RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NOTCH2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000027878

Ensembl transcript IDs: ENSMUST00000079812.8

Found 504 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGAGACCCATGGCCAGAGTAAACCCTGTGAGGCACCTGTGAGGTaGCGGGAATGTGGGAACAGGAGGCTGAAGTCGGTTTCCAGGTCA +
Preference number: 1 (lower is better)
Translates to: AETHGQSKPCEAPVR*RECGNRRLKSVSRS
Trigger: TGACCTGGAAACCGACTTCAGCCTCCTGTTCCCACATTCCCGGCACCTCACAGGTGCCTCACAGGGTTTACTCTGGCCATGGGTCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR CCA 90 bp AGCGAGGGAAGATGGAGAGAAGGCTTCTCACGCTTGCCTCAGGTTTaGAGCCTCTCTCTCCTGCCTCCGAAAGATGGTCACGGACGGGAC +
Preference number: 1 (lower is better)
Translates to: SEGRWREGFSRLPQV*SLSLLPPKDGHGRD
Trigger: GTCCCGTCCGTGACCATCTTTCGGAGGCAGGAGAGAGAGGCTCCAAACCTGAGGCAAGCGTGAGAAGCCTTCTCTCCATCTTCCCTCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR CCA 90 bp TGTGTCTGGGGTAGGTCCAGTGACCAGACCCAGTGGCTGGATTCTTaGTTACTGTTCGCAGGCAGTGGCACTAGAGCTTTAGGGCAGACA +
Preference number: 1 (lower is better)
Translates to: CVWGRSSDQTQWLDS*LLFAGSGTRALGQT
Trigger: TGTCTGCCCTAAAGCTCTAGTGCCACTGCCTGCGAACAGTAACCAAGAATCCAGCCACTGGGTCTGGTCACTGGACCTACCCCAGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR CCA 90 bp CTTCTGATCGGAAAGCAAAGTGGTCCTAAGGAAGTTGGCAGTCACTaGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAATGGCAAGGG +
Preference number: 1 (lower is better)
Translates to: LLIGKQSGPKEVGSH*VPCAPGKFCPKWQG
Trigger: CCCTTGCCATTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTTCCTTAGGACCACTTTGCTTTCCGATCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR GCA 90 bp CTCATACAACCTCGGCCTCTTGACTCAGGTCCCGGAGTAAGGGACTaGCCATCCCCCTTTCTTTTCCTGGACACTACACAGGTCAAGAAT +
Preference number: 1 (lower is better)
Translates to: LIQPRPLDSGPGVRD*PSPFLFLDTTQVKN
Trigger: ATTCTTGACCTGTGTAGTGTCCAGGAAAAGAAAGGGGGATGGGCAGTCCCTTACTCCGGGACCTGAGTCAAGAGGCCGAGGTTGTATGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR CCA 90 bp CACAAATGCTCCAGCAGAACTCATTTTCCTGTGTCCTGGGTGCCATaGCACCAGGAAGCAGTGACTGATGGCATGGCCATAGGGGCAATT +
Preference number: 1 (lower is better)
Translates to: HKCSSRTHFPVSWVP*HQEAVTDGMAIGAI
Trigger: AATTGCCCCTATGGCCATGCCATCAGTCACTGCTTCCTGGTGCCATGGCACCCAGGACACAGGAAAATGAGTTCTGCTGGAGCATTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR CCA 90 bp TTTGTTCTTCTCTGTGTCTGGGGTAGGTCCAGTGACCAGACCCAGTaGCTGGATTCTTGGTTACTGTTCGCAGGCAGTGGCACTAGAGCT +
Preference number: 1 (lower is better)
Translates to: FVLLCVWGRSSDQTQ*LDSWLLFAGSGTRA
Trigger: AGCTCTAGTGCCACTGCCTGCGAACAGTAACCAAGAATCCAGCCACTGGGTCTGGTCACTGGACCTACCCCAGACACAGAGAAGAACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR TCA 90 bp AAGGCTTGTCACTCATCTTGCATCTCCATGAACTTGCAGGATGGGTaGAGGTCAGTAGGAGCTGCGTCCTCCCCTAAAACTGCACAGAGA +
Preference number: 1 (lower is better)
Translates to: KACHSSCISMNLQDG*RSVGAASSPKTAQR
Trigger: TCTCTGTGCAGTTTTAGGGGAGGACGCAGCTCCTACTGACCTTCACCCATCCTGCAAGTTCATGGAGATGCAAGATGAGTGACAAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR TCA 90 bp TGCACCAGTCTCTCAGATCACACGCTGTGGAAAGAAACTGGCTTCTaGTCGGAAAGCAAAGTGGTCCTAAGGAAGTTGGCAGTCACTGGG +
Preference number: 1 (lower is better)
Translates to: CTSLSDHTLWKETGF*SESKVVLRKLAVTG
Trigger: CCCAGTGACTGCCAACTTCCTTAGGACCACTTTGCTTTCCGATCAGAAGCCAGTTTCTTTCCACAGCGTGTGATCTGAGAGACTGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR TCA 90 bp CCCTTCTCCACATCTGGAACCCAAATACAGACTCCACGTCTTCACTaGGAACCTACTGTGTGTGCACCAGTCTCTCAGATCACACGCTGT +
Preference number: 1 (lower is better)
Translates to: PFSTSGTQIQTPRLH*EPTVCAPVSQITRC
Trigger: ACAGCGTGTGATCTGAGAGACTGGTGCACACACAGTAGGTTCTCAGTGAAGACGTGGAGTCTGTATTTGGGTTCCAGATGTGGAGAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR GCA 90 bp AACCCAAATACAGACTCCACGTCTTCACTGAGAACCTACTGTGTGTaGACCAGTCTCTCAGATCACACGCTGTGGAAAGAAACTGGCTTC +
Preference number: 1 (lower is better)
Translates to: NPNTDSTSSLRTYCV*TSLSDHTLWKETGF
Trigger: GAAGCCAGTTTCTTTCCACAGCGTGTGATCTGAGAGACTGGTGCACACACAGTAGGTTCTCAGTGAAGACGTGGAGTCTGTATTTGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR TCA 90 bp ACATCCCTCCTCCTAAATCCCAAAGGATCCTCTTTGAGGGATCCTTaGAGGAGAAACAGCAAGTTTGTTCTTCTCTGTGTCTGGGGTAGG +
Preference number: 1 (lower is better)
Translates to: TSLLLNPKGSSLRDP*RRNSKFVLLCVWGR
Trigger: CCTACCCCAGACACAGAGAAGAACAAACTTGCTGTTTCTCCTTCAAGGATCCCTCAAAGAGGATCCTTTGGGATTTAGGAGGAGGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR CCA 90 bp GTTAAAGTCCGGGTCCTGAAATCACACGTGAACACTGAACACCTTTaGTTCATTTCTATGCAAGACTTCAAGTGGCCAAGTTTAACAAAA +
Preference number: 1 (lower is better)
Translates to: VKVRVLKSHVNTEHL*FISMQDFKWPSLTK
Trigger: TTTTGTTAAACTTGGCCACTTGAAGTCTTGCATAGAAATGAACCAAAGGTGTTCAGTGTTCACGTGTGATTTCAGGACCCGGACTTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR-3UTR GCA 90 bp GGTCCCGGAGTAAGGGACTGCCCATCCCCCTTTCTTTTCCTGGACACTACACAGTCACTGGGTCCCCTGTaGCCCAGGCAAGTTCTGTCC +
Preference number: 2 (lower is better)
Translates to: GPGVRDCPSPFLFLDTTQSLGPL*PRQVLS
Trigger: GGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGA...CTGTGTAGTGTCCAGGAAAAGAAAGGGGGATGGGCAGTCCCTTACTCCGGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR-3UTR CCA 90 bp AAGTTGGCAGTCACTGGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAATGGCGAGAGCGAGGGAAGATaGAGAGAAGGCTTCTCACGC +
Preference number: 2 (lower is better)
Translates to: KLAVTGSPVPQASSVLNGESEGR*REGFSR
Trigger: GCGTGAGAAGCCTTCTCTCCATCTTCCCTCGCTCTC...GCCATTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR-3UTR CCA 90 bp ACATGCAGGGGAGAGAAATTAAGGTGCAGGTTCAGAAGGAGGCTTCTAGTCCCCGAGGTGCCGGGAATGTaGGAACAGGAGGCTGAAGTC +
Preference number: 2 (lower is better)
Translates to: TCRGEKLRCRFRRRLLVPEVPGM*EQEAEV
Trigger: GACTTCAGCCTCCTGTTCCCACATTCCCGGCACCTC...GGGGACTAGAAGCCTCCTTCTGAACCTGCACCTTAATTTCTCTCCCCTGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR-3UTR TCA 90 bp GGTCCCGGAGTAAGGGACTGCCCATCCCCCTTTCTTTTCCTGGACACTACACAGGGTACAATCTTAATCTaGACACAAGGACAATGGGGA +
Preference number: 2 (lower is better)
Translates to: GPGVRDCPSPFLFLDTTQGTILI*TQGQWG
Trigger: TCCCCATTGTCCTTGTGTTCAGATTAAGATTGTACC...CTGTGTAGTGTCCAGGAAAAGAAAGGGGGATGGGCAGTCCCTTACTCCGGGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR-3UTR GCA 90 bp TGGAACCCAAATACAGACTCCACGTCTTCACTGAGAACCTACTGTGTGTGCACCATCTATGAGGAGCAGTaGAGCAGCCAAGAGTACCTT +
Preference number: 2 (lower is better)
Translates to: WNPNTDSTSSLRTYCVCTIYEEQ*SSQEYL
Trigger: AAGGTACTCTTGGCTGCTGCACTGCTCCTCATAGAT...GGTGCACACACAGTAGGTTCTCAGTGAAGACGTGGAGTCTGTATTTGGGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR-3UTR CCA 90 bp GGAGACTGTCCCTTCTCCACATCTGGAACCCAAATACAGACTCCACGTCTTCACGCTGTGGAAAGAAACTaGCTTCTGATCGGAAAGCAA +
Preference number: 2 (lower is better)
Translates to: GDCPFSTSGTQIQTPRLHAVERN*LLIGKQ
Trigger: TTGCTTTCCGATCAGAAGCCAGTTTCTTTCCACAGC...GTGAAGACGTGGAGTCTGTATTTGGGTTCCAGATGTGGAGAAGGGACAGTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR CAA 90 bp TCCACGGTATTCTCCAAATTAAAAGAGAGCAAGGGGTCTCAAGGCTaGTCACTCATCTTGCATCTCCATGAACTTGCAGGATGGGTGAAG +
Preference number: 2 (lower is better)
Translates to: STVFSKLKESKGSQG*SLILHLHELAGWVK
Trigger: CTTCACCCATCCTGCAAGTTCATGGAGATGCAAGATGAGTGACAAGCCTTGAGACCCCTTGCTCTCTTTTAATTTGGAGAATACCGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR-3UTR TCA 90 bp GTAAAAACAGTGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTCCAGGAAGCAGTGACTaGTGGCATGGCCATAGGGGC +
Preference number: 2 (lower is better)
Translates to: VKTVCIFLPIFSQEHEVIPGSSD*WHGHRG
Trigger: GCCCCTATGGCCATGCCATCAGTCACTGCTTCCTGG...AATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACACTGTTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR-3UTR CCA 90 bp AGATATAATGTCACTTTTCAGGGAAATATACACGAGGAAGTTGCCATAGTACCACGCTTGCCTCAGGTTTaGAGCCTCTCTCTCCTGCCT +
Preference number: 2 (lower is better)
Translates to: RYNVTFQGNIHEEVAIVPRLPQV*SLSLLP
Trigger: AGGCAGGAGAGAGAGGCTCCAAACCTGAGGCAAGCG...TGGTACTATGGCAACTTCCTCGTGTATATTTCCCTGAAAAGTGACATTATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR-3UTR CCA 90 bp GGGGCAATTATTAGCCCTATGACTGAGGAGAAAACTATCATCCTAGATTACCACCATGAACTTGCAGGATaGGTGAAGGTCAGTAGGAGC +
Preference number: 2 (lower is better)
Translates to: GAIISPMTEEKTIILDYHHELAG*VKVSRS
Trigger: GCTCCTACTGACCTTCACCCATCCTGCAAGTTCATG...GTGGTAATCTAGGATGATAGTTTTCTCCTCAGTCATAGGGCTAATAATTGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR-3UTR CCA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACCCTGATGAGTGTATATaGGGCCCCACATGCAGGGGA +
Preference number: 2 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYPDECI*GPTCRG
Trigger: TCCCCTGCATGTGGGGCCCCATATACACTCATCAGG...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR-3UTR GCA 90 bp GGGGCAATTATTAGCCCTATGACTGAGGAGAAAACTATCATCCTAGATTACCACGGAGAGAAATTAAGGTaGAGGTTCAGAAGGAGGCTT +
Preference number: 2 (lower is better)
Translates to: GAIISPMTEEKTIILDYHGEKLR*RFRRRL
Trigger: AAGCCTCCTTCTGAACCTGCACCTTAATTTCTCTCC...GTGGTAATCTAGGATGATAGTTTTCTCCTCAGTCATAGGGCTAATAATTGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR-3UTR TCA 90 bp GGGGCAATTATTAGCCCTATGACTGAGGAGAAAACTATCATCCTAGATTACCACAGTTCAATTTTATACTaGCTAGGCCAACTGACAGAA +
Preference number: 2 (lower is better)
Translates to: GAIISPMTEEKTIILDYHSSILY*LGQLTE
Trigger: TTCTGTCAGTTGGCCTAGTCAGTATAAAATTGAACT...GTGGTAATCTAGGATGATAGTTTTCTCCTCAGTCATAGGGCTAATAATTGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR-3UTR GCA 90 bp AGATATAATGTCACTTTTCAGGGAAATATACACGAGGAAGTTGCCATAGTACCAGCTTGTCACTCATCTTaGATCTCCATGAACTTGCAG +
Preference number: 2 (lower is better)
Translates to: RYNVTFQGNIHEEVAIVPACHSS*ISMNLQ
Trigger: CTGCAAGTTCATGGAGATGCAAGATGAGTGACAAGC...TGGTACTATGGCAACTTCCTCGTGTATATTTCCCTGAAAAGTGACATTATATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR-3UTR TCA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACTTTCCAGGTCAGGAATaGTTAAGAGCACAGACATCT +
Preference number: 2 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYFPGQE*LRAQTS
Trigger: AGATGTCTGTGCTCTTAATCATTCCTGACCTGGAAA...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR-3UTR TCA 90 bp AGATATAATGTCACTTTTCAGGGAAATATACACGAGGAAGTTGCCATAGTACCACAATTATTAGCCCTATaGCTGAGGAGAAAACTATCA +
Preference number: 2 (lower is better)
Translates to: RYNVTFQGNIHEEVAIVPQLLAL*LRRKLS
Trigger: TGATAGTTTTCTCCTCAGTCATAGGGCTAATAATTG...TGGTACTATGGCAACTTCCTCGTGTATATTTCCCTGAAAAGTGACATTATATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR-3UTR GCA 90 bp AGATATAATGTCACTTTTCAGGGAAATATACACGAGGAAGTTGCCATAGTACCATTTGGTTCATTTCTATaGAAGACTTCAAGTGGCCAA +
Preference number: 2 (lower is better)
Translates to: RYNVTFQGNIHEEVAIVPFGSFL*KTSSGQ
Trigger: TTGGCCACTTGAAGTCTTGCATAGAAATGAACCAAA...TGGTACTATGGCAACTTCCTCGTGTATATTTCCCTGAAAAGTGACATTATATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR-3UTR GCA 90 bp AGATATAATGTCACTTTTCAGGGAAATATACACGAGGAAGTTGCCATAGTACCAATGAAGACTAGTGTGTaGATTTTCCATAGAAGCATA +
Preference number: 2 (lower is better)
Translates to: RYNVTFQGNIHEEVAIVPMKTSV*IFHRSI
Trigger: TATGCTTCTATGGAAAATGCACACACTAGTCTTCAT...TGGTACTATGGCAACTTCCTCGTGTATATTTCCCTGAAAAGTGACATTATATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR GCA 72 bp AGAGCGAGGGAAGATGGAGAGAAGGCTTCTCACGCTTaGCTCAGGTTTGGAGCCTCTCTCTCCTGCCTCCGA +
Preference number: 3 (lower is better)
Translates to: RAREDGEKASHA*LRFGASLSCLR
Trigger: TCGGAGGCAGGAGAGAGAGGCTCCAAACCTGAGGCAAGCGTGAGAAGCCTTCTCTCCATCTTCCCTCGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR GCA 72 bp CATGGCCAGAGTAAACCCTGTGAGGCACCTGTGAGGTaGCGGGAATGTGGGAACAGGAGGCTGAAGTCGGTT +
Preference number: 3 (lower is better)
Translates to: HGQSKPCEAPVR*RECGNRRLKSV
Trigger: AACCGACTTCAGCCTCCTGTTCCCACATTCCCGGCACCTCACAGGTGCCTCACAGGGTTTACTCTGGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR GCA 72 bp CCTCGGCCTCTTGACTCAGGTCCCGGAGTAAGGGACTaGCCATCCCCCTTTCTTTTCCTGGACACTACACAG +
Preference number: 3 (lower is better)
Translates to: PRPLDSGPGVRD*PSPFLFLDTTQ
Trigger: CTGTGTAGTGTCCAGGAAAAGAAAGGGGGATGGGCAGTCCCTTACTCCGGGACCTGAGTCAAGAGGCCGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR CCA 72 bp CTCTGTGTCTGGGGTAGGTCCAGTGACCAGACCCAGTaGCTGGATTCTTGGTTACTGTTCGCAGGCAGTGGC +
Preference number: 3 (lower is better)
Translates to: LCVWGRSSDQTQ*LDSWLLFAGSG
Trigger: GCCACTGCCTGCGAACAGTAACCAAGAATCCAGCCACTGGGTCTGGTCACTGGACCTACCCCAGACACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR CCA 72 bp TCAGGTTTGGAGCCTCTCTCTCCTGCCTCCGAAAGATaGTCACGGACGGGACGTCTCTTCATTTCTCTCCGG +
Preference number: 3 (lower is better)
Translates to: SGLEPLSPASER*SRTGRLFISLR
Trigger: CCGGAGAGAAATGAAGAGACGTCCCGTCCGTGACCATCTTTCGGAGGCAGGAGAGAGAGGCTCCAAACCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR CCA 72 bp GTGTCTGGGGTAGGTCCAGTGACCAGACCCAGTGGCTaGATTCTTGGTTACTGTTCGCAGGCAGTGGCACTA +
Preference number: 3 (lower is better)
Translates to: VSGVGPVTRPSG*ILGYCSQAVAL
Trigger: TAGTGCCACTGCCTGCGAACAGTAACCAAGAATCCAGCCACTGGGTCTGGTCACTGGACCTACCCCAGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR CCA 72 bp GGAAAGCAAAGTGGTCCTAAGGAAGTTGGCAGTCACTaGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAA +
Preference number: 3 (lower is better)
Translates to: GKQSGPKEVGSH*VPCAPGKFCPK
Trigger: TTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTTCCTTAGGACCACTTTGCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR CCA 72 bp TCCAGCAGAACTCATTTTCCTGTGTCCTGGGTGCCATaGCACCAGGAAGCAGTGACTGATGGCATGGCCATA +
Preference number: 3 (lower is better)
Translates to: SSRTHFPVSWVP*HQEAVTDGMAI
Trigger: TATGGCCATGCCATCAGTCACTGCTTCCTGGTGCCATGGCACCCAGGACACAGGAAAATGAGTTCTGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR CCA 72 bp CACAAATGCTCCAGCAGAACTCATTTTCCTGTGTCCTaGGTGCCATGGCACCAGGAAGCAGTGACTGATGGC +
Preference number: 3 (lower is better)
Translates to: HKCSSRTHFPVS*VPWHQEAVTDG
Trigger: GCCATCAGTCACTGCTTCCTGGTGCCATGGCACCCAGGACACAGGAAAATGAGTTCTGCTGGAGCATTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR CCA 72 bp GGTAGGTCCAGTGACCAGACCCAGTGGCTGGATTCTTaGTTACTGTTCGCAGGCAGTGGCACTAGAGCTTTA +
Preference number: 3 (lower is better)
Translates to: GRSSDQTQWLDS*LLFAGSGTRAL
Trigger: TAAAGCTCTAGTGCCACTGCCTGCGAACAGTAACCAAGAATCCAGCCACTGGGTCTGGTCACTGGACCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR-3UTR CAA 90 bp TCTGGGGTAGGTCCAGTGACCAGACCCAGTGGCTGGATTCTTGGTTACTGTTCGGGGGGCGATTGCTTCTaGAGCAAGTTAGCTTATTTC +
Preference number: 3 (lower is better)
Translates to: SGVGPVTRPSGWILGYCSGGDCF*SKLAYF
Trigger: GAAATAAGCTAACTTGCTCAAGAAGCAATCGCCCCC...CGAACAGTAACCAAGAATCCAGCCACTGGGTCTGGTCACTGGACCTACCCCAGA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR TCA 72 bp GGCAAATGGAGAGGCATTTTCTTCTGCGGGCATCTATaGGGAGCAGTGCAGCAGCCAAGAGTACCTTCATCT +
Preference number: 3 (lower is better)
Translates to: GKWRGIFFCGHL*GAVQQPRVPSS
Trigger: AGATGAAGGTACTCTTGGCTGCTGCACTGCTCCTCATAGATGCCCGCAGAAGAAAATGCCTCTCCATTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR TCA 72 bp CTCTCAGATCACACGCTGTGGAAAGAAACTGGCTTCTaGTCGGAAAGCAAAGTGGTCCTAAGGAAGTTGGCA +
Preference number: 3 (lower is better)
Translates to: LSDHTLWKETGF*SESKVVLRKLA
Trigger: TGCCAACTTCCTTAGGACCACTTTGCTTTCCGATCAGAAGCCAGTTTCTTTCCACAGCGTGTGATCTGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR TCA 72 bp ACATCTGGAACCCAAATACAGACTCCACGTCTTCACTaGGAACCTACTGTGTGTGCACCAGTCTCTCAGATC +
Preference number: 3 (lower is better)
Translates to: TSGTQIQTPRLH*EPTVCAPVSQI
Trigger: GATCTGAGAGACTGGTGCACACACAGTAGGTTCTCAGTGAAGACGTGGAGTCTGTATTTGGGTTCCAGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR-3UTR CAA 90 bp AGCAAGTTAGCTTATTTCTTGGACATTCCAACACTCACCCACTTTTCCTACTTTACGCTTGCCTCAGGTTaGGAGCCTCTCTCTCCTGCC +
Preference number: 3 (lower is better)
Translates to: SKLAYFLDIPTLTHFSYFTLASG*EPLSPA
Trigger: GGCAGGAGAGAGAGGCTCCAAACCTGAGGCAAGCGT...AAAGTAGGAAAAGTGGGTGAGTGTTGGAATGTCCAAGAAATAAGCTAACTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR TCA 72 bp TGCAGCAGCCAAGAGTACCTTCATCTGCTGGATCAATaGGTCCTAAGATCAGGTGATAAATGTGCTTCACAG +
Preference number: 3 (lower is better)
Translates to: CSSQEYLHLLDQ*VLRSGDKCASQ
Trigger: CTGTGAAGCACATTTATCACCTGATCTTAGGACTCATTGATCCAGCAGATGAAGGTACTCTTGGCTGCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR CCA 72 bp CGGGTCCTGAAATCACACGTGAACACTGAACACCTTTaGTTCATTTCTATGCAAGACTTCAAGTGGCCAAGT +
Preference number: 3 (lower is better)
Translates to: RVLKSHVNTEHL*FISMQDFKWPS
Trigger: ACTTGGCCACTTGAAGTCTTGCATAGAAATGAACCAAAGGTGTTCAGTGTTCACGTGTGATTTCAGGACCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR TCA 72 bp TTACCACAGATAAAAATGTTTCTGCTCTTGAGAGTCTaGGAAGTCACTGAGACCACACTGCAGGAAGCAGGT +
Preference number: 3 (lower is better)
Translates to: LPQIKMFLLLRV*EVTETTLQEAG
Trigger: ACCTGCTTCCTGCAGTGTGGTCTCAGTGACTTCTCAGACTCTCAAGAGCAGAAACATTTTTATCTGTGGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR TCA 72 bp CTCCTAAATCCCAAAGGATCCTCTTTGAGGGATCCTTaGAGGAGAAACAGCAAGTTTGTTCTTCTCTGTGTC +
Preference number: 3 (lower is better)
Translates to: LLNPKGSSLRDP*RRNSKFVLLCV
Trigger: GACACAGAGAAGAACAAACTTGCTGTTTCTCCTTCAAGGATCCCTCAAAGAGGATCCTTTGGGATTTAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR-3UTR CAA 90 bp GTAAAAACAGTGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTGGAGAAACAGCAAGTTaGTTCTTCTCTGTGTCTGGG +
Preference number: 3 (lower is better)
Translates to: VKTVCIFLPIFSQEHEVIGETAS*FFSVSG
Trigger: CCCAGACACAGAGAAGAACAAACTTGCTGTTTCTCC...AATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACACTGTTTTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR TCA 72 bp TCTATGCAAGACTTCAAGTGGCCAAGTTTAACAAAATaGTATAACCAACTCGTGCTGACGGCTTTCTTGAAA +
Preference number: 3 (lower is better)
Translates to: SMQDFKWPSLTK*YNQLVLTAFLK
Trigger: TTTCAAGAAAGCCGTCAGCACGAGTTGGTTATATCATTTTGTTAAACTTGGCCACTTGAAGTCTTGCATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR-3UTR CAA 90 bp AGATATAATGTCACTTTTCAGGGAAATATACACGAGGAAGTTGCCATAGTACCAAAGTTAGCTTATTTCTaGGACATTCCAACACTCACC +
Preference number: 3 (lower is better)
Translates to: RYNVTFQGNIHEEVAIVPKLAYF*DIPTLT
Trigger: GGTGAGTGTTGGAATGTCCAAGAAATAAGCTAACTT...TGGTACTATGGCAACTTCCTCGTGTATATTTCCCTGAAAAGTGACATTATATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp AAGTTGGCAGTCACTGGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAATGGCACAGCAGGCCCCGGGTaGCTGGGGGACACGAACACT +
Preference number: 4 (lower is better)
Translates to: KLAVTGSPVPQASSVLNGTAGPG*LGDTNT
Trigger: AGTGTTCGTGTCCCCCAGGCACCCGGGGCCTGCTGT...GCCATTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp GGTCCCGGAGTAAGGGACTGCCCATCCCCCTTTCTTTTCCTGGACACTACACAGCCGAGGGGAGCACGGTaGTGGCTCCAGGAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: GPGVRDCPSPFLFLDTTQPRGAR*WLQEPK
Trigger: CTTTGGCTCCTGGAGCCAGCACCGTGCTCCCCTCGG...CTGTGTAGTGTCCAGGAAAAGAAAGGGGGATGGGCAGTCCCTTACTCCGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp TCTGGGGTAGGTCCAGTGACCAGACCCAGTGGCTGGATTCTTGGTTACTGTTCGAGGGTGGGCTCCCTCTaGAGGAGCCAGGACCATGCC +
Preference number: 4 (lower is better)
Translates to: SGVGPVTRPSGWILGYCSRVGSL*RSQDHA
Trigger: GGCATGGTCCTGGCTCCTGCAGAGGGAGCCCACCCT...CGAACAGTAACCAAGAATCCAGCCACTGGGTCTGGTCACTGGACCTACCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp AAGTTGGCAGTCACTGGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAATGGCTCTGGGGAGCTGCTATaGCAGGGTGGGCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: KLAVTGSPVPQASSVLNGSGELL*QGGLPL
Trigger: CAGAGGGAGCCCACCCTGGCATAGCAGCTCCCCAGA...GCCATTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp GGTCCCGGAGTAAGGGACTGCCCATCCCCCTTTCTTTTCCTGGACACTACACAGCAGGAGGGGTGCTGGTaGGGGCTGTGTAGAGTTCGC +
Preference number: 4 (lower is better)
Translates to: GPGVRDCPSPFLFLDTTQQEGCW*GLCRVR
Trigger: GCGAACTCTACACAGCCCCCACCAGCACCCCTCCTG...CTGTGTAGTGTCCAGGAAAAGAAAGGGGGATGGGCAGTCCCTTACTCCGGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR CAA 72 bp GAGAGCGAGGGAAGATGGAGAGAAGGCTTCTCACGCTaGCCTCAGGTTTGGAGCCTCTCTCTCCTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: ESEGRWREGFSR*PQVWSLSLLPP
Trigger: CGGAGGCAGGAGAGAGAGGCTCCAAACCTGAGGCAAGCGTGAGAAGCCTTCTCTCCATCTTCCCTCGCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp GGTCCCGGAGTAAGGGACTGCCCATCCCCCTTTCTTTTCCTGGACACTACACAGCACACGTGCCGCCATTaGAGCAGGAGCTCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: GPGVRDCPSPFLFLDTTQHTCRH*SRSSQC
