Pregenerated sensors for NOTUM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042988Ensembl transcript IDs: ENSMUST00000106177.8, ENSMUST00000106178.9, ENSMUST00000150458.2
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCAGGCAGTGGGAGAGAATAGGCAGTCAGACATCCACAGCCAGGTaGGCCCTGGGAGAGGAAGAAGTACCTAGAAGTCGAGGTGAGTCA | + |
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Preference number: 1 (lower is better) Translates to: ARQWERIGSQTSTAR*ALGEEEVPRSRGES Trigger: TGACTCACCTCGACTTCTAGGTACTTCTTCCTCTCCCAGGGCCCACCTGGCTGTGGATGTCTGACTGCCTATTCTCTCCCACTGCCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| 3UTR GCA 90 bp | AATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTaGGCTGACTGGCTCAGGGGTCCAGTGCACGCTTTGCTTCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: NNTNEHDQWGLGGTV*ADWLRGPVHALLLA Trigger: AGCCAGAAGCAAAGCGTGCACTGGACCCCTGAGCCAGTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| 3UTR-3UTR TCA 90 bp | CTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGTGTCACCCTGGGGCAGTaGGTGGGCCAGCCCCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: LDSGQTTPLARQWERIGSVTLGQ*VGQPLS Trigger: ACTGAGGGGCTGGCCCACTCACTGCCCCAGGGTGAC...ACTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGCGAGGTGAGTCACCCTaGGGCAGTGAGTGGGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: PGLRADHSSSQAVGENRQRGESP*GSEWAS Trigger: GCTGGCCCACTCACTGCCCCAGGGTGACTCACCTCG...CTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| 3UTR-3UTR TCA 90 bp | ATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACTGTCACCCTGGGGCAGTaGGTGGGCCAGCCCCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: IIQTNMISGGWEGLSALTVTLGQ*VGQPLS Trigger: ACTGAGGGGCTGGCCCACTCACTGCCCCAGGGTGAC...AGTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| 3UTR-3UTR CCA 90 bp | AATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACCCCTGGGGCAGTGAGTaGGCCAGCCCCTCAGTACCA | + |
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Preference number: 2 (lower is better) Translates to: NNTNEHDQWGLGGTVCADPWGSE*ASPSVP Trigger: TGGTACTGAGGGGCTGGCCCACTCACTGCCCCAGGG...GTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| 3UTR-3UTR CCA 90 bp | ATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACTCCCTGGGGCAGTGAGTaGGCCAGCCCCTCAGTACCA | + |
|
Preference number: 2 (lower is better) Translates to: IIQTNMISGGWEGLSALTPWGSE*ASPSVP Trigger: TGGTACTGAGGGGCTGGCCCACTCACTGCCCCAGGG...AGTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| 3UTR-3UTR CCA 90 bp | AATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACACATCCACAGCCAGGTaGGCCCTGGGAGAGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: NNTNEHDQWGLGGTVCADTSTAR*ALGEEE Trigger: TTCTTCCTCTCCCAGGGCCCACCTGGCTGTGGATGT...GTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| 3UTR-3UTR GCA 90 bp | TATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGGTCCAGTGCACGCTTTaGTTCTGGCTCCCTCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: YKIIQTNMISGGWEGLSAVQCTL*FWLPPQ Trigger: TTGGGGAGGGAGCCAGAAGCAAAGCGTGCACTGGAC...CGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| 3UTR-3UTR CCA 90 bp | TCACTTTATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTGCACGCTTTGCTTCTaGCTCCCTCCCCAAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: SLYKIIQTNMISGGWEGLCTLCF*LPPQAG Trigger: CCCAGCTTGGGGAGGGAGCCAGAAGCAAAGCGTGCA...CAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATAAAGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| 3UTR-3UTR GCA 90 bp | TCACTTTATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGGTCCAGTGCACGCTTTaGTTCTGGCTCCCTCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: SLYKIIQTNMISGGWEGLVQCTL*FWLPPQ Trigger: TTGGGGAGGGAGCCAGAAGCAAAGCGTGCACTGGAC...CAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATAAAGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| 3UTR-3UTR CAA 90 bp | TCACTTTATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGGGTCCAGTGCACGCTTaGCTTCTGGCTCCCTCCCCA | + |
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Preference number: 3 (lower is better) Translates to: SLYKIIQTNMISGGWEGLGPVHA*LLAPSP Trigger: TGGGGAGGGAGCCAGAAGCAAAGCGTGCACTGGACC...CAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATAAAGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR CCA 90 bp | AGGAAGAAGTACCTAGAAGTCGAGGTGAGTCACCCTGGGGCAGTGAGTGGGCCAGGCTGGGGTGGCTGCTaGCCACGGCGCCTCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: RKKYLEVEVSHPGAVSGPGWGGC*PRRLQV Trigger: GACCTGGAGGCGCCGTGGCCAGCAGCCACCCCAGCC...TGGCCCACTCACTGCCCCAGGGTGACTCACCTCGACTTCTAGGTACTTCTTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR TCA 90 bp | CCTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGGGCGCAGGTCCTCATTaGGCTGCTGCGCAGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PGLRADHSSSQAVGENRQGAGPH*AAAQSR Trigger: CCTGCTCTGCGCAGCAGCTCAATGAGGACCTGCGCC...CTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR TCA 90 bp | GAGGAAGAAGTACCTAGAAGTCGAGGTGAGTCACCCTGGGGCAGTGAGTGGGCCGTCCAGGAACCAGCCTaGGTCAGCCAGGCCCCGCAC | + |
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Preference number: 4 (lower is better) Translates to: EEEVPRSRGESPWGSEWAVQEPA*VSQAPH Trigger: GTGCGGGGCCTGGCTGACTCAGGCTGGTTCCTGGAC...GGCCCACTCACTGCCCCAGGGTGACTCACCTCGACTTCTAGGTACTTCTTCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR GCA 90 bp | CCTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGAGTAGCCGGCGGGGCTaGCGTCATTGCAGGTCACCG | + |
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Preference number: 4 (lower is better) Translates to: PGLRADHSSSQAVGENRQSSRRG*RHCRSP Trigger: CGGTGACCTGCAATGACGGCAGCCCCGCCGGCTACT...CTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR TCA 90 bp | CCTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGTGCCCTCCACTGCCGTaGAGTCCAGCGGGAAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: PGLRADHSSSQAVGENRQCPPLP*SPAGSS Trigger: AGAGCTTCCCGCTGGACTTCACGGCAGTGGAGGGCA...CTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR TCA 90 bp | CTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGTCCGGATGGTAGGGCATaGGGGATTGCAGTGGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LDSGQTTPLARQWERIGSPDGRA*GIAVGP Trigger: TGGCCCCACTGCAATCCCTCATGCCCTACCATCCGG...ACTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR CCA 90 bp | CCTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGTCCCTAGCAGCTTGCTaGGCTCCATCCCCTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: PGLRADHSSSQAVGENRQSLAAC*APSPAA Trigger: AGCAGCAGGGGATGGAGCCCAGCAAGCTGCTAGGGA...CTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR GCA 90 bp | CTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGTCAACAGCAGCACCTTTaGCCCGCTCAGCCCTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LDSGQTTPLARQWERIGSQQQHL*PAQPFA Trigger: GGCAAAGGGCTGAGCGGGGCAAAGGTGCTGCTGTTG...ACTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR CCA 90 bp | CTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGTAGCAGTGCAGTGCCCTaGGCAGTGAGGTCCCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LDSGQTTPLARQWERIGSSSAVP*AVRSPS Trigger: TGAAGGGGACCTCACTGCCCAGGGCACTGCACTGCT...ACTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR CCA 90 bp | CTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGTCATGAGGGATTGCAGTaGGGCCAGGGGCAGCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: LDSGQTTPLARQWERIGSHEGLQ*GQGQLS Trigger: AGACAGCTGCCCCTGGCCCCACTGCAATCCCTCATG...ACTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR TCA 90 bp | GAGGAAGAAGTACCTAGAAGTCGAGGTGAGTCACCCTGGGGCAGTGAGTGGGCCGTGTTCAGCAGGAGGTaGAGGCGCAGGTCCTCATTG | + |
