trigger: AGGCTGGTCATGCAGCATTAAACTTTGACAGAGCCACTGACATCCTGACAGGTCTGAAGCAGAAAACTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113275.10 |
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| CDS GCA 72 bp | AATCACTCCAGTAAGGCCAGCAATACTGGTAAATGCTaGATACATCACTGTCATGTTTGGAGACTGGATGGG | + |
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Preference number: 6 (lower is better) Translates to: NHSSKASNTGKC*IHHCHVWRLDG Trigger: CCCATCCAGTCTCCAAACATGACAGTGATGTATGCAGCATTTACCAGTATTGCTGGCCTTACTGGAGTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 ENSMUST00000159259.3 |
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| CDS GCA 72 bp | TGTCCTACTTCCATGCTAAAGCCTCGCTTCCTCATCTaGAATTCCAAAACATTAGATGGGTGCATGACAACC | + |
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Preference number: 6 (lower is better) Translates to: CPTSMLKPRFLI*NSKTLDGCMTT Trigger: GGTTGTCATGCACCCATCTAATGTTTTGGAATTGCAGATGAGGAAGCGAGGCTTTAGCATGGAAGTAGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 ENSMUST00000159259.3 |
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| CDS CCA 72 bp | AGGAAGTTTTCTGCTTCAGACCTGTCAGGATGTCAGTaGCTCTGTCAAAGTTTAATGCTGCATGACCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: RKFSASDLSGCQ*LCQSLMLHDQQ Trigger: TTGCTGGTCATGCAGCATTAAACTTTGACAGAGCCACTGACATCCTGACAGGTCTGAAGCAGAAAACTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000159259.3 |
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| CDS CAA 72 bp | TCCTCCATCTCTTGTTCCAGGGAATTCAATAAGTTGTaGAACCAGGCAAAGGCACCTGTCTCTCTACAGATC | + |
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Preference number: 6 (lower is better) Translates to: SSISCSREFNKL*NQAKAPVSLQI Trigger: GATCTGTAGAGAGACAGGTGCCTTTGCCTGGTTCAACAACTTATTGAATTCCCTGGAACAAGAGATGGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000159259.3 |
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| CDS GCA 72 bp | AAATGTCCTTATGAGATTTCGTGTCCAGTCCCCTGCTaGTCGAATATGAACGGAGAAAAATTCTTCCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: KCPYEISCPVPC*SNMNGEKFFLW Trigger: CCAGAGGAAGAATTTTTCTCCGTTCATATTCGAGCAGCAGGGGACTGGACACGAAATCTCATAAGGACATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 ENSMUST00000159259.3 |
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| CDS CCA 72 bp | CCAGCCTTTTGTGTTTTGAGCTTGTTGTCGGCACGCTaGAATTTGTACCAGATAGATTTCAAGATGGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: PAFCVLSLLSAR*NLYQIDFKMEA Trigger: TGCTTCCATCTTGAAATCTATCTGGTACAAATTCCAGCGTGCCGACAACAAGCTCAAAACACAAAAGGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113275.10 |
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| CDS CAA 72 bp | AATTCCTCCATCTCTTGTTCCAGGGAATTCAATAAGTaGTTGAACCAGGCAAAGGCACCTGTCTCTCTACAG | + |
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Preference number: 6 (lower is better) Translates to: NSSISCSREFNK*LNQAKAPVSLQ Trigger: CTGTAGAGAGACAGGTGCCTTTGCCTGGTTCAACAACTTATTGAATTCCCTGGAACAAGAGATGGAGGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033610.13 ENSMUST00000159259.3 |
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| CDS TCA 72 bp | GAGCTCAAAATAATTCCTGCGGATAAACTCCATAGCTaGCGTTACCATGAGAACCAAAGCTACAGTGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: ELKIIPADKLHS*RYHENQSYSGN Trigger: ATTGCCACTGTAGCTTTGGTTCTCATGGTAACGTCAGCTATGGAGTTTATCCGCAGGAATTATTTTGAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 ENSMUST00000159259.3 |
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| CDS GCA 72 bp | TTCAAATGTCCTTATGAGATTTCGTGTCCAGTCCCCTaGTGCTCGAATATGAACGGAGAAAAATTCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: FKCPYEISCPVP*CSNMNGEKFFL Trigger: GAGGAAGAATTTTTCTCCGTTCATATTCGAGCAGCAGGGGACTGGACACGAAATCTCATAAGGACATTTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033610.13 ENSMUST00000113275.10 ENSMUST00000159259.3 |
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