Trigger: GCACTGAGAGCTCCTGCTTCAATGGCGGCACGTGTG...CTGTGTAGTGTCCAGGAAAAGAAAGGGGGATGGGCAGTCCCTTACTCCGGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp GGTCCCGGAGTAAGGGACTGCCCATCCCCCTTTCTTTTCCTGGACACTACACAGAGAGGGCAAGGGGCCTaGAACAGCTGGAGGGCAACT +
Preference number: 4 (lower is better)
Translates to: GPGVRDCPSPFLFLDTTQRGQGA*NSWRAT
Trigger: AGTTGCCCTCCAGCTGTTGCAGGCCCCTTGCCCTCT...CTGTGTAGTGTCCAGGAAAAGAAAGGGGGATGGGCAGTCCCTTACTCCGGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AAGTTGGCAGTCACTGGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAATGGCCAGGAGCCTCCGTTCTaGCAGGGGTTGGCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: KLAVTGSPVPQASSVLNGQEPPF*QGLARQ
Trigger: TTGCCTTGCCAACCCCTGCCAGAACGGAGGCTCCTG...GCCATTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AAGTTGGCAGTCACTGGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAATGGCTCCTCCTGCTGCCCTTaGCATCCTTGGCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: KLAVTGSPVPQASSVLNGSSCCP*HPWPPW
Trigger: CCAAGGAGGCCAAGGATGCCAAGGGCAGCAGGAGGA...GCCATTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp AAGTTGGCAGTCACTGGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAATGGCTCCCACTGGCAGGCATaGCTATTGCAGGCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: KLAVTGSPVPQASSVLNGSHWQA*LLQASS
Trigger: TGACGAGGCCTGCAATAGTCATGCCTGCCAGTGGGA...GCCATTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp GGTCCCGGAGTAAGGGACTGCCCATCCCCCTTTCTTTTCCTGGACACTACACAGCACTCAGGTCTGAGCTaGCTCCTCGGAGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: GPGVRDCPSPFLFLDTTQHSGLS*LLGEKP
Trigger: TGGCTTCTCTCCGAGGAGGCAGCTCAGACCTGAGTG...CTGTGTAGTGTCCAGGAAAAGAAAGGGGGATGGGCAGTCCCTTACTCCGGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp AAGTTGGCAGTCACTGGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAATGGCCGAACGATGTCATGGTaGATGCGGTCCCGAGCCACA +
Preference number: 4 (lower is better)
Translates to: KLAVTGSPVPQASSVLNGRTMSW*MRSRAT
Trigger: TGTGGCTCGGGACCGCATGCACCATGACATCGTTCG...GCCATTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp GGAGACTGTCCCTTCTCCACATCTGGAACCCAAATACAGACTCCACGTCTTCACCCTGGGGGCGCGATGTaGTGGTGGGATAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GDCPFSTSGTQIQTPRLHPGGAM*WWDSSW
Trigger: CCAGCTGCTATCCCACCACCACATCGCGCCCCCAGG...GTGAAGACGTGGAGTCTGTATTTGGGTTCCAGATGTGGAGAAGGGACAGTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp CAGAGAGCGAGGGAAGATGGAGAGAAGGCTTCTCACGCTTGCCTCAGGTTTGGACAGGTGCCTCCATTCTaGCAAGCGTTGGGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: QRAREDGEKASHACLRFGQVPPF*QALGCN
Trigger: GTTGCAGCCCAACGCTTGTCAGAATGGAGGCACCTG...TCCAAACCTGAGGCAAGCGTGAGAAGCCTTCTCTCCATCTTCCCTCGCTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp TGGAACCCAAATACAGACTCCACGTCTTCACTGAGAACCTACTGTGTGTGCACCAGTCTCGGCGGAGGGTaGACCCTTCCGGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: WNPNTDSTSSLRTYCVCTSLGGG*TLPAAR
Trigger: TCTGGCTGCCGGAAGGGTTCACCCTCCGCCGAGACT...GGTGCACACACAGTAGGTTCTCAGTGAAGACGTGGAGTCTGTATTTGGGTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp GGTCCCGGAGTAAGGGACTGCCCATCCCCCTTTCTTTTCCTGGACACTACACAGGGTTCACAAGGTCGATaGAGGTGCCTCCATTCTGGC +
Preference number: 4 (lower is better)
Translates to: GPGVRDCPSPFLFLDTTQGSQGR*RCLHSG
Trigger: GCCAGAATGGAGGCACCTGCATCGACCTTGTGAACC...CTGTGTAGTGTCCAGGAAAAGAAAGGGGGATGGGCAGTCCCTTACTCCGGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp TCTGGGGTAGGTCCAGTGACCAGACCCAGTGGCTGGATTCTTGGTTACTGTTCGAAGCTTCGCGAATCCTaGAGCAGCTGTTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SGVGPVTRPSGWILGYCSKLRES*SSCSGG
Trigger: GCCCCCTGAACAGCTGCTGCAGGATTCGCGAAGCTT...CGAACAGTAACCAAGAATCCAGCCACTGGGTCTGGTCACTGGACCTACCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp CAGAGAGCGAGGGAAGATGGAGAGAAGGCTTCTCACGCTTGCCTCAGGTTTGGAGTCCACCTCCTGTTCTaGCTGAGGAGGAGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: QRAREDGEKASHACLRFGVHLLF*LRRSEC
Trigger: GCACTCACTCCTCCTCAGGCAGAACAGGAGGTGGAC...TCCAAACCTGAGGCAAGCGTGAGAAGCCTTCTCTCCATCTTCCCTCGCTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AAGTTGGCAGTCACTGGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAATGGCCAGGCATCATCCAGATaGCACAGGAGACCCGCCTTT +
Preference number: 4 (lower is better)
Translates to: KLAVTGSPVPQASSVLNGQASSR*HRRPAF
Trigger: AAAGGCGGGTCTCCTGTGCCATCTGGATGATGCCTG...GCCATTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp CAGAGAGCGAGGGAAGATGGAGAGAAGGCTTCTCACGCTTGCCTCAGGTTTGGACTGACTCGCAGTCCTTaGGGTTCAGGCAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: QRAREDGEKASHACLRFGLTRSP*GSGRSS
Trigger: GCTGCTTCTGCCTGAACCCCAAGGACTGCGAGTCAG...TCCAAACCTGAGGCAAGCGTGAGAAGCCTTCTCTCCATCTTCCCTCGCTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp CACATCCCTCCTCCTAAATCCCAAAGGATCCTCTTTGAGGGATCCTTGAAGGAGGCTGCTATGCCAGGGTaGGCTCCCTCTGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: HIPPPKSQRILFEGSLKEAAMPG*APSAGA
Trigger: GGCTCCTGCAGAGGGAGCCCACCCTGGCATAGCAGC...CTCCTTCAAGGATCCCTCAAAGAGGATCCTTTGGGATTTAGGAGGAGGGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp GGAGACTGTCCCTTCTCCACATCTGGAACCCAAATACAGACTCCACGTCTTCACGGCAAGGGCTCCCGCTaGGTGGACATGTGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: GDCPFSTSGTQIQTPRLHGKGSR*VDMCFP
Trigger: AGGGAAGCACATGTCCACCCAGCGGGAGCCCTTGCC...GTGAAGACGTGGAGTCTGTATTTGGGTTCCAGATGTGGAGAAGGGACAGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp GGAGACTGTCCCTTCTCCACATCTGGAACCCAAATACAGACTCCACGTCTTCACACCTGCCCCTCCTGCTaGGGCATCATGGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GDCPFSTSGTQIQTPRLHTCPSC*GIMVGG
Trigger: CCCACCTACCATGATGCCCCAGCAGGAGGGGCAGGT...GTGAAGACGTGGAGTCTGTATTTGGGTTCCAGATGTGGAGAAGGGACAGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp CAGAGAGCGAGGGAAGATGGAGAGAAGGCTTCTCACGCTTGCCTCAGGTTTGGACAGGCATCTGTCCACTaGCACTGCTTCCCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: QRAREDGEKASHACLRFGQASVH*HCFPVK
Trigger: CTTCACAGGGAAGCAGTGTCAGTGGACAGATGCCTG...TCCAAACCTGAGGCAAGCGTGAGAAGCCTTCTCTCCATCTTCCCTCGCTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp TCTGGGGTAGGTCCAGTGACCAGACCCAGTGGCTGGATTCTTGGTTACTGTTCGTCGCCTCCACATTATTaGCAGCAGCTGCCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: SGVGPVTRPSGWILGYCSSPPHY*QQLPSG
Trigger: TCCACTGGGCAGCTGCTGTCAATAATGTGGAGGCGA...CGAACAGTAACCAAGAATCCAGCCACTGGGTCTGGTCACTGGACCTACCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp GGTCCCGGAGTAAGGGACTGCCCATCCCCCTTTCTTTTCCTGGACACTACACAGAGATTCCAGGGGATGTaGTCATGGGAGAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: GPGVRDCPSPFLFLDTTQRFQGM*SWERMW
Trigger: CCACATCCTCTCCCATGATCACATCCCCTGGAATCT...CTGTGTAGTGTCCAGGAAAAGAAAGGGGGATGGGCAGTCCCTTACTCCGGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp TCTGGGGTAGGTCCAGTGACCAGACCCAGTGGCTGGATTCTTGGTTACTGTTCGGCTGGTGGTCACATCTaGCCAGTCAGATGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SGVGPVTRPSGWILGYCSAGGHI*PVRCRV
Trigger: CACTCTGCATCTGACTGGTCAGATGTGACCACCAGC...CGAACAGTAACCAAGAATCCAGCCACTGGGTCTGGTCACTGGACCTACCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp GGTCCCGGAGTAAGGGACTGCCCATCCCCCTTTCTTTTCCTGGACACTACACAGCATTCACCAGGTCAATaGAGCGCCCATCGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: GPGVRDCPSPFLFLDTTQHSPGQ*SAHRSS
Trigger: GCTTGAACGATGGGCGCTGCATTGACCTGGTGAATG...CTGTGTAGTGTCCAGGAAAAGAAAGGGGGATGGGCAGTCCCTTACTCCGGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp AAGTTGGCAGTCACTGGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAATGGCGACACCAACCCAGCCTaGATCGCAGAGGCACTTATA +
Preference number: 4 (lower is better)
Translates to: KLAVTGSPVPQASSVLNGDTNPA*IAEALI
Trigger: TATAAGTGCCTCTGCGATGCAGGCTGGGTTGGTGTC...GCCATTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp CAGAGAGCGAGGGAAGATGGAGAGAAGGCTTCTCACGCTTGCCTCAGGTTTGGAGGCACTCTGCGGTGTTaGACTGCTCATCACACTGGT +
Preference number: 4 (lower is better)
Translates to: QRAREDGEKASHACLRFGGTLRC*TAHHTG
Trigger: ACCAGTGTGATGAGCAGTGCAACACCGCAGAGTGCC...TCCAAACCTGAGGCAAGCGTGAGAAGCCTTCTCTCCATCTTCCCTCGCTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp TCTGGGGTAGGTCCAGTGACCAGACCCAGTGGCTGGATTCTTGGTTACTGTTCGATCACCTCCTGCTCCTaGTCCTGCTCCTCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SGVGPVTRPSGWILGYCSITSCS*SCSSGR
Trigger: TCTTCCTGAGGAGCAGGAGCAGGAGCAGGAGGTGAT...CGAACAGTAACCAAGAATCCAGCCACTGGGTCTGGTCACTGGACCTACCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATGGCTCGTGGGCATGGTaGTCTTGGTGTTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDGSWAW*SWCWAA
Trigger: GGCGGCCCAACACCAAGAGCACCATGCCCACGAGCC...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATGGAGGGCAACTGGACTaGGTCTGGGGAGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDGGQLD*VWGAPA
Trigger: AGCCGGAGCTCCCCAGACGCAGTCCAGTTGCCCTCC...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp GGTCCCGGAGTAAGGGACTGCCCATCCCCCTTTCTTTTCCTGGACACTACACAGTCTGGTCACTACAGATaGCTCCCATGTACCCAGGGT +
Preference number: 4 (lower is better)
Translates to: GPGVRDCPSPFLFLDTTQSGHYR*LPCTQG
Trigger: ACCCTGGGTACATGGGAGCCATCTGTAGTGACCAGA...CTGTGTAGTGTCCAGGAAAAGAAAGGGGGATGGGCAGTCCCTTACTCCGGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AAGTTGGCAGTCACTGGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAATGGCCCAGTACAGTTTCCGTaGATGCAGGGATTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: KLAVTGSPVPQASSVLNGPVQFP*MQGLLR
Trigger: CCTGAGCAATCCCTGCATCCACGGAAACTGTACTGG...GCCATTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp CAGAGAGCGAGGGAAGATGGAGAGAAGGCTTCTCACGCTTGCCTCAGGTTTGGAGGCACCGTGCTGGCATaGATTGGATGCACACTCATC +
Preference number: 4 (lower is better)
Translates to: QRAREDGEKASHACLRFGGTVLA*IGCTLI
Trigger: GATGAGTGTGCATCCAATCCATGCCAGCACGGTGCC...TCCAAACCTGAGGCAAGCGTGAGAAGCCTTCTCTCCATCTTCCCTCGCTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp CACATCCCTCCTCCTAAATCCCAAAGGATCCTCTTTGAGGGATCCTTGAAGGAGCCCAGCAGCGAAGAGTaGAGGTGCAGTTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HIPPPKSQRILFEGSLKEPSSEE*RCSWPR
Trigger: CCTGGGCCAACTGCACCTCCACTCTTCGCTGCTGGG...CTCCTTCAAGGATCCCTCAAAGAGGATCCTTTGGGATTTAGGAGGAGGGATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AACCTACTGTGTGTGCACCAGTCTCTCAGATCACACGCTGTGGAAAGAAACTGGATGCGCAAGTTGGTGTaGAGCAGGGTGCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: NLLCVHQSLRSHAVERNWMRKLV*SRVPRA
Trigger: GGCCCTGGGCACCCTGCTCCACACCAACTTGCGCAT...CCAGTTTCTTTCCACAGCGTGTGATCTGAGAGACTGGTGCACACACAGTAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp TGGAACCCAAATACAGACTCCACGTCTTCACTGAGAACCTACTGTGTGTGCACCAGGGCTCCCGCTGGGTaGACATGTGCTTCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: WNPNTDSTSSLRTYCVCTRAPAG*TCASLP
Trigger: CGGAAGGGAAGCACATGTCCACCCAGCGGGAGCCCT...GGTGCACACACAGTAGGTTCTCAGTGAAGACGTGGAGTCTGTATTTGGGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp CAGAGAGCGAGGGAAGATGGAGAGAAGGCTTCTCACGCTTGCCTCAGGTTTGGAGGCATCTCTGGGATCTaGTACATAGAGGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: QRAREDGEKASHACLRFGGISGI*YIEGKG
Trigger: CCCCTTGCCCTCTATGTACCAGATCCCAGAGATGCC...TCCAAACCTGAGGCAAGCGTGAGAAGCCTTCTCTCCATCTTCCCTCGCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp GGTCCCGGAGTAAGGGACTGCCCATCCCCCTTTCTTTTCCTGGACACTACACAGCAAACGGGGCATCTCTaGGATCTGGTACATAGAGGG +
Preference number: 4 (lower is better)
Translates to: GPGVRDCPSPFLFLDTTQQTGHL*DLVHRG
Trigger: CCCTCTATGTACCAGATCCCAGAGATGCCCCGTTTG...CTGTGTAGTGTCCAGGAAAAGAAAGGGGGATGGGCAGTCCCTTACTCCGGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AAGTTGGCAGTCACTGGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAATGGCCTTGCCCACAGAGGCTaGGAAAGGATGATAGGTTGG +
Preference number: 4 (lower is better)
Translates to: KLAVTGSPVPQASSVLNGLAHRG*ERMIGW
Trigger: CCAACCTATCATCCTTTCCCAGCCTCTGTGGGCAAG...GCCATTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp ACATGCAGGGGAGAGAAATTAAGGTGCAGGTTCAGAAGGAGGCTTCTAGTCCCCGTTGGGAAGGGGGTGTaGGGTACTTGCCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: TCRGEKLRCRFRRRLLVPVGKGV*GTCPQR
Trigger: CCTCTGTGGGCAAGTACCCCACACCCCCTTCCCAAC...GGGGACTAGAAGCCTCCTTCTGAACCTGCACCTTAATTTCTCTCCCCTGCATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp CAGAGAGCGAGGGAAGATGGAGAGAAGGCTTCTCACGCTTGCCTCAGGTTTGGACTCCAGGAGTTGGGCTaGTGGTCACATCTGACCAGT +
Preference number: 4 (lower is better)
Translates to: QRAREDGEKASHACLRFGLQELG*WSHLTS
Trigger: ACTGGTCAGATGTGACCACCAGCCCAACTCCTGGAG...TCCAAACCTGAGGCAAGCGTGAGAAGCCTTCTCTCCATCTTCCCTCGCTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp CACATCCCTCCTCCTAAATCCCAAAGGATCCTCTTTGAGGGATCCTTGAAGGAGCTCACAGCGAGGCCCTaGGTAGCCCTTCAGACACTC +
Preference number: 4 (lower is better)
Translates to: HIPPPKSQRILFEGSLKELTARP*VALQTL
Trigger: GAGTGTCTGAAGGGCTACGCAGGGCCTCGCTGTGAG...CTCCTTCAAGGATCCCTCAAAGAGGATCCTTTGGGATTTAGGAGGAGGGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp TCTGGGGTAGGTCCAGTGACCAGACCCAGTGGCTGGATTCTTGGTTACTGTTCGACTTTGTCCACACACTaGCCGTTGTTCACACACGGG +
Preference number: 4 (lower is better)
Translates to: SGVGPVTRPSGWILGYCSTLSTH*PLFTHG
Trigger: CCCGTGTGTGAACAACGGGCAGTGTGTGGACAAAGT...CGAACAGTAACCAAGAATCCAGCCACTGGGTCTGGTCACTGGACCTACCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp AAGTTGGCAGTCACTGGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAATGGCCTGTGTAAGGCAACATaGAGTGGCAAGTGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: KLAVTGSPVPQASSVLNGLCKAT*SGKCSH
Trigger: GTGGCTACACTTGCCACTGCATGTTGCCTTACACAG...GCCATTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp CAGAGAGCGAGGGAAGATGGAGAGAAGGCTTCTCACGCTTGCCTCAGGTTTGGAACTCACACACGTAGCTaGCCTGAGTGTTGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: QRAREDGEKASHACLRFGTHTRS*PECCGR
Trigger: TCTGCCACAACACTCAGGGCAGCTACGTGTGTGAGT...TCCAAACCTGAGGCAAGCGTGAGAAGCCTTCTCTCCATCTTCCCTCGCTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp TGGAACCCAAATACAGACTCCACGTCTTCACTGAGAACCTACTGTGTGTGCACCGATCAGGGTGCCCTCTaGCAGGTTCTCAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: WNPNTDSTSSLRTYCVCTDQGAL*QVLRLV
Trigger: GACCAGCCTGAGAACCTGGCAGAGGGCACCCTGATC...GGTGCACACACAGTAGGTTCTCAGTGAAGACGTGGAGTCTGTATTTGGGTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp TGGAACCCAAATACAGACTCCACGTCTTCACTGAGAACCTACTGTGTGTGCACCGCAGCTTCAAGGTGCTaGTGTGTCCAGGGCCGTCGA +
Preference number: 4 (lower is better)
Translates to: WNPNTDSTSSLRTYCVCTAASRC*CVQGRR
Trigger: TCGACGGCCCTGGACACAGCAGCACCTTGAAGCTGC...GGTGCACACACAGTAGGTTCTCAGTGAAGACGTGGAGTCTGTATTTGGGTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp ACATGCAGGGGAGAGAAATTAAGGTGCAGGTTCAGAAGGAGGCTTCTAGTCCCCGGGCCATCTCGCCAGTaGGGTCTGTCTGTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: TCRGEKLRCRFRRRLLVPGPSRQ*GLSVLE
Trigger: TTCAAGCACAGACAGACCGCACTGGCGAGATGGCCC...GGGGACTAGAAGCCTCCTTCTGAACCTGCACCTTAATTTCTCTCCCCTGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATTCTGCTCTGGGGAGCTaGTATGCCAGGGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDSALGS*YARVGS
Trigger: GGAGCCCACCCTGGCATAGCAGCTCCCCAGAGCAGA...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AAGTTGGCAGTCACTGGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAATGGCTCAGGCAGGGAGTACTaGAGCAGTCATCAATGTCGA +
Preference number: 4 (lower is better)
Translates to: KLAVTGSPVPQASSVLNGSGREY*SSHQCR
Trigger: TCGACATTGATGACTGCTCCAGTACTCCCTGCCTGA...GCCATTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AACCTACTGTGTGTGCACCAGTCTCTCAGATCACACGCTGTGGAAAGAAACTGGTCACAGTGGACTCCGTaGAAGCCCGCAGGGCATGTG +
Preference number: 4 (lower is better)
Translates to: NLLCVHQSLRSHAVERNWSQWTP*KPAGHV
Trigger: CACATGCCCTGCGGGCTTCCACGGAGTCCACTGTGA...CCAGTTTCTTTCCACAGCGTGTGATCTGAGAGACTGGTGCACACACAGTAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp TCTGGGGTAGGTCCAGTGACCAGACCCAGTGGCTGGATTCTTGGTTACTGTTCGTGGCAGGGTTGGTTCTaGCACTCGTCCACTTCATAC +
Preference number: 4 (lower is better)
Translates to: SGVGPVTRPSGWILGYCSWQGWF*HSSTSY
Trigger: GTATGAAGTGGACGAGTGCCAGAACCAACCCTGCCA...CGAACAGTAACCAAGAATCCAGCCACTGGGTCTGGTCACTGGACCTACCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp GGAGACTGTCCCTTCTCCACATCTGGAACCCAAATACAGACTCCACGTCTTCACTGTCCACAGCTGCTCTaGCATCTCGCCCCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: GDCPFSTSGTQIQTPRLHCPQLL*HLAPEN
Trigger: GTTCTCTGGGGCGAGATGCCAGAGCAGCTGTGGACA...GTGAAGACGTGGAGTCTGTATTTGGGTTCCAGATGTGGAGAAGGGACAGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp ACATGCAGGGGAGAGAAATTAAGGTGCAGGTTCAGAAGGAGGCTTCTAGTCCCCGCTGGCAGGGGTTACTaGCACATCCTGACTCGCAGT +
Preference number: 4 (lower is better)
Translates to: TCRGEKLRCRFRRRLLVPAGRGY*HILTRS
Trigger: ACTGCGAGTCAGGATGTGCCAGTAACCCCTGCCAGC...GGGGACTAGAAGCCTCCTTCTGAACCTGCACCTTAATTTCTCTCCCCTGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AACCTACTGTGTGTGCACCAGTCTCTCAGATCACACGCTGTGGAAAGAAACTGGCAGGTGCCCCCATGCTaGCAGGGGTTACTGGCACAT +
Preference number: 4 (lower is better)
Translates to: NLLCVHQSLRSHAVERNWQVPPC*QGLLAH
Trigger: ATGTGCCAGTAACCCCTGCCAGCATGGGGGCACCTG...CCAGTTTCTTTCCACAGCGTGTGATCTGAGAGACTGGTGCACACACAGTAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp GGAGACTGTCCCTTCTCCACATCTGGAACCCAAATACAGACTCCACGTCTTCACCGGCCCATGTTGTCCTaGGCATTTGCATCCGCACCA +
Preference number: 4 (lower is better)
Translates to: GDCPFSTSGTQIQTPRLHRPMLS*AFASAP
Trigger: TGGTGCGGATGCAAATGCCCAGGACAACATGGGCCG...GTGAAGACGTGGAGTCTGTATTTGGGTTCCAGATGTGGAGAAGGGACAGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp GGAGACTGTCCCTTCTCCACATCTGGAACCCAAATACAGACTCCACGTCTTCACGGAAGGCGGTCCATGTaGTCAGTGATGTCCCGGTTG +
Preference number: 4 (lower is better)
Translates to: GDCPFSTSGTQIQTPRLHGRRSM*SVMSRL
Trigger: CAACCGGGACATCACTGACCACATGGACCGCCTTCC...GTGAAGACGTGGAGTCTGTATTTGGGTTCCAGATGTGGAGAAGGGACAGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AAGTTGGCAGTCACTGGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAATGGCAGCCTTCTTACCCATTaGGGTGTGCTTCAGACTGAG +
Preference number: 4 (lower is better)
Translates to: KLAVTGSPVPQASSVLNGSLLTH*GVLQTE
Trigger: CTCAGTCTGAAGCACACCCCAATGGGTAAGAAGGCT...GCCATTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp CACATCCCTCCTCCTAAATCCCAAAGGATCCTCTTTGAGGGATCCTTGAAGGAGGCTGGAAAGTCACGATaGGAGGCAAGGGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: HIPPPKSQRILFEGSLKEAGKSR*EARAPA
Trigger: AGCGGGAGCCCTTGCCTCCCATCGTGACTTTCCAGC...CTCCTTCAAGGATCCCTCAAAGAGGATCCTTTGGGATTTAGGAGGAGGGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATGGAGCTCCGGCTGCCTaGGCAATGCTGCCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDGAPAA*AMLPFG
Trigger: CCCAAAAGGCAGCATTGCCCAGGCAGCCGGAGCTCC...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp CAGAGAGCGAGGGAAGATGGAGAGAAGGCTTCTCACGCTTGCCTCAGGTTTGGATTGGTCAGGAGACTCTaGGGATGGTGTCAGGTATGG +
Preference number: 4 (lower is better)
Translates to: QRAREDGEKASHACLRFGLVRRL*GWCQVW
Trigger: CCATACCTGACACCATCCCCAGAGTCTCCTGACCAA...TCCAAACCTGAGGCAAGCGTGAGAAGCCTTCTCTCCATCTTCCCTCGCTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATGGCACTTGTCCCCTATaGAGCCAGGATGGCACTGGC +
Preference number: 4 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDGTCPL*SQDGTG
Trigger: GCCAGTGCCATCCTGGCTTCATAGGGGACAAGTGCC...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp GGAGACTGTCCCTTCTCCACATCTGGAACCCAAATACAGACTCCACGTCTTCACGGGTGTTGCCAGCATTaGTACAGATGCCCGAGTGCT +
Preference number: 4 (lower is better)
Translates to: GDCPFSTSGTQIQTPRLHGCCQH*YRCPSA
Trigger: AGCACTCGGGCATCTGTATCAATGCTGGCAACACCC...GTGAAGACGTGGAGTCTGTATTTGGGTTCCAGATGTGGAGAAGGGACAGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp AACCTACTGTGTGTGCACCAGTCTCTCAGATCACACGCTGTGGAAAGAAACTGGTGGACAGGCATTCGTTaGTGTCCCCCTCACACCGCT +
Preference number: 4 (lower is better)
Translates to: NLLCVHQSLRSHAVERNWWTGIR*CPPHTA
Trigger: AGCGGTGTGAGGGGGACATCAACGAATGCCTGTCCA...CCAGTTTCTTTCCACAGCGTGTGATCTGAGAGACTGGTGCACACACAGTAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp TGGAACCCAAATACAGACTCCACGTCTTCACTGAGAACCTACTGTGTGTGCACCGGGTGTGCTTCAGACTaGGGAAAGACCTGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: WNPNTDSTSSLRTYCVCTGCASD*GKTCWA
