RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NOTCH1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026923

Ensembl transcript IDs: ENSMUST00000028288.5, ENSMUST00000132820.2

Found 595 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCCCAGCACACAGTGGCTGGAAAGGGACTTGGTGGGCAGCAGATaGGCCATCCTGGGTTGTGCTCTTAGGAGCTACTGGTTCGGCAGC +
Preference number: 1 (lower is better)
Translates to: APSTQWLERDLVGSR*AILGCALRSYWFGS
Trigger: GCTGCCGAACCAGTAGCTCCTAAGAGCACAACCCAGGATGGCCCATCTGCTGCCCACCAAGTCCCTTTCCAGCCACTGTGTGCTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR CCA 90 bp AATGCAGGCTACTCTGGCGAGTCCACAATGCACATTGGAGCCCTTTaGCAGTCAGGTGTTAGGAGCCCAGGCCCAGGCCGGGACAGTCCG +
Preference number: 1 (lower is better)
Translates to: NAGYSGESTMHIGAL*QSGVRSPGPGRDSP
Trigger: CGGACTGTCCCGGCCTGGGCCTGGGCTCCTAACACCTGACTGCCAAAGGGCTCCAATGTGCATTGTGGACTCGCCAGAGTAGCCTGCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR CCA 90 bp GTTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTaGATTTGGATGATGCTGTTTGGAGGGATGCACAGAACAGTCCAG +
Preference number: 1 (lower is better)
Translates to: VRSPGPGRDSPSVLS*IWMMLFGGMHRTVQ
Trigger: CTGGACTGTTCTGTGCATCCCTCCAAACAGCATCATCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR CCA 90 bp ATACTGCAAGAATCTGCTGTGAGCACAGCCCTGAACCAGGAGGGGTaGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGCA +
Preference number: 1 (lower is better)
Translates to: ILQESAVSTALNQEG*PRSRLHPHSSTLKA
Trigger: TGCCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGTTCAGGGCTGTGCTCACAGCAGATTCTTGCAGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR TCA 90 bp GAGCTACTGGTTCGGCAGCTACAGGTCACAAGGTCTGGGTCACACTaGGCTAAGCCACAGTCTGACAGTCCTCATCAGCTTGACACACGA +
Preference number: 1 (lower is better)
Translates to: ELLVRQLQVTRSGSH*AKPQSDSPHQLDTR
Trigger: TCGTGTGTCAAGCTGATGAGGACTGTCAGACTGTGGCTTAGCTCAGTGTGACCCAGACCTTGTGACCTGTAGCTGCCGAACCAGTAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR GCA 90 bp AGATACTTATTCTGCCACAGGCGTATACTTGATACTGCAAGAATCTaGTGTGAGCACAGCCCTGAACCAGGAGGGGTGGCCCAGAAGCAG +
Preference number: 1 (lower is better)
Translates to: RYLFCHRRILDTARI*CEHSPEPGGVAQKQ
Trigger: CTGCTTCTGGGCCACCCCTCCTGGTTCAGGGCTGTGCTCACAGCAGATTCTTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR CCA 90 bp GTAGACTCTGCACATGCTGAGGACACTTCTTCAAGTCCACACTGGTaGTTACAGAAAGTGTACAAACCACATCATCTGACTTGTTTCCTG +
Preference number: 1 (lower is better)
Translates to: VDSAHAEDTSSSPHW*LQKVYKPHHLTCFL
Trigger: CAGGAAACAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGACTTGAAGAAGTGTCCTCAGCATGTGCAGAGTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR-3UTR GCA 90 bp CTTTGGCAGTCAGGTGTTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCTGCTGTTTGGAGGGATaGACAGAACAGTCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: LWQSGVRSPGPGRDSPSVCCLEG*TEQSRQ
Trigger: CTGCCTGGACTGTTCTGTGCATCCCTCCAAACAGCA...GACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAACACCTGACTGCCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR-3UTR GCA 90 bp CCTGAACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCTGGCGAGTCCACAATaGACATTGGAGCCCTTTGGC +
Preference number: 2 (lower is better)
Translates to: PEPGGVAQKQAPPTFQHTLASPQ*TLEPFG
Trigger: GCCAAAGGGCTCCAATGTGCATTGTGGACTCGCCAG...AGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR-3UTR CCA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGAGCACCACACCCTGCATaGCTTACTGGCTCAAGTTGT +
Preference number: 2 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGAPHPA*LTGSSC