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Preference number: 4 (lower is better) Translates to: EEEVPRSRGESPWGSEWAVFSRR*RRRSSL Trigger: CAATGAGGACCTGCGCCTTCACCTCCTGCTGAACAC...GGCCCACTCACTGCCCCAGGGTGACTCACCTCGACTTCTAGGTACTTCTTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR TCA 90 bp | CTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGTCGTATGATGATCTCATaGGACAGGCAGGCGGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LDSGQTTPLARQWERIGSRMMIS*DRQAGA Trigger: TGCCCCCGCCTGCCTGTCTCATGAGATCATCATACG...ACTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR GCA 90 bp | AGGAAGAAGTACCTAGAAGTCGAGGTGAGTCACCCTGGGGCAGTGAGTGGGCCATCTTCCTGCCCTCGCTaGCCCCAACCCAATGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: RKKYLEVEVSHPGAVSGPSSCPR*PQPNAA Trigger: TGCTGCATTGGGTTGGGGGCAGCGAGGGCAGGAAGA...TGGCCCACTCACTGCCCCAGGGTGACTCACCTCGACTTCTAGGTACTTCTTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR GCA 90 bp | CTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGTGGGATACAGGGACTGTaGCAGGCTCTTGACTTGCGC | + |
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Preference number: 4 (lower is better) Translates to: LDSGQTTPLARQWERIGSGIQGL*QALDLR Trigger: GCGCAAGTCAAGAGCCTGGCACAGTCCCTGTATCCC...ACTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR GCA 90 bp | AGGAAGAAGTACCTAGAAGTCGAGGTGAGTCACCCTGGGGCAGTGAGTGGGCCACGGGGCTGCCGTCATTaGAGGTCACCGACGTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: RKKYLEVEVSHPGAVSGPRGCRH*RSPTCS Trigger: TGAACACGTCGGTGACCTGCAATGACGGCAGCCCCG...TGGCCCACTCACTGCCCCAGGGTGACTCACCTCGACTTCTAGGTACTTCTTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR GCA 90 bp | CTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGTGCCACGTTCATCTCTTaGCCTGTGAACTGGTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: LDSGQTTPLARQWERIGSATFIS*PVNWSR Trigger: CCGGGACCAGTTCACAGGGCAAGAGATGAACGTGGC...ACTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR CCA 90 bp | CCTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGCAGCTGTCTACCAGGTaGAAAGGGCAGCCCTTCATG | + |
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Preference number: 4 (lower is better) Translates to: PGLRADHSSSQAVGENRQQLSTR*KGQPFM Trigger: CATGAAGGGCTGCCCTTTCCACCTGGTAGACAGCTG...CTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR TCA 90 bp | AGGAAGAAGTACCTAGAAGTCGAGGTGAGTCACCCTGGGGCAGTGAGTGGGCCAAGTCTTTGGAGCTCATaGGGCGCCGCATGGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: RKKYLEVEVSHPGAVSGPSLWSS*GAAWCC Trigger: ACAGCACCATGCGGCGCCTCATGAGCTCCAAAGACT...TGGCCCACTCACTGCCCCAGGGTGACTCACCTCGACTTCTAGGTACTTCTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR TCA 90 bp | AGGAAGAAGTACCTAGAAGTCGAGGTGAGTCACCCTGGGGCAGTGAGTGGGCCACGTATGATGATCTCATaGGACAGGCAGGCGGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: RKKYLEVEVSHPGAVSGPRMMIS*DRQAGA Trigger: TGCCCCCGCCTGCCTGTCTCATGAGATCATCATACG...TGGCCCACTCACTGCCCCAGGGTGACTCACCTCGACTTCTAGGTACTTCTTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR GCA 90 bp | CTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGTTCCTCATTGAGCTGCTaGGCAGAGCAGGGATACAGG | + |
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Preference number: 4 (lower is better) Translates to: LDSGQTTPLARQWERIGSSSLSC*AEQGYR Trigger: CCTGTATCCCTGCTCTGCGCAGCAGCTCAATGAGGA...ACTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR GCA 90 bp | CTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGTAGGTCCTCATTGAGCTaGTGCGCAGAGCAGGGATAC | + |
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Preference number: 4 (lower is better) Translates to: LDSGQTTPLARQWERIGSRSSLS*CAEQGY Trigger: GTATCCCTGCTCTGCGCAGCAGCTCAATGAGGACCT...ACTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR GCA 90 bp | ATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACTCCCCGCTCAGCCCTTTaGCCAGGAGCTCCCGTACCA | + |
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Preference number: 4 (lower is better) Translates to: IIQTNMISGGWEGLSALTPRSAL*PGAPVP Trigger: TGGTACGGGAGCTCCTGGGCAAAGGGCTGAGCGGGG...AGTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR GCA 90 bp | CCTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGTCTGATCGCCGGTACTaGTTGTTGTCCAGGAACCAG | + |
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Preference number: 4 (lower is better) Translates to: PGLRADHSSSQAVGENRQSDRRY*LLSRNQ Trigger: CTGGTTCCTGGACAACAAGCAGTACCGGCGATCAGA...CTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR GCA 90 bp | AGGAAGAAGTACCTAGAAGTCGAGGTGAGTCACCCTGGGGCAGTGAGTGGGCCAGCCACGTTCATCTCTTaGCCTGTGAACTGGTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: RKKYLEVEVSHPGAVSGPATFIS*PVNWSR Trigger: CCGGGACCAGTTCACAGGGCAAGAGATGAACGTGGC...TGGCCCACTCACTGCCCCAGGGTGACTCACCTCGACTTCTAGGTACTTCTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR CCA 90 bp | CCTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGACCGCCGACTGCCCTTaGACTCCTTCAAATAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: PGLRADHSSSQAVGENRQTADCP*TPSNSS Trigger: GCTACTATTTGAAGGAGTCCAAGGGCAGTCGGCGGT...CTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR TCA 90 bp | AATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACTGCCCTCCACTGCCGTaGAGTCCAGCGGGAAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: NNTNEHDQWGLGGTVCADCPPLP*SPAGSS Trigger: AGAGCTTCCCGCTGGACTTCACGGCAGTGGAGGGCA...GTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR TCA 90 bp | AGGAAGAAGTACCTAGAAGTCGAGGTGAGTCACCCTGGGGCAGTGAGTGGGCCACACAGTTCTCCCGGTTaGAGCAATACCAGCCGCCTT | + |
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Preference number: 4 (lower is better) Translates to: RKKYLEVEVSHPGAVSGPHSSPG*SNTSRL Trigger: AAGGCGGCTGGTATTGCTTCAACCGGGAGAACTGTG...TGGCCCACTCACTGCCCCAGGGTGACTCACCTCGACTTCTAGGTACTTCTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR TCA 90 bp | AATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACCCGGATGGTAGGGCATaGGGGATTGCAGTGGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: NNTNEHDQWGLGGTVCADPDGRA*GIAVGP Trigger: TGGCCCCACTGCAATCCCTCATGCCCTACCATCCGG...GTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR GCA 90 bp | ATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACTCTGCCCCCAACCCAATaGAGCAGGCCCAGCAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: IIQTNMISGGWEGLSALTLPPTQ*SRPSSS Trigger: GCTACTGCTGGGCCTGCTGCATTGGGTTGGGGGCAG...AGTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR GCA 90 bp | CTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGTGCCAGGCTCTTGACTTaGGCCATAAAGCTGTCCATG | + |
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Preference number: 4 (lower is better) Translates to: LDSGQTTPLARQWERIGSARLLT*AIKLSM Trigger: CATGGACAGCTTTATGGCGCAAGTCAAGAGCCTGGC...ACTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR CCA 90 bp | GAGGAAGAAGTACCTAGAAGTCGAGGTGAGTCACCCTGGGGCAGTGAGTGGGCCACCGCCGACTGCCCTTaGACTCCTTCAAATAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: EEEVPRSRGESPWGSEWATADCP*TPSNSS Trigger: GCTACTATTTGAAGGAGTCCAAGGGCAGTCGGCGGT...GGCCCACTCACTGCCCCAGGGTGACTCACCTCGACTTCTAGGTACTTCTTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR CCA 90 bp | CCTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGGGGTTCTCCTCTGGCTaGGAGGATAGAATACCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PGLRADHSSSQAVGENRQGFSSG*EDRIPV Trigger: TACTGGTATTCTATCCTCCCAGCCAGAGGAGAACCC...CTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CCA 90 bp | CTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGTTCTCGGCCCAGATTCTaGATGTATAGCCACTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LDSGQTTPLARQWERIGSSRPRF*MYSHWP Trigger: AGGCCAGTGGCTATACATCCAGAATCTGGGCCGAGA...ACTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CCA 90 