Trigger: GGCCCAACAGGTCTTTCCTCAGTCTGAAGCACACCC...GGTGCACACACAGTAGGTTCTCAGTGAAGACGTGGAGTCTGTATTTGGGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp ACATGCAGGGGAGAGAAATTAAGGTGCAGGTTCAGAAGGAGGCTTCTAGTCCCCAGCCCAAGGGACAGATaGATCGGTAGGTACCCAGAC +
Preference number: 4 (lower is better)
Translates to: TCRGEKLRCRFRRRLLVPSPRDR*IGRYPD
Trigger: GTCTGGGTACCTACCGATGCATCTGTCCCTTGGGCT...GGGGACTAGAAGCCTCCTTCTGAACCTGCACCTTAATTTCTCTCCCCTGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp AACCTACTGTGTGTGCACCAGTCTCTCAGATCACACGCTGTGGAAAGAAACTGGTCTGCAGCTTCAAGGTaGTGCTGTGTCCAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: NLLCVHQSLRSHAVERNWSAASR*CCVQGR
Trigger: ACGGCCCTGGACACAGCAGCACCTTGAAGCTGCAGA...CCAGTTTCTTTCCACAGCGTGTGATCTGAGAGACTGGTGCACACACAGTAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATCGATGTCATGGTGCATaGGGTCCCGAGCCACATCCC +
Preference number: 4 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDRCHGA*GPEPHP
Trigger: GGGATGTGGCTCGGGACCGCATGCACCATGACATCG...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp AAGTTGGCAGTCACTGGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAATGGCTTACCCATTGGGGTGTaGTTCAGACTGAGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: KLAVTGSPVPQASSVLNGLPIGV*FRLRKD
Trigger: GTCTTTCCTCAGTCTGAAGCACACCCCAATGGGTAA...GCCATTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp TGGAACCCAAATACAGACTCCACGTCTTCACTGAGAACCTACTGTGTGTGCACCAATGCAGGTGGACCCTaGCGTGCAGGAAGCATAGGC +
Preference number: 4 (lower is better)
Translates to: WNPNTDSTSSLRTYCVCTNAGGP*RAGSIG
Trigger: GCCTATGCTTCCTGCACGCCAGGGTCCACCTGCATT...GGTGCACACACAGTAGGTTCTCAGTGAAGACGTGGAGTCTGTATTTGGGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp GGTCCCGGAGTAAGGGACTGCCCATCCCCCTTTCTTTTCCTGGACACTACACAGTTCAGACACTCACAGTaGAAGGCGCCATCTGTATTC +
Preference number: 4 (lower is better)
Translates to: GPGVRDCPSPFLFLDTTQFRHSQ*KAPSVF
Trigger: GAATACAGATGGCGCCTTCCACTGTGAGTGTCTGAA...CTGTGTAGTGTCCAGGAAAAGAAAGGGGGATGGGCAGTCCCTTACTCCGGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp ACATGCAGGGGAGAGAAATTAAGGTGCAGGTTCAGAAGGAGGCTTCTAGTCCCCATCCCATCCTGGCACTaGCCATGGTGGCAAGGATCT +
Preference number: 4 (lower is better)
Translates to: TCRGEKLRCRFRRRLLVPIPSWH*PWWQGS
Trigger: AGATCCTTGCCACCATGGCCAGTGCCAGGATGGGAT...GGGGACTAGAAGCCTCCTTCTGAACCTGCACCTTAATTTCTCTCCCCTGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp TCTGGGGTAGGTCCAGTGACCAGACCCAGTGGCTGGATTCTTGGTTACTGTTCGAAGCCAGGATGGCACTaGCAGGAGAAGGTATTCACA +
Preference number: 4 (lower is better)
Translates to: SGVGPVTRPSGWILGYCSKPGWH*QEKVFT
Trigger: TGTGAATACCTTCTCCTGCCAGTGCCATCCTGGCTT...CGAACAGTAACCAAGAATCCAGCCACTGGGTCTGGTCACTGGACCTACCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp CAGAGAGCGAGGGAAGATGGAGAGAAGGCTTCTCACGCTTGCCTCAGGTTTGGATTCAGGCAAGGCTTCTaGGGACACACATCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: QRAREDGEKASHACLRFGFRQGF*GHTSRK
Trigger: CTTCCTAGATGTGTGTCCCCAGAAGCCTTGCCTGAA...TCCAAACCTGAGGCAAGCGTGAGAAGCCTTCTCTCCATCTTCCCTCGCTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AAGTTGGCAGTCACTGGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAATGGCTTGGCTTTCTTTGGCTaGGGTCCTTCATCATCAACC +
Preference number: 4 (lower is better)
Translates to: KLAVTGSPVPQASSVLNGLAFFG*GPSSST
Trigger: GGTTGATGATGAAGGACCCCAGCCAAAGAAAGCCAA...GCCATTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp CACATCCCTCCTCCTAAATCCCAAAGGATCCTCTTTGAGGGATCCTTGAAGGAGAGGGCCGTCGATCGATaGGGTCATCTTCCGACAGCA +
Preference number: 4 (lower is better)
Translates to: HIPPPKSQRILFEGSLKERAVDR*GHLPTA
Trigger: TGCTGTCGGAAGATGACCCCATCGATCGACGGCCCT...CTCCTTCAAGGATCCCTCAAAGAGGATCCTTTGGGATTTAGGAGGAGGGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AACCTACTGTGTGTGCACCAGTCTCTCAGATCACACGCTGTGGAAAGAAACTGGGCCAGGGATGGAGTGTaGCGGATGTCTGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: NLLCVHQSLRSHAVERNWARDGV*RMSAAS
Trigger: TGAAGCTGCAGACATCCGCCACACTCCATCCCTGGC...CCAGTTTCTTTCCACAGCGTGTGATCTGAGAGACTGGTGCACACACAGTAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp CACATCCCTCCTCCTAAATCCCAAAGGATCCTCTTTGAGGGATCCTTGAAGGAGAGTGAGTGCCAGGGATaGAGTGTGGCGGATGTCTGC +
Preference number: 4 (lower is better)
Translates to: HIPPPKSQRILFEGSLKESECQG*SVADVC
Trigger: GCAGACATCCGCCACACTCCATCCCTGGCACTCACT...CTCCTTCAAGGATCCCTCAAAGAGGATCCTTTGGGATTTAGGAGGAGGGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp TCTGGGGTAGGTCCAGTGACCAGACCCAGTGGCTGGATTCTTGGTTACTGTTCGTCATGGGAGAGGATGTaGCATCGGAGACATACGTGT +
Preference number: 4 (lower is better)
Translates to: SGVGPVTRPSGWILGYCSSWERM*HRRHTC
Trigger: ACACGTATGTCTCCGATGCCACATCCTCTCCCATGA...CGAACAGTAACCAAGAATCCAGCCACTGGGTCTGGTCACTGGACCTACCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AACCTACTGTGTGTGCACCAGTCTCTCAGATCACACGCTGTGGAAAGAAACTGGGTGGGAAAGCCACACTaGGCAAACGGGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: NLLCVHQSLRSHAVERNWVGKPH*ANGASL
Trigger: CAGAGATGCCCCGTTTGCCCAGTGTGGCTTTCCCAC...CCAGTTTCTTTCCACAGCGTGTGATCTGAGAGACTGGTGCACACACAGTAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp TCTGGGGTAGGTCCAGTGACCAGACCCAGTGGCTGGATTCTTGGTTACTGTTCGTGTGACAAGGGTTGCTaGTACAGGCATCATCCAGAT +
Preference number: 4 (lower is better)
Translates to: SGVGPVTRPSGWILGYCSCDKGC*YRHHPD
Trigger: ATCTGGATGATGCCTGTATCAGCAACCCTTGTCACA...CGAACAGTAACCAAGAATCCAGCCACTGGGTCTGGTCACTGGACCTACCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp ACATGCAGGGGAGAGAAATTAAGGTGCAGGTTCAGAAGGAGGCTTCTAGTCCCCGCACTCGTTCACCTGTaGGTAGCAGCTAGGATGATG +
Preference number: 4 (lower is better)
Translates to: TCRGEKLRCRFRRRLLVPALVHL*VAARMM
Trigger: CATCATCCTAGCTGCTACTCACAGGTGAACGAGTGC...GGGGACTAGAAGCCTCCTTCTGAACCTGCACCTTAATTTCTCTCCCCTGCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp ACATGCAGGGGAGAGAAATTAAGGTGCAGGTTCAGAAGGAGGCTTCTAGTCCCCTGCAGGTGTAACTGTTaGCATAGTCGGAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: TCRGEKLRCRFRRRLLVPCRCNC*HSRSRS
Trigger: GGACCTGCTCCGACTATGTCAACAGTTACACCTGCA...GGGGACTAGAAGCCTCCTTCTGAACCTGCACCTTAATTTCTCTCCCCTGCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp TCTGGGGTAGGTCCAGTGACCAGACCCAGTGGCTGGATTCTTGGTTACTGTTCGTCACAGTTGACACCCTaGTATCCTGGAACACACTCA +
Preference number: 4 (lower is better)
Translates to: SGVGPVTRPSGWILGYCSSQLTP*YPGTHS
Trigger: TGAGTGTGTTCCAGGATATCAGGGTGTCAACTGTGA...CGAACAGTAACCAAGAATCCAGCCACTGGGTCTGGTCACTGGACCTACCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp AAGTTGGCAGTCACTGGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAATGGCTTTGAAGCACTGGTCTaGATCTTGAACACACTGTCG +
Preference number: 4 (lower is better)
Translates to: KLAVTGSPVPQASSVLNGFEALV*ILNTLS
Trigger: CGACAGTGTGTTCAAGATTCAGACCAGTGCTTCAAA...GCCATTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATGTCCCTTGGATGGCATaGGAAGCCAGGAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDVPWMA*EARRAA
Trigger: AGCTGCTCTCCTGGCTTCTCATGCCATCCAAGGGAC...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp GGAGACTGTCCCTTCTCCACATCTGGAACCCAAATACAGACTCCACGTCTTCACGGTCCATGTGGTCAGTaGTGTCCCGGTTGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: GDCPFSTSGTQIQTPRLHGPCGQ*CPGWQN
Trigger: ATTTTGCCAACCGGGACATCACTGACCACATGGACC...GTGAAGACGTGGAGTCTGTATTTGGGTTCCAGATGTGGAGAAGGGACAGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp CAGAGAGCGAGGGAAGATGGAGAGAAGGCTTCTCACGCTTGCCTCAGGTTTGGACCACAGATGTACAGGTaGTTCCATTTTCGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: QRAREDGEKASHACLRFGPQMYR*FHFRRD
Trigger: ATCCCTGCGAAAATGGAAGCACCTGTACATCTGTGG...TCCAAACCTGAGGCAAGCGTGAGAAGCCTTCTCTCCATCTTCCCTCGCTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp AACCTACTGTGTGTGCACCAGTCTCTCAGATCACACGCTGTGGAAAGAAACTGGCGTGGATGCAGGGATTaGTCAGGCACTCGTTCACCT +
Preference number: 4 (lower is better)
Translates to: NLLCVHQSLRSHAVERNWRGCRD*SGTRSP
Trigger: AGGTGAACGAGTGCCTGAGCAATCCCTGCATCCACG...CCAGTTTCTTTCCACAGCGTGTGATCTGAGAGACTGGTGCACACACAGTAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp AAGTTGGCAGTCACTGGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAATGGCGCTCTCAAAATTGGGTaGCTCTTTACAAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: KLAVTGSPVPQASSVLNGALKIG*LFTNSS
Trigger: GCTGCTGTTTGTAAAGAGGCACCCAATTTTGAGAGC...GCCATTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATTCCTGCTCCTGCTCCTaGTCCTCAGGAAGAGACCTG +
Preference number: 4 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDSCSCS*SSGRDL
Trigger: CAGGTCTCTTCCTGAGGAGCAGGAGCAGGAGCAGGA...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp TGGAACCCAAATACAGACTCCACGTCTTCACTGAGAACCTACTGTGTGTGCACCAGTGTGGCGGATGTCTaGAGCTTCAAGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WNPNTDSTSSLRTYCVCTSVADV*SFKVLL
Trigger: CAGCAGCACCTTGAAGCTGCAGACATCCGCCACACT...GGTGCACACACAGTAGGTTCTCAGTGAAGACGTGGAGTCTGTATTTGGGTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATTCTCGAATAGCGGGCTaGAAGGTGCAGGGCCATCTC +
Preference number: 4 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDSRIAG*KVQGHL
Trigger: GAGATGGCCCTGCACCTTGCAGCCCGCTATTCGAGA...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp AACCTACTGTGTGTGCACCAGTCTCTCAGATCACACGCTGTGGAAAGAAACTGGGTTGTCCTGGGCATTTaGATCCGCACCAGCATCCAG +
Preference number: 4 (lower is better)
Translates to: NLLCVHQSLRSHAVERNWVVLGI*IRTSIQ
Trigger: CTGGATGCTGGTGCGGATGCAAATGCCCAGGACAAC...CCAGTTTCTTTCCACAGCGTGTGATCTGAGAGACTGGTGCACACACAGTAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AACCTACTGTGTGTGCACCAGTCTCTCAGATCACACGCTGTGGAAAGAAACTGGGGGGGACACAGACACTaGAAGCGGTTGACTTTGTCC +
Preference number: 4 (lower is better)
Translates to: NLLCVHQSLRSHAVERNWGGHRH*KRLTLS
Trigger: GGACAAAGTCAACCGCTTCCAGTGTCTGTGTCCCCC...CCAGTTTCTTTCCACAGCGTGTGATCTGAGAGACTGGTGCACACACAGTAGGTT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp TGGAACCCAAATACAGACTCCACGTCTTCACTGAGAACCTACTGTGTGTGCACCCCATTCTGGCAGGGTTaGTTCTGGCACTCGTCCACT +
Preference number: 4 (lower is better)
Translates to: WNPNTDSTSSLRTYCVCTPFWQG*FWHSST
Trigger: AGTGGACGAGTGCCAGAACCAACCCTGCCAGAATGG...GGTGCACACACAGTAGGTTCTCAGTGAAGACGTGGAGTCTGTATTTGGGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp GGAGACTGTCCCTTCTCCACATCTGGAACCCAAATACAGACTCCACGTCTTCACCATCCAGGAGGCGTTTaGCAGCATCAGCTCTCGAAT +
Preference number: 4 (lower is better)
Translates to: GDCPFSTSGTQIQTPRLHHPGGV*QHQLSN
Trigger: ATTCGAGAGCTGATGCTGCCAAACGCCTCCTGGATG...GTGAAGACGTGGAGTCTGTATTTGGGTTCCAGATGTGGAGAAGGGACAGTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AAGTTGGCAGTCACTGGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAATGGCAGGGCAGATTTTCCATaGTCATCCACTGCATTGACA +
Preference number: 4 (lower is better)
Translates to: KLAVTGSPVPQASSVLNGRADFP*SSTALT
Trigger: TGTCAATGCAGTGGATGACCATGGAAAATCTGCCCT...GCCATTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATGGTGACCACCATGACTaGGGGTTCGCTCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDGDHHD*GFAQQH
Trigger: ATGCTGCTGAGCGAACCCCCAGTCATGGTGGTCACC...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AACCTACTGTGTGTGCACCAGTCTCTCAGATCACACGCTGTGGAAAGAAACTGGAGGAGACTCTGGGGATaGTGTCAGGTATGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: NLLCVHQSLRSHAVERNWRRLWG*CQVWVL
Trigger: GAGCACCCATACCTGACACCATCCCCAGAGTCTCCT...CCAGTTTCTTTCCACAGCGTGTGATCTGAGAGACTGGTGCACACACAGTAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AACCTACTGTGTGTGCACCAGTCTCTCAGATCACACGCTGTGGAAAGAAACTGGCAGGAGTTGGGCTGGTaGTCACATCTGACCAGTCAG +
Preference number: 4 (lower is better)
Translates to: NLLCVHQSLRSHAVERNWQELGW*SHLTSQ
Trigger: CTGACTGGTCAGATGTGACCACCAGCCCAACTCCTG...CCAGTTTCTTTCCACAGCGTGTGATCTGAGAGACTGGTGCACACACAGTAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp ACATGCAGGGGAGAGAAATTAAGGTGCAGGTTCAGAAGGAGGCTTCTAGTCCCCCTGAATGACACTCGTTaGTGTCCATCTCACAGCGAG +
Preference number: 4 (lower is better)
Translates to: TCRGEKLRCRFRRRLLVPLNDTR*CPSHSE
Trigger: CTCGCTGTGAGATGGACATCAACGAGTGTCATTCAG...GGGGACTAGAAGCCTCCTTCTGAACCTGCACCTTAATTTCTCTCCCCTGCATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATTGTCCACCTCACAGTTaGCACCAACCCAGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDCPPHS*HQPSLH
Trigger: ATGCAGGCTGGGTTGGTGTCAACTGTGAGGTGGACA...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp CACATCCCTCCTCCTAAATCCCAAAGGATCCTCTTTGAGGGATCCTTGAAGGAGGGCAGTTGTAGCCTTTaGACCCCTTCTTGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: HIPPPKSQRILFEGSLKEGSCSL*TPSCRY
Trigger: GTACCTGCAAGAAGGGGTTCAAAGGCTACAACTGCC...CTCCTTCAAGGATCCCTCAAAGAGGATCCTTTGGGATTTAGGAGGAGGGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp ACATGCAGGGGAGAGAAATTAAGGTGCAGGTTCAGAAGGAGGCTTCTAGTCCCCTTGCGGATCAGAATCTaGAAGACACCTTGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: TCRGEKLRCRFRRRLLVPLRIRI*KTPWAS
Trigger: AGACGCCCAAGGTGTCTTTCAGATTCTGATCCGCAA...GGGGACTAGAAGCCTCCTTCTGAACCTGCACCTTAATTTCTCTCCCCTGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp AACCTACTGTGTGTGCACCAGTCTCTCAGATCACACGCTGTGGAAAGAAACTGGTTCGGTTGGTGCAGGTaGCTCCATTCTGACAAGCGT +
Preference number: 4 (lower is better)
Translates to: NLLCVHQSLRSHAVERNWFGWCR*LHSDKR
Trigger: ACGCTTGTCAGAATGGAGGCACCTGCACCAACCGAA...CCAGTTTCTTTCCACAGCGTGTGATCTGAGAGACTGGTGCACACACAGTAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp TGGAACCCAAATACAGACTCCACGTCTTCACTGAGAACCTACTGTGTGTGCACCTCCACACAGACTCCGTaGATACAAGGGTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: WNPNTDSTSSLRTYCVCTSTQTP*IQGLLA
Trigger: TGCCAGCAACCCTTGTATGCACGGAGTCTGTGTGGA...GGTGCACACACAGTAGGTTCTCAGTGAAGACGTGGAGTCTGTATTTGGGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp GGAGACTGTCCCTTCTCCACATCTGGAACCCAAATACAGACTCCACGTCTTCACTACAGTTTCCGTGGATaGAGGGATTGCTCAGGCACT +
Preference number: 4 (lower is better)
Translates to: GDCPFSTSGTQIQTPRLHYSFRG*RDCSGT
Trigger: AGTGCCTGAGCAATCCCTGCATCCACGGAAACTGTA...GTGAAGACGTGGAGTCTGTATTTGGGTTCCAGATGTGGAGAAGGGACAGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp CACATCCCTCCTCCTAAATCCCAAAGGATCCTCTTTGAGGGATCCTTGAAGGAGACAGGTACTCCTTTCTaGAAGGCTGCCGCCTTACAG +
Preference number: 4 (lower is better)
Translates to: HIPPPKSQRILFEGSLKETGTPF*KAAALQ
Trigger: CTGTAAGGCGGCAGCCTTGCAGAAAGGAGTACCTGT...CTCCTTCAAGGATCCCTCAAAGAGGATCCTTTGGGATTTAGGAGGAGGGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp GGAGACTGTCCCTTCTCCACATCTGGAACCCAAATACAGACTCCACGTCTTCACAGCCAGGAGAGCAGCTaGCGCATCTGTGTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: GDCPFSTSGTQIQTPRLHSQESS*RICVFE
Trigger: TTCAAAAACACAGATGCGGCAGCTGCTCTCCTGGCT...GTGAAGACGTGGAGTCTGTATTTGGGTTCCAGATGTGGAGAAGGGACAGTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp AACCTACTGTGTGTGCACCAGTCTCTCAGATCACACGCTGTGGAAAGAAACTGGACGGTTCATCCAGTCTaGTGGGACAGGAACTGGATG +
Preference number: 4 (lower is better)
Translates to: NLLCVHQSLRSHAVERNWTVHPV*WDRNWM
Trigger: CATCCAGTTCCTGTCCCAGCAGACTGGATGAACCGT...CCAGTTTCTTTCCACAGCGTGTGATCTGAGAGACTGGTGCACACACAGTAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp TGGAACCCAAATACAGACTCCACGTCTTCACTGAGAACCTACTGTGTGTGCACCCATACACCTGCATGTTaGTGTGTGGTGGCTCGGACA +
Preference number: 4 (lower is better)
Translates to: WNPNTDSTSSLRTYCVCTHTPAC*CVVART
Trigger: TGTCCGAGCCACCACACAGCAACATGCAGGTGTATG...GGTGCACACACAGTAGGTTCTCAGTGAAGACGTGGAGTCTGTATTTGGGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AACCTACTGTGTGTGCACCAGTCTCTCAGATCACACGCTGTGGAAAGAAACTGGATTCTCACACGGGTTTaGGGAACAGGGAGCCAACAC +
Preference number: 4 (lower is better)
Translates to: NLLCVHQSLRSHAVERNWILTRV*GTGSQH
Trigger: GTGTTGGCTCCCTGTTCCCCAAACCCGTGTGAGAAT...CCAGTTTCTTTCCACAGCGTGTGATCTGAGAGACTGGTGCACACACAGTAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp GGGGCAATTATTAGCCCTATGACTGAGGAGAAAACTATCATCCTAGATTACCACGCCAGGTTCTCAGGCTaGTCCGAAGCGCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GAIISPMTEEKTIILDYHARFSG*SEAQSS
Trigger: GCTGGACTGCGCTTCGGACCAGCCTGAGAACCTGGC...GTGGTAATCTAGGATGATAGTTTTCTCCTCAGTCATAGGGCTAATAATTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp CAGAGAGCGAGGGAAGATGGAGAGAAGGCTTCTCACGCTTGCCTCAGGTTTGGAGGTCTAACAGGATTTTaGCCGCTTCATAACTTCCCT +
Preference number: 4 (lower is better)
Translates to: QRAREDGEKASHACLRFGGLTGF*PLHNFP
Trigger: AGGGAAGTTATGAAGCGGCCAAAATCCTGTTAGACC...TCCAAACCTGAGGCAAGCGTGAGAAGCCTTCTCTCCATCTTCCCTCGCTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp TGGAACCCAAATACAGACTCCACGTCTTCACTGAGAACCTACTGTGTGTGCACCGGCACTTATAGCCACTaGGACCTCCAGTACAGTTTC +
Preference number: 4 (lower is better)
Translates to: WNPNTDSTSSLRTYCVCTGTYSH*DLQYSF
Trigger: GAAACTGTACTGGAGGTCTCAGTGGCTATAAGTGCC...GGTGCACACACAGTAGGTTCTCAGTGAAGACGTGGAGTCTGTATTTGGGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp TGGAACCCAAATACAGACTCCACGTCTTCACTGAGAACCTACTGTGTGTGCACCGGGGACACGAACACTTaGAATGGTTCACAAGGTCGA +
Preference number: 4 (lower is better)
Translates to: WNPNTDSTSSLRTYCVCTGDTNT*NGSQGR
Trigger: TCGACCTTGTGAACCATTTCAAGTGTTCGTGTCCCC...GGTGCACACACAGTAGGTTCTCAGTGAAGACGTGGAGTCTGTATTTGGGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp GGAGACTGTCCCTTCTCCACATCTGGAACCCAAATACAGACTCCACGTCTTCACCATCTGCTTGGCAATTaGTCAACTCTGCCACCATTC +
Preference number: 4 (lower is better)
Translates to: GDCPFSTSGTQIQTPRLHHLLGN*STLPPF
Trigger: GAATGGTGGCAGAGTTGATCAATTGCCAAGCAGATG...GTGAAGACGTGGAGTCTGTATTTGGGTTCCAGATGTGGAGAAGGGACAGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp GGGGCAATTATTAGCCCTATGACTGAGGAGAAAACTATCATCCTAGATTACCACGTTGGCACAATGGTCTaGGCTACCTGCCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GAIISPMTEEKTIILDYHVGTMV*ATCPSC
Trigger: GCAGGAGGGGCAGGTAGCTCAGACCATTGTGCCAAC...GTGGTAATCTAGGATGATAGTTTTCTCCTCAGTCATAGGGCTAATAATTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp TCTGGGGTAGGTCCAGTGACCAGACCCAGTGGCTGGATTCTTGGTTACTGTTCGATTCACACACTTTCCTaGATGCTCACAAGGGTTACT +
Preference number: 4 (lower is better)
Translates to: SGVGPVTRPSGWILGYCSIHTLS*MLTRVT
Trigger: AGTAACCCTTGTGAGCATGCAGGAAAGTGTGTGAAT...CGAACAGTAACCAAGAATCCAGCCACTGGGTCTGGTCACTGGACCTACCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp AACCTACTGTGTGTGCACCAGTCTCTCAGATCACACGCTGTGGAAAGAAACTGGGTACATCGTTTACCTTaGCAGCCAGGAGCACACAAG +
Preference number: 4 (lower is better)
Translates to: NLLCVHQSLRSHAVERNWVHRLP*QPGAHK
Trigger: CTTGTGTGCTCCTGGCTGGCAAGGTAAACGATGTAC...CCAGTTTCTTTCCACAGCGTGTGATCTGAGAGACTGGTGCACACACAGTAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp TGGAACCCAAATACAGACTCCACGTCTTCACTGAGAACCTACTGTGTGTGCACCCAGACAGTGGGGCCTTaGCTTTTCCTGAACACAAGT +
Preference number: 4 (lower is better)
Translates to: WNPNTDSTSSLRTYCVCTQTVGP*LFLNTS
Trigger: ACTTGTGTTCAGGAAAAGGCAAGGCCCCACTGTCTG...GGTGCACACACAGTAGGTTCTCAGTGAAGACGTGGAGTCTGTATTTGGGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp ACATGCAGGGGAGAGAAATTAAGGTGCAGGTTCAGAAGGAGGCTTCTAGTCCCCTCCATGGTCATCCACTaGATTGACATCTGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: TCRGEKLRCRFRRRLLVPSMVIH*IDICLA
Trigger: TGCCAAGCAGATGTCAATGCAGTGGATGACCATGGA...GGGGACTAGAAGCCTCCTTCTGAACCTGCACCTTAATTTCTCTCCCCTGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp GGAGACTGTCCCTTCTCCACATCTGGAACCCAAATACAGACTCCACGTCTTCACATTATTGACAGCAGCTaGCCAGTGGAGGGCAGATTT +
Preference number: 4 (lower is better)
Translates to: GDCPFSTSGTQIQTPRLHIIDSS*PVEGRF
Trigger: AAATCTGCCCTCCACTGGGCAGCTGCTGTCAATAAT...GTGAAGACGTGGAGTCTGTATTTGGGTTCCAGATGTGGAGAAGGGACAGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp GGGGCAATTATTAGCCCTATGACTGAGGAGAAAACTATCATCCTAGATTACCACGCTACCTGCCCCTCCTaGTGGGGCATCATGGTAGGT +
Preference number: 4 (lower is better)
Translates to: GAIISPMTEEKTIILDYHATCPS*WGIMVG
Trigger: ACCTACCATGATGCCCCAGCAGGAGGGGCAGGTAGC...GTGGTAATCTAGGATGATAGTTTTCTCCTCAGTCATAGGGCTAATAATTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp TGGAACCCAAATACAGACTCCACGTCTTCACTGAGAACCTACTGTGTGTGCACCTCTGACACTTGTGGTTaGGGCAGTCGTCGATATTCC +
Preference number: 4 (lower is better)
Translates to: WNPNTDSTSSLRTYCVCTSDTCG*GSRRYS
Trigger: GGAATATCGACGACTGCCCCAACCACAAGTGTCAGA...GGTGCACACACAGTAGGTTCTCAGTGAAGACGTGGAGTCTGTATTTGGGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATCCTATGAAGCCAGGATaGCACTGGCAGGAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDPMKPG*HWQEKV
Trigger: TACCTTCTCCTGCCAGTGCCATCCTGGCTTCATAGG...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AACCTACTGTGTGTGCACCAGTCTCTCAGATCACACGCTGTGGAAAGAAACTGGTCTGTGCTTGAAGGCTaGCACCTTGGTAGACCAAGT +