Trigger: ACAACTTGAGCCAGTAAGCCATGCAGGGTGTGGTGC...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR-3UTR CCA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGTTGGATGATGCTGTTTaGAGGGATGCACAGAACAGT +
Preference number: 2 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRLDDAV*RDAQNS
Trigger: ACTGTTCTGTGCATCCCTCCAAACAGCATCATCCAA...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR CAA 90 bp ACCCAGGCCAGTTTGGGGATCAGAGGCCACATAGCTTCTGTTTTCTaGGAGTCTCAATGCAGGCTACTCTGGCGAGTCCACAATGCACAT +
Preference number: 2 (lower is better)
Translates to: TQASLGIRGHIASVF*ESQCRLLWRVHNAH
Trigger: ATGTGCATTGTGGACTCGCCAGAGTAGCCTGCATTGAGACTCCAAGAAAACAGAAGCTATGTGGCCTCTGATCCCCAAACTGGCCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR-3UTR CCA 90 bp CAGTCCGTCTGTCCTCAGTTGGATTTGGATGATGCTGTTTGGAGGGATGCACAGCCCTGCATGGCTTACTaGCTCAAGTTGTCAGGAAGG +
Preference number: 2 (lower is better)
Translates to: QSVCPQLDLDDAVWRDAQPCMAY*LKLSGR
Trigger: CCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGG...CTGTGCATCCCTCCAAACAGCATCATCCAAATCCAACTGAGGACAGACGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR-3UTR TCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCATACAAAACTAATCCATaGACCCAAGGTTCAAGGTCT +
Preference number: 2 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGAYKTNP*TQGSRS
Trigger: AGACCTTGAACCTTGGGTTCATGGATTAGTTTTGTA...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR-3UTR TCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCAACAAACCACATCATCTaGCTTGTTTCCTGTTTTAGA +
Preference number: 2 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGATNHII*LVSCFR
Trigger: TCTAAAACAGGAAACAAGTCAGATGATGTGGTTTGT...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR-3UTR GCA 90 bp AGTAAGAATCAACATCTTAGGATGCGTCTGGTCATATCTATTAGGCATGGCACAAAGGCCAGAAAGAGCTaGCCTGAGGAGGTGGGCAAC +
Preference number: 2 (lower is better)
Translates to: SKNQHLRMRLVISIRHGTKARKS*PEEVGN
Trigger: GTTGCCCACCTCCTCAGGGCAGCTCTTTCTGGCCTT...TGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR-3UTR CCA 90 bp AGTAAGAATCAACATCTTAGGATGCGTCTGGTCATATCTATTAGGCATGGCACAGTCCACAATGCACATTaGAGCCCTTTGGCAGTCAGG +
Preference number: 2 (lower is better)
Translates to: SKNQHLRMRLVISIRHGTVHNAH*SPLAVR
Trigger: CCTGACTGCCAAAGGGCTCCAATGTGCATTGTGGAC...TGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR-3UTR TCA 90 bp AGTAAGAATCAACATCTTAGGATGCGTCTGGTCATATCTATTAGGCATGGCACATCAGTTGGATTTGGATaGTGCTGTTTGGAGGGATGC +
Preference number: 2 (lower is better)
Translates to: SKNQHLRMRLVISIRHGTSVGFG*CCLEGC
Trigger: GCATCCCTCCAAACAGCATCATCCAAATCCAACTGA...TGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR CAA 90 bp TTTAAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTaGATACTGCAAGAATCTGCTGTGAGCACAGCCCTGAACCAGGAG +
Preference number: 2 (lower is better)
Translates to: FKHVFTDTYSATGVY*ILQESAVSTALNQE
Trigger: CTCCTGGTTCAGGGCTGTGCTCACAGCAGATTCTTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR-3UTR CCA 90 bp TCCATCTTTAAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGGGGCAATTCTGGCCATaGCAGTTTCCAGCTTCCCTT +
Preference number: 2 (lower is better)
Translates to: SIFKHVFTDTYSATGVYLGQFWP*QFPASL
Trigger: AAGGGAAGCTGGAAACTGCCATGGCCAGAATTGCCC...CAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTTAAAGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR-3UTR CCA 90 bp AGTAAGAATCAACATCTTAGGATGCGTCTGGTCATATCTATTAGGCATGGCACATCAAGTCCACACTGGTaGTTACAGAAAGTGTACAAA +
Preference number: 2 (lower is better)
Translates to: SKNQHLRMRLVISIRHGTSSPHW*LQKVYK
Trigger: TTTGTACACTTTCTGTAACCACCAGTGTGGACTTGA...TGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR CAA 90 bp TCCACACTGGTGGTTACAGAAAGTGTACAAACCACATCATCTGACTaGTTTCCTGTTTTAGATACAAAACTAATCCATGAACCCAAGGTT +