bp | CTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGTGTTTTGCTGGCCTTATaGCTGTCATGGAAGCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LDSGQTTPLARQWERIGSVLLAL*LSWKLR Trigger: CCGGAGCTTCCATGACAGCCATAAGGCCAGCAAAAC...ACTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CCA 90 bp | CCTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGTCATGGGGGTTTTGCTaGCCTTATGGCTGTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGLRADHSSSQAVGENRQSWGFC*PYGCHG Trigger: TCCATGACAGCCATAAGGCCAGCAAAACCCCCATGA...CTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR GCA 90 bp | AATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACTCTTCCTGCCCTCGCTaGCCCCAACCCAATGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NNTNEHDQWGLGGTVCADSSCPR*PQPNAA Trigger: TGCTGCATTGGGTTGGGGGCAGCGAGGGCAGGAAGA...GTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR GCA 90 bp | AGGAAGAAGTACCTAGAAGTCGAGGTGAGTCACCCTGGGGCAGTGAGTGGGCCAGCCAGGCTCTTGACTTaGGCCATAAAGCTGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RKKYLEVEVSHPGAVSGPARLLT*AIKLSM Trigger: CATGGACAGCTTTATGGCGCAAGTCAAGAGCCTGGC...TGGCCCACTCACTGCCCCAGGGTGACTCACCTCGACTTCTAGGTACTTCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR GCA 90 bp | AGGAAGAAGTACCTAGAAGTCGAGGTGAGTCACCCTGGGGCAGTGAGTGGGCCAGTAACCACCGCCGACTaGCCTTGGACTCCTTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RKKYLEVEVSHPGAVSGPVTTAD*PWTPSN Trigger: ATTTGAAGGAGTCCAAGGGCAGTCGGCGGTGGTTAC...TGGCCCACTCACTGCCCCAGGGTGACTCACCTCGACTTCTAGGTACTTCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR GCA 90 bp | CTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGTGAATACCAGTACCTGTaGGTGTGTGTGGCCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LDSGQTTPLARQWERIGSEYQYL*VCVASL Trigger: AAGACTGGCCACACACACGCACAGGTACTGGTATTC...ACTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGATGCATAAGGAACTGTaGCACGTTCATCTCTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGLRADHSSSQAVGENRQMHKEL*HVHLLP Trigger: GGGCAAGAGATGAACGTGGCACAGTTCCTTATGCAT...CTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CCA 90 bp | TCACTTTATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGGGCTGGGGTGGCTGCTaGCCACGGCGCCTCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLYKIIQTNMISGGWEGLGWGGC*PRRLQV Trigger: GACCTGGAGGCGCCGTGGCCAGCAGCCACCCCAGCC...CAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATAAAGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CCA 90 bp | AGGAAGAAGTACCTAGAAGTCGAGGTGAGTCACCCTGGGGCAGTGAGTGGGCCAACCTGTGCGTGTGTGTaGCCAGTCTTTGGAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RKKYLEVEVSHPGAVSGPTCACV*PVFGAH Trigger: ATGAGCTCCAAAGACTGGCCACACACACGCACAGGT...TGGCCCACTCACTGCCCCAGGGTGACTCACCTCGACTTCTAGGTACTTCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CCA 90 bp | ATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACTAGCAGTGCAGTGCCCTaGGCAGTGAGGTCCCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IIQTNMISGGWEGLSALTSSAVP*AVRSPS Trigger: TGAAGGGGACCTCACTGCCCAGGGCACTGCACTGCT...AGTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CCA 90 bp | CTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGTTCATGGGGGTTTTGCTaGCCTTATGGCTGTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LDSGQTTPLARQWERIGSSWGFC*PYGCHG Trigger: TCCATGACAGCCATAAGGCCAGCAAAACCCCCATGA...ACTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CCA 90 bp | ATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACTTCCCTAGCAGCTTGCTaGGCTCCATCCCCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IIQTNMISGGWEGLSALTSLAAC*APSPAA Trigger: AGCAGCAGGGGATGGAGCCCAGCAAGCTGCTAGGGA...AGTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR TCA 90 bp | ATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACTAGTCTTTGGAGCTCATaGGGCGCCGCATGGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IIQTNMISGGWEGLSALTSLWSS*GAAWCC Trigger: ACAGCACCATGCGGCGCCTCATGAGCTCCAAAGACT...AGTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR GCA 90 bp | ATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACTGGGATACAGGGACTGTaGCAGGCTCTTGACTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: IIQTNMISGGWEGLSALTGIQGL*QALDLR Trigger: GCGCAAGTCAAGAGCCTGGCACAGTCCCTGTATCCC...AGTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR GCA 90 bp | TATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGAGTAGCCGGCGGGGCTaGCGTCATTGCAGGTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: YKIIQTNMISGGWEGLSASSRRG*RHCRSP Trigger: CGGTGACCTGCAATGACGGCAGCCCCGCCGGCTACT...CGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR GCA 90 bp | TATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCCCCGCTCAGCCCTTTaGCCAGGAGCTCCCGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: YKIIQTNMISGGWEGLSAPRSAL*PGAPVP Trigger: TGGTACGGGAGCTCCTGGGCAAAGGGCTGAGCGGGG...CGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR TCA 90 bp | AGGAAGAAGTACCTAGAAGTCGAGGTGAGTCACCCTGGGGCAGTGAGTGGGCCATGGAGCAGTAAGGGATaGAGACCATATTGGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: RKKYLEVEVSHPGAVSGPWSSKG*RPYWHS Trigger: GGAATGCCAATATGGTCTTCATCCCTTACTGCTCCA...TGGCCCACTCACTGCCCCAGGGTGACTCACCTCGACTTCTAGGTACTTCTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR GCA 90 bp | TCACTTTATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGGCCTCCAGGTCTTCCTaGCCTCGCTGCCCCCAACCC | + |
|
Preference number: 4 (lower is better) Translates to: SLYKIIQTNMISGGWEGLASRSS*PRCPQP Trigger: GGGTTGGGGGCAGCGAGGGCAGGAAGACCTGGAGGC...CAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATAAAGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR GCA 90 bp | AATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACTCCTCATTGAGCTGCTaGGCAGAGCAGGGATACAGG | + |
|
Preference number: 4 (lower is better) Translates to: NNTNEHDQWGLGGTVCADSSLSC*AEQGYR Trigger: CCTGTATCCCTGCTCTGCGCAGCAGCTCAATGAGGA...GTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR GCA 90 bp | ATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACTAGGTCCTCATTGAGCTaGTGCGCAGAGCAGGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: IIQTNMISGGWEGLSALTRSSLS*CAEQGY Trigger: GTATCCCTGCTCTGCGCAGCAGCTCAATGAGGACCT...AGTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR GCA 90 bp | ATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACTGGGGCAAAGCTGGCCTaGACATCCTTGAGTGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: IIQTNMISGGWEGLSALTGAKLA*TSLSVP Trigger: TGGTACACTCAAGGATGTGCAGGCCAGCTTTGCCCC...AGTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR GCA 90 bp | AGGAAGAAGTACCTAGAAGTCGAGGTGAGTCACCCTGGGGCAGTGAGTGGGCCAACATCGAAGCCCATATaGATAAGGAACTGTGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: RKKYLEVEVSHPGAVSGPTSKPI*IRNCAT Trigger: CGTGGCACAGTTCCTTATGCATATGGGCTTCGATGT...TGGCCCACTCACTGCCCCAGGGTGACTCACCTCGACTTCTAGGTACTTCTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR TCA 90 bp | TCACTTTATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGGGCGCAGGTCCTCATTaGGCTGCTGCGCAGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLYKIIQTNMISGGWEGLGAGPH*AAAQSR Trigger: CCTGCTCTGCGCAGCAGCTCAATGAGGACCTGCGCC...CAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATAAAGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR GCA 90 bp | TATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCGGGGCTGCCGTCATTaGAGGTCACCGACGTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YKIIQTNMISGGWEGLSARGCRH*RSPTCS Trigger: TGAACACGTCGGTGACCTGCAATGACGGCAGCCCCG...CGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CCA 90 bp | TATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCATGAGGGATTGCAGTaGGGCCAGGGGCAGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YKIIQTNMISGGWEGLSAHEGLQ*GQGQLS