Preference number: 4 (lower is better)
Translates to: NLLCVHQSLRSHAVERNWSVLEG*HLGRPS
Trigger: ACTTGGTCTACCAAGGTGCCAGCCTTCAAGCACAGA...CCAGTTTCTTTCCACAGCGTGTGATCTGAGAGACTGGTGCACACACAGTAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp GGAGACTGTCCCTTCTCCACATCTGGAACCCAAATACAGACTCCACGTCTTCACGGCAATTGTAGGTATTaGCACCATCCACACAAACTC +
Preference number: 4 (lower is better)
Translates to: GDCPFSTSGTQIQTPRLHGNCRY*HHPHKL
Trigger: GAGTTTGTGTGGATGGTGTCAATACCTACAATTGCC...GTGAAGACGTGGAGTCTGTATTTGGGTTCCAGATGTGGAGAAGGGACAGTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATCACAATGCACACCTTTaGAACCTGGCATGCACAGAC +
Preference number: 4 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDHNAHL*NLACTD
Trigger: GTCTGTGCATGCCAGGTTTCAAAGGTGTGCATTGTG...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATTCGCTGTTGCATCCCTaGTCACAGTGGTTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDSLLHP*SQWLSL
Trigger: CAAAGACAACCACTGTGATCAGGGATGCAACAGCGA...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATTATTCCGCTCACAGGTaGTCCCTTCAAAACCTGGCA +
Preference number: 4 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDYSAHR*SLQNLA
Trigger: TGCCAGGTTTTGAAGGGAGCACCTGTGAGCGGAATA...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATACCTCCAGCTCACAATaGACACCTTTGAAACCTGGC +
Preference number: 4 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDTSSSQ*TPLKPG
Trigger: GCCAGGTTTCAAAGGTGTGCATTGTGAGCTGGAGGT...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp AGCAAGTTAGCTTATTTCTTGGACATTCCAACACTCACCCACTTTTCCTACTTTTGCACGTCGCACCCTTaGGACAGGGGTTGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: SKLAYFLDIPTLTHFSYFCTSHP*DRGWRH
Trigger: GTGCCTCCAACCCCTGTCGCAAGGGTGCGACGTGCA...AAAGTAGGAAAAGTGGGTGAGTGTTGGAATGTCCAAGAAATAAGCTAACTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp ACATGCAGGGGAGAGAAATTAAGGTGCAGGTTCAGAAGGAGGCTTCTAGTCCCCAGCAGGAGCTCTCAGTaGACTCGTCAATGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: TCRGEKLRCRFRRRLLVPSRSSQ*TRQCCF
Trigger: AAAACAACATTGACGAGTGCACTGAGAGCTCCTGCT...GGGGACTAGAAGCCTCCTTCTGAACCTGCACCTTAATTTCTCTCCCCTGCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp GGGGCAATTATTAGCCCTATGACTGAGGAGAAAACTATCATCCTAGATTACCACGAGCCTATCACCTCCTaGTCCTGCTCCTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GAIISPMTEEKTIILDYHEPITS*SCSCSS
Trigger: TGAGGAGCAGGAGCAGGAGCAGGAGGTGATAGGCTC...GTGGTAATCTAGGATGATAGTTTTCTCCTCAGTCATAGGGCTAATAATTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp AACCTACTGTGTGTGCACCAGTCTCTCAGATCACACGCTGTGGAAAGAAACTGGCAGGAGCCAGGACCATaGCAAACATTTCACTGTACT +
Preference number: 4 (lower is better)
Translates to: NLLCVHQSLRSHAVERNWQEPGP*QTFHCT
Trigger: AGTACAGTGAAATGTTTGGCATGGTCCTGGCTCCTG...CCAGTTTCTTTCCACAGCGTGTGATCTGAGAGACTGGTGCACACACAGTAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp TGGAACCCAAATACAGACTCCACGTCTTCACTGAGAACCTACTGTGTGTGCACCCACACCTTTGAAACCTaGCATGCACAGACAGGTGAA +
Preference number: 4 (lower is better)
Translates to: WNPNTDSTSSLRTYCVCTHTFET*HAQTGE
Trigger: TTCACCTGTCTGTGCATGCCAGGTTTCAAAGGTGTG...GGTGCACACACAGTAGGTTCTCAGTGAAGACGTGGAGTCTGTATTTGGGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp CACATCCCTCCTCCTAAATCCCAAAGGATCCTCTTTGAGGGATCCTTGAAGGAGATGGTGGCAAGGATCTaGGTCACAGTTGTCGATGTT +
Preference number: 4 (lower is better)
Translates to: HIPPPKSQRILFEGSLKEMVARI*VTVVDV
Trigger: AACATCGACAACTGTGACCCAGATCCTTGCCACCAT...CTCCTTCAAGGATCCCTCAAAGAGGATCCTTTGGGATTTAGGAGGAGGGATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp GGGGCAATTATTAGCCCTATGACTGAGGAGAAAACTATCATCCTAGATTACCACGAGTCGATCCCATCCTaGCACTGGCCATGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: GAIISPMTEEKTIILDYHESIPS*HWPWWQ
Trigger: TTGCCACCATGGCCAGTGCCAGGATGGGATCGACTC...GTGGTAATCTAGGATGATAGTTTTCTCCTCAGTCATAGGGCTAATAATTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AACCTACTGTGTGTGCACCAGTCTCTCAGATCACACGCTGTGGAAAGAAACTGGTCCCGGTTGGCAAAATaGTCTAACAGGATTTTGGCC +
Preference number: 4 (lower is better)
Translates to: NLLCVHQSLRSHAVERNWSRLAK*SNRILA
Trigger: GGCCAAAATCCTGTTAGACCATTTTGCCAACCGGGA...CCAGTTTCTTTCCACAGCGTGTGATCTGAGAGACTGGTGCACACACAGTAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACGGGGGCGCGATGTGGTaGTGGGATAGCAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYGGAMW*WDSSWL
Trigger: CAGCCAGCTGCTATCCCACCACCACATCGCGCCCCC...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AGCAAGTTAGCTTATTTCTTGGACATTCCAACACTCACCCACTTTTCCTACTTTTCCGGAGGTCTGCTCTaGGGAGCTGCTATGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SKLAYFLDIPTLTHFSYFSGGLL*GAAMPG
Trigger: CCCTGGCATAGCAGCTCCCCAGAGCAGACCTCCGGA...AAAGTAGGAAAAGTGGGTGAGTGTTGGAATGTCCAAGAAATAAGCTAACTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AACCTACTGTGTGTGCACCAGTCTCTCAGATCACACGCTGTGGAAAGAAACTGGGGCAATGCTGCCTTTTaGGATAAGCTGGAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: NLLCVHQSLRSHAVERNWGNAAF*DKLESH
Trigger: GTGACTTTCCAGCTTATCCCAAAAGGCAGCATTGCC...CCAGTTTCTTTCCACAGCGTGTGATCTGAGAGACTGGTGCACACACAGTAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACCGTAGGTGTCCCGGCTaGGCATGTGACAGGTACCCC +
Preference number: 4 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYRRCPG*ACDRYP
Trigger: GGGGTACCTGTCACATGCTCAGCCGGGACACCTACG...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp GGGGCAATTATTAGCCCTATGACTGAGGAGAAAACTATCATCCTAGATTACCACGACACTGGAAGCGGTTaGCTTTGTCCACACACTGCC +
Preference number: 4 (lower is better)
Translates to: GAIISPMTEEKTIILDYHDTGSG*LCPHTA
Trigger: GGCAGTGTGTGGACAAAGTCAACCGCTTCCAGTGTC...GTGGTAATCTAGGATGATAGTTTTCTCCTCAGTCATAGGGCTAATAATTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp CACATCCCTCCTCCTAAATCCCAAAGGATCCTCTTTGAGGGATCCTTGAAGGAGCTTCATACTCACAGTTaGCACCCTGATATCCTGGAA +
Preference number: 4 (lower is better)
Translates to: HIPPPKSQRILFEGSLKELHTHS*HPDILE
Trigger: TTCCAGGATATCAGGGTGTCAACTGTGAGTATGAAG...CTCCTTCAAGGATCCCTCAAAGAGGATCCTTTGGGATTTAGGAGGAGGGATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp TGGAACCCAAATACAGACTCCACGTCTTCACTGAGAACCTACTGTGTGTGCACCCACAGTGGTTGTCTTTaGAGTGGTCTGCACAGTATT +
Preference number: 4 (lower is better)
Translates to: WNPNTDSTSSLRTYCVCTHSGCL*SGLHSI
Trigger: AATACTGTGCAGACCACTTCAAAGACAACCACTGTG...GGTGCACACACAGTAGGTTCTCAGTGAAGACGTGGAGTCTGTATTTGGGTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATAATCAGGTTAGCCTCTaGCACTTGCACGGAGAGATT +
Preference number: 4 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDNQVSL*HLHGEI
Trigger: AATCTCTCCGTGCAAGTGTCAGAGGCTAACCTGATT...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp ACATGCAGGGGAGAGAAATTAAGGTGCAGGTTCAGAAGGAGGCTTCTAGTCCCCTCCTCCATTCTGGCATaGGTTAGAAAGACACTCATT +
Preference number: 4 (lower is better)
Translates to: TCRGEKLRCRFRRRLLVPSSILA*VRKTLI
Trigger: AATGAGTGTCTTTCTAACCCATGCCAGAATGGAGGA...GGGGACTAGAAGCCTCCTTCTGAACCTGCACCTTAATTTCTCTCCCCTGCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp TGGAACCCAAATACAGACTCCACGTCTTCACTGAGAACCTACTGTGTGTGCACCCACTGCTCATCACACTaGTTGTTGATGTATTCCCAG +
Preference number: 4 (lower is better)
Translates to: WNPNTDSTSSLRTYCVCTHCSSH*LLMYSQ
Trigger: CTGGGAATACATCAACAACCAGTGTGATGAGCAGTG...GGTGCACACACAGTAGGTTCTCAGTGAAGACGTGGAGTCTGTATTTGGGTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATTCTTCTGCTTCTTCATaGCAGCTGACTTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDSSASS*QLTSPQ
Trigger: TTGGGGAGAAGTCAGCTGCCATGAAGAAGCAGAAGA...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AGATATAATGTCACTTTTCAGGGAAATATACACGAGGAAGTTGCCATAGTACCACAGCTGGAGGGCAACTaGACTGCGTCTGGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: RYNVTFQGNIHEEVAIVPQLEGN*TASGEL
Trigger: GAGCTCCCCAGACGCAGTCCAGTTGCCCTCCAGCTG...TGGTACTATGGCAACTTCCTCGTGTATATTTCCCTGAAAAGTGACATTATATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACGACACTGCTTCCCTGTaGAGCCGACTTGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYDTASL*SRLGRC
Trigger: GCACCTGCCAAGTCGGCTTCACAGGGAAGCAGTGTC...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp AGCAAGTTAGCTTATTTCTTGGACATTCCAACACTCACCCACTTTTCCTACTTTCACAGCGCCCCCTTGTaGCAAGGGTTGCTGATACAG +
Preference number: 4 (lower is better)
Translates to: SKLAYFLDIPTLTHFSYFHSAPL*QGLLIQ
Trigger: CTGTATCAGCAACCCTTGTCACAAGGGGGCGCTGTG...AAAGTAGGAAAAGTGGGTGAGTGTTGGAATGTCCAAGAAATAAGCTAACTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACAGGGGGCACTGGCAGTaGTGGGTGTTGCCAGCATTG +
Preference number: 4 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYRGHWQ*WVLPAL
Trigger: CAATGCTGGCAACACCCATCACTGCCAGTGCCCCCT...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATCATACTTGCACGTCTTaGTATTCCTCTGGCACTCAA +
Preference number: 4 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDHTCTS*YSSGTQ
Trigger: TTGAGTGCCAGAGGAATAGCAAGACGTGCAAGTATG...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp AGATATAATGTCACTTTTCAGGGAAATATACACGAGGAAGTTGCCATAGTACCACTGAGGAGGAGTGAGTaGCAGGGATGGAGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: RYNVTFQGNIHEEVAIVPLRRSE*QGWSVA
Trigger: CGCCACACTCCATCCCTGGCACTCACTCCTCCTCAG...TGGTACTATGGCAACTTCCTCGTGTATATTTCCCTGAAAAGTGACATTATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp GGGGCAATTATTAGCCCTATGACTGAGGAGAAAACTATCATCCTAGATTACCACCTGCATGTTGCTGTGTaGTGGCTCGGACATGTGTGT +
Preference number: 4 (lower is better)
Translates to: GAIISPMTEEKTIILDYHLHVAV*WLGHVC
Trigger: ACACACATGTCCGAGCCACCACACAGCAACATGCAG...GTGGTAATCTAGGATGATAGTTTTCTCCTCAGTCATAGGGCTAATAATTGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACTCAGCTTCACACTTCTaGCCTGTGAGGCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYSASHF*PVRPAG
Trigger: CCCTGCAGGCCTCACAGGGCAGAAGTGTGAAGCTGA...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp AGATATAATGTCACTTTTCAGGGAAATATACACGAGGAAGTTGCCATAGTACCATACACGGAGACCGGCTaGAGAGGTTCACCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: RYNVTFQGNIHEEVAIVPYTETG*RGSPGS
Trigger: AGACCCTGGTGAACCTCTGCAGCCGGTCTCCGTGTA...TGGTACTATGGCAACTTCCTCGTGTATATTTCCCTGAAAAGTGACATTATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACTGGCACTGGCCATGGTaGCAAGGATCTGGGTCACAG +
Preference number: 4 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYWHWPW*QGSGSQ
Trigger: CTGTGACCCAGATCCTTGCCACCATGGCCAGTGCCA...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp GGGGCAATTATTAGCCCTATGACTGAGGAGAAAACTATCATCCTAGATTACCACTCAAAGCAGGTTCCTTaGTTCAGACACGGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: GAIISPMTEEKTIILDYHSKQVP*FRHGLE
Trigger: CTCCAACCCGTGTCTGAACCAAGGAACCTGCTTTGA...GTGGTAATCTAGGATGATAGTTTTCTCCTCAGTCATAGGGCTAATAATTGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AGCAAGTTAGCTTATTTCTTGGACATTCCAACACTCACCCACTTTTCCTACTTTACAGCAGCTGCCCAGTaGAGGGCAGATTTTCCATGG +
Preference number: 4 (lower is better)
Translates to: SKLAYFLDIPTLTHFSYFTAAAQ*RADFPW
Trigger: CCATGGAAAATCTGCCCTCCACTGGGCAGCTGCTGT...AAAGTAGGAAAAGTGGGTGAGTGTTGGAATGTCCAAGAAATAAGCTAACTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AGCAAGTTAGCTTATTTCTTGGACATTCCAACACTCACCCACTTTTCCTACTTTGGGCATCATGGTAGGTaGGAAAGCCACACTGGGCAA +
Preference number: 4 (lower is better)
Translates to: SKLAYFLDIPTLTHFSYFGHHGR*ESHTGQ
Trigger: TTGCCCAGTGTGGCTTTCCCACCTACCATGATGCCC...AAAGTAGGAAAAGTGGGTGAGTGTTGGAATGTCCAAGAAATAAGCTAACTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp GTAAAAACAGTGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTGGATGGTGTCAGGTATaGGTGCTCGCCCTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: VKTVCIFLPIFSQEHEVIGWCQV*VLALEV
Trigger: CACCTCCAGGGCGAGCACCCATACCTGACACCATCC...AATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACACTGTTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACGACACAAAGCAGGGGTaGGAGGTGGAGTATTGGCAG +
Preference number: 4 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYDTKQG*EVEYWQ
Trigger: CTGCCAATACTCCACCTCTCACCCCTGCTTTGTGTC...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp AGCAAGTTAGCTTATTTCTTGGACATTCCAACACTCACCCACTTTTCCTACTTTCTTCTTCATGGCAGCTaGCTTCTCCCCAAAGTAGGG +
Preference number: 4 (lower is better)
Translates to: SKLAYFLDIPTLTHFSYFLLHGS*LLPKVG
Trigger: CCCTACTTTGGGGAGAAGTCAGCTGCCATGAAGAAG...AAAGTAGGAAAAGTGGGTGAGTGTTGGAATGTCCAAGAAATAAGCTAACTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp AGCAAGTTAGCTTATTTCTTGGACATTCCAACACTCACCCACTTTTCCTACTTTCGTCCACATCTTCTGTaGAGAACTGCCCAGTCCACT +
Preference number: 4 (lower is better)
Translates to: SKLAYFLDIPTLTHFSYFRPHLL*RTAQST
Trigger: AGTGGACTGGGCAGTTCTGCACAGAAGATGTGGACG...AAAGTAGGAAAAGTGGGTGAGTGTTGGAATGTCCAAGAAATAAGCTAACTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACCTCCGTTTCGGTTGGTaGAGGTGCCTCCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYLRFGW*RCLHSD
Trigger: GTCAGAATGGAGGCACCTGCACCAACCGAAACGGAG...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp CACATCCCTCCTCCTAAATCCCAAAGGATCCTCTTTGAGGGATCCTTGAAGGAGGTCTTTGAAGTGGTCTaGACAGTATTTGTCATACTT +
Preference number: 4 (lower is better)
Translates to: HIPPPKSQRILFEGSLKEVFEVV*TVFVIL
Trigger: AAGTATGACAAATACTGTGCAGACCACTTCAAAGAC...CTCCTTCAAGGATCCCTCAAAGAGGATCCTTTGGGATTTAGGAGGAGGGATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp GGGGCAATTATTAGCCCTATGACTGAGGAGAAAACTATCATCCTAGATTACCACGCAATTGATCAACTCTaGCACCATTCCTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: GAIISPMTEEKTIILDYHAIDQL*HHSFHS
Trigger: GCTGTGGAAGGAATGGTGGCAGAGTTGATCAATTGC...GTGGTAATCTAGGATGATAGTTTTCTCCTCAGTCATAGGGCTAATAATTGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp AGATATAATGTCACTTTTCAGGGAAATATACACGAGGAAGTTGCCATAGTACCAGACACTTCTTCCTCCTaGTGCCCTTGGCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: RYNVTFQGNIHEEVAIVPDTSSS*CPWHPW
Trigger: CCAAGGATGCCAAGGGCAGCAGGAGGAAGAAGTGTC...TGGTACTATGGCAACTTCCTCGTGTATATTTCCCTGAAAAGTGACATTATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp AGATATAATGTCACTTTTCAGGGAAATATACACGAGGAAGTTGCCATAGTACCAGAGAAAGACAGCGCATaGTGTGTGTGCACTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RYNVTFQGNIHEEVAIVPEKDSA*CVCTGA
Trigger: TGCCCCAGTGCACACACAGCATGCGCTGTCTTTCTC...TGGTACTATGGCAACTTCCTCGTGTATATTTCCCTGAAAAGTGACATTATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACGCCCTTGTAGCCCTGTaGGCAGGTGCAAATGTACTG +
Preference number: 4 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYALVAL*AGANVL
Trigger: CAGTACATTTGCACCTGCCCACAGGGCTACAAGGGC...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AGCAAGTTAGCTTATTTCTTGGACATTCCAACACTCACCCACTTTTCCTACTTTCAGATGCCCGAGTGCTaGCACAAGTGTTCAACAGGT +
Preference number: 4 (lower is better)
Translates to: SKLAYFLDIPTLTHFSYFQMPEC*HKCSTG
Trigger: ACCTGTTGAACACTTGTGCCAGCACTCGGGCATCTG...AAAGTAGGAAAAGTGGGTGAGTGTTGGAATGTCCAAGAAATAAGCTAACTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR CAA 72 bp GGGGGCGATTGCTTCTTGAGCAAGTTAGCTTATTTCTaGGACATTCCAACACTCACCCACTTTTCCTACTTT +
Preference number: 4 (lower is better)
Translates to: GGDCFLSKLAYF*DIPTLTHFSYF
Trigger: AAAGTAGGAAAAGTGGGTGAGTGTTGGAATGTCCAAGAAATAAGCTAACTTGCTCAAGAAGCAATCGCCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
3UTR CAA 72 bp CCTCCTAAATCCCAAAGGATCCTCTTTGAGGGATCCTaGAAGGAGAAACAGCAAGTTTGTTCTTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: PPKSQRILFEGS*KEKQQVCSSLC
Trigger: ACACAGAGAAGAACAAACTTGCTGTTTCTCCTTCAAGGATCCCTCAAAGAGGATCCTTTGGGATTTAGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp GTAAAAACAGTGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTCACAGCTGTAGCGATTaGTGCCGTCCACACAGACTC +
Preference number: 4 (lower is better)
Translates to: VKTVCIFLPIFSQEHEVIHSCSD*CRPHRL
Trigger: GAGTCTGTGTGGACGGCATCAATCGCTACAGCTGTG...AATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACACTGTTTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp AGCAAGTTAGCTTATTTCTTGGACATTCCAACACTCACCCACTTTTCCTACTTTGAGCACACAAGCAGCTaGAGCTCTCAAAATTGGGTG +
Preference number: 4 (lower is better)
Translates to: SKLAYFLDIPTLTHFSYFEHTSS*SSQNWV
Trigger: CACCCAATTTTGAGAGCTTCAGCTGCTTGTGTGCTC...AAAGTAGGAAAAGTGGGTGAGTGTTGGAATGTCCAAGAAATAAGCTAACTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp GGGGCAATTATTAGCCCTATGACTGAGGAGAAAACTATCATCCTAGATTACCACAGCAAGAGAAAGAGTTaGTTCCATCAACACACGTGC +
Preference number: 4 (lower is better)
Translates to: GAIISPMTEEKTIILDYHSKRKS*FHQHTC
Trigger: GCACGTGTGTTGATGGAATCAACTCTTTCTCTTGCT...GTGGTAATCTAGGATGATAGTTTTCTCCTCAGTCATAGGGCTAATAATTGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp AGATATAATGTCACTTTTCAGGGAAATATACACGAGGAAGTTGCCATAGTACCATCGCTCAGCAGCATTTaGGGAGGCGTAACTGTGTTG +
Preference number: 4 (lower is better)
Translates to: RYNVTFQGNIHEEVAIVPSLSSI*GGVTVL
Trigger: CAACACAGTTACGCCTCCTCAAATGCTGCTGAGCGA...TGGTACTATGGCAACTTCCTCGTGTATATTTCCCTGAAAAGTGACATTATATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp AGCAAGTTAGCTTATTTCTTGGACATTCCAACACTCACCCACTTTTCCTACTTTTCTGCGGTGTTGCACTaGTCATCACACTGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: SKLAYFLDIPTLTHFSYFSAVLH*SSHWLL
Trigger: CAACAACCAGTGTGATGAGCAGTGCAACACCGCAGA...AAAGTAGGAAAAGTGGGTGAGTGTTGGAATGTCCAAGAAATAAGCTAACTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp GGGGCAATTATTAGCCCTATGACTGAGGAGAAAACTATCATCCTAGATTACCACGATCGGTTACACGGTTaGGGATCAGAATCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: GAIISPMTEEKTIILDYHDRLHG*GSESER
Trigger: TCTTTCAGATTCTGATCCGCAACCGTGTAACCGATC...GTGGTAATCTAGGATGATAGTTTTCTCCTCAGTCATAGGGCTAATAATTGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACGATAGGTTGGCACAATaGTCTGAGCTACCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYDRLAQ*SELPAP
Trigger: AGGGGCAGGTAGCTCAGACCATTGTGCCAACCTATC...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AGCAAGTTAGCTTATTTCTTGGACATTCCAACACTCACCCACTTTTCCTACTTTGAAGAGCTTGACCATTaGTCAGGAGACTCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: SKLAYFLDIPTLTHFSYFEELDH*SGDSGD
Trigger: ATCCCCAGAGTCTCCTGACCAATGGTCAAGCTCTTC...AAAGTAGGAAAAGTGGGTGAGTGTTGGAATGTCCAAGAAATAAGCTAACTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp GTAAAAACAGTGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTGCATGCACAGACAGGTaGAGCCTCCGATCTTATCCA +
Preference number: 4 (lower is better)
Translates to: VKTVCIFLPIFSQEHEVIACTDR*SLRSYP
Trigger: TGGATAAGATCGGAGGCTTCACCTGTCTGTGCATGC...AATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACACTGTTTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp GTAAAAACAGTGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTCAGTGTGGATACACTaGTCCCCTCTCCTGCACTTC +
Preference number: 4 (lower is better)
Translates to: VKTVCIFLPIFSQEHEVISVWIH*SPLLHF
Trigger: GAAGTGCAGGAGAGGGGAGCAGTGTATCCACACTGA...AATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACACTGTTTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp GTAAAAACAGTGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTGTCAAACAGGCACTCTaGGGTGTTGCACTGCTCATC +
Preference number: 4 (lower is better)
Translates to: VKTVCIFLPIFSQEHEVIVKQAL*GVALLI
Trigger: GATGAGCAGTGCAACACCGCAGAGTGCCTGTTTGAC...AATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACACTGTTTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AGATATAATGTCACTTTTCAGGGAAATATACACGAGGAAGTTGCCATAGTACCACGTGCTGGCATGGATTaGATGCACACTCATCAAGCT +
Preference number: 4 (lower is better)
Translates to: RYNVTFQGNIHEEVAIVPRAGMD*MHTHQA
Trigger: AGCTTGATGAGTGTGCATCCAATCCATGCCAGCACG...TGGTACTATGGCAACTTCCTCGTGTATATTTCCCTGAAAAGTGACATTATATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACAGCCTTGGCTTTCTTTaGCTGGGGTCCTTCATCATC +
Preference number: 4 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYSLGFL*LGSFII
Trigger: GATGATGAAGGACCCCAGCCAAAGAAAGCCAAGGCT...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp AGATATAATGTCACTTTTCAGGGAAATATACACGAGGAAGTTGCCATAGTACCACATCACACTGGTTGTTaGTGTATTCCCAGCAGCGAA +
Preference number: 4 (lower is better)
Translates to: RYNVTFQGNIHEEVAIVPHHTGC*CIPSSE
Trigger: TTCGCTGCTGGGAATACATCAACAACCAGTGTGATG...TGGTACTATGGCAACTTCCTCGTGTATATTTCCCTGAAAAGTGACATTATATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp AGCAAGTTAGCTTATTTCTTGGACATTCCAACACTCACCCACTTTTCCTACTTTCGTTCAAGCAAGGGCTaGTGTAGCATTCATCAATCT +
Preference number: 4 (lower is better)
Translates to: SKLAYFLDIPTLTHFSYFRSSKG*CSIHQS