Trigger: AGACAGCTGCCCCTGGCCCCACTGCAATCCCTCATG...CGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR GCA 90 bp | TCACTTTATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGCTGCCCCCAACCCAATaGAGCAGGCCCAGCAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLYKIIQTNMISGGWEGLLPPTQ*SRPSSS Trigger: GCTACTGCTGGGCCTGCTGCATTGGGTTGGGGGCAG...CAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATAAAGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR GCA 90 bp | TATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCATGTTGCCCTCCACTaGCGTGAAGTCCAGCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YKIIQTNMISGGWEGLSAHVALH*REVQRE Trigger: TTCCCGCTGGACTTCACGGCAGTGGAGGGCAACATG...CGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR GCA 90 bp | ATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACTGAATACCAGTACCTGTaGGTGTGTGTGGCCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IIQTNMISGGWEGLSALTEYQYL*VCVASL Trigger: AAGACTGGCCACACACACGCACAGGTACTGGTATTC...AGTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CCA 90 bp | TATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGTTGGCATTCCACCAGTaGGGGTTCTCCTCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YKIIQTNMISGGWEGLSALAFHQ*GFSSGW Trigger: CCAGCCAGAGGAGAACCCCCACTGGTGGAATGCCAA...CGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS-3UTR CCA 90 bp | TATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGTCCCGTACCACCTCCTaGATGATGAGGGAGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: YKIIQTNMISGGWEGLSASRTTS*MMREPM Trigger: CATGGGCTCCCTCATCATCCAGGAGGTGGTACGGGA...CGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR GCA 90 bp | TCACTTTATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGCAACAGCAGCACCTTTaGCCCGCTCAGCCCTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLYKIIQTNMISGGWEGLQQQHL*PAQPFA Trigger: GGCAAAGGGCTGAGCGGGGCAAAGGTGCTGCTGTTG...CAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATAAAGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR GCA 90 bp | ATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACTATGCATAAGGAACTGTaGCACGTTCATCTCTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IIQTNMISGGWEGLSALTMHKEL*HVHLLP Trigger: GGGCAAGAGATGAACGTGGCACAGTTCCTTATGCAT...AGTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR GCA 90 bp | AATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACACATCGAAGCCCATATaGATAAGGAACTGTGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: NNTNEHDQWGLGGTVCADTSKPI*IRNCAT Trigger: CGTGGCACAGTTCCTTATGCATATGGGCTTCGATGT...GTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CCA 90 bp | AATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACCATTCTTGTCAGACTTaGGTGAAGCCCCACTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NNTNEHDQWGLGGTVCADHSCQT*VKPHSK Trigger: TTTGGAGTGGGGCTTCACCCAAGTCTGACAAGAATG...GTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR GCA 90 bp | TCACTTTATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGCATGTTGCCCTCCACTaGCGTGAAGTCCAGCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLYKIIQTNMISGGWEGLHVALH*REVQRE Trigger: TTCCCGCTGGACTTCACGGCAGTGGAGGGCAACATG...CAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATAAAGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR GCA 90 bp | TATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGGTAACCACCGCCGACTaGCCTTGGACTCCTTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: YKIIQTNMISGGWEGLSAVTTAD*PWTPSN Trigger: ATTTGAAGGAGTCCAAGGGCAGTCGGCGGTGGTTAC...CGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR GCA 90 bp | TATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGTCTGATCGCCGGTACTaGTTGTTGTCCAGGAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: YKIIQTNMISGGWEGLSASDRRY*LLSRNQ Trigger: CTGGTTCCTGGACAACAAGCAGTACCGGCGATCAGA...CGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CCA 90 bp | TCACTTTATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTTGGCATTCCACCAGTaGGGGTTCTCCTCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLYKIIQTNMISGGWEGLLAFHQ*GFSSGW Trigger: CCAGCCAGAGGAGAACCCCCACTGGTGGAATGCCAA...CAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATAAAGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CCA 90 bp | TCACTTTATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCCCGTACCACCTCCTaGATGATGAGGGAGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SLYKIIQTNMISGGWEGLSRTTS*MMREPM Trigger: CATGGGCTCCCTCATCATCCAGGAGGTGGTACGGGA...CAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATAAAGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CCA 90 bp | TATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGTCTCGGCCCAGATTCTaGATGTATAGCCACTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YKIIQTNMISGGWEGLSASRPRF*MYSHWP Trigger: AGGCCAGTGGCTATACATCCAGAATCTGGGCCGAGA...CGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR TCA 90 bp | TCACTTTATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGCACAGTTCTCCCGGTTaGAGCAATACCAGCCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLYKIIQTNMISGGWEGLHSSPG*SNTSRL Trigger: AAGGCGGCTGGTATTGCTTCAACCGGGAGAACTGTG...CAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATAAAGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR TCA 90 bp | TCACTTTATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGATTCCTCTCCTTCCTTaGACTGGCGCTGGCAACGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLYKIIQTNMISGGWEGLIPLLP*TGAGNA Trigger: AGCGTTGCCAGCGCCAGTTCAAGGAAGGAGAGGAAT...CAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATAAAGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CCA 90 bp | TCACTTTATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGCAGCTGTCTACCAGGTaGAAAGGGCAGCCCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SLYKIIQTNMISGGWEGLQLSTR*KGQPFM Trigger: CATGAAGGGCTGCCCTTTCCACCTGGTAGACAGCTG...CAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATAAAGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CCA 90 bp | TCACTTTATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGAAGGGCAGCCCTTCATaGGGGTTTTGCTGGCCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SLYKIIQTNMISGGWEGLKGSPS*GFCWPY Trigger: ATAAGGCCAGCAAAACCCCCATGAAGGGCTGCCCTT...CAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATAAAGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CCA 90 bp | TCACTTTATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGGGGTTCTCCTCTGGCTaGGAGGATAGAATACCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLYKIIQTNMISGGWEGLGFSSG*EDRIPV Trigger: TACTGGTATTCTATCCTCCCAGCCAGAGGAGAACCC...CAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATAAAGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS GCA 90 bp | TTGCCCTCCACTGCCGTGAAGTCCAGCGGGAAGCTCTCCACCGGCTaGCCGGCGCCCGGCTCCACCTCAGCCCGCTGCGGGAGCGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LPSTAVKSSGKLSTG*PAPGSTSARCGSGG Trigger: GCCGCCGCTCCCGCAGCGGGCTGAGGTGGAGCCGGGCGCCGGGCAGCCGGTGGAGAGCTTCCCGCTGGACTTCACGGCAGTGGAGGGCAA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS GCA 90 bp | CAGGCTCTTGACTTGCGCCATAAAGCTGTCCATGTTGCCCTCCACTaGCGTGAAGTCCAGCGGGAAGCTCTCCACCGGCTGCCCGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: QALDLRHKAVHVALH*REVQREALHRLPGA Trigger: GGCGCCGGGCAGCCGGTGGAGAGCTTCCCGCTGGACTTCACGGCAGTGGAGGGCAACATGGACAGCTTTATGGCGCAAGTCAAGAGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS TCA 90 bp | GCGGGGCTGCCGTCATTGCAGGTCACCGACGTGTTCAGCAGGAGGTaGAGGCGCAGGTCCTCATTGAGCTGCTGCGCAGAGCAGGGATAC | + |
|