Trigger: AGATTGATGAATGCTACAGCAGCCCTTGCTTGAACG...AAAGTAGGAAAAGTGGGTGAGTGTTGGAATGTCCAAGAAATAAGCTAACTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACATACAGATGCCCGAGTaGTGGCACAAGTGTTCAACA +
Preference number: 4 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYIQMPE*WHKCST
Trigger: TGTTGAACACTTGTGCCAGCACTCGGGCATCTGTAT...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp AGCAAGTTAGCTTATTTCTTGGACATTCCAACACTCACCCACTTTTCCTACTTTTCTTCCTTATTGTCCTaGATATCTCTGTTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SKLAYFLDIPTLTHFSYFSSLLS*ISLLAP
Trigger: TGGGGCCAACAGAGATATGCAGGACAATAAGGAAGA...AAAGTAGGAAAAGTGGGTGAGTGTTGGAATGTCCAAGAAATAAGCTAACTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp GTAAAAACAGTGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTGCTCCCTTCAAAACCTaGCAGGCAGTTGCATTCGAA +
Preference number: 4 (lower is better)
Translates to: VKTVCIFLPIFSQEHEVIAPFKT*QAVAFE
Trigger: TTCGAATGCAACTGCCTGCCAGGTTTTGAAGGGAGC...AATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACACTGTTTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACCACGTTCCTCCATTCTaGCATGGGTTAGAAAGACAC +
Preference number: 4 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYHVPPF*HGLERH
Trigger: GTGTCTTTCTAACCCATGCCAGAATGGAGGAACGTG...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACGGTTCAGACACGGGTTaGAGGCACACTCATCTATAT +
Preference number: 4 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYGSDTG*RHTHLY
Trigger: ATATAGATGAGTGTGCCTCCAACCCGTGTCTGAACC...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AGCAAGTTAGCTTATTTCTTGGACATTCCAACACTCACCCACTTTTCCTACTTTTCATTCATGTCTGTCTaGCACTTGTCCCCTATGAAG +
Preference number: 4 (lower is better)
Translates to: SKLAYFLDIPTLTHFSYFSFMSV*HLSPMK
Trigger: CTTCATAGGGGACAAGTGCCAGACAGACATGAATGA...AAAGTAGGAAAAGTGGGTGAGTGTTGGAATGTCCAAGAAATAAGCTAACTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AGCAAGTTAGCTTATTTCTTGGACATTCCAACACTCACCCACTTTTCCTACTTTGCATTGACATCTGCTTaGCAATTGATCAACTCTGCC +
Preference number: 4 (lower is better)
Translates to: SKLAYFLDIPTLTHFSYFALTSA*QLINSA
Trigger: GGCAGAGTTGATCAATTGCCAAGCAGATGTCAATGC...AAAGTAGGAAAAGTGGGTGAGTGTTGGAATGTCCAAGAAATAAGCTAACTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AGCAAGTTAGCTTATTTCTTGGACATTCCAACACTCACCCACTTTTCCTACTTTGAAAGGATGATAGGTTaGCACAATGGTCTGAGCTAC +
Preference number: 4 (lower is better)
Translates to: SKLAYFLDIPTLTHFSYFERMIG*HNGLSY
Trigger: GTAGCTCAGACCATTGTGCCAACCTATCATCCTTTC...AAAGTAGGAAAAGTGGGTGAGTGTTGGAATGTCCAAGAAATAAGCTAACTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp GTAAAAACAGTGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTGACTCTCCAGTTCACTaGAAACAGACACTAGAGGGT +
Preference number: 4 (lower is better)
Translates to: VKTVCIFLPIFSQEHEVIDSPVH*KQTLEG
Trigger: ACCCTCTAGTGTCTGTTTTCAGTGAACTGGAGAGTC...AATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACACTGTTTTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR TCA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACAAAGGCTGCATGTCATaGAGGTTAGAGAAAGACAGC +
Preference number: 4 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYKGCMS*RLEKDS
Trigger: GCTGTCTTTCTCTAACCTTCATGACATGCAGCCTTT...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACCGTGCATACAAGGGTTaGTGGCACAGTCATCAAAAT +
Preference number: 4 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYRAYKG*WHSHQN
Trigger: ATTTTGATGACTGTGCCAGCAACCCTTGTATGCACG...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR GCA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACCTGTTTGACAGTTCTTaGCTGTGTAAGGCAACATGC +
Preference number: 4 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYLFDSS*LCKATC
Trigger: GCATGTTGCCTTACACAGGCAAGAACTGTCAAACAG...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp GTAAAAACAGTGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTCACTCATTGATATCATaGAGGCAGAAGGGACCAGTG +
Preference number: 4 (lower is better)
Translates to: VKTVCIFLPIFSQEHEVIHSLIS*RQKGPV
Trigger: CACTGGTCCCTTCTGCCTCCATGATATCAATGAGTG...AATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACACTGTTTTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp GTAAAAACAGTGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTCACGAACACTTGAAATaGTTCACAAGGTCGATGCAG +
Preference number: 4 (lower is better)
Translates to: VKTVCIFLPIFSQEHEVIHEHLK*FTRSMQ
Trigger: CTGCATCGACCTTGTGAACCATTTCAAGTGTTCGTG...AATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACACTGTTTTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp AGATATAATGTCACTTTTCAGGGAAATATACACGAGGAAGTTGCCATAGTACCAGTCTTGCTATTCCTCTaGCACTCAAAGTTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: RYNVTFQGNIHEEVAIVPVLLFL*HSKLSN
Trigger: GTTTGACAACTTTGAGTGCCAGAGGAATAGCAAGAC...TGGTACTATGGCAACTTCCTCGTGTATATTTCCCTGAAAAGTGACATTATATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CCA 90 bp GTAAAAACAGTGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTGGTTGTCTTTGAAGTaGTCTGCACAGTATTTGTCA +
Preference number: 4 (lower is better)
Translates to: VKTVCIFLPIFSQEHEVIWLSLK*SAQYLS
Trigger: TGACAAATACTGTGCAGACCACTTCAAAGACAACCA...AATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACACTGTTTTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 90 bp GCACTGCTACTACCTGGGGGCGCGATGTGGTGGTGGGATAGCAGCTaGCTGACCGAGGGGAGCACGGTGCTGGCTCCAGGAGCCAAAGGC +
Preference number: 5 (lower is better)
Translates to: ALLLPGGAMWWWDSS*LTEGSTVLAPGAKG
Trigger: GCCTTTGGCTCCTGGAGCCAGCACCGTGCTCCCCTCGGTCAGCCAGCTGCTATCCCACCACCACATCGCGCCCCCAGGTAGTAGCAGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 90 bp CATCTCTGGGATCTGGTACATAGAGGGCAAGGGGCCTGCAACAGCTaGAGGGCAACTGGACTGCGTCTGGGGAGCTCCGGCTGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: HLWDLVHRGQGACNS*RATGLRLGSSGCLG
Trigger: GCCCAGGCAGCCGGAGCTCCCCAGACGCAGTCCAGTTGCCCTCCAGCTGTTGCAGGCCCCTTGCCCTCTATGTACCAGATCCCAGAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 90 bp TTCGCGAATCCTGCAGCAGCTGTTCAGGGGGCAGGAGCACCACGATaGTCAGGGTGCCCTCTGCCAGGTTCTCAGGCTGGTCCGAAGCGC +
Preference number: 5 (lower is better)
Translates to: FANPAAAVQGAGAPR*SGCPLPGSQAGPKR
Trigger: GCGCTTCGGACCAGCCTGAGAACCTGGCAGAGGGCACCCTGATCATCGTGGTGCTCCTGCCCCCTGAACAGCTGCTGCAGGATTCGCGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 90 bp GAGTCTCGGCGGAGGGTGAACCCTTCCGGCAGCCAGAGGAAGCCATaGTTGCGCTTCCGCTTGGCCATGATGACCCCCAGCAGGATGAAG +
Preference number: 5 (lower is better)
Translates to: ESRRRVNPSGSQRKP*LRFRLAMMTPSRMK
Trigger: CTTCATCCTGCTGGGGGTCATCATGGCCAAGCGGAAGCGCAAGCATGGCTTCCTCTGGCTGCCGGAAGGGTTCACCCTCCGCCGAGACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 90 bp GGGCCTCGGACATTCACGTCCAGCACGTCCACCTCCTGTTCTGCCTaGGGAGGAGTGAGTGCCAGGGATGGAGTGTGGCGGATGTCTGCA +
Preference number: 5 (lower is better)
Translates to: GPRTFTSSTSTSCSA*GGVSARDGVWRMSA
Trigger: TGCAGACATCCGCCACACTCCATCCCTGGCACTCACTCCTCCTCAGGCAGAACAGGAGGTGGACGTGCTGGACGTGAATGTCCGAGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 90 bp TGCCTGAGGAGGAGTGAGTGCCAGGGATGGAGTGTGGCGGATGTCTaGAGCTTCAAGGTGCTGCTGTGTCCAGGGCCGTCGATCGATGGG +
Preference number: 5 (lower is better)
Translates to: CLRRSECQGWSVADV*SFKVLLCPGPSIDG
Trigger: CCCATCGATCGACGGCCCTGGACACAGCAGCACCTTGAAGCTGCAGACATCCGCCACACTCCATCCCTGGCACTCACTCCTCCTCAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 90 bp CGGGTCCCCGCTGACCGCCTCCACCACCTCCAGGAGTTGGGCTGGTaGTCACATCTGACCAGTCAGATGCAGAGTGTGGTGAAGAGCTTG +
Preference number: 5 (lower is better)
Translates to: RVPADRLHHLQELGW*SHLTSQMQSVVKSL
Trigger: CAAGCTCTTCACCACACTCTGCATCTGACTGGTCAGATGTGACCACCAGCCCAACTCCTGGAGGTGGTGGAGGCGGTCAGCGGGGACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 90 bp TTTTTCAGCCCCACGGCATCCTGTCCCACAGGTTCACGGCGCTTGTaGTTGCTAGAGTCTCGGCGGAGGGTGAACCCTTCCGGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: FFSPTASCPTGSRRL*LLESRRRVNPSGSQ
Trigger: CTGGCTGCCGGAAGGGTTCACCCTCCGCCGAGACTCTAGCAATCACAAGCGCCGTGAACCTGTGGGACAGGATGCCGTGGGGCTGAAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 90 bp AGTGCCAGGGATGGAGTGTGGCGGATGTCTGCAGCTTCAAGGTGCTaGTGTGTCCAGGGCCGTCGATCGATGGGGTCATCTTCCGACAGC +
Preference number: 5 (lower is better)
Translates to: SARDGVWRMSAASRC*CVQGRRSMGSSSDS
Trigger: GCTGTCGGAAGATGACCCCATCGATCGACGGCCCTGGACACAGCAGCACCTTGAAGCTGCAGACATCCGCCACACTCCATCCCTGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 90 bp GTGAGTGCCAGGGATGGAGTGTGGCGGATGTCTGCAGCTTCAAGGTaGTGCTGTGTCCAGGGCCGTCGATCGATGGGGTCATCTTCCGAC +
Preference number: 5 (lower is better)
Translates to: VSARDGVWRMSAASR*CCVQGRRSMGSSSD
Trigger: GTCGGAAGATGACCCCATCGATCGACGGCCCTGGACACAGCAGCACCTTGAAGCTGCAGACATCCGCCACACTCCATCCCTGGCACTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 90 bp ATCTGGGCCTCGGACATTCACGTCCAGCACGTCCACCTCCTGTTCTaGCTGAGGAGGAGTGAGTGCCAGGGATGGAGTGTGGCGGATGTC +
Preference number: 5 (lower is better)
Translates to: IWASDIHVQHVHLLF*LRRSECQGWSVADV
Trigger: GACATCCGCCACACTCCATCCCTGGCACTCACTCCTCCTCAGGCAGAACAGGAGGTGGACGTGCTGGACGTGAATGTCCGAGGCCCAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 90 bp CGGAGGTCTGCTCTGGGGAGCTGCTATGCCAGGGTGGGCTCCCTCTaGAGGAGCCAGGACCATGCCAAACATTTCACTGTACTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: RRSALGSCYARVGSL*RSQDHAKHFTVLGL
Trigger: GAGACCCAGTACAGTGAAATGTTTGGCATGGTCCTGGCTCCTGCAGAGGGAGCCCACCCTGGCATAGCAGCTCCCCAGAGCAGACCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp GGTCCCGGAGTAAGGGACTGCCCATCCCCCTTTCTTTTCCTGGACACTACACAGGTGGGCATGGTGCTCTaGGTGTTGGGCCGCCTAGCC +
Preference number: 5 (lower is better)
Translates to: GPGVRDCPSPFLFLDTTQVGMVL*VLGRLA
Trigger: GGCTAGGCGGCCCAACACCAAGAGCACCATGCCCAC...CTGTGTAGTGTCCAGGAAAAGAAAGGGGGATGGGCAGTCCCTTACTCCGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 90 bp CATTCACGTCCAGCACGTCCACCTCCTGTTCTGCCTGAGGAGGAGTaGGTGCCAGGGATGGAGTGTGGCGGATGTCTGCAGCTTCAAGGT +
Preference number: 5 (lower is better)
Translates to: HSRPARPPPVLPEEE*VPGMECGGCLQLQG
Trigger: ACCTTGAAGCTGCAGACATCCGCCACACTCCATCCCTGGCACTCACTCCTCCTCAGGCAGAACAGGAGGTGGACGTGCTGGACGTGAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 90 bp GGGTTCAGGCAGAAGCAGCGAGGTCCCGAGTCAGTGTGGATACACTaGTCCCCTCTCCTGCACTTCACTTGTCCACAGCTGCTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: GFRQKQRGPESVWIH*SPLLHFTCPQLLWH
Trigger: ATGCCAGAGCAGCTGTGGACAAGTGAAGTGCAGGAGAGGGGAGCAGTGTATCCACACTGACTCGGGACCTCGCTGCTTCTGCCTGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 90 bp CCACACGGTTCATCCAGTCTGCTGGGACAGGAACTGGATGTAACCTaGCCAAGCTTCCTGCACTGCTACTACCTGGGGGCGCGATGTGGT +
Preference number: 5 (lower is better)
Translates to: PHGSSSLLGQELDVT*PSFLHCYYLGARCG
Trigger: ACCACATCGCGCCCCCAGGTAGTAGCAGTGCAGGAAGCTTGGGCAGGTTACATCCAGTTCCTGTCCCAGCAGACTGGATGAACCGTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 90 bp TGCAACAGCTGGAGGGCAACTGGACTGCGTCTGGGGAGCTCCGGCTaGCTGGGCAATGCTGCCTTTTGGGATAAGCTGGAAAGTCACGAT +
Preference number: 5 (lower is better)
Translates to: CNSWRATGLRLGSSG*LGNAAFWDKLESHD
Trigger: ATCGTGACTTTCCAGCTTATCCCAAAAGGCAGCATTGCCCAGGCAGCCGGAGCTCCCCAGACGCAGTCCAGTTGCCCTCCAGCTGTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 90 bp CTTCACTTGTCCACAGCTGCTCTGGCATCTCGCCCCAGAGAACCCTaGGGGACAACGACAGATGAAGCCATCGGGCATGTTGCTAGCCAC +
Preference number: 5 (lower is better)
Translates to: LHLSTAALASRPREP*GTTTDEAIGHVASH
Trigger: GTGGCTAGCAACATGCCCGATGGCTTCATCTGTCGTTGTCCCCCAGGGTTCTCTGGGGCGAGATGCCAGAGCAGCTGTGGACAAGTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 90 bp CAGTCCTTGGGGTTCAGGCAGAAGCAGCGAGGTCCCGAGTCAGTGTaGATACACTGCTCCCCTCTCCTGCACTTCACTTGTCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: QSLGFRQKQRGPESV*IHCSPLLHFTCPQL
Trigger: CAGCTGTGGACAAGTGAAGTGCAGGAGAGGGGAGCAGTGTATCCACACTGACTCGGGACCTCGCTGCTTCTGCCTGAACCCCAAGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 90 bp CATCATGGTAGGTGGGAAAGCCACACTGGGCAAACGGGGCATCTCTaGGATCTGGTACATAGAGGGCAAGGGGCCTGCAACAGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: HHGRWESHTGQTGHL*DLVHRGQGACNSWR
Trigger: CCTCCAGCTGTTGCAGGCCCCTTGCCCTCTATGTACCAGATCCCAGAGATGCCCCGTTTGCCCAGTGTGGCTTTCCCACCTACCATGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 90 bp ATGGTGTCAGGTATGGGTGCTCGCCCTGGAGGTGACCACCATGACTaGGGGTTCGCTCAGCAGCATTTGAGGAGGCGTAACTGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: MVSGMGARPGGDHHD*GFAQQHLRRRNCVG
Trigger: CCCAACACAGTTACGCCTCCTCAAATGCTGCTGAGCGAACCCCCAGTCATGGTGGTCACCTCCAGGGCGAGCACCCATACCTGACACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp AAGTTGGCAGTCACTGGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAATGGCAGAGTGGAGGTGCAGTaGGCCCAGGGGTCCTCCATA +
Preference number: 5 (lower is better)
Translates to: KLAVTGSPVPQASSVLNGRVEVQ*AQGSSI
Trigger: TATGGAGGACCCCTGGGCCAACTGCACCTCCACTCT...GCCATTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp GGTCCCGGAGTAAGGGACTGCCCATCCCCCTTTCTTTTCCTGGACACTACACAGTTCCTCCTGCTGCCCTaGGCATCCTTGGCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: GPGVRDCPSPFLFLDTTQFLLLP*ASLASL
Trigger: CAAGGAGGCCAAGGATGCCAAGGGCAGCAGGAGGAA...CTGTGTAGTGTCCAGGAAAAGAAAGGGGGATGGGCAGTCCCTTACTCCGGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp CAGAGAGCGAGGGAAGATGGAGAGAAGGCTTCTCACGCTTGCCTCAGGTTTGGAGGGGGTGTGGGGTACTaGCCCACAGAGGCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: QRAREDGEKASHACLRFGGGVGY*PTEAGK
Trigger: TTTCCCAGCCTCTGTGGGCAAGTACCCCACACCCCC...TCCAAACCTGAGGCAAGCGTGAGAAGCCTTCTCTCCATCTTCCCTCGCTCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 90 bp CCGTGTAGCCCAGGGGGCACTGGCAGTGATGGGTGTTGCCAGCATTaGTACAGATGCCCGAGTGCTGGCACAAGTGTTCAACAGGTACTC +
Preference number: 5 (lower is better)
Translates to: PCSPGGTGSDGCCQH*YRCPSAGTSVQQVL
Trigger: GAGTACCTGTTGAACACTTGTGCCAGCACTCGGGCATCTGTATCAATGCTGGCAACACCCATCACTGCCAGTGCCCCCTGGGCTACACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 90 bp TCCTCCATAGTGAGGGAACAGTCACCTCCATCCCACTGGCAGGCATaGCTATTGCAGGCCTCGTCACAGATGCCATCCCGAGCCTTGTCG +
Preference number: 5 (lower is better)
Translates to: SSIVREQSPPSHWQA*LLQASSQMPSRALS
Trigger: CGACAAGGCTCGGGATGGCATCTGTGACGAGGCCTGCAATAGTCATGCCTGCCAGTGGGATGGAGGTGACTGTTCCCTCACTATGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 90 bp TCCGATGAAGTCATTGCAGGTGGCACCGTGCTGGCATGGATTGGATaGACACTCATCAAGCTGCTCCTCGCAGTAGCTCCCCGTGTAGCC +
Preference number: 5 (lower is better)
Translates to: SDEVIAGGTVLAWIG*TLIKLLLAVAPRVA
Trigger: GGCTACACGGGGAGCTACTGCGAGGAGCAGCTTGATGAGTGTGCATCCAATCCATGCCAGCACGGTGCCACCTGCAATGACTTCATCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 90 bp ATGTTGCTAGCCACGGCACAAGTCCCTCCGTTCAGGCAAGGCTTCTaGGGACACACATCTAGGAAGGTTTCACAGTGCCGGCCCGTGAAG +
Preference number: 5 (lower is better)
Translates to: MLLATAQVPPFRQGF*GHTSRKVSQCRPVK
Trigger: CTTCACGGGCCGGCACTGTGAAACCTTCCTAGATGTGTGTCCCCAGAAGCCTTGCCTGAACGGAGGGACTTGTGCCGTGGCTAGCAACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 90 bp TGTCTGCAGCTTCAAGGTGCTGCTGTGTCCAGGGCCGTCGATCGATaGGGTCATCTTCCGACAGCAAAGCCTCATCCTCAGCCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: CLQLQGAAVSRAVDR*GHLPTAKPHPQPWL
Trigger: AAGCCAAGGCTGAGGATGAGGCTTTGCTGTCGGAAGATGACCCCATCGATCGACGGCCCTGGACACAGCAGCACCTTGAAGCTGCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 90 bp AGAGGACAGGTGAGAGCGCAGAAGTCAAGACCGTTCCCGGAGGGCTaGGAGTCACGTTATACTCGTCCAGGAGGCGAACGATGTCATGGT +
Preference number: 5 (lower is better)
Translates to: RGQVRAQKSRPFPEG*ESRYTRPGGERCHG
Trigger: ACCATGACATCGTTCGCCTCCTGGACGAGTATAACGTGACTCCCAGCCCTCCGGGAACGGTCTTGACTTCTGCGCTCTCACCTGTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 90 bp TCGAGCGAATCGACGGGGGATAGAGTCACTGAGCTCTCGGACAGCTaGACCTTCTCGTTCAGACACTTCTTCCTCCTGCTGCCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: SSESTGDRVTELSDS*TFSFRHFFLLLPLA
Trigger: TGCCAAGGGCAGCAGGAGGAAGAAGTGTCTGAACGAGAAGGTCCAGCTGTCCGAGAGCTCAGTGACTCTATCCCCCGTCGATTCGCTCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp GGTCCCGGAGTAAGGGACTGCCCATCCCCCTTTCTTTTCCTGGACACTACACAGTCCACACACTGCCCGTaGTTCACACACGGGTTGCTC +
Preference number: 5 (lower is better)
Translates to: GPGVRDCPSPFLFLDTTQSTHCP*FTHGLL
Trigger: GAGCAACCCGTGTGTGAACAACGGGCAGTGTGTGGA...CTGTGTAGTGTCCAGGAAAAGAAAGGGGGATGGGCAGTCCCTTACTCCGGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp TCTGGGGTAGGTCCAGTGACCAGACCCAGTGGCTGGATTCTTGGTTACTGTTCGGCATCCTTGGCCTCCTaGGCAAGGTTAGGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: SGVGPVTRPSGWILGYCSASLAS*ARLGRL
Trigger: GAGCCTGCCTAACCTTGCCAAGGAGGCCAAGGATGC...CGAACAGTAACCAAGAATCCAGCCACTGGGTCTGGTCACTGGACCTACCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 90 bp ACAGTTTCCGTGGATGCAGGGATTGCTCAGGCACTCGTTCACCTGTaGGTAGCAGCTAGGATGATGCGGTCCCTCGGGGCATATACACCG +
Preference number: 5 (lower is better)
Translates to: TVSVDAGIAQALVHL*VAARMMRSLGAYTP
Trigger: CGGTGTATATGCCCCGAGGGACCGCATCATCCTAGCTGCTACTCACAGGTGAACGAGTGCCTGAGCAATCCCTGCATCCACGGAAACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 90 bp GGGGATGTGATCATGGGAGAGGATGTGGCATCGGAGACATACGTGTaGGGAGACTCGAGCGAATCGACGGGGGATAGAGTCACTGAGCTC +
Preference number: 5 (lower is better)
Translates to: GDVIMGEDVASETYV*GDSSESTGDRVTEL
Trigger: GAGCTCAGTGACTCTATCCCCCGTCGATTCGCTCGAGTCTCCTCACACGTATGTCTCCGATGCCACATCCTCTCCCATGATCACATCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 90 bp GTAACTGTGTTGGGAAGGGGGTGTGGGGTACTTGCCCACAGAGGCTaGGAAAGGATGATAGGTTGGCACAATGGTCTGAGCTACCTGCCC +
Preference number: 5 (lower is better)
Translates to: VTVLGRGCGVLAHRG*ERMIGWHNGLSYLP
Trigger: GGGCAGGTAGCTCAGACCATTGTGCCAACCTATCATCCTTTCCCAGCCTCTGTGGGCAAGTACCCCACACCCCCTTCCCAACACAGTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 90 bp GCTCAGCAGCATTTGAGGAGGCGTAACTGTGTTGGGAAGGGGGTGTaGGGTACTTGCCCACAGAGGCTGGGAAAGGATGATAGGTTGGCA +
Preference number: 5 (lower is better)
Translates to: AQQHLRRRNCVGKGV*GTCPQRLGKDDRLA
Trigger: TGCCAACCTATCATCCTTTCCCAGCCTCTGTGGGCAAGTACCCCACACCCCCTTCCCAACACAGTTACGCCTCCTCAAATGCTGCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp AAGTTGGCAGTCACTGGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAATGGCTTGTCCACCTCACAGTaGACACCAACCCAGCCTGCA +
Preference number: 5 (lower is better)
Translates to: KLAVTGSPVPQASSVLNGLSTSQ*TPTQPA
Trigger: TGCAGGCTGGGTTGGTGTCAACTGTGAGGTGGACAA...GCCATTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp TCTGGGGTAGGTCCAGTGACCAGACCCAGTGGCTGGATTCTTGGTTACTGTTCGACACACGTGCCGCCATaGAAGCAGGAGCTCTCAGTG +
Preference number: 5 (lower is better)
Translates to: SGVGPVTRPSGWILGYCSTHVPP*KQELSV
Trigger: CACTGAGAGCTCCTGCTTCAATGGCGGCACGTGTGT...CGAACAGTAACCAAGAATCCAGCCACTGGGTCTGGTCACTGGACCTACCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp TCTGGGGTAGGTCCAGTGACCAGACCCAGTGGCTGGATTCTTGGTTACTGTTCGGCCTCATCCTCAGCCTaGGCTTTCTTTGGCTGGGGT +
Preference number: 5 (lower is better)
Translates to: SGVGPVTRPSGWILGYCSASSSA*AFFGWG
Trigger: ACCCCAGCCAAAGAAAGCCAAGGCTGAGGATGAGGC...CGAACAGTAACCAAGAATCCAGCCACTGGGTCTGGTCACTGGACCTACCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp CAGAGAGCGAGGGAAGATGGAGAGAAGGCTTCTCACGCTTGCCTCAGGTTTGGAGGACATCGGCCCATGTaGTCCTGGGCATTTGCATCC +
Preference number: 5 (lower is better)
Translates to: QRAREDGEKASHACLRFGGHRPM*SWAFAS
Trigger: GGATGCAAATGCCCAGGACAACATGGGCCGATGTCC...TCCAAACCTGAGGCAAGCGTGAGAAGCCTTCTCTCCATCTTCCCTCGCTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp CAGAGAGCGAGGGAAGATGGAGAGAAGGCTTCTCACGCTTGCCTCAGGTTTGGAGTCGCCTCCACATTATaGACAGCAGCTGCCCAGTGG +
Preference number: 5 (lower is better)
Translates to: QRAREDGEKASHACLRFGVASTL*TAAAQW
Trigger: CCACTGGGCAGCTGCTGTCAATAATGTGGAGGCGAC...TCCAAACCTGAGGCAAGCGTGAGAAGCCTTCTCTCCATCTTCCCTCGCTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 90 bp CCCCCATTCTTACAGGGCTCGCTCAGACACTCATTCATGTCTGTCTaGCACTTGTCCCCTATGAAGCCAGGATGGCACTGGCAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: PPFLQGSLRHSFMSV*HLSPMKPGWHWQEK
Trigger: CTTCTCCTGCCAGTGCCATCCTGGCTTCATAGGGGACAAGTGCCAGACAGACATGAATGAGTGTCTGAGCGAGCCCTGTAAGAATGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 90 bp GCTCCCTCTGCAGGAGCCAGGACCATGCCAAACATTTCACTGTACTaGGTCTCGTTCATCTCCACACGGTTCATCCAGTCTGCTGGGACA +
Preference number: 5 (lower is better)
Translates to: APSAGARTMPNISLY*VSFISTRFIQSAGT
Trigger: TGTCCCAGCAGACTGGATGAACCGTGTGGAGATGAACGAGACCCAGTACAGTGAAATGTTTGGCATGGTCCTGGCTCCTGCAGAGGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 90 bp ACATCTGACCAGTCAGATGCAGAGTGTGGTGAAGAGCTTGACCATTaGTCAGGAGACTCTGGGGATGGTGTCAGGTATGGGTGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: TSDQSDAECGEELDH*SGDSGDGVRYGCSP