Preference number: 5 (lower is better) Translates to: AGLPSLQVTDVFSRR*RRRSSLSCCAEQGY Trigger: GTATCCCTGCTCTGCGCAGCAGCTCAATGAGGACCTGCGCCTTCACCTCCTGCTGAACACGTCGGTGACCTGCAATGACGGCAGCCCCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS CCA 90 bp | TGCCCTGTGAACTGGTCCCGGATGGTAGGGCATGAGGGATTGCAGTaGGGCCAGGGGCAGCTGTCTACCAGGTGGAAAGGGCAGCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CPVNWSRMVGHEGLQ*GQGQLSTRWKGQPF Trigger: GAAGGGCTGCCCTTTCCACCTGGTAGACAGCTGCCCCTGGCCCCACTGCAATCCCTCATGCCCTACCATCCGGGACCAGTTCACAGGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS GCA 90 bp | GTTTTGCTGGCCTTATGGCTGTCATGGAAGCTCCGGTCCCAGCAGTaGAGTGCCCTGGGCAGTGAGGTCCCCTTCACCTGGACGTCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: VLLALWLSWKLRSQQ*SALGSEVPFTWTSV Trigger: GACGGACGTCCAGGTGAAGGGGACCTCACTGCCCAGGGCACTGCACTGCTGGGACCGGAGCTTCCATGACAGCCATAAGGCCAGCAAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS CCA 90 bp | ACCAGGTGGAAAGGGCAGCCCTTCATGGGGGTTTTGCTGGCCTTATaGCTGTCATGGAAGCTCCGGTCCCAGCAGTGCAGTGCCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TRWKGQPFMGVLLAL*LSWKLRSQQCSALG Trigger: GCCCAGGGCACTGCACTGCTGGGACCGGAGCTTCCATGACAGCCATAAGGCCAGCAAAACCCCCATGAAGGGCTGCCCTTTCCACCTGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CAA 90 bp | GAGGAAGAAGTACCTAGAAGTCGAGGTGAGTCACCCTGGGGCAGTGAGTGGGCCGTAGGGCATGAGGGATaGCAGTGGGGCCAGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EEEVPRSRGESPWGSEWAVGHEG*QWGQGQ Trigger: CTGCCCCTGGCCCCACTGCAATCCCTCATGCCCTAC...GGCCCACTCACTGCCCCAGGGTGACTCACCTCGACTTCTAGGTACTTCTTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CAA 90 bp | CTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGTGTAGGGCATGAGGGATaGCAGTGGGGCCAGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LDSGQTTPLARQWERIGSVGHEG*QWGQGQ Trigger: CTGCCCCTGGCCCCACTGCAATCCCTCATGCCCTAC...ACTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS TCA 90 bp | AGGTCACCGACGTGTTCAGCAGGAGGTGAAGGCGCAGGTCCTCATTaGGCTGCTGCGCAGAGCAGGGATACAGGGACTGTGCCAGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RSPTCSAGGEGAGPH*AAAQSRDTGTVPGS Trigger: AGAGCCTGGCACAGTCCCTGTATCCCTGCTCTGCGCAGCAGCTCAATGAGGACCTGCGCCTTCACCTCCTGCTGAACACGTCGGTGACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS GCA 90 bp | TGCCCTTGGACTCCTTCAAATAGTAGCCGGCGGGGCTGCCGTCATTaGAGGTCACCGACGTGTTCAGCAGGAGGTGAAGGCGCAGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CPWTPSNSSRRGCRH*RSPTCSAGGEGAGP Trigger: AGGACCTGCGCCTTCACCTCCTGCTGAACACGTCGGTGACCTGCAATGACGGCAGCCCCGCCGGCTACTATTTGAAGGAGTCCAAGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS GCA 90 bp | GGCAGCTGTCTACCAGGTGGAAAGGGCAGCCCTTCATGGGGGTTTTaGTGGCCTTATGGCTGTCATGGAAGCTCCGGTCCCAGCAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GSCLPGGKGSPSWGF*WPYGCHGSSGPSSA Trigger: TGCACTGCTGGGACCGGAGCTTCCATGACAGCCATAAGGCCAGCAAAACCCCCATGAAGGGCTGCCCTTTCCACCTGGTAGACAGCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CAA 90 bp | AGGAAGAAGTACCTAGAAGTCGAGGTGAGTCACCCTGGGGCAGTGAGTGGGCCAAGGCGCAGGTCCTCATaGAGCTGCTGCGCAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RKKYLEVEVSHPGAVSGPRRRSS*SCCAEQ Trigger: CTGCTCTGCGCAGCAGCTCAATGAGGACCTGCGCCT...TGGCCCACTCACTGCCCCAGGGTGACTCACCTCGACTTCTAGGTACTTCTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CAA 90 bp | AGGAAGAAGTACCTAGAAGTCGAGGTGAGTCACCCTGGGGCAGTGAGTGGGCCAGTGTGTGGCCAGTCTTaGGAGCTCATGAGGCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RKKYLEVEVSHPGAVSGPVCGQS*ELMRRR Trigger: GCGGCGCCTCATGAGCTCCAAAGACTGGCCACACAC...TGGCCCACTCACTGCCCCAGGGTGACTCACCTCGACTTCTAGGTACTTCTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CAA 90 bp | ATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACTGCCCCGCTCAGCCCTTaGCCCAGGAGCTCCCGTACC | + |
|
Preference number: 5 (lower is better) Translates to: IIQTNMISGGWEGLSALTAPLSP*PRSSRT Trigger: GGTACGGGAGCTCCTGGGCAAAGGGCTGAGCGGGGC...AGTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CAA 90 bp | CCTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGCATTCCTCTCCTTCCTaGAACTGGCGCTGGCAACGC | + |
|
Preference number: 5 (lower is better) Translates to: PGLRADHSSSQAVGENRQHSSPS*NWRWQR Trigger: GCGTTGCCAGCGCCAGTTCAAGGAAGGAGAGGAATG...CTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS CCA 90 bp | AATACCAGCCGCCTTCCAGAAAGAGTAACCACCGCCGACTGCCCTTaGACTCCTTCAAATAGTAGCCGGCGGGGCTGCCGTCATTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NTSRLPERVTTADCP*TPSNSSRRGCRHCR Trigger: CCTGCAATGACGGCAGCCCCGCCGGCTACTATTTGAAGGAGTCCAAGGGCAGTCGGCGGTGGTTACTCTTTCTGGAAGGCGGCTGGTATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS CCA 90 bp | AGCTGTCTACCAGGTGGAAAGGGCAGCCCTTCATGGGGGTTTTGCTaGCCTTATGGCTGTCATGGAAGCTCCGGTCCCAGCAGTGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SCLPGGKGSPSWGFC*PYGCHGSSGPSSAV Trigger: CACTGCACTGCTGGGACCGGAGCTTCCATGACAGCCATAAGGCCAGCAAAACCCCCATGAAGGGCTGCCCTTTCCACCTGGTAGACAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CAA 90 bp | GAGGAAGAAGTACCTAGAAGTCGAGGTGAGTCACCCTGGGGCAGTGAGTGGGCCCATTCCTCTCCTTCCTaGAACTGGCGCTGGCAACGC | + |
|
Preference number: 5 (lower is better) Translates to: EEEVPRSRGESPWGSEWAHSSPS*NWRWQR Trigger: GCGTTGCCAGCGCCAGTTCAAGGAAGGAGAGGAATG...GGCCCACTCACTGCCCCAGGGTGACTCACCTCGACTTCTAGGTACTTCTTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CAA 90 bp | GAGGAAGAAGTACCTAGAAGTCGAGGTGAGTCACCCTGGGGCAGTGAGTGGGCCTGCCACGTTCATCTCTaGCCCTGTGAACTGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: EEEVPRSRGESPWGSEWACHVHL*PCELVP Trigger: CGGGACCAGTTCACAGGGCAAGAGATGAACGTGGCA...GGCCCACTCACTGCCCCAGGGTGACTCACCTCGACTTCTAGGTACTTCTTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS TCA 90 bp | CGCAGTTCTCGGCCCAGATTCTGGATGTATAGCCACTGGCCTTCCTaGACCGGCTGTCCGGTGAGATGCACGTTATCCACGGTAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSSRPRFWMYSHWPS*TGCPVRCTLSTVSW Trigger: CCAGCTTACCGTGGATAACGTGCATCTCACCGGACAGCCGGTTCAGGAAGGCCAGTGGCTATACATCCAGAATCTGGGCCGAGAACTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS GCA 90 bp | CAGGTCCTCATTGAGCTGCTGCGCAGAGCAGGGATACAGGGACTGTaGCAGGCTCTTGACTTGCGCCATAAAGCTGTCCATGTTGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QVLIELLRRAGIQGL*QALDLRHKAVHVAL Trigger: GAGGGCAACATGGACAGCTTTATGGCGCAAGTCAAGAGCCTGGCACAGTCCCTGTATCCCTGCTCTGCGCAGCAGCTCAATGAGGACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS GCA 90 bp | GTGGGTGCACAGTTGATAGTATCAATGCAGTCTGATCGCCGGTACTaGTTGTTGTCCAGGAACCAGCCTGAGTCAGCCAGGCCCCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: VGAQLIVSMQSDRRY*LLSRNQPESARPRT Trigger: GGTGCGGGGCCTGGCTGACTCAGGCTGGTTCCTGGACAACAAGCAGTACCGGCGATCAGACTGCATTGATACTATCAACTGTGCACCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CAA 90 bp | CCTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGTGCCAGGCTCTTGACTaGCGCCATAAAGCTGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PGLRADHSSSQAVGENRQCQALD*RHKAVH Trigger: ATGGACAGCTTTATGGCGCAAGTCAAGAGCCTGGCA...CTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CAA 90 bp | GAGGAAGAAGTACCTAGAAGTCGAGGTGAGTCACCCTGGGGCAGTGAGTGGGCCGACTGTGCCAGGCTCTaGACTTGCGCCATAAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EEEVPRSRGESPWGSEWADCARL*TCAIKL Trigger: CAGCTTTATGGCGCAAGTCAAGAGCCTGGCACAGTC...GGCCCACTCACTGCCCCAGGGTGACTCACCTCGACTTCTAGGTACTTCTTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CAA 90 bp | ATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACTGCGGGGCTGCCGTCATaGCAGGTCACCGACGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IIQTNMISGGWEGLSALTAGLPS*QVTDVF Trigger: GAACACGTCGGTGACCTGCAATGACGGCAGCCCCGC...AGTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CAA 90 bp | GAGGAAGAAGTACCTAGAAGTCGAGGTGAGTCACCCTGGGGCAGTGAGTGGGCCTCACAGTTCTCCCGGTaGAAGCAATACCAGCCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: EEEVPRSRGESPWGSEWASQFSR*KQYQPP Trigger: AGGCGGCTGGTATTGCTTCAACCGGGAGAACTGTGA...GGCCCACTCACTGCCCCAGGGTGACTCACCTCGACTTCTAGGTACTTCTTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CAA 90 bp | CTGGACTCAGGGCAGACCACTCCTCTAGCCAGGCAGTGGGAGAGAATAGGCAGTGGGATGAAGACCATATaGGCATTCCACCAGTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LDSGQTTPLARQWERIGSGMKTI*AFHQWG Trigger: CCCCCACTGGTGGAATGCCAATATGGTCTTCATCCC...ACTGCCTATTCTCTCCCACTGCCTGGCTAGAGGAGTGGTCTGCCCTGAGTCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CAA 90 bp | AGGAAGAAGTACCTAGAAGTCGAGGTGAGTCACCCTGGGGCAGTGAGTGGGCCAGATCGCCGGTACTGCTaGTTGTCCAGGAACCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RKKYLEVEVSHPGAVSGPDRRYC*LSRNQP Trigger: AGGCTGGTTCCTGGACAACAAGCAGTACCGGCGATC...TGGCCCACTCACTGCCCCAGGGTGACTCACCTCGACTTCTAGGTACTTCTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS CCA 90 bp | TTTGCCCCGCTCAGCCCTTTGCCCAGGAGCTCCCGTACCACCTCCTaGATGATGAGGGAGCCCATGAAGGCATATTCATTCTTGTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: FAPLSPLPRSSRTTS*MMREPMKAYSFLSD Trigger: GTCTGACAAGAATGAATATGCCTTCATGGGCTCCCTCATCATCCAGGAGGTGGTACGGGAGCTCCTGGGCAAAGGGCTGAGCGGGGCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CAA 90 bp | AATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACAGGCGCAGGTCCTCATaGAGCTGCTGCGCAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: NNTNEHDQWGLGGTVCADRRRSS*SCCAEQ Trigger: CTGCTCTGCGCAGCAGCTCAATGAGGACCTGCGCCT...GTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS TCA 90 bp | GAATACCAGTACCTGTGCGTGTGTGTGGCCAGTCTTTGGAGCTCATaGGGCGCCGCATGGTGCTGTATCTGGAATCACAGTTCTCCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: EYQYLCVCVASLWSS*GAAWCCIWNHSSPG Trigger: ACCGGGAGAACTGTGATTCCAGATACAGCACCATGCGGCGCCTCATGAGCTCCAAAGACTGGCCACACACACGCACAGGTACTGGTATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS GCA 90 bp | CTGAGCCACCGTCTGCACATCGAAGCCCATATGCATAAGGAACTGTaGCACGTTCATCTCTTGCCCTGTGAACTGGTCCCGGATGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSHRLHIEAHMHKEL*HVHLLPCELVPDGR Trigger: CCTACCATCCGGGACCAGTTCACAGGGCAAGAGATGAACGTGGCACAGTTCCTTATGCATATGGGCTTCGATGTGCAGACGGTGGCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CAA 90 bp | AGGAAGAAGTACCTAGAAGTCGAGGTGAGTCACCCTGGGGCAGTGAGTGGGCCAATAAAGCTGTCCATGTaGCCCTCCACTGCCGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RKKYLEVEVSHPGAVSGPIKLSM*PSTAVK Trigger: CTTCACGGCAGTGGAGGGCAACATGGACAGCTTTAT...TGGCCCACTCACTGCCCCAGGGTGACTCACCTCGACTTCTAGGTACTTCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CAA 90 bp | TATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGGCGGGGCTGCCGTCATaGCAGGTCACCGACGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: YKIIQTNMISGGWEGLSAAGLPS*QVTDVF Trigger: GAACACGTCGGTGACCTGCAATGACGGCAGCCCCGC...CGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CAA 90 bp | AATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACGATCGCCGGTACTGCTaGTTGTCCAGGAACCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: NNTNEHDQWGLGGTVCADDRRYC*LSRNQP Trigger: AGGCTGGTTCCTGGACAACAAGCAGTACCGGCGATC...GTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS GCA 90 bp | ACATCGAAGCCCATATGCATAAGGAACTGTGCCACGTTCATCTCTTaGCCTGTGAACTGGTCCCGGATGGTAGGGCATGAGGGATTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TSKPICIRNCATFIS*PVNWSRMVGHEGLQ Trigger: CTGCAATCCCTCATGCCCTACCATCCGGGACCAGTTCACAGGGCAAGAGATGAACGTGGCACAGTTCCTTATGCATATGGGCTTCGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS CCA 90 bp | ATGAAGACCATATTGGCATTCCACCAGTGGGGGTTCTCCTCTGGCTaGGAGGATAGAATACCAGTACCTGTGCGTGTGTGTGGCCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: MKTILAFHQWGFSSG*EDRIPVPVRVCGQS Trigger: AGACTGGCCACACACACGCACAGGTACTGGTATTCTATCCTCCCAGCCAGAGGAGAACCCCCACTGGTGGAATGCCAATATGGTCTTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS-3UTR CAA 90 bp | AATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACTCACAGTTCTCCCGGTaGAAGCAATACCAGCCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: NNTNEHDQWGLGGTVCADSQFSR*KQYQPP Trigger: AGGCGGCTGGTATTGCTTCAACCGGGAGAACTGTGA...GTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CAA 90 bp | TATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGAGCATCCCTAGCAGCTaGCTGGGCTCCATCCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YKIIQTNMISGGWEGLSASIPSS*LGSIPC Trigger: GCAGGGGATGGAGCCCAGCAAGCTGCTAGGGATGCT...CGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CAA 90 bp | ATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCTGACTATAAAGCTGTCCATGTaGCCCTCCACTGCCGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IIQTNMISGGWEGLSALTIKLSM*PSTAVK Trigger: CTTCACGGCAGTGGAGGGCAACATGGACAGCTTTAT...AGTCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CAA 90 bp | TATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTCTGCGCGCCGGTACTGCTTGTaGTCCAGGAACCAGCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: YKIIQTNMISGGWEGLSARRYCL*SRNQPE Trigger: CTCAGGCTGGTTCCTGGACAACAAGCAGTACCGGCG...CGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS TCA 90 bp | GATGAGGGAGCCCATGAAGGCATATTCATTCTTGTCAGACTTGGGTaGAGCCCCACTCCAAACGTCACTGGAGCAGTAAGGGATGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: DEGAHEGIFILVRLG*SPTPNVTGAVRDED Trigger: GTCTTCATCCCTTACTGCTCCAGTGACGTTTGGAGTGGGGCTTCACCCAAGTCTGACAAGAATGAATATGCCTTCATGGGCTCCCTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS-3UTR CAA 90 bp | TCACTTTATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGGTGTGTGGCCAGTCTTaGGAGCTCATGAGGCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SLYKIIQTNMISGGWEGLVCGQS*ELMRRR Trigger: GCGGCGCCTCATGAGCTCCAAAGACTGGCCACACAC...CAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATAAAGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CAA 90 bp | TCACTTTATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGAGCATCCCTAGCAGCTaGCTGGGCTCCATCCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLYKIIQTNMISGGWEGLSIPSS*LGSIPC Trigger: GCAGGGGATGGAGCCCAGCAAGCTGCTAGGGATGCT...CAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATAAAGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CAA 90 bp | TCACTTTATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGCGCCGGTACTGCTTGTaGTCCAGGAACCAGCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLYKIIQTNMISGGWEGLRRYCL*SRNQPE Trigger: CTCAGGCTGGTTCCTGGACAACAAGCAGTACCGGCG...CAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATAAAGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CAA 90 bp | TCACTTTATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGGGGATGAAGACCATATaGGCATTCCACCAGTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLYKIIQTNMISGGWEGLGMKTI*AFHQWG Trigger: CCCCCACTGGTGGAATGCCAATATGGTCTTCATCCC...CAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATAAAGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS-3UTR CAA 90 bp | TCACTTTATAAAATAATACAAACGAACATGATCAGTGGGGGCTGGGAGGGACTGTGCCAGGCTCTTGACTaGCGCCATAAAGCTGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SLYKIIQTNMISGGWEGLCQALD*RHKAVH Trigger: ATGGACAGCTTTATGGCGCAAGTCAAGAGCCTGGCA...CAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATTATTTTATAAAGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS GCA 72 bp | ACTGCCGTGAAGTCCAGCGGGAAGCTCTCCACCGGCTaGCCGGCGCCCGGCTCCACCTCAGCCCGCTGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: TAVKSSGKLSTG*PAPGSTSARCG Trigger: CCCGCAGCGGGCTGAGGTGGAGCCGGGCGCCGGGCAGCCGGTGGAGAGCTTCCCGCTGGACTTCACGGCAGT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS GCA 72 bp | GGGGTGGCTGCTGGCCACGGCGCCTCCAGGTCTTCCTaGCCTCGCTGCCCCCAACCCAATGCAGCAGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GVAAGHGASRSS*PRCPQPNAAGP Trigger: TGGGCCTGCTGCATTGGGTTGGGGGCAGCGAGGGCAGGAAGACCTGGAGGCGCCGTGGCCAGCAGCCACCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS CAA 72 bp | CCGGCCAACAGCAGCACCTTTGCCCCGCTCAGCCCTTaGCCCAGGAGCTCCCGTACCACCTCCTGGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: PANSSTFAPLSP*PRSSRTTSWMM Trigger: CATCATCCAGGAGGTGGTACGGGAGCTCCTGGGCAAAGGGCTGAGCGGGGCAAAGGTGCTGCTGTTGGCCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS TCA 72 bp | GCTGGCAACGCTCTGGGACCATCCCACTCCAGTACCTaGTGCCACGGCGGATGGCGTCTGTGGGTGCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: AGNALGPSHSST*CHGGWRLWVHS Trigger: ACTGTGCACCCACAGACGCCATCCGCCGTGGCATCAGGTACTGGAGTGGGATGGTCCCAGAGCGTTGCCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS CCA 72 bp | CCCTTCATGGGGGTTTTGCTGGCCTTATGGCTGTCATaGAAGCTCCGGTCCCAGCAGTGCAGTGCCCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PFMGVLLALWLS*KLRSQQCSALG Trigger: GCCCAGGGCACTGCACTGCTGGGACCGGAGCTTCCATGACAGCCATAAGGCCAGCAAAACCCCCATGAAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS CCA 72 bp | AACTGGTCCCGGATGGTAGGGCATGAGGGATTGCAGTaGGGCCAGGGGCAGCTGTCTACCAGGTGGAAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: NWSRMVGHEGLQ*GQGQLSTRWKG Trigger: CCCTTTCCACCTGGTAGACAGCTGCCCCTGGCCCCACTGCAATCCCTCATGCCCTACCATCCGGGACCAGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS CAA 90 bp | AGGGACTGTGCCAGGCTCTTGACTTGCGCCATAAAGCTGTCCATGTaGCCCTCCACTGCCGTGAAGTCCAGCGGGAAGCTCTCCACCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RDCARLLTCAIKLSM*PSTAVKSSGKLSTG Trigger: GCCGGTGGAGAGCTTCCCGCTGGACTTCACGGCAGTGGAGGGCAACATGGACAGCTTTATGGCGCAAGTCAAGAGCCTGGCACAGTCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS CAA 90 bp | GGGCAGCTGTCTACCAGGTGGAAAGGGCAGCCCTTCATGGGGGTTTaGCTGGCCTTATGGCTGTCATGGAAGCTCCGGTCCCAGCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GQLSTRWKGQPFMGV*LALWLSWKLRSQQC Trigger: GCACTGCTGGGACCGGAGCTTCCATGACAGCCATAAGGCCAGCAAAACCCCCATGAAGGGCTGCCCTTTCCACCTGGTAGACAGCTGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS CAA 90 bp | ATCTCTTGCCCTGTGAACTGGTCCCGGATGGTAGGGCATGAGGGATaGCAGTGGGGCCAGGGGCAGCTGTCTACCAGGTGGAAAGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ISCPVNWSRMVGHEG*QWGQGQLSTRWKGQ Trigger: CTGCCCTTTCCACCTGGTAGACAGCTGCCCCTGGCCCCACTGCAATCCCTCATGCCCTACCATCCGGGACCAGTTCACAGGGCAAGAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS TCA 72 bp | CCGTCATTGCAGGTCACCGACGTGTTCAGCAGGAGGTaGAGGCGCAGGTCCTCATTGAGCTGCTGCGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PSLQVTDVFSRR*RRRSSLSCCAE Trigger: CTCTGCGCAGCAGCTCAATGAGGACCTGCGCCTTCACCTCCTGCTGAACACGTCGGTGACCTGCAATGACGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS TCA 72 bp | ACAGGCAGGCGGGGGCAAAGCTGGCCTGCACATCCTTaGGTGTACCACGCAGTTCTCGGCCCAGATTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: TGRRGQSWPAHP*VYHAVLGPDSG Trigger: TCCAGAATCTGGGCCGAGAACTGCGTGGTACACTCAAGGATGTGCAGGCCAGCTTTGCCCCCGCCTGCCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS GCA 72 bp | GACTTGCGCCATAAAGCTGTCCATGTTGCCCTCCACTaGCGTGAAGTCCAGCGGGAAGCTCTCCACCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DLRHKAVHVALH*REVQREALHRL Trigger: CAGCCGGTGGAGAGCTTCCCGCTGGACTTCACGGCAGTGGAGGGCAACATGGACAGCTTTATGGCGCAAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS GCA 72 bp | ACCAGCCGCCTTCCAGAAAGAGTAACCACCGCCGACTaGCCTTGGACTCCTTCAAATAGTAGCCGGCGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TSRLPERVTTAD*PWTPSNSSRRG Trigger: GCCCCGCCGGCTACTATTTGAAGGAGTCCAAGGGCAGTCGGCGGTGGTTACTCTTTCTGGAAGGCGGCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS CCA 72 bp | CGCCTTCCAGAAAGAGTAACCACCGCCGACTGCCCTTaGACTCCTTCAAATAGTAGCCGGCGGGGCTGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: RLPERVTTADCP*TPSNSSRRGCR Trigger: ACGGCAGCCCCGCCGGCTACTATTTGAAGGAGTCCAAGGGCAGTCGGCGGTGGTTACTCTTTCTGGAAGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS CCA 72 bp | TTCCTCTCCTTCCTTGAACTGGCGCTGGCAACGCTCTaGGACCATCCCACTCCAGTACCTGATGCCACGGCG | + |
|
Preference number: 6 (lower is better) Translates to: FLSFLELALATL*DHPTPVPDATA Trigger: CGCCGTGGCATCAGGTACTGGAGTGGGATGGTCCCAGAGCGTTGCCAGCGCCAGTTCAAGGAAGGAGAGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS CCA 72 bp | CCAGGTGGAAAGGGCAGCCCTTCATGGGGGTTTTGCTaGCCTTATGGCTGTCATGGAAGCTCCGGTCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PGGKGSPSWGFC*PYGCHGSSGPS Trigger: GCTGGGACCGGAGCTTCCATGACAGCCATAAGGCCAGCAAAACCCCCATGAAGGGCTGCCCTTTCCACCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS TCA 72 bp | ACGTGTTCAGCAGGAGGTGAAGGCGCAGGTCCTCATTaGGCTGCTGCGCAGAGCAGGGATACAGGGACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: TCSAGGEGAGPH*AAAQSRDTGTV Trigger: CACAGTCCCTGTATCCCTGCTCTGCGCAGCAGCTCAATGAGGACCTGCGCCTTCACCTCCTGCTGAACACGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS GCA 72 bp | ACTCCTTCAAATAGTAGCCGGCGGGGCTGCCGTCATTaGAGGTCACCGACGTGTTCAGCAGGAGGTGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: TPSNSSRRGCRH*RSPTCSAGGEG Trigger: GCCTTCACCTCCTGCTGAACACGTCGGTGACCTGCAATGACGGCAGCCCCGCCGGCTACTATTTGAAGGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS GCA 72 bp | CTACCAGGTGGAAAGGGCAGCCCTTCATGGGGGTTTTaGTGGCCTTATGGCTGTCATGGAAGCTCCGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LPGGKGSPSWGF*WPYGCHGSSGP Trigger: GGGACCGGAGCTTCCATGACAGCCATAAGGCCAGCAAAACCCCCATGAAGGGCTGCCCTTTCCACCTGGTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS CAA 72 bp | GCCAGGCTCTTGACTTGCGCCATAAAGCTGTCCATGTaGCCCTCCACTGCCGTGAAGTCCAGCGGGAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ARLLTCAIKLSM*PSTAVKSSGKL Trigger: GAGCTTCCCGCTGGACTTCACGGCAGTGGAGGGCAACATGGACAGCTTTATGGCGCAAGTCAAGAGCCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS CAA 90 bp | CTGCTGCGCAGAGCAGGGATACAGGGACTGTGCCAGGCTCTTGACTaGCGCCATAAAGCTGTCCATGTTGCCCTCCACTGCCGTGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LLRRAGIQGLCQALD*RHKAVHVALHCREV Trigger: GACTTCACGGCAGTGGAGGGCAACATGGACAGCTTTATGGCGCAAGTCAAGAGCCTGGCACAGTCCCTGTATCCCTGCTCTGCGCAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS CAA 90 bp | TTGAGCTGCTGCGCAGAGCAGGGATACAGGGACTGTGCCAGGCTCTaGACTTGCGCCATAAAGCTGTCCATGTTGCCCTCCACTGCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: LSCCAEQGYRDCARL*TCAIKLSMLPSTAV Trigger: CACGGCAGTGGAGGGCAACATGGACAGCTTTATGGCGCAAGTCAAGAGCCTGGCACAGTCCCTGTATCCCTGCTCTGCGCAGCAGCTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS CAA 90 bp | GGTGCACAGTTGATAGTATCAATGCAGTCTGATCGCCGGTACTGCTaGTTGTCCAGGAACCAGCCTGAGTCAGCCAGGCCCCGCACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GAQLIVSMQSDRRYC*LSRNQPESARPRTW Trigger: CCAGGTGCGGGGCCTGGCTGACTCAGGCTGGTTCCTGGACAACAAGCAGTACCGGCGATCAGACTGCATTGATACTATCAACTGTGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS TCA 72 bp | CGGCCCAGATTCTGGATGTATAGCCACTGGCCTTCCTaGACCGGCTGTCCGGTGAGATGCACGTTATCCACG | + |
|
Preference number: 6 (lower is better) Translates to: RPRFWMYSHWPS*TGCPVRCTLST Trigger: CGTGGATAACGTGCATCTCACCGGACAGCCGGTTCAGGAAGGCCAGTGGCTATACATCCAGAATCTGGGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS CCA 72 bp | AAAGGGCAGCCCTTCATGGGGGTTTTGCTGGCCTTATaGCTGTCATGGAAGCTCCGGTCCCAGCAGTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: KGQPFMGVLLAL*LSWKLRSQQCS Trigger: ACTGCACTGCTGGGACCGGAGCTTCCATGACAGCCATAAGGCCAGCAAAACCCCCATGAAGGGCTGCCCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS CAA 72 bp | TGCGCAGAGCAGGGATACAGGGACTGTGCCAGGCTCTaGACTTGCGCCATAAAGCTGTCCATGTTGCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CAEQGYRDCARL*TCAIKLSMLPS Trigger: GGAGGGCAACATGGACAGCTTTATGGCGCAAGTCAAGAGCCTGGCACAGTCCCTGTATCCCTGCTCTGCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS CAA 72 bp | TCTACCAGGTGGAAAGGGCAGCCCTTCATGGGGGTTTaGCTGGCCTTATGGCTGTCATGGAAGCTCCGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: STRWKGQPFMGV*LALWLSWKLRS Trigger: GGACCGGAGCTTCCATGACAGCCATAAGGCCAGCAAAACCCCCATGAAGGGCTGCCCTTTCCACCTGGTAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS CCA 72 bp | CTCAGCCCTTTGCCCAGGAGCTCCCGTACCACCTCCTaGATGATGAGGGAGCCCATGAAGGCATATTCATTC | + |