Trigger: GGGCGAGCACCCATACCTGACACCATCCCCAGAGTCTCCTGACCAATGGTCAAGCTCTTCACCACACTCTGCATCTGACTGGTCAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp GGAGACTGTCCCTTCTCCACATCTGGAACCCAAATACAGACTCCACGTCTTCACGGAGGCGTAACTGTGTaGGGAAGGGGGTGTGGGGTA +
Preference number: 5 (lower is better)
Translates to: GDCPFSTSGTQIQTPRLHGGVTV*GRGCGV
Trigger: TACCCCACACCCCCTTCCCAACACAGTTACGCCTCC...GTGAAGACGTGGAGTCTGTATTTGGGTTCCAGATGTGGAGAAGGGACAGTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 90 bp CTCAGGAAGAGACCTGCGTGTCATCTTCTGCTTCTTCATGGCAGCTaGCTTCTCCCCAAAGTAGGGGTACACCATGAGAGCGCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: LRKRPACHLLLLHGS*LLPKVGVHHESALR
Trigger: TCTCAGGGCGCTCTCATGGTGTACCCCTACTTTGGGGAGAAGTCAGCTGCCATGAAGAAGCAGAAGATGACACGCAGGTCTCTTCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 90 bp CATTTGAGGAGGCGTAACTGTGTTGGGAAGGGGGTGTGGGGTACTTaGCCACAGAGGCTGGGAAAGGATGATAGGTTGGCACAATGGTCT +
Preference number: 5 (lower is better)
Translates to: HLRRRNCVGKGVWGT*PQRLGKDDRLAQWS
Trigger: AGACCATTGTGCCAACCTATCATCCTTTCCCAGCCTCTGTGGGCAAGTACCCCACACCCCCTTCCCAACACAGTTACGCCTCCTCAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp CAGAGAGCGAGGGAAGATGGAGAGAAGGCTTCTCACGCTTGCCTCAGGTTTGGAAGACACTGGAAGCGGTaGACTTTGTCCACACACTGC +
Preference number: 5 (lower is better)
Translates to: QRAREDGEKASHACLRFGRHWKR*TLSTHC
Trigger: GCAGTGTGTGGACAAAGTCAACCGCTTCCAGTGTCT...TCCAAACCTGAGGCAAGCGTGAGAAGCCTTCTCTCCATCTTCCCTCGCTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp TGGAACCCAAATACAGACTCCACGTCTTCACTGAGAACCTACTGTGTGTGCACCCCGTGGATGCAGGGATaGCTCAGGCACTCGTTCACC +
Preference number: 5 (lower is better)
Translates to: WNPNTDSTSSLRTYCVCTPWMQG*LRHSFT
Trigger: GGTGAACGAGTGCCTGAGCAATCCCTGCATCCACGG...GGTGCACACACAGTAGGTTCTCAGTGAAGACGTGGAGTCTGTATTTGGGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp GGTCCCGGAGTAAGGGACTGCCCATCCCCCTTTCTTTTCCTGGACACTACACAGTCCTGCATATCTCTGTaGGCCCCATTCTTCAACAGC +
Preference number: 5 (lower is better)
Translates to: GPGVRDCPSPFLFLDTTQSCISL*APFFNS
Trigger: GCTGTTGAAGAATGGGGCCAACAGAGATATGCAGGA...CTGTGTAGTGTCCAGGAAAAGAAAGGGGGATGGGCAGTCCCTTACTCCGGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 90 bp GCTCGCTCAGACACTCATTCATGTCTGTCTGGCACTTGTCCCCTATaGAGCCAGGATGGCACTGGCAGGAGAAGGTATTCACATGGTCCA +
Preference number: 5 (lower is better)
Translates to: ARSDTHSCLSGTCPL*SQDGTGRRRYSHGP
Trigger: TGGACCATGTGAATACCTTCTCCTGCCAGTGCCATCCTGGCTTCATAGGGGACAAGTGCCAGACAGACATGAATGAGTGTCTGAGCGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 90 bp TCACCAGGGTCTGACAGTTTTTCCCGGTGTAGCCCAAGGGACAGATaGATCGGTAGGTACCCAGACCATCAACACACGTTCCAGCATTCA +
Preference number: 5 (lower is better)
Translates to: SPGSDSFSRCSPRDR*IGRYPDHQHTFQHS
Trigger: TGAATGCTGGAACGTGTGTTGATGGTCTGGGTACCTACCGATGCATCTGTCCCTTGGGCTACACCGGGAAAAACTGTCAGACCCTGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 90 bp CGAGTGCTGGCACAAGTGTTCAACAGGTACTCCTTTCTGCAAGGCTaGCGCCTTACAGGACACGTTGAGCACATCACAGTATGCACCATC +
Preference number: 5 (lower is better)
Translates to: RVLAQVFNRYSFLQG*RLTGHVEHITVCTI
Trigger: GATGGTGCATACTGTGATGTGCTCAACGTGTCCTGTAAGGCGGCAGCCTTGCAGAAAGGAGTACCTGTTGAACACTTGTGCCAGCACTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 90 bp CAGATGCCCGAGTGCTGGCACAAGTGTTCAACAGGTACTCCTTTCTaGAAGGCTGCCGCCTTACAGGACACGTTGAGCACATCACAGTAT +
Preference number: 5 (lower is better)
Translates to: QMPECWHKCSTGTPF*KAAALQDTLSTSQY
Trigger: ATACTGTGATGTGCTCAACGTGTCCTGTAAGGCGGCAGCCTTGCAGAAAGGAGTACCTGTTGAACACTTGTGCCAGCACTCGGGCATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp AAGTTGGCAGTCACTGGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAATGGCTCACAATGCACACCTTaGAAACCTGGCATGCACAGA +
Preference number: 5 (lower is better)
Translates to: KLAVTGSPVPQASSVLNGSQCTP*KPGMHR
Trigger: TCTGTGCATGCCAGGTTTCAAAGGTGTGCATTGTGA...GCCATTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp CACATCCCTCCTCCTAAATCCCAAAGGATCCTCTTTGAGGGATCCTTGAAGGAGCCCTTGCGACAGGGGTaGGAGGCACACTCATCAATG +
Preference number: 5 (lower is better)
Translates to: HIPPPKSQRILFEGSLKEPLRQG*EAHSSM
Trigger: CATTGATGAGTGTGCCTCCAACCCCTGTCGCAAGGG...CTCCTTCAAGGATCCCTCAAAGAGGATCCTTTGGGATTTAGGAGGAGGGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp CAGAGAGCGAGGGAAGATGGAGAGAAGGCTTCTCACGCTTGCCTCAGGTTTGGAGGGAGCCAACACTGTTaGACAGTTCTTGCCTGTGTA +
Preference number: 5 (lower is better)
Translates to: QRAREDGEKASHACLRFGGSQHC*TVLACV
Trigger: TACACAGGCAAGAACTGTCAAACAGTGTTGGCTCCC...TCCAAACCTGAGGCAAGCGTGAGAAGCCTTCTCTCCATCTTCCCTCGCTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATCCTCCGATGAAGTCATaGCAGGTGGCACCGTGCTGG +
Preference number: 5 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDPPMKS*QVAPCW
Trigger: CCAGCACGGTGCCACCTGCAATGACTTCATCGGAGG...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp ACATGCAGGGGAGAGAAATTAAGGTGCAGGTTCAGAAGGAGGCTTCTAGTCCCCTCTCCTGCACTTCACTaGTCCACAGCTGCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: TCRGEKLRCRFRRRLLVPSPALH*STAALA
Trigger: TGCCAGAGCAGCTGTGGACAAGTGAAGTGCAGGAGA...GGGGACTAGAAGCCTCCTTCTGAACCTGCACCTTAATTTCTCTCCCCTGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp AAGTTGGCAGTCACTGGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAATGGCTCATCACACTGGTTGTaGATGTATTCCCAGCAGCGA +
Preference number: 5 (lower is better)
Translates to: KLAVTGSPVPQASSVLNGSSHWL*MYSQQR
Trigger: TCGCTGCTGGGAATACATCAACAACCAGTGTGATGA...GCCATTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp GGTCCCGGAGTAAGGGACTGCCCATCCCCCTTTCTTTTCCTGGACACTACACAGTGCTCATCACACTGGTaGTTGATGTATTCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: GPGVRDCPSPFLFLDTTQCSSHW*LMYSQQ
Trigger: CTGCTGGGAATACATCAACAACCAGTGTGATGAGCA...CTGTGTAGTGTCCAGGAAAAGAAAGGGGGATGGGCAGTCCCTTACTCCGGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp TGGAACCCAAATACAGACTCCACGTCTTCACTGAGAACCTACTGTGTGTGCACCAGGCACTCTGCGGTGTaGCACTGCTCATCACACTGG +
Preference number: 5 (lower is better)
Translates to: WNPNTDSTSSLRTYCVCTRHSAV*HCSSHW
Trigger: CCAGTGTGATGAGCAGTGCAACACCGCAGAGTGCCT...GGTGCACACACAGTAGGTTCTCAGTGAAGACGTGGAGTCTGTATTTGGGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp TGGAACCCAAATACAGACTCCACGTCTTCACTGAGAACCTACTGTGTGTGCACCGCATACACCTGCATGTaGCTGTGTGGTGGCTCGGAC +
Preference number: 5 (lower is better)
Translates to: WNPNTDSTSSLRTYCVCTAYTCM*LCGGSD
Trigger: GTCCGAGCCACCACACAGCAACATGCAGGTGTATGC...GGTGCACACACAGTAGGTTCTCAGTGAAGACGTGGAGTCTGTATTTGGGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 90 bp TGTTGGCCCCATTCTTCAACAGCAGAAGAGTCGCCTCCACATTATTaGCAGCAGCTGCCCAGTGGAGGGCAGATTTTCCATGGTCATCCA +
Preference number: 5 (lower is better)
Translates to: CWPHSSTAEESPPHY*QQLPSGGQIFHGHP
Trigger: TGGATGACCATGGAAAATCTGCCCTCCACTGGGCAGCTGCTGTCAATAATGTGGAGGCGACTCTTCTGCTGTTGAAGAATGGGGCCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 90 bp ATGTGCCTGGTTGGCAGTTGCACTGGTAACCATTCACCAGGTCAATaGAGCGCCCATCGTTCAAGCAAGGGCTGCTGTAGCATTCATCAA +
Preference number: 5 (lower is better)
Translates to: MCLVGSCTGNHSPGQ*SAHRSSKGCCSIHQ
Trigger: TTGATGAATGCTACAGCAGCCCTTGCTTGAACGATGGGCGCTGCATTGACCTGGTGAATGGTTACCAGTGCAACTGCCAACCAGGCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp AACCTACTGTGTGTGCACCAGTCTCTCAGATCACACGCTGTGGAAAGAAACTGGGAAGCCCTGAGGACATaGGCATCTGTAGGAACCAGG +
Preference number: 5 (lower is better)
Translates to: NLLCVHQSLRSHAVERNWEALRT*ASVGTR
Trigger: CCTGGTTCCTACAGATGCCAATGTCCTCAGGGCTTC...CCAGTTTCTTTCCACAGCGTGTGATCTGAGAGACTGGTGCACACACAGTAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp CACATCCCTCCTCCTAAATCCCAAAGGATCCTCTTTGAGGGATCCTTGAAGGAGCATTCTCACACGGGTTaGGGGAACAGGGAGCCAACA +
Preference number: 5 (lower is better)
Translates to: HIPPPKSQRILFEGSLKEHSHTG*GNREPT
Trigger: TGTTGGCTCCCTGTTCCCCAAACCCGTGTGAGAATG...CTCCTTCAAGGATCCCTCAAAGAGGATCCTTTGGGATTTAGGAGGAGGGATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATGCATCCAGGAGGCGTTaGGCAGCATCAGCTCTCGAA +
Preference number: 5 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDASRRR*AASALE
Trigger: TTCGAGAGCTGATGCTGCCAAACGCCTCCTGGATGC...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 90 bp CGAGCAGATAGAGAAGCTGGGCGTTTCTTGGACTCTCCAGTTCACTaGAAACAGACACTAGAGGGTAGGATAGGGTCCCTTGGATGGCAT +
Preference number: 5 (lower is better)
Translates to: RADREAGRFLDSPVH*KQTLEGRIGSLGWH
Trigger: ATGCCATCCAAGGGACCCTATCCTACCCTCTAGTGTCTGTTTTCAGTGAACTGGAGAGTCCAAGAAACGCCCAGCTTCTCTATCTGCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 90 bp ATCAACCCAATGTTCACTTGTCCCAGAACCAATCAGGTTAGCCTCTaGCACTTGCACGGAGAGATTTTTCAGCCCCACGGCATCCTGTCC +
Preference number: 5 (lower is better)
Translates to: INPMFTCPRTNQVSL*HLHGEIFQPHGILS
Trigger: GGACAGGATGCCGTGGGGCTGAAAAATCTCTCCGTGCAAGTGTCAGAGGCTAACCTGATTGGTTCTGGGACAAGTGAACATTGGGTTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 90 bp CACTCACAGTGGAAGGCGCCATCTGTATTCACACACTTTCCTGCATaGTCACAAGGGTTACTGTTGGCCATAGCACACTCATCCACGTCT +
Preference number: 5 (lower is better)
Translates to: HSQWKAPSVFTHFPA*SQGLLLAIAHSSTS
Trigger: AGACGTGGATGAGTGTGCTATGGCCAACAGTAACCCTTGTGAGCATGCAGGAAAGTGTGTGAATACAGATGGCGCCTTCCACTGTGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 90 bp AACCATTCACCAGGTCAATGCAGCGCCCATCGTTCAAGCAAGGGCTaGTGTAGCATTCATCAATCTGGTCACTACAGATGGCTCCCATGT +
Preference number: 5 (lower is better)
Translates to: NHSPGQCSAHRSSKG*CSIHQSGHYRWLPC
Trigger: ACATGGGAGCCATCTGTAGTGACCAGATTGATGAATGCTACAGCAGCCCTTGCTTGAACGATGGGCGCTGCATTGACCTGGTGAATGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 90 bp TTGCCAGCCAGGAGCACACAAGCAGCTGAAGCTCTCAAAATTGGGTaGCTCTTTACAAACAGCAGCATTCTCACACGGGTTTGGGGAACA +
Preference number: 5 (lower is better)
Translates to: LPARSTQAAEALKIG*LFTNSSILTRVWGT
Trigger: TGTTCCCCAAACCCGTGTGAGAATGCTGCTGTTTGTAAAGAGGCACCCAATTTTGAGAGCTTCAGCTGCTTGTGTGCTCCTGGCTGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 90 bp TTGTCGATCTCCAGAAATATCTTAGAGCCTATCACCTCCTGCTCCTaGTCCTGCTCCTCAGGAAGAGACCTGCGTGTCATCTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: LSISRNILEPITSCS*SCSSGRDLRVIFCF
Trigger: GAAGCAGAAGATGACACGCAGGTCTCTTCCTGAGGAGCAGGAGCAGGAGCAGGAGGTGATAGGCTCTAAGATATTTCTGGAGATCGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 90 bp AAGTTGTCAAACAGGCACTCTGCGGTGTTGCACTGCTCATCACACTaGTTGTTGATGTATTCCCAGCAGCGAAGAGTGGAGGTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: KLSNRHSAVLHCSSH*LLMYSQQRRVEVQL
Trigger: CAACTGCACCTCCACTCTTCGCTGCTGGGAATACATCAACAACCAGTGTGATGAGCAGTGCAACACCGCAGAGTGCCTGTTTGACAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 90 bp TCTTCCGACAGCAAAGCCTCATCCTCAGCCTTGGCTTTCTTTGGCTaGGGTCCTTCATCATCAACCCAATGTTCACTTGTCCCAGAACCA +
Preference number: 5 (lower is better)
Translates to: SSDSKASSSALAFFG*GPSSSTQCSLVPEP
Trigger: TGGTTCTGGGACAAGTGAACATTGGGTTGATGATGAAGGACCCCAGCCAAAGAAAGCCAAGGCTGAGGATGAGGCTTTGCTGTCGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATTGGAAGCGGTTGACTTaGTCCACACACTGCCCGTTG +
Preference number: 5 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDWKRLT*STHCPL
Trigger: CAACGGGCAGTGTGTGGACAAAGTCAACCGCTTCCA...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp GGAGACTGTCCCTTCTCCACATCTGGAACCCAAATACAGACTCCACGTCTTCACCCATTCACCAGGTTATaGCACGTTCCTCCATTCTGG +
Preference number: 5 (lower is better)
Translates to: GDCPFSTSGTQIQTPRLHPFTRL*HVPPFW
Trigger: CCAGAATGGAGGAACGTGCAATAACCTGGTGAATGG...GTGAAGACGTGGAGTCTGTATTTGGGTTCCAGATGTGGAGAAGGGACAGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp AAGTTGGCAGTCACTGGGTCCCCTGTGCCCCAGGCAAGTTCTGTCCTAAATGGCCTGAAGCTCTCAAAATaGGGTGCCTCTTTACAAACA +
Preference number: 5 (lower is better)
Translates to: KLAVTGSPVPQASSVLNGLKLSK*GASLQT
Trigger: TGTTTGTAAAGAGGCACCCAATTTTGAGAGCTTCAG...GCCATTTAGGACAGAACTTGCCTGGGGCACAGGGGACCCAGTGACTGCCAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp ACATGCAGGGGAGAGAAATTAAGGTGCAGGTTCAGAAGGAGGCTTCTAGTCCCCTTGTGGCAGACACCATaGTTCATACACGGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: TCRGEKLRCRFRRRLLVPLWQTP*FIHGLE
Trigger: CTCCAAGCCGTGTATGAACAATGGTGTCTGCCACAA...GGGGACTAGAAGCCTCCTTCTGAACCTGCACCTTAATTTCTCTCCCCTGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp CACATCCCTCCTCCTAAATCCCAAAGGATCCTCTTTGAGGGATCCTTGAAGGAGATGTCTGTCTGGCACTaGTCCCCTATGAAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: HIPPPKSQRILFEGSLKEMSVWH*SPMKPG
Trigger: TCCTGGCTTCATAGGGGACAAGTGCCAGACAGACAT...CTCCTTCAAGGATCCCTCAAAGAGGATCCTTTGGGATTTAGGAGGAGGGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 90 bp ATTCTTCAACAGCAGAAGAGTCGCCTCCACATTATTGACAGCAGCTaGCCAGTGGAGGGCAGATTTTCCATGGTCATCCACTGCATTGAC +
Preference number: 5 (lower is better)
Translates to: ILQQQKSRLHIIDSS*PVEGRFSMVIHCID
Trigger: GTCAATGCAGTGGATGACCATGGAAAATCTGCCCTCCACTGGGCAGCTGCTGTCAATAATGTGGAGGCGACTCTTCTGCTGTTGAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp ACATGCAGGGGAGAGAAATTAAGGTGCAGGTTCAGAAGGAGGCTTCTAGTCCCCTTGTTCACACACGGGTaGCTCTGGCATTCATTTACC +
Preference number: 5 (lower is better)
Translates to: TCRGEKLRCRFRRRLLVPLFTHG*LWHSFT
Trigger: GGTAAATGAATGCCAGAGCAACCCGTGTGTGAACAA...GGGGACTAGAAGCCTCCTTCTGAACCTGCACCTTAATTTCTCTCCCCTGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp TGGAACCCAAATACAGACTCCACGTCTTCACTGAGAACCTACTGTGTGTGCACCGCCTTACAGGACACGTaGAGCACATCACAGTATGCA +
Preference number: 5 (lower is better)
Translates to: WNPNTDSTSSLRTYCVCTALQDT*STSQYA
Trigger: TGCATACTGTGATGTGCTCAACGTGTCCTGTAAGGC...GGTGCACACACAGTAGGTTCTCAGTGAAGACGTGGAGTCTGTATTTGGGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATGGGGGACACGAACACTaGAAATGGTTCACAAGGTCG +
Preference number: 5 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDGGHEH*KWFTRS
Trigger: CGACCTTGTGAACCATTTCAAGTGTTCGTGTCCCCC...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATTCTGAGCTGCAAGGGTaGGACAGGCATTCGTTGATG +
Preference number: 5 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDSELQG*DRHSLM
Trigger: CATCAACGAATGCCTGTCCAACCCTTGCAGCTCAGA...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp GGAGACTGTCCCTTCTCCACATCTGGAACCCAAATACAGACTCCACGTCTTCACTGGTCATCCACTGCATaGACATCTGCTTGGCAATTG +
Preference number: 5 (lower is better)
Translates to: GDCPFSTSGTQIQTPRLHWSSTA*TSAWQL
Trigger: CAATTGCCAAGCAGATGTCAATGCAGTGGATGACCA...GTGAAGACGTGGAGTCTGTATTTGGGTTCCAGATGTGGAGAAGGGACAGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 90 bp TTGACTTTGTCCACACACTGCCCGTTGTTCACACACGGGTTGCTCTaGCATTCATTTACCTCCAGCTCACAATGCACACCTTTGAAACCT +
Preference number: 5 (lower is better)
Translates to: LTLSTHCPLFTHGLL*HSFTSSSQCTPLKP
Trigger: AGGTTTCAAAGGTGTGCATTGTGAGCTGGAGGTAAATGAATGCCAGAGCAACCCGTGTGTGAACAACGGGCAGTGTGTGGACAAAGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 90 bp TGGTCTGCACAGTATTTGTCATACTTGCACGTCTTGCTATTCCTCTaGCACTCAAAGTTGTCAAACAGGCACTCTGCGGTGTTGCACTGC +
Preference number: 5 (lower is better)
Translates to: WSAQYLSYLHVLLFL*HSKLSNRHSAVLHC
Trigger: GCAGTGCAACACCGCAGAGTGCCTGTTTGACAACTTTGAGTGCCAGAGGAATAGCAAGACGTGCAAGTATGACAAATACTGTGCAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp GGGGCAATTATTAGCCCTATGACTGAGGAGAAAACTATCATCCTAGATTACCACTTGGACAGGCATTCGTaGATGTCCCCCTCACACCGC +
Preference number: 5 (lower is better)
Translates to: GAIISPMTEEKTIILDYHLDRHS*MSPSHR
Trigger: GCGGTGTGAGGGGGACATCAACGAATGCCTGTCCAA...GTGGTAATCTAGGATGATAGTTTTCTCCTCAGTCATAGGGCTAATAATTGCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATTTCGCTCAGCAGCATTaGAGGAGGCGTAACTGTGTT +
Preference number: 5 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDFAQQH*RRRNCV
Trigger: AACACAGTTACGCCTCCTCAAATGCTGCTGAGCGAA...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 90 bp CAACTGTACATCGTTTACCTTGCCAGCCAGGAGCACACAAGCAGCTaGAGCTCTCAAAATTGGGTGCCTCTTTACAAACAGCAGCATTCT +
Preference number: 5 (lower is better)
Translates to: QLYIVYLASQEHTSS*SSQNWVPLYKQQHS
Trigger: AGAATGCTGCTGTTTGTAAAGAGGCACCCAATTTTGAGAGCTTCAGCTGCTTGTGTGCTCCTGGCTGGCAAGGTAAACGATGTACAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 90 bp AGCCACACTCCTCGCTGTTGCATCCCTGATCACAGTGGTTGTCTTTaGAGTGGTCTGCACAGTATTTGTCATACTTGCACGTCTTGCTAT +
Preference number: 5 (lower is better)
Translates to: SHTPRCCIPDHSGCL*SGLHSICHTCTSCY
Trigger: ATAGCAAGACGTGCAAGTATGACAAATACTGTGCAGACCACTTCAAAGACAACCACTGTGATCAGGGATGCAACAGCGAGGAGTGTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 90 bp AGCCAGGAGAGCAGCTGCCGCATCTGTGTTTTTGAAGCACTGGTCTaGATCTTGAACACACTGTCGGTTGTCGATCTCCAGAAATATCTT +
Preference number: 5 (lower is better)
Translates to: SQESSCRICVFEALV*ILNTLSVVDLQKYL
Trigger: AAGATATTTCTGGAGATCGACAACCGACAGTGTGTTCAAGATTCAGACCAGTGCTTCAAAAACACAGATGCGGCAGCTGCTCTCCTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 90 bp CTCGCTGTTGCATCCCTGATCACAGTGGTTGTCTTTGAAGTGGTCTaGACAGTATTTGTCATACTTGCACGTCTTGCTATTCCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: LAVASLITVVVFEVV*TVFVILARLAIPLA
Trigger: TGCCAGAGGAATAGCAAGACGTGCAAGTATGACAAATACTGTGCAGACCACTTCAAAGACAACCACTGTGATCAGGGATGCAACAGCGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 90 bp AAAATTGGGTGCCTCTTTACAAACAGCAGCATTCTCACACGGGTTTaGGGAACAGGGAGCCAACACTGTTTGACAGTTCTTGCCTGTGTA +
Preference number: 5 (lower is better)
Translates to: KIGCLFTNSSILTRV*GTGSQHCLTVLACV
Trigger: TACACAGGCAAGAACTGTCAAACAGTGTTGGCTCCCTGTTCCCCAAACCCGTGTGAGAATGCTGCTGTTTGTAAAGAGGCACCCAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp CACATCCCTCCTCCTAAATCCCAAAGGATCCTCTTTGAGGGATCCTTGAAGGAGAAGCAAGAGAAAGAGTaGATTCCATCAACACACGTG +
Preference number: 5 (lower is better)
Translates to: HIPPPKSQRILFEGSLKEKQEKE*IPSTHV
Trigger: CACGTGTGTTGATGGAATCAACTCTTTCTCTTGCTT...CTCCTTCAAGGATCCCTCAAAGAGGATCCTTTGGGATTTAGGAGGAGGGATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATTGGTCTGCACAGTATTaGTCATACTTGCACGTCTTG +
Preference number: 5 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDWSAQY*SYLHVL
Trigger: CAAGACGTGCAAGTATGACAAATACTGTGCAGACCA...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATTCACAGTGGTTGTCTTaGAAGTGGTCTGCACAGTAT +
Preference number: 5 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDSQWLS*KWSAQY
Trigger: ATACTGTGCAGACCACTTCAAAGACAACCACTGTGA...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp AGCAAGTTAGCTTATTTCTTGGACATTCCAACACTCACCCACTTTTCCTACTTTGCGGTCTGTCTGTGCTaGAAGGCTGGCACCTTGGTA +
Preference number: 5 (lower is better)
Translates to: SKLAYFLDIPTLTHFSYFAVCLC*KAGTLV
Trigger: TACCAAGGTGCCAGCCTTCAAGCACAGACAGACCGC...AAAGTAGGAAAAGTGGGTGAGTGTTGGAATGTCCAAGAAATAAGCTAACTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACCACCACCTCCAGGAGTaGGGCTGGTGGTCACATCTG +
Preference number: 5 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYHHLQE*GWWSHL
Trigger: CAGATGTGACCACCAGCCCAACTCCTGGAGGTGGTG...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp GGGGCAATTATTAGCCCTATGACTGAGGAGAAAACTATCATCCTAGATTACCACCCGTGCATACAAGGGTaGCTGGCACAGTCATCAAAA +
Preference number: 5 (lower is better)
Translates to: GAIISPMTEEKTIILDYHPCIQG*LAQSSK
Trigger: TTTTGATGACTGTGCCAGCAACCCTTGTATGCACGG...GTGGTAATCTAGGATGATAGTTTTCTCCTCAGTCATAGGGCTAATAATTGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATTCATCAATGTCAATATaGCACCTCTGGCCTGTGAAT +
Preference number: 5 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDSSMSI*HLWPVN
Trigger: ATTCACAGGCCAGAGGTGCAATATTGACATTGATGA...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp TCTCTTCATTTCTCTCCGGATAACCTTCACTCGCCCCTCAGCAGTATGTGTGATCAGTATTTGTCATACTaGCACGTCTTGCTATTCCTC +
Preference number: 5 (lower is better)
Translates to: SLHFSPDNLHSPLSSMCDQYLSY*HVLLFL
Trigger: GAGGAATAGCAAGACGTGCAAGTATGACAAATACTG...ATCACACATACTGCTGAGGGGCGAGTGAAGGTTATCCGGAGAGAAATGAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACTGGGTGTTGCCAGCATaGATACAGATGCCCGAGTGC +
Preference number: 5 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYWVLPA*IQMPEC
Trigger: GCACTCGGGCATCTGTATCAATGCTGGCAACACCCA...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp AGATATAATGTCACTTTTCAGGGAAATATACACGAGGAAGTTGCCATAGTACCATGTTTAATGCGCAAGTaGGTGTGGAGCAGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: RYNVTFQGNIHEEVAIVPCLMRK*VWSRVP
Trigger: GGGCACCCTGCTCCACACCAACTTGCGCATTAAACA...TGGTACTATGGCAACTTCCTCGTGTATATTTCCCTGAAAAGTGACATTATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp GGGGCAATTATTAGCCCTATGACTGAGGAGAAAACTATCATCCTAGATTACCACGGAAAGGATGATAGGTaGGCACAATGGTCTGAGCTA +
Preference number: 5 (lower is better)
Translates to: GAIISPMTEEKTIILDYHGKDDR*AQWSEL
Trigger: TAGCTCAGACCATTGTGCCAACCTATCATCCTTTCC...GTGGTAATCTAGGATGATAGTTTTCTCCTCAGTCATAGGGCTAATAATTGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACACAGACAGTGGGGCCTaGCCTTTTCCTGAACACAAG +
Preference number: 5 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYTDSGA*PFPEHK
Trigger: CTTGTGTTCAGGAAAAGGCAAGGCCCCACTGTCTGT...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp AGCAAGTTAGCTTATTTCTTGGACATTCCAACACTCACCCACTTTTCCTACTTTAGTGTGGTGAAGAGCTaGACCATTGGTCAGGAGACT +
Preference number: 5 (lower is better)
Translates to: SKLAYFLDIPTLTHFSYFSVVKS*TIGQET
Trigger: AGTCTCCTGACCAATGGTCAAGCTCTTCACCACACT...AAAGTAGGAAAAGTGGGTGAGTGTTGGAATGTCCAAGAAATAAGCTAACTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp AGATATAATGTCACTTTTCAGGGAAATATACACGAGGAAGTTGCCATAGTACCATGGTTCAGACACGGGTaGGAGGCACACTCATCTATA +
Preference number: 5 (lower is better)
Translates to: RYNVTFQGNIHEEVAIVPWFRHG*EAHSSI
Trigger: TATAGATGAGTGTGCCTCCAACCCGTGTCTGAACCA...TGGTACTATGGCAACTTCCTCGTGTATATTTCCCTGAAAAGTGACATTATATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACATCAAAGCAGGTTCCTaGGTTCAGACACGGGTTGGA +
Preference number: 5 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYIKAGS*VQTRVG
Trigger: TCCAACCCGTGTCTGAACCAAGGAACCTGCTTTGAT...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACTGTACATCGTTTACCTaGCCAGCCAGGAGCACACAA +
Preference number: 5 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYCTSFT*PARSTQ
Trigger: TTGTGTGCTCCTGGCTGGCAAGGTAAACGATGTACA...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp AGATATAATGTCACTTTTCAGGGAAATATACACGAGGAAGTTGCCATAGTACCATTGAAGGCTGGCACCTaGGTAGACCAAGTCTGTGAT +
Preference number: 5 (lower is better)
Translates to: RYNVTFQGNIHEEVAIVPLKAGT*VDQVCD
Trigger: ATCACAGACTTGGTCTACCAAGGTGCCAGCCTTCAA...TGGTACTATGGCAACTTCCTCGTGTATATTTCCCTGAAAAGTGACATTATATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp GTAAAAACAGTGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTGGATCTGGGTCACAGTaGTCGATGTTCTCATCACAC +
Preference number: 5 (lower is better)
Translates to: VKTVCIFLPIFSQEHEVIGSGSQ*SMFSSH
Trigger: GTGTGATGAGAACATCGACAACTGTGACCCAGATCC...AATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACACTGTTTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp AGATATAATGTCACTTTTCAGGGAAATATACACGAGGAAGTTGCCATAGTACCAGCCGCATCTGTGTTTTaGAAGCACTGGTCTGAATCT +
Preference number: 5 (lower is better)
Translates to: RYNVTFQGNIHEEVAIVPAASVF*KHWSES
Trigger: AGATTCAGACCAGTGCTTCAAAAACACAGATGCGGC...TGGTACTATGGCAACTTCCTCGTGTATATTTCCCTGAAAAGTGACATTATATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp GTAAAAACAGTGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTAAACCATTCACATCATaGATGCACGTCGCACCCTTG +
Preference number: 5 (lower is better)
Translates to: VKTVCIFLPIFSQEHEVIKPFTS*MHVAPL
Trigger: CAAGGGTGCGACGTGCATCAATGATGTGAATGGTTT...AATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACACTGTTTTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACTTGTTCATACACGGCTaGGAGATACACTCATCAACG +
Preference number: 5 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYLFIHG*EIHSST
Trigger: CGTTGATGAGTGTATCTCCAAGCCGTGTATGAACAA...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp GTAAAAACAGTGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTGGCAAGGCAATCATaGATGTCCTCTTCACAGTCC +
Preference number: 5 (lower is better)
Translates to: VKTVCIFLPIFSQEHEVILARQS*MSSSQS
Trigger: GGACTGTGAAGAGGACATCAATGATTGCCTTGCCAA...AATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACACTGTTTTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp TGTGCATATTCCTTCCTATATTTAGTCAGGAACACGAAGTCATTTTCTGGTTACTTAGAGCTGCACTCATaGATATCATGGAGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: CAYSFLYLVRNTKSFSGYLELHS*ISWRQK
Trigger: CTTCTGCCTCCATGATATCAATGAGTGCAGCTCTAA...GTAACCAGAAAATGACTTCGTGTTCCTGACTAAATATAGGAAGGAATATGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS-3UTR CAA 90 bp AGATATAATGTCACTTTTCAGGGAAATATACACGAGGAAGTTGCCATAGTACCAACATCTGCTTGGCAATaGATCAACTCTGCCACCATT +
Preference number: 5 (lower is better)
Translates to: RYNVTFQGNIHEEVAIVPTSAWQ*INSATI
Trigger: AATGGTGGCAGAGTTGATCAATTGCCAAGCAGATGT...TGGTACTATGGCAACTTCCTCGTGTATATTTCCCTGAAAAGTGACATTATATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 72 bp CTGGGGGCGCGATGTGGTGGTGGGATAGCAGCTGGCTaGCCGAGGGGAGCACGGTGCTGGCTCCAGGAGCCA +
Preference number: 6 (lower is better)
Translates to: LGARCGGGIAAG*PRGARCWLQEP
Trigger: TGGCTCCTGGAGCCAGCACCGTGCTCCCCTCGGTCAGCCAGCTGCTATCCCACCACCACATCGCGCCCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp CTACCTGGGGGCGCGATGTGGTGGTGGGATAGCAGCTaGCTGACCGAGGGGAGCACGGTGCTGGCTCCAGGA +
Preference number: 6 (lower is better)
Translates to: LPGGAMWWWDSS*LTEGSTVLAPG
Trigger: TCCTGGAGCCAGCACCGTGCTCCCCTCGGTCAGCCAGCTGCTATCCCACCACCACATCGCGCCCCCAGGTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp CCCGCTGGGTGGACATGTGCTTCCCTTCCGGAGGTCTaGTCTGGGGAGCTGCTATGCCAGGGTGGGCTCCCT +
Preference number: 6 (lower is better)
Translates to: PAGWTCASLPEV*SGELLCQGGLP
Trigger: AGGGAGCCCACCCTGGCATAGCAGCTCCCCAGAGCAGACCTCCGGAAGGGAAGCACATGTCCACCCAGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp CCTGCACTGCTACTACCTGGGGGCGCGATGTGGTGGTaGGATAGCAGCTGGCTGACCGAGGGGAGCACGGTG +
Preference number: 6 (lower is better)
Translates to: PALLLPGGAMWW*DSSWLTEGSTV
Trigger: CACCGTGCTCCCCTCGGTCAGCCAGCTGCTATCCCACCACCACATCGCGCCCCCAGGTAGTAGCAGTGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp ACGATGGGAGGCAAGGGCTCCCGCTGGGTGGACATGTaGTTCCCTTCCGGAGGTCTGCTCTGGGGAGCTGCT +
Preference number: 6 (lower is better)
Translates to: TMGGKGSRWVDM*FPSGGLLWGAA
Trigger: AGCAGCTCCCCAGAGCAGACCTCCGGAAGGGAAGCACATGTCCACCCAGCGGGAGCCCTTGCCTCCCATCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp AGGGTGCCCAGGGCCCTCAAGAAGCTTCGCGAATCCTaGAGCAGCTGTTCAGGGGGCAGGAGCACCACGATG +
Preference number: 6 (lower is better)
Translates to: RVPRALKKLRES*SSCSGGRSTTM
Trigger: CATCGTGGTGCTCCTGCCCCCTGAACAGCTGCTGCAGGATTCGCGAAGCTTCTTGAGGGCCCTGGGCACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp ACGATGATCAGGGTGCCCTCTGCCAGGTTCTCAGGCTaGTCCGAAGCGCAGTCCAGCCCATCCCAGCCACAC +
Preference number: 6 (lower is better)
Translates to: TMIRVPSARFSG*SEAQSSPSQPH
Trigger: GTGTGGCTGGGATGGGCTGGACTGCGCTTCGGACCAGCCTGAGAACCTGGCAGAGGGCACCCTGATCATCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp AAGCTTCCTGCACTGCTACTACCTGGGGGCGCGATGTaGTGGTGGGATAGCAGCTGGCTGACCGAGGGGAGC +
Preference number: 6 (lower is better)
Translates to: KLPALLLPGGAM*WWDSSWLTEGS
Trigger: GCTCCCCTCGGTCAGCCAGCTGCTATCCCACCACCACATCGCGCCCCCAGGTAGTAGCAGTGCAGGAAGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp GATCTGGTACATAGAGGGCAAGGGGCCTGCAACAGCTaGAGGGCAACTGGACTGCGTCTGGGGAGCTCCGGC +
Preference number: 6 (lower is better)
Translates to: DLVHRGQGACNS*RATGLRLGSSG
Trigger: GCCGGAGCTCCCCAGACGCAGTCCAGTTGCCCTCCAGCTGTTGCAGGCCCCTTGCCCTCTATGTACCAGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 72 bp AGGGTGAACCCTTCCGGCAGCCAGAGGAAGCCATGCTaGCGCTTCCGCTTGGCCATGATGACCCCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: RVNPSGSQRKPC*RFRLAMMTPSR
Trigger: CCTGCTGGGGGTCATCATGGCCAAGCGGAAGCGCAAGCATGGCTTCCTCTGGCTGCCGGAAGGGTTCACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 90 bp TCTCGGCGGAGGGTGAACCCTTCCGGCAGCCAGAGGAAGCCATGCTaGCGCTTCCGCTTGGCCATGATGACCCCCAGCAGGATGAAGAAC +
Preference number: 6 (lower is better)
Translates to: SRRRVNPSGSQRKPC*RFRLAMMTPSRMKN
Trigger: GTTCTTCATCCTGCTGGGGGTCATCATGGCCAAGCGGAAGCGCAAGCATGGCTTCCTCTGGCTGCCGGAAGGGTTCACCCTCCGCCGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 90 bp TGTGTGTTCCGGGTCCCCGCTGACCGCCTCCACCACCTCCAGGAGTaGGGCTGGTGGTCACATCTGACCAGTCAGATGCAGAGTGTGGTG +
Preference number: 6 (lower is better)
Translates to: CVFRVPADRLHHLQE*GWWSHLTSQMQSVV
Trigger: CACCACACTCTGCATCTGACTGGTCAGATGTGACCACCAGCCCAACTCCTGGAGGTGGTGGAGGCGGTCAGCGGGGACCCGGAACACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 72 bp CCCACGGCATCCTGTCCCACAGGTTCACGGCGCTTGTaGTTGCTAGAGTCTCGGCGGAGGGTGAACCCTTCC +
Preference number: 6 (lower is better)
Translates to: PTASCPTGSRRL*LLESRRRVNPS
Trigger: GGAAGGGTTCACCCTCCGCCGAGACTCTAGCAATCACAAGCGCCGTGAACCTGTGGGACAGGATGCCGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp GGCAGGGGTTACTGGCACATCCTGACTCGCAGTCCTTaGGGTTCAGGCAGAAGCAGCGAGGTCCCGAGTCAG +
Preference number: 6 (lower is better)
Translates to: GRGYWHILTRSP*GSGRSSEVPSQ
Trigger: CTGACTCGGGACCTCGCTGCTTCTGCCTGAACCCCAAGGACTGCGAGTCAGGATGTGCCAGTAACCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp CGTTGGGCTGCAACAGACACTCGTCCACATCTTCTGTaGAGAACTGCCCAGTCCACTGAGGGGGACAGCGGC +
Preference number: 6 (lower is better)
Translates to: RWAATDTRPHLL*RTAQSTEGDSG
Trigger: GCCGCTGTCCCCCTCAGTGGACTGGGCAGTTCTGCACAGAAGATGTGGACGAGTGTCTGTTGCAGCCCAACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp TGGAGGGCAACTGGACTGCGTCTGGGGAGCTCCGGCTaGCTGGGCAATGCTGCCTTTTGGGATAAGCTGGAA +
Preference number: 6 (lower is better)
Translates to: WRATGLRLGSSG*LGNAAFWDKLE
Trigger: TTCCAGCTTATCCCAAAAGGCAGCATTGCCCAGGCAGCCGGAGCTCCCCAGACGCAGTCCAGTTGCCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp GGTATGGGTGCTCGCCCTGGAGGTGACCACCATGACTaGGGGTTCGCTCAGCAGCATTTGAGGAGGCGTAAC +
Preference number: 6 (lower is better)
Translates to: GMGARPGGDHHD*GFAQQHLRRRN
Trigger: GTTACGCCTCCTCAAATGCTGCTGAGCGAACCCCCAGTCATGGTGGTCACCTCCAGGGCGAGCACCCATACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 72 bp TCCGGCAGCCAGAGGAAGCCATGCTTGCGCTTCCGCTaGGCCATGATGACCCCCAGCAGGATGAAGAACAGG +
Preference number: 6 (lower is better)
Translates to: SGSQRKPCLRFR*AMMTPSRMKNR
Trigger: CCTGTTCTTCATCCTGCTGGGGGTCATCATGGCCAAGCGGAAGCGCAAGCATGGCTTCCTCTGGCTGCCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 72 bp AGGTTAGGCAGGCTCGTGGGCATGGTGCTCTTGGTGTaGGGCCGCCTAGCCTTCTTACCCATTGGGGTGTGC +
Preference number: 6 (lower is better)
Translates to: RLGRLVGMVLLV*GRLAFLPIGVC
Trigger: GCACACCCCAATGGGTAAGAAGGCTAGGCGGCCCAACACCAAGAGCACCATGCCCACGAGCCTGCCTAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 90 bp CCAGAGAACCCTGGGGGACAACGACAGATGAAGCCATCGGGCATGTaGCTAGCCACGGCACAAGTCCCTCCGTTCAGGCAAGGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: PENPGGQRQMKPSGM*LATAQVPPFRQGFW
Trigger: CCAGAAGCCTTGCCTGAACGGAGGGACTTGTGCCGTGGCTAGCAACATGCCCGATGGCTTCATCTGTCGTTGTCCCCCAGGGTTCTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 90 bp TTGGCCTCCTTGGCAAGGTTAGGCAGGCTCGTGGGCATGGTGCTCTaGGTGTTGGGCCGCCTAGCCTTCTTACCCATTGGGGTGTGCTTC +
Preference number: 6 (lower is better)
Translates to: LASLARLGRLVGMVL*VLGRLAFLPIGVCF
Trigger: GAAGCACACCCCAATGGGTAAGAAGGCTAGGCGGCCCAACACCAAGAGCACCATGCCCACGAGCCTGCCTAACCTTGCCAAGGAGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 72 bp GTGGATGCAGGGATTGCTCAGGCACTCGTTCACCTGTaGGTAGCAGCTAGGATGATGCGGTCCCTCGGGGCA +
Preference number: 6 (lower is better)
Translates to: VDAGIAQALVHL*VAARMMRSLGA
Trigger: TGCCCCGAGGGACCGCATCATCCTAGCTGCTACTCACAGGTGAACGAGTGCCTGAGCAATCCCTGCATCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 72 bp GTGACCACCATGACTGGGGGTTCGCTCAGCAGCATTTaGGGAGGCGTAACTGTGTTGGGAAGGGGGTGTGGG +
Preference number: 6 (lower is better)
Translates to: VTTMTGGSLSSI*GGVTVLGRGCG
Trigger: CCCACACCCCCTTCCCAACACAGTTACGCCTCCTCAAATGCTGCTGAGCGAACCCCCAGTCATGGTGGTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp GGCTTCTGGGGACACACATCTAGGAAGGTTTCACAGTaGCGGCCCGTGAAGGCGCTGCGGCAGATACAGTTG +
Preference number: 6 (lower is better)
Translates to: GFWGHTSRKVSQ*RPVKALRQIQL
Trigger: CAACTGTATCTGCCGCAGCGCCTTCACGGGCCGGCACTGTGAAACCTTCCTAGATGTGTGTCCCCAGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp GATGGAGTGTGGCGGATGTCTGCAGCTTCAAGGTGCTaGTGTGTCCAGGGCCGTCGATCGATGGGGTCATCT +
Preference number: 6 (lower is better)
Translates to: DGVWRMSAASRC*CVQGRRSMGSS
Trigger: AGATGACCCCATCGATCGACGGCCCTGGACACAGCAGCACCTTGAAGCTGCAGACATCCGCCACACTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp TCGGACATTCACGTCCAGCACGTCCACCTCCTGTTCTaGCTGAGGAGGAGTGAGTGCCAGGGATGGAGTGTG +
Preference number: 6 (lower is better)
Translates to: SDIHVQHVHLLF*LRRSECQGWSV
Trigger: CACACTCCATCCCTGGCACTCACTCCTCCTCAGGCAGAACAGGAGGTGGACGTGCTGGACGTGAATGTCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp GCTCTGGGGAGCTGCTATGCCAGGGTGGGCTCCCTCTaGAGGAGCCAGGACCATGCCAAACATTTCACTGTA +
Preference number: 6 (lower is better)
Translates to: ALGSCYARVGSL*RSQDHAKHFTV
Trigger: TACAGTGAAATGTTTGGCATGGTCCTGGCTCCTGCAGAGGGAGCCCACCCTGGCATAGCAGCTCCCCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp CCAATCCGGTCCACGCACTGGCCACCGTTAAGGCAGTaGGGGCCCCCAGCACATTCATCGATGTTCTCTTCA +
Preference number: 6 (lower is better)
Translates to: PIRSTHWPPLRQ*GPPAHSSMFSS
Trigger: TGAAGAGAACATCGATGAATGTGCTGGGGGCCCCCACTGCCTTAACGGTGGCCAGTGCGTGGACCGGATTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp GCCACGGCACAAGTCCCTCCGTTCAGGCAAGGCTTCTaGGGACACACATCTAGGAAGGTTTCACAGTGCCGG +
Preference number: 6 (lower is better)
Translates to: ATAQVPPFRQGF*GHTSRKVSQCR
Trigger: CCGGCACTGTGAAACCTTCCTAGATGTGTGTCCCCAGAAGCCTTGCCTGAACGGAGGGACTTGTGCCGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp TCCACAGCTGCTCTGGCATCTCGCCCCAGAGAACCCTaGGGGACAACGACAGATGAAGCCATCGGGCATGTT +
Preference number: 6 (lower is better)
Translates to: STAALASRPREP*GTTTDEAIGHV
Trigger: AACATGCCCGATGGCTTCATCTGTCGTTGTCCCCCAGGGTTCTCTGGGGCGAGATGCCAGAGCAGCTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp GTGAGAGCGCAGAAGTCAAGACCGTTCCCGGAGGGCTaGGAGTCACGTTATACTCGTCCAGGAGGCGAACGA +
Preference number: 6 (lower is better)
Translates to: VRAQKSRPFPEG*ESRYTRPGGER
Trigger: TCGTTCGCCTCCTGGACGAGTATAACGTGACTCCCAGCCCTCCGGGAACGGTCTTGACTTCTGCGCTCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp AGGTGGGAAAGCCACACTGGGCAAACGGGGCATCTCTaGGATCTGGTACATAGAGGGCAAGGGGCCTGCAAC +
Preference number: 6 (lower is better)
Translates to: RWESHTGQTGHL*DLVHRGQGACN
Trigger: GTTGCAGGCCCCTTGCCCTCTATGTACCAGATCCCAGAGATGCCCCGTTTGCCCAGTGTGGCTTTCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 72 bp CCTGGGGGACAACGACAGATGAAGCCATCGGGCATGTaGCTAGCCACGGCACAAGTCCCTCCGTTCAGGCAA +
Preference number: 6 (lower is better)
Translates to: PGGQRQMKPSGM*LATAQVPPFRQ
Trigger: TTGCCTGAACGGAGGGACTTGTGCCGTGGCTAGCAACATGCCCGATGGCTTCATCTGTCGTTGTCCCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 72 bp GGTGACCACCATGACTGGGGGTTCGCTCAGCAGCATTaGAGGAGGCGTAACTGTGTTGGGAAGGGGGTGTGG +
Preference number: 6 (lower is better)
Translates to: GDHHDWGFAQQH*RRRNCVGKGVW
Trigger: CCACACCCCCTTCCCAACACAGTTACGCCTCCTCAAATGCTGCTGAGCGAACCCCCAGTCATGGTGGTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 90 bp TCCTTGGCAAGGTTAGGCAGGCTCGTGGGCATGGTGCTCTTGGTGTaGGGCCGCCTAGCCTTCTTACCCATTGGGGTGTGCTTCAGACTG +
Preference number: 6 (lower is better)
Translates to: SLARLGRLVGMVLLV*GRLAFLPIGVCFRL
Trigger: CAGTCTGAAGCACACCCCAATGGGTAAGAAGGCTAGGCGGCCCAACACCAAGAGCACCATGCCCACGAGCCTGCCTAACCTTGCCAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 90 bp GTGAACCCTTCCGGCAGCCAGAGGAAGCCATGCTTGCGCTTCCGCTaGGCCATGATGACCCCCAGCAGGATGAAGAACAGGATGATGACA +
Preference number: 6 (lower is better)
Translates to: VNPSGSQRKPCLRFR*AMMTPSRMKNRMMT
Trigger: TGTCATCATCCTGTTCTTCATCCTGCTGGGGGTCATCATGGCCAAGCGGAAGCGCAAGCATGGCTTCCTCTGGCTGCCGGAAGGGTTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 72 bp GTGAGGGAACAGTCACCTCCATCCCACTGGCAGGCATaGCTATTGCAGGCCTCGTCACAGATGCCATCCCGA +
Preference number: 6 (lower is better)
Translates to: VREQSPPSHWQA*LLQASSQMPSR
Trigger: TCGGGATGGCATCTGTGACGAGGCCTGCAATAGTCATGCCTGCCAGTGGGATGGAGGTGACTGTTCCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp GTCATTGCAGGTGGCACCGTGCTGGCATGGATTGGATaGACACTCATCAAGCTGCTCCTCGCAGTAGCTCCC +
Preference number: 6 (lower is better)
Translates to: VIAGGTVLAWIG*TLIKLLLAVAP
Trigger: GGGAGCTACTGCGAGGAGCAGCTTGATGAGTGTGCATCCAATCCATGCCAGCACGGTGCCACCTGCAATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp CAGAAGCAGCGAGGTCCCGAGTCAGTGTGGATACACTaGTCCCCTCTCCTGCACTTCACTTGTCCACAGCTG +
Preference number: 6 (lower is better)
Translates to: QKQRGPESVWIH*SPLLHFTCPQL
Trigger: CAGCTGTGGACAAGTGAAGTGCAGGAGAGGGGAGCAGTGTATCCACACTGACTCGGGACCTCGCTGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp ACTGGCAGGCATGACTATTGCAGGCCTCGTCACAGATaGCATCCCGAGCCTTGTCGGCGCAGTACTGACTCT +
Preference number: 6 (lower is better)
Translates to: TGRHDYCRPRHR*HPEPCRRSTDS
Trigger: AGAGTCAGTACTGCGCCGACAAGGCTCGGGATGGCATCTGTGACGAGGCCTGCAATAGTCATGCCTGCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp GTTGCGGATCAGAATCTGAAAGACACCTTGGGCGTCTaGTGCCACCGCAGCGTGAAGAGGACATCGGCCCAT +
Preference number: 6 (lower is better)
Translates to: VADQNLKDTLGV*CHRSVKRTSAH
Trigger: ATGGGCCGATGTCCTCTTCACGCTGCGGTGGCAGCAGACGCCCAAGGTGTCTTTCAGATTCTGATCCGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp GTGTTGGGCCGCCTAGCCTTCTTACCCATTGGGGTGTaGTTCAGACTGAGGAAAGACCTGTTGGGCCCACAG +
Preference number: 6 (lower is better)
Translates to: VLGRLAFLPIGV*FRLRKDLLGPQ
Trigger: CTGTGGGCCCAACAGGTCTTTCCTCAGTCTGAAGCACACCCCAATGGGTAAGAAGGCTAGGCGGCCCAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp CAGGAACTGGATGTAACCTGCCCAAGCTTCCTGCACTaGTACTACCTGGGGGCGCGATGTGGTGGTGGGATA +
Preference number: 6 (lower is better)
Translates to: QELDVTCPSFLH*YYLGARCGGGI
Trigger: TATCCCACCACCACATCGCGCCCCCAGGTAGTAGCAGTGCAGGAAGCTTGGGCAGGTTACATCCAGTTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp GGGTTCAGGCAGAAGCAGCGAGGTCCCGAGTCAGTGTaGATACACTGCTCCCCTCTCCTGCACTTCACTTGT +
Preference number: 6 (lower is better)
Translates to: GFRQKQRGPESV*IHCSPLLHFTC
Trigger: ACAAGTGAAGTGCAGGAGAGGGGAGCAGTGTATCCACACTGACTCGGGACCTCGCTGCTTCTGCCTGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp CCACAGAGGCTGGGAAAGGATGATAGGTTGGCACAATaGTCTGAGCTACCTGCCCCTCCTGCTGGGGCATCA +
Preference number: 6 (lower is better)
Translates to: PQRLGKDDRLAQ*SELPAPPAGAS
Trigger: TGATGCCCCAGCAGGAGGGGCAGGTAGCTCAGACCATTGTGCCAACCTATCATCCTTTCCCAGCCTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 90 bp CACTGGTTGTTGATGTATTCCCAGCAGCGAAGAGTGGAGGTGCAGTaGGCCCAGGGGTCCTCCATAGTGAGGGAACAGTCACCTCCATCC +
Preference number: 6 (lower is better)
Translates to: HWLLMYSQQRRVEVQ*AQGSSIVREQSPPS
Trigger: GGATGGAGGTGACTGTTCCCTCACTATGGAGGACCCCTGGGCCAACTGCACCTCCACTCTTCGCTGCTGGGAATACATCAACAACCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 90 bp CTTCTCCCCAAAGTAGGGGTACACCATGAGAGCGCCCTGAGAATCTaGTTTAATGCGCAAGTTGGTGTGGAGCAGGGTGCCCAGGGCCCT +
Preference number: 6 (lower is better)
Translates to: LLPKVGVHHESALRI*FNAQVGVEQGAQGP
Trigger: AGGGCCCTGGGCACCCTGCTCCACACCAACTTGCGCATTAAACAAGATTCTCAGGGCGCTCTCATGGTGTACCCCTACTTTGGGGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 72 bp CCTCGGGGCATATACACCGGAAACCATTCACATCATTaGTGCACGTCGCACCCTTGCGACAGGGGTTGGAGG +
Preference number: 6 (lower is better)
Translates to: PRGIYTGNHSHH*CTSHPCDRGWR
Trigger: CCTCCAACCCCTGTCGCAAGGGTGCGACGTGCATCAATGATGTGAATGGTTTCCGGTGTATATGCCCCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 72 bp CCAGGGGGCACTGGCAGTGATGGGTGTTGCCAGCATTaGTACAGATGCCCGAGTGCTGGCACAAGTGTTCAA +
Preference number: 6 (lower is better)
Translates to: PGGTGSDGCCQH*YRCPSAGTSVQ
Trigger: TTGAACACTTGTGCCAGCACTCGGGCATCTGTATCAATGCTGGCAACACCCATCACTGCCAGTGCCCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp AGGCGTAACTGTGTTGGGAAGGGGGTGTGGGGTACTTaGCCACAGAGGCTGGGAAAGGATGATAGGTTGGCA +
Preference number: 6 (lower is better)
Translates to: RRNCVGKGVWGT*PQRLGKDDRLA
Trigger: TGCCAACCTATCATCCTTTCCCAGCCTCTGTGGGCAAGTACCCCACACCCCCTTCCCAACACAGTTACGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp AGGCAGGGAGTACTGGAGCAGTCATCAATGTCGATCTaGCACACTGGTCCTGTGAAGCCAGGGGGACACAGA +
Preference number: 6 (lower is better)
Translates to: RQGVLEQSSMSI*HTGPVKPGGHR
Trigger: TCTGTGTCCCCCTGGCTTCACAGGACCAGTGTGCCAGATCGACATTGATGACTGCTCCAGTACTCCCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp GAGCTCTCAGTGCACTCGTCAATGTTGTTTTCACAGTaGACTCCGTGGAAGCCCGCAGGGCATGTGCAGGTG +