|
Preference number: 6 (lower is better) Translates to: LSPLPRSSRTTS*MMREPMKAYSF Trigger: GAATGAATATGCCTTCATGGGCTCCCTCATCATCCAGGAGGTGGTACGGGAGCTCCTGGGCAAAGGGCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS CCA 72 bp | GGCTGTCCGGTGAGATGCACGTTATCCACGGTAAGCTaGGCCTCATCGAAAAGCCACTGTACCACGAACACC | + |
|
Preference number: 6 (lower is better) Translates to: GCPVRCTLSTVS*ASSKSHCTTNT Trigger: GGTGTTCGTGGTACAGTGGCTTTTCGATGAGGCCCAGCTTACCGTGGATAACGTGCATCTCACCGGACAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS CCA 72 bp | AGGAACTGTGCCACGTTCATCTCTTGCCCTGTGAACTaGTCCCGGATGGTAGGGCATGAGGGATTGCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RNCATFISCPVN*SRMVGHEGLQW Trigger: CCACTGCAATCCCTCATGCCCTACCATCCGGGACCAGTTCACAGGGCAAGAGATGAACGTGGCACAGTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS CAA 72 bp | AGAGCAGGGATACAGGGACTGTGCCAGGCTCTTGACTaGCGCCATAAAGCTGTCCATGTTGCCCTCCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: RAGIQGLCQALD*RHKAVHVALHC Trigger: GCAGTGGAGGGCAACATGGACAGCTTTATGGCGCAAGTCAAGAGCCTGGCACAGTCCCTGTATCCCTGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS CAA 72 bp | ATAGTATCAATGCAGTCTGATCGCCGGTACTGCTTGTaGTCCAGGAACCAGCCTGAGTCAGCCAGGCCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: IVSMQSDRRYCL*SRNQPESARPR Trigger: GCGGGGCCTGGCTGACTCAGGCTGGTTCCTGGACAACAAGCAGTACCGGCGATCAGACTGCATTGATACTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS CAA 72 bp | CTGATGCCACGGCGGATGGCGTCTGTGGGTGCACAGTaGATAGTATCAATGCAGTCTGATCGCCGGTACTGC | + |
|
Preference number: 6 (lower is better) Translates to: LMPRRMASVGAQ*IVSMQSDRRYC Trigger: GCAGTACCGGCGATCAGACTGCATTGATACTATCAACTGTGCACCCACAGACGCCATCCGCCGTGGCATCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS CAA 90 bp | ATGAGGCGCCGCATGGTGCTGTATCTGGAATCACAGTTCTCCCGGTaGAAGCAATACCAGCCGCCTTCCAGAAAGAGTAACCACCGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: MRRRMVLYLESQFSR*KQYQPPSRKSNHRR Trigger: TCGGCGGTGGTTACTCTTTCTGGAAGGCGGCTGGTATTGCTTCAACCGGGAGAACTGTGATTCCAGATACAGCACCATGCGGCGCCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS CAA 90 bp | GCACAGTTGATAGTATCAATGCAGTCTGATCGCCGGTACTGCTTGTaGTCCAGGAACCAGCCTGAGTCAGCCAGGCCCCGCACCTGGATA | + |
|
Preference number: 6 (lower is better) Translates to: AQLIVSMQSDRRYCL*SRNQPESARPRTWI Trigger: TATCCAGGTGCGGGGCCTGGCTGACTCAGGCTGGTTCCTGGACAACAAGCAGTACCGGCGATCAGACTGCATTGATACTATCAACTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS CAA 90 bp | CTCCAGTACCTGATGCCACGGCGGATGGCGTCTGTGGGTGCACAGTaGATAGTATCAATGCAGTCTGATCGCCGGTACTGCTTGTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LQYLMPRRMASVGAQ*IVSMQSDRRYCLLS Trigger: GGACAACAAGCAGTACCGGCGATCAGACTGCATTGATACTATCAACTGTGCACCCACAGACGCCATCCGCCGTGGCATCAGGTACTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS TCA 72 bp | TACCTGTGCGTGTGTGTGGCCAGTCTTTGGAGCTCATaGGGCGCCGCATGGTGCTGTATCTGGAATCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: YLCVCVASLWSS*GAAWCCIWNHS Trigger: ACTGTGATTCCAGATACAGCACCATGCGGCGCCTCATGAGCTCCAAAGACTGGCCACACACACGCACAGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS CCA 72 bp | AAGCAATTCCATTCCTCTCCTTCCTTGAACTGGCGCTaGCAACGCTCTGGGACCATCCCACTCCAGTACCTG | + |
|
Preference number: 6 (lower is better) Translates to: KQFHSSPSLNWR*QRSGTIPLQYL Trigger: CAGGTACTGGAGTGGGATGGTCCCAGAGCGTTGCCAGCGCCAGTTCAAGGAAGGAGAGGAATGGAATTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
||
| CDS CAA 72 bp | AGAATACCAGTACCTGTGCGTGTGTGTGGCCAGTCTTaGGAGCTCATGAGGCGCCGCATGGTGCTGTATCTG | + |
|
Preference number: 6 (lower is better) Translates to: RIPVPVRVCGQS*ELMRRRMVLYL Trigger: CAGATACAGCACCATGCGGCGCCTCATGAGCTCCAAAGACTGGCCACACACACGCACAGGTACTGGTATTCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
||
| CDS CAA 90 bp | TGGGAGGATAGAATACCAGTACCTGTGCGTGTGTGTGGCCAGTCTTaGGAGCTCATGAGGCGCCGCATGGTGCTGTATCTGGAATCACAG | + |
|
Preference number: 6 (lower is better) Translates to: WEDRIPVPVRVCGQS*ELMRRRMVLYLESQ Trigger: CTGTGATTCCAGATACAGCACCATGCGGCGCCTCATGAGCTCCAAAGACTGGCCACACACACGCACAGGTACTGGTATTCTATCCTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
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| CDS GCA 72 bp | CCCATATGCATAAGGAACTGTGCCACGTTCATCTCTTaGCCTGTGAACTGGTCCCGGATGGTAGGGCATGAG | + |
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Preference number: 6 (lower is better) Translates to: PICIRNCATFIS*PVNWSRMVGHE Trigger: CTCATGCCCTACCATCCGGGACCAGTTCACAGGGCAAGAGATGAACGTGGCACAGTTCCTTATGCATATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS CAA 72 bp | TTGATAGTATCAATGCAGTCTGATCGCCGGTACTGCTaGTTGTCCAGGAACCAGCCTGAGTCAGCCAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: LIVSMQSDRRYC*LSRNQPESARP Trigger: GGGCCTGGCTGACTCAGGCTGGTTCCTGGACAACAAGCAGTACCGGCGATCAGACTGCATTGATACTATCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS TCA 72 bp | AAGCCCCACTCCAAACGTCACTGGAGCAGTAAGGGATaGAGACCATATTGGCATTCCACCAGTGGGGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: KPHSKRHWSSKG*RPYWHSTSGGS Trigger: AGAACCCCCACTGGTGGAATGCCAATATGGTCTTCATCCCTTACTGCTCCAGTGACGTTTGGAGTGGGGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
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| CDS TCA 72 bp | GTCTGTGGGTGCACAGTTGATAGTATCAATGCAGTCTaGTCGCCGGTACTGCTTGTTGTCCAGGAACCAGCC | + |
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Preference number: 6 (lower is better) Translates to: VCGCTVDSINAV*SPVLLVVQEPA Trigger: GGCTGGTTCCTGGACAACAAGCAGTACCGGCGATCAGACTGCATTGATACTATCAACTGTGCACCCACAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS GCA 72 bp | CAGTTGATAGTATCAATGCAGTCTGATCGCCGGTACTaGTTGTTGTCCAGGAACCAGCCTGAGTCAGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: QLIVSMQSDRRY*LLSRNQPESAR Trigger: CCTGGCTGACTCAGGCTGGTTCCTGGACAACAAGCAGTACCGGCGATCAGACTGCATTGATACTATCAACTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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| CDS CCA 72 bp | ATATTGGCATTCCACCAGTGGGGGTTCTCCTCTGGCTaGGAGGATAGAATACCAGTACCTGTGCGTGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: ILAFHQWGFSSG*EDRIPVPVRVC Trigger: ACACACACGCACAGGTACTGGTATTCTATCCTCCCAGCCAGAGGAGAACCCCCACTGGTGGAATGCCAATAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
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| CDS CAA 72 bp | AGGGAGCCCATGAAGGCATATTCATTCTTGTCAGACTaGGGTGAAGCCCCACTCCAAACGTCACTGGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: REPMKAYSFLSD*GEAPLQTSLEQ Trigger: CTGCTCCAGTGACGTTTGGAGTGGGGCTTCACCCAAGTCTGACAAGAATGAATATGCCTTCATGGGCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
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| CDS TCA 72 bp | GCCCATGAAGGCATATTCATTCTTGTCAGACTTGGGTaGAGCCCCACTCCAAACGTCACTGGAGCAGTAAGG | + |
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Preference number: 6 (lower is better) Translates to: AHEGIFILVRLG*SPTPNVTGAVR Trigger: CCTTACTGCTCCAGTGACGTTTGGAGTGGGGCTTCACCCAAGTCTGACAAGAATGAATATGCCTTCATGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 ENSMUST00000150458.2 |
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| CDS CAA 72 bp | TGGATGATGAGGGAGCCCATGAAGGCATATTCATTCTaGTCAGACTTGGGTGAAGCCCCACTCCAAACGTCA | + |
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Preference number: 6 (lower is better) Translates to: WMMREPMKAYSF*SDLGEAPLQTS Trigger: TGACGTTTGGAGTGGGGCTTCACCCAAGTCTGACAAGAATGAATATGCCTTCATGGGCTCCCTCATCATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106177.8 ENSMUST00000106178.9 |
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