Preference number: 6 (lower is better)
Translates to: ELSVHSSMLFSQ*TPWKPAGHVQV
Trigger: CACCTGCACATGCCCTGCGGGCTTCCACGGAGTCCACTGTGAAAACAACATTGACGAGTGCACTGAGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp GCTCTTGGTGTTGGGCCGCCTAGCCTTCTTACCCATTaGGGTGTGCTTCAGACTGAGGAAAGACCTGTTGGG +
Preference number: 6 (lower is better)
Translates to: ALGVGPPSLLTH*GVLQTEERPVG
Trigger: CCCAACAGGTCTTTCCTCAGTCTGAAGCACACCCCAATGGGTAAGAAGGCTAGGCGGCCCAACACCAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp TCGACGGGGGATAGAGTCACTGAGCTCTCGGACAGCTaGACCTTCTCGTTCAGACACTTCTTCCTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: STGDRVTELSDS*TFSFRHFFLLL
Trigger: CAGCAGGAGGAAGAAGTGTCTGAACGAGAAGGTCCAGCTGTCCGAGAGCTCAGTGACTCTATCCCCCGTCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp GTACTTGCCCACAGAGGCTGGGAAAGGATGATAGGTTaGCACAATGGTCTGAGCTACCTGCCCCTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: VLAHRGWERMIG*HNGLSYLPLLL
Trigger: CAGCAGGAGGGGCAGGTAGCTCAGACCATTGTGCCAACCTATCATCCTTTCCCAGCCTCTGTGGGCAAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp TTGGGAAGGGGGTGTGGGGTACTTGCCCACAGAGGCTaGGAAAGGATGATAGGTTGGCACAATGGTCTGAGC +
Preference number: 6 (lower is better)
Translates to: LGRGCGVLAHRG*ERMIGWHNGLS
Trigger: GCTCAGACCATTGTGCCAACCTATCATCCTTTCCCAGCCTCTGTGGGCAAGTACCCCACACCCCCTTCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 72 bp CCCTCGGGGCATATACACCGGAAACCATTCACATCATaGATGCACGTCGCACCCTTGCGACAGGGGTTGGAG +
Preference number: 6 (lower is better)
Translates to: PSGHIHRKPFTS*MHVAPLRQGLE
Trigger: CTCCAACCCCTGTCGCAAGGGTGCGACGTGCATCAATGATGTGAATGGTTTCCGGTGTATATGCCCCGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 72 bp GGCTCGCTCAGACACTCATTCATGTCTGTCTGGCACTaGTCCCCTATGAAGCCAGGATGGCACTGGCAGGAG +
Preference number: 6 (lower is better)
Translates to: GSLRHSFMSVWH*SPMKPGWHWQE
Trigger: CTCCTGCCAGTGCCATCCTGGCTTCATAGGGGACAAGTGCCAGACAGACATGAATGAGTGTCTGAGCGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 72 bp AGTGTGGATACACTGCTCCCCTCTCCTGCACTTCACTaGTCCACAGCTGCTCTGGCATCTCGCCCCAGAGAA +
Preference number: 6 (lower is better)
Translates to: SVDTLLPSPALH*STAALASRPRE
Trigger: TTCTCTGGGGCGAGATGCCAGAGCAGCTGTGGACAAGTGAAGTGCAGGAGAGGGGAGCAGTGTATCCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 90 bp GCCTTCTTACCCATTGGGGTGTGCTTCAGACTGAGGAAAGACCTGTaGGGCCCACAGAGGACAGGTGAGAGCGCAGAAGTCAAGACCGTT +
Preference number: 6 (lower is better)
Translates to: AFLPIGVCFRLRKDL*GPQRTGESAEVKTV
Trigger: AACGGTCTTGACTTCTGCGCTCTCACCTGTCCTCTGTGGGCCCAACAGGTCTTTCCTCAGTCTGAAGCACACCCCAATGGGTAAGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 72 bp ATCATGGGAGAGGATGTGGCATCGGAGACATACGTGTaGGGAGACTCGAGCGAATCGACGGGGGATAGAGTC +
Preference number: 6 (lower is better)
Translates to: IMGEDVASETYV*GDSSESTGDRV
Trigger: GACTCTATCCCCCGTCGATTCGCTCGAGTCTCCTCACACGTATGTCTCCGATGCCACATCCTCTCCCATGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp GTTGGCAGTTGCACTGGTAACCATTCACCAGGTCAATaGAGCGCCCATCGTTCAAGCAAGGGCTGCTGTAGC +
Preference number: 6 (lower is better)
Translates to: VGSCTGNHSPGQ*SAHRSSKGCCS
Trigger: GCTACAGCAGCCCTTGCTTGAACGATGGGCGCTGCATTGACCTGGTGAATGGTTACCAGTGCAACTGCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp TTCGGTTGGTGCAGGTGCCTCCATTCTGACAAGCGTTaGGCTGCAACAGACACTCGTCCACATCTTCTGTGC +
Preference number: 6 (lower is better)
Translates to: FGWCRCLHSDKR*AATDTRPHLLC
Trigger: GCACAGAAGATGTGGACGAGTGTCTGTTGCAGCCCAACGCTTGTCAGAATGGAGGCACCTGCACCAACCGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp ATCGATGTTCTCTTCACACAGCAGGCCCCGGGTGCCTaGGGGACACGAACACTTGAAATGGTTCACAAGGTC +
Preference number: 6 (lower is better)
Translates to: IDVLFTQQAPGA*GTRTLEMVHKV
Trigger: GACCTTGTGAACCATTTCAAGTGTTCGTGTCCCCCAGGCACCCGGGGCCTGCTGTGTGAAGAGAACATCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 72 bp ACTCCTTTCTGCAAGGCTGCCGCCTTACAGGACACGTaGAGCACATCACAGTATGCACCATCCCATCCAGGC +
Preference number: 6 (lower is better)
Translates to: TPFCKAAALQDT*STSQYAPSHPG
Trigger: GCCTGGATGGGATGGTGCATACTGTGATGTGCTCAACGTGTCCTGTAAGGCGGCAGCCTTGCAGAAAGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 90 bp TCAACACACGTTCCAGCATTCAGGCACGGGTTAGAGCTGCACTCATaGATATCATGGAGGCAGAAGGGACCAGTGAAACCCACGGGGCAC +
Preference number: 6 (lower is better)
Translates to: STHVPAFRHGLELHS*ISWRQKGPVKPTGH
Trigger: GTGCCCCGTGGGTTTCACTGGTCCCTTCTGCCTCCATGATATCAATGAGTGCAGCTCTAACCCGTGCCTGAATGCTGGAACGTGTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 90 bp TCAAACAGGCACTCTGCGGTGTTGCACTGCTCATCACACTGGTTGTaGATGTATTCCCAGCAGCGAAGAGTGGAGGTGCAGTTGGCCCAG +
Preference number: 6 (lower is better)
Translates to: SNRHSAVLHCSSHWL*MYSQQRRVEVQLAQ
Trigger: CTGGGCCAACTGCACCTCCACTCTTCGCTGCTGGGAATACATCAACAACCAGTGTGATGAGCAGTGCAACACCGCAGAGTGCCTGTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp CACAGACACTGGAAGCGGTTGACTTTGTCCACACACTaGCCGTTGTTCACACACGGGTTGCTCTGGCATTCA +
Preference number: 6 (lower is better)
Translates to: HRHWKRLTLSTH*PLFTHGLLWHS
Trigger: TGAATGCCAGAGCAACCCGTGTGTGAACAACGGGCAGTGTGTGGACAAAGTCAACCGCTTCCAGTGTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp GAGTGCTGGCACAAGTGTTCAACAGGTACTCCTTTCTaGAAGGCTGCCGCCTTACAGGACACGTTGAGCACA +
Preference number: 6 (lower is better)
Translates to: ECWHKCSTGTPF*KAAALQDTLST
Trigger: TGTGCTCAACGTGTCCTGTAAGGCGGCAGCCTTGCAGAAAGGAGTACCTGTTGAACACTTGTGCCAGCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp CAGTCAGATGCAGAGTGTGGTGAAGAGCTTGACCATTaGTCAGGAGACTCTGGGGATGGTGTCAGGTATGGG +
Preference number: 6 (lower is better)
Translates to: QSDAECGEELDH*SGDSGDGVRYG
Trigger: CCCATACCTGACACCATCCCCAGAGTCTCCTGACCAATGGTCAAGCTCTTCACCACACTCTGCATCTGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 72 bp CACTCTGCGGTGTTGCACTGCTCATCACACTGGTTGTaGATGTATTCCCAGCAGCGAAGAGTGGAGGTGCAG +
Preference number: 6 (lower is better)
Translates to: HSAVLHCSSHWL*MYSQQRRVEVQ
Trigger: CTGCACCTCCACTCTTCGCTGCTGGGAATACATCAACAACCAGTGTGATGAGCAGTGCAACACCGCAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 72 bp AGGCACTCTGCGGTGTTGCACTGCTCATCACACTGGTaGTTGATGTATTCCCAGCAGCGAAGAGTGGAGGTG +
Preference number: 6 (lower is better)
Translates to: RHSAVLHCSSHW*LMYSQQRRVEV
Trigger: CACCTCCACTCTTCGCTGCTGGGAATACATCAACAACCAGTGTGATGAGCAGTGCAACACCGCAGAGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 90 bp TTGTCAAACAGGCACTCTGCGGTGTTGCACTGCTCATCACACTGGTaGTTGATGTATTCCCAGCAGCGAAGAGTGGAGGTGCAGTTGGCC +
Preference number: 6 (lower is better)
Translates to: LSNRHSAVLHCSSHW*LMYSQQRRVEVQLA
Trigger: GGCCAACTGCACCTCCACTCTTCGCTGCTGGGAATACATCAACAACCAGTGTGATGAGCAGTGCAACACCGCAGAGTGCCTGTTTGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 90 bp CTGTTGGCCCCATTCTTCAACAGCAGAAGAGTCGCCTCCACATTATaGACAGCAGCTGCCCAGTGGAGGGCAGATTTTCCATGGTCATCC +
Preference number: 6 (lower is better)
Translates to: LLAPFFNSRRVASTL*TAAAQWRADFPWSS
Trigger: GGATGACCATGGAAAATCTGCCCTCCACTGGGCAGCTGCTGTCAATAATGTGGAGGCGACTCTTCTGCTGTTGAAGAATGGGGCCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 90 bp TGGTGGTCACATCTGACCAGTCAGATGCAGAGTGTGGTGAAGAGCTaGACCATTGGTCAGGAGACTCTGGGGATGGTGTCAGGTATGGGT +
Preference number: 6 (lower is better)
Translates to: WWSHLTSQMQSVVKS*TIGQETLGMVSGMG
Trigger: ACCCATACCTGACACCATCCCCAGAGTCTCCTGACCAATGGTCAAGCTCTTCACCACACTCTGCATCTGACTGGTCAGATGTGACCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 72 bp AGACCTGCGTGTCATCTTCTGCTTCTTCATGGCAGCTaGCTTCTCCCCAAAGTAGGGGTACACCATGAGAGC +
Preference number: 6 (lower is better)
Translates to: RPACHLLLLHGS*LLPKVGVHHES
Trigger: GCTCTCATGGTGTACCCCTACTTTGGGGAGAAGTCAGCTGCCATGAAGAAGCAGAAGATGACACGCAGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp CCAGGTCAATGCAGCGCCCATCGTTCAAGCAAGGGCTaGTGTAGCATTCATCAATCTGGTCACTACAGATGG +
Preference number: 6 (lower is better)
Translates to: PGQCSAHRSSKG*CSIHQSGHYRW
Trigger: CCATCTGTAGTGACCAGATTGATGAATGCTACAGCAGCCCTTGCTTGAACGATGGGCGCTGCATTGACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp ATTTTTGTCCACCTCACAGTTGACACCAACCCAGCCTaGATCGCAGAGGCACTTATAGCCACTGAGACCTCC +
Preference number: 6 (lower is better)
Translates to: IFVHLTVDTNPA*IAEALIATETS
Trigger: GGAGGTCTCAGTGGCTATAAGTGCCTCTGCGATGCAGGCTGGGTTGGTGTCAACTGTGAGGTGGACAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp TCTGACAGTTTTTCCCGGTGTAGCCCAAGGGACAGATaGATCGGTAGGTACCCAGACCATCAACACACGTTC +
Preference number: 6 (lower is better)
Translates to: SDSFSRCSPRDR*IGRYPDHQHTF
Trigger: GAACGTGTGTTGATGGTCTGGGTACCTACCGATGCATCTGTCCCTTGGGCTACACCGGGAAAAACTGTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp TCGATCTCCAGAAATATCTTAGAGCCTATCACCTCCTaGTCCTGCTCCTGCTCCTCAGGAAGAGACCTGCGT +
Preference number: 6 (lower is better)
Translates to: SISRNILEPITS*SCSCSSGRDLR
Trigger: ACGCAGGTCTCTTCCTGAGGAGCAGGAGCAGGAGCAGGAGGTGATAGGCTCTAAGATATTTCTGGAGATCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp AACAGGCACTCTGCGGTGTTGCACTGCTCATCACACTaGTTGTTGATGTATTCCCAGCAGCGAAGAGTGGAG +
Preference number: 6 (lower is better)
Translates to: NRHSAVLHCSSH*LLMYSQQRRVE
Trigger: CTCCACTCTTCGCTGCTGGGAATACATCAACAACCAGTGTGATGAGCAGTGCAACACCGCAGAGTGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp AGAGTCGCCTCCACATTATTGACAGCAGCTGCCCAGTaGAGGGCAGATTTTCCATGGTCATCCACTGCATTG +
Preference number: 6 (lower is better)
Translates to: RVASTLLTAAAQ*RADFPWSSTAL
Trigger: CAATGCAGTGGATGACCATGGAAAATCTGCCCTCCACTGGGCAGCTGCTGTCAATAATGTGGAGGCGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp GCAGGAGCCAGGACCATGCCAAACATTTCACTGTACTaGGTCTCGTTCATCTCCACACGGTTCATCCAGTCT +
Preference number: 6 (lower is better)
Translates to: AGARTMPNISLY*VSFISTRFIQS
Trigger: AGACTGGATGAACCGTGTGGAGATGAACGAGACCCAGTACAGTGAAATGTTTGGCATGGTCCTGGCTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 72 bp CACTGGAAGCGGTTGACTTTGTCCACACACTGCCCGTaGTTCACACACGGGTTGCTCTGGCATTCATTTACC +
Preference number: 6 (lower is better)
Translates to: HWKRLTLSTHCP*FTHGLLWHSFT
Trigger: GGTAAATGAATGCCAGAGCAACCCGTGTGTGAACAACGGGCAGTGTGTGGACAAAGTCAACCGCTTCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 72 bp CTCACACGGGTTTGGGGAACAGGGAGCCAACACTGTTaGACAGTTCTTGCCTGTGTAAGGCAACATGCAGTG +
Preference number: 6 (lower is better)
Translates to: LTRVWGTGSQHC*TVLACVRQHAV
Trigger: CACTGCATGTTGCCTTACACAGGCAAGAACTGTCAAACAGTGTTGGCTCCCTGTTCCCCAAACCCGTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 72 bp GTTCCAGCATTCAGGCACGGGTTAGAGCTGCACTCATaGATATCATGGAGGCAGAAGGGACCAGTGAAACCC +
Preference number: 6 (lower is better)
Translates to: VPAFRHGLELHS*ISWRQKGPVKP
Trigger: GGGTTTCACTGGTCCCTTCTGCCTCCATGATATCAATGAGTGCAGCTCTAACCCGTGCCTGAATGCTGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 72 bp GGAACACACTCACATCTGTATCCTCCGATGAAGTCATaGCAGGTGGCACCGTGCTGGCATGGATTGGATGCA +
Preference number: 6 (lower is better)
Translates to: GTHSHLYPPMKS*QVAPCWHGLDA
Trigger: TGCATCCAATCCATGCCAGCACGGTGCCACCTGCAATGACTTCATCGGAGGATACAGATGTGAGTGTGTTCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 72 bp AAAGTAGGGGTACACCATGAGAGCGCCCTGAGAATCTaGTTTAATGCGCAAGTTGGTGTGGAGCAGGGTGCC +
Preference number: 6 (lower is better)
Translates to: KVGVHHESALRI*FNAQVGVEQGA
Trigger: GGCACCCTGCTCCACACCAACTTGCGCATTAAACAAGATTCTCAGGGCGCTCTCATGGTGTACCCCTACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 72 bp CATCTGACCAGTCAGATGCAGAGTGTGGTGAAGAGCTaGACCATTGGTCAGGAGACTCTGGGGATGGTGTCA +
Preference number: 6 (lower is better)
Translates to: HLTSQMQSVVKS*TIGQETLGMVS
Trigger: TGACACCATCCCCAGAGTCTCCTGACCAATGGTCAAGCTCTTCACCACACTCTGCATCTGACTGGTCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 90 bp AAGCGGTTGACTTTGTCCACACACTGCCCGTTGTTCACACACGGGTaGCTCTGGCATTCATTTACCTCCAGCTCACAATGCACACCTTTG +
Preference number: 6 (lower is better)
Translates to: KRLTLSTHCPLFTHG*LWHSFTSSSQCTPL
Trigger: CAAAGGTGTGCATTGTGAGCTGGAGGTAAATGAATGCCAGAGCAACCCGTGTGTGAACAACGGGCAGTGTGTGGACAAAGTCAACCGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 90 bp TTGCACGTTCCTCCATTCTGGCATGGGTTAGAAAGACACTCATTTTaGTCCACCTCACAGTTGACACCAACCCAGCCTGCATCGCAGAGG +
Preference number: 6 (lower is better)
Translates to: LHVPPFWHGLERHSF*STSQLTPTQPASQR
Trigger: CCTCTGCGATGCAGGCTGGGTTGGTGTCAACTGTGAGGTGGACAAAAATGAGTGTCTTTCTAACCCATGCCAGAATGGAGGAACGTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 90 bp TTACCTTGCCAGCCAGGAGCACACAAGCAGCTGAAGCTCTCAAAATaGGGTGCCTCTTTACAAACAGCAGCATTCTCACACGGGTTTGGG +
Preference number: 6 (lower is better)
Translates to: LPCQPGAHKQLKLSK*GASLQTAAFSHGFG
Trigger: CCCAAACCCGTGTGAGAATGCTGCTGTTTGTAAAGAGGCACCCAATTTTGAGAGCTTCAGCTGCTTGTGTGCTCCTGGCTGGCAAGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 72 bp CAGTCCACTGAGGGGGACAGCGGCAATTGTAGGTATTaGCACCATCCACACAAACTCCTCCATTCTGACACT +
Preference number: 6 (lower is better)
Translates to: QSTEGDSGNCRY*HHPHKLLHSDT
Trigger: AGTGTCAGAATGGAGGAGTTTGTGTGGATGGTGTCAATACCTACAATTGCCGCTGTCCCCCTCAGTGGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 72 bp GATATCCTGGAACACACTCACATCTGTATCCTCCGATaGAGTCATTGCAGGTGGCACCGTGCTGGCATGGAT +
Preference number: 6 (lower is better)
Translates to: DILEHTHICILR*SHCRWHRAGMD
Trigger: ATCCATGCCAGCACGGTGCCACCTGCAATGACTTCATCGGAGGATACAGATGTGAGTGTGTTCCAGGATATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 72 bp GACACACATCTAGGAAGGTTTCACAGTGCCGGCCCGTaGAGGCGCTGCGGCAGATACAGTTGTAGTTATTTT +
Preference number: 6 (lower is better)
Translates to: DTHLGRFHSAGP*RRCGRYSCSYF
Trigger: AAAATAACTACAACTGTATCTGCCGCAGCGCCTTCACGGGCCGGCACTGTGAAACCTTCCTAGATGTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 72 bp GAGAAGCCAGGAGAGCAGCTGCCGCATCTGTGTTTTTaGAGCACTGGTCTGAATCTTGAACACACTGTCGGT +
Preference number: 6 (lower is better)
Translates to: EKPGEQLPHLCF*STGLNLEHTVG
Trigger: ACCGACAGTGTGTTCAAGATTCAGACCAGTGCTTCAAAAACACAGATGCGGCAGCTGCTCTCCTGGCTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 72 bp ATGTTCACTTGTCCCAGAACCAATCAGGTTAGCCTCTaGCACTTGCACGGAGAGATTTTTCAGCCCCACGGC +
Preference number: 6 (lower is better)
Translates to: MFTCPRTNQVSL*HLHGEIFQPHG
Trigger: GCCGTGGGGCTGAAAAATCTCTCCGTGCAAGTGTCAGAGGCTAACCTGATTGGTTCTGGGACAAGTGAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp GAACACAAGTTCCTTTGTTTTTACACGGAGACCGGCTaGAGAGGTTCACCAGGGTCTGACAGTTTTTCCCGG +
Preference number: 6 (lower is better)
Translates to: EHKFLCFYTETG*RGSPGSDSFSR
Trigger: CCGGGAAAAACTGTCAGACCCTGGTGAACCTCTGCAGCCGGTCTCCGTGTAAAAACAAAGGAACTTGTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp TGGGTGTTGCCAGCATTGATACAGATGCCCGAGTGCTaGCACAAGTGTTCAACAGGTACTCCTTTCTGCAAG +
Preference number: 6 (lower is better)
Translates to: WVLPALIQMPEC*HKCSTGTPFCK
Trigger: CTTGCAGAAAGGAGTACCTGTTGAACACTTGTGCCAGCACTCGGGCATCTGTATCAATGCTGGCAACACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 72 bp ACTTTGTCCACACACTGCCCGTTGTTCACACACGGGTaGCTCTGGCATTCATTTACCTCCAGCTCACAATGC +
Preference number: 6 (lower is better)
Translates to: TLSTHCPLFTHG*LWHSFTSSSQC
Trigger: GCATTGTGAGCTGGAGGTAAATGAATGCCAGAGCAACCCGTGTGTGAACAACGGGCAGTGTGTGGACAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 72 bp CCATTCTTCAACAGCAGAAGAGTCGCCTCCACATTATaGACAGCAGCTGCCCAGTGGAGGGCAGATTTTCCA +
Preference number: 6 (lower is better)
Translates to: PFFNSRRVASTL*TAAAQWRADFP
Trigger: TGGAAAATCTGCCCTCCACTGGGCAGCTGCTGTCAATAATGTGGAGGCGACTCTTCTGCTGTTGAAGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 72 bp AGAGAAGCTGGGCGTTTCTTGGACTCTCCAGTTCACTaGAAACAGACACTAGAGGGTAGGATAGGGTCCCTT +
Preference number: 6 (lower is better)
Translates to: REAGRFLDSPVH*KQTLEGRIGSL
Trigger: AAGGGACCCTATCCTACCCTCTAGTGTCTGTTTTCAGTGAACTGGAGAGTCCAAGAAACGCCCAGCTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 72 bp CATTCTTCAACAGCAGAAGAGTCGCCTCCACATTATTaGCAGCAGCTGCCCAGTGGAGGGCAGATTTTCCAT +
Preference number: 6 (lower is better)
Translates to: HSSTAEESPPHY*QQLPSGGQIFH
Trigger: ATGGAAAATCTGCCCTCCACTGGGCAGCTGCTGTCAATAATGTGGAGGCGACTCTTCTGCTGTTGAAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp TGGAAGGCGCCATCTGTATTCACACACTTTCCTGCATaGTCACAAGGGTTACTGTTGGCCATAGCACACTCA +
Preference number: 6 (lower is better)
Translates to: WKAPSVFTHFPA*SQGLLLAIAHS
Trigger: TGAGTGTGCTATGGCCAACAGTAACCCTTGTGAGCATGCAGGAAAGTGTGTGAATACAGATGGCGCCTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp ACAGTGGAAGGCGCCATCTGTATTCACACACTTTCCTaGATGCTCACAAGGGTTACTGTTGGCCATAGCACA +
Preference number: 6 (lower is better)
Translates to: TVEGAICIHTLS*MLTRVTVGHST
Trigger: TGTGCTATGGCCAACAGTAACCCTTGTGAGCATGCAGGAAAGTGTGTGAATACAGATGGCGCCTTCCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 72 bp CCTCCATTCTGGCATGGGTTAGAAAGACACTCATTTTaGTCCACCTCACAGTTGACACCAACCCAGCCTGCA +
Preference number: 6 (lower is better)
Translates to: PPFWHGLERHSF*STSQLTPTQPA
Trigger: TGCAGGCTGGGTTGGTGTCAACTGTGAGGTGGACAAAAATGAGTGTCTTTCTAACCCATGCCAGAATGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 72 bp GTGCCTCTTTACAAACAGCAGCATTCTCACACGGGTTaGGGGAACAGGGAGCCAACACTGTTTGACAGTTCT +
Preference number: 6 (lower is better)
Translates to: VPLYKQQHSHTG*GNREPTLFDSS
Trigger: AGAACTGTCAAACAGTGTTGGCTCCCTGTTCCCCAAACCCGTGTGAGAATGCTGCTGTTTGTAAAGAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 72 bp GATACACTCATCAACGTCAACTGTACATCGTTTACCTaGCCAGCCAGGAGCACACAAGCAGCTGAAGCTCTC +
Preference number: 6 (lower is better)
Translates to: DTLINVNCTSFT*PARSTQAAEAL
Trigger: GAGAGCTTCAGCTGCTTGTGTGCTCCTGGCTGGCAAGGTAAACGATGTACAGTTGACGTTGATGAGTGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 72 bp CAGTGGAGGGCAGATTTTCCATGGTCATCCACTGCATaGACATCTGCTTGGCAATTGATCAACTCTGCCACC +
Preference number: 6 (lower is better)
Translates to: QWRADFPWSSTA*TSAWQLINSAT
Trigger: GGTGGCAGAGTTGATCAATTGCCAAGCAGATGTCAATGCAGTGGATGACCATGGAAAATCTGCCCTCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 72 bp CCTCGCTGTTGCATCCCTGATCACAGTGGTTGTCTTTaGAGTGGTCTGCACAGTATTTGTCATACTTGCACG +
Preference number: 6 (lower is better)
Translates to: PRCCIPDHSGCL*SGLHSICHTCT
Trigger: CGTGCAAGTATGACAAATACTGTGCAGACCACTTCAAAGACAACCACTGTGATCAGGGATGCAACAGCGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp ATACACTCATCAACGTCAACTGTACATCGTTTACCTTaGCAGCCAGGAGCACACAAGCAGCTGAAGCTCTCA +
Preference number: 6 (lower is better)
Translates to: IHSSTSTVHRLP*QPGAHKQLKLS
Trigger: TGAGAGCTTCAGCTGCTTGTGTGCTCCTGGCTGGCAAGGTAAACGATGTACAGTTGACGTTGATGAGTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp TCAAAGTTGTCAAACAGGCACTCTGCGGTGTTGCACTaGTCATCACACTGGTTGTTGATGTATTCCCAGCAG +
Preference number: 6 (lower is better)
Translates to: SKLSNRHSAVLH*SSHWLLMYSQQ
Trigger: CTGCTGGGAATACATCAACAACCAGTGTGATGAGCAGTGCAACACCGCAGAGTGCCTGTTTGACAACTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 90 bp TATTTGTCATACTTGCACGTCTTGCTATTCCTCTGGCACTCAAAGTaGTCAAACAGGCACTCTGCGGTGTTGCACTGCTCATCACACTGG +
Preference number: 6 (lower is better)
Translates to: YLSYLHVLLFLWHSK*SNRHSAVLHCSSHW
Trigger: CCAGTGTGATGAGCAGTGCAACACCGCAGAGTGCCTGTTTGACAACTTTGAGTGCCAGAGGAATAGCAAGACGTGCAAGTATGACAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CCA 72 bp GTCCACTTCATACTCACAGTTGACACCCTGATATCCTaGAACACACTCACATCTGTATCCTCCGATGAAGTC +
Preference number: 6 (lower is better)
Translates to: VHFILTVDTLIS*NTLTSVSSDEV
Trigger: GACTTCATCGGAGGATACAGATGTGAGTGTGTTCCAGGATATCAGGGTGTCAACTGTGAGTATGAAGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS CAA 90 bp GCAAGAAACAAAGGTGTCTCTTCCTTATTGTCCTGCATATCTCTGTaGGCCCCATTCTTCAACAGCAGAAGAGTCGCCTCCACATTATTG +
Preference number: 6 (lower is better)
Translates to: ARNKGVSSLLSCISL*APFFNSRRVASTLL
Trigger: CAATAATGTGGAGGCGACTCTTCTGCTGTTGAAGAATGGGGCCAACAGAGATATGCAGGACAATAAGGAAGAGACACCTTTGTTTCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS TCA 72 bp GCCGCATCTGTGTTTTTGAAGCACTGGTCTGAATCTTaGACACACTGTCGGTTGTCGATCTCCAGAAATATC +
Preference number: 6 (lower is better)
Translates to: AASVFLKHWSES*THCRLSISRNI
Trigger: GATATTTCTGGAGATCGACAACCGACAGTGTGTTCAAGATTCAGACCAGTGCTTCAAAAACACAGATGCGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8
CDS GCA 72 bp GCATCCCTGATCACAGTGGTTGTCTTTGAAGTGGTCTaGACAGTATTTGTCATACTTGCACGTCTTGCTATT +
Preference number: 6 (lower is better)
Translates to: ASLITVVVFEVV*TVFVILARLAI
Trigger: AATAGCAAGACGTGCAAGTATGACAAATACTGTGCAGACCACTTCAAAGACAACCACTGTGATCAGGGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079812.8