Preference number: 2 (lower is better)
Translates to: STLVVTESVQTTSSD*FPVLDTKLIHEPKV
Trigger: AACCTTGGGTTCATGGATTAGTTTTGTATCTAAAACAGGAAACAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR CCA 72 bp GGTGGGCAACTGCCCCCGAAAGCCCCCAGCACACAGTaGCTGGAAAGGGACTTGGTGGGCAGCAGATGGGCC +
Preference number: 3 (lower is better)
Translates to: GGQLPPKAPSTQ*LERDLVGSRWA
Trigger: GGCCCATCTGCTGCCCACCAAGTCCCTTTCCAGCCACTGTGTGCTGGGGGCTTTCGGGGGCAGTTGCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR CCA 72 bp CGAAAGCCCCCAGCACACAGTGGCTGGAAAGGGACTTaGTGGGCAGCAGATGGGCCATCCTGGGTTGTGCTC +
Preference number: 3 (lower is better)
Translates to: RKPPAHSGWKGT*WAADGPSWVVL
Trigger: GAGCACAACCCAGGATGGCCCATCTGCTGCCCACCAAGTCCCTTTCCAGCCACTGTGTGCTGGGGGCTTTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR CCA 72 bp GAATCTGCTGTGAGCACAGCCCTGAACCAGGAGGGGTaGCCCAGAAGCAGGCTCCACCCACATTCCAGCACA +
Preference number: 3 (lower is better)
Translates to: ESAVSTALNQEG*PRSRLHPHSST
Trigger: TGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGTTCAGGGCTGTGCTCACAGCAGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR CCA 72 bp AAGCCCCCAGCACACAGTGGCTGGAAAGGGACTTGGTaGGCAGCAGATGGGCCATCCTGGGTTGTGCTCTTA +
Preference number: 3 (lower is better)
Translates to: KPPAHSGWKGTW*AADGPSWVVLL
Trigger: TAAGAGCACAACCCAGGATGGCCCATCTGCTGCCCACCAAGTCCCTTTCCAGCCACTGTGTGCTGGGGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR CCA 72 bp AAAGGCTCCTTTGGTCGCCCCAGCATCCTGAAGCACTaGAAAGGACTCCCAACAGGGCTTGGGAACGGAAGC +
Preference number: 3 (lower is better)
Translates to: KGSFGRPSILKH*KGLPTGLGNGS
Trigger: GCTTCCGTTCCCAAGCCCTGTTGGGAGTCCTTTCCAGTGCTTCAGGATGCTGGGGCGACCAAAGGAGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR CCA 72 bp CCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTaGATTTGGATGATGCTGTTTGGAGGGATGCACAGA +
Preference number: 3 (lower is better)
Translates to: PGPGRDSPSVLS*IWMMLFGGMHR
Trigger: TCTGTGCATCCCTCCAAACAGCATCATCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR CCA 72 bp ACACAGTGGCTGGAAAGGGACTTGGTGGGCAGCAGATaGGCCATCCTGGGTTGTGCTCTTAGGAGCTACTGG +
Preference number: 3 (lower is better)
Translates to: TQWLERDLVGSR*AILGCALRSYW
Trigger: CCAGTAGCTCCTAAGAGCACAACCCAGGATGGCCCATCTGCTGCCCACCAAGTCCCTTTCCAGCCACTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR CCA 72 bp AGATGGGCCATCCTGGGTTGTGCTCTTAGGAGCTACTaGTTCGGCAGCTACAGGTCACAAGGTCTGGGTCAC +
Preference number: 3 (lower is better)
Translates to: RWAILGCALRSY*FGSYRSQGLGH
Trigger: GTGACCCAGACCTTGTGACCTGTAGCTGCCGAACCAGTAGCTCCTAAGAGCACAACCCAGGATGGCCCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR GCA 72 bp TTCTGCCACAGGCGTATACTTGATACTGCAAGAATCTaGTGTGAGCACAGCCCTGAACCAGGAGGGGTGGCC +
Preference number: 3 (lower is better)
Translates to: FCHRRILDTARI*CEHSPEPGGVA
Trigger: GGCCACCCCTCCTGGTTCAGGGCTGTGCTCACAGCAGATTCTTGCAGTATCAAGTATACGCCTGTGGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR CCA 72 bp CCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTaGATGATGCTGTTTGGAGGGATGCACAGAACAGTC +
Preference number: 3 (lower is better)
Translates to: PGRDSPSVLSWI*MMLFGGMHRTV
Trigger: GACTGTTCTGTGCATCCCTCCAAACAGCATCATCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR TCA 72 bp GTTCGGCAGCTACAGGTCACAAGGTCTGGGTCACACTaGGCTAAGCCACAGTCTGACAGTCCTCATCAGCTT +
Preference number: 3 (lower is better)
Translates to: VRQLQVTRSGSH*AKPQSDSPHQL
Trigger: AAGCTGATGAGGACTGTCAGACTGTGGCTTAGCTCAGTGTGACCCAGACCTTGTGACCTGTAGCTGCCGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR GCA 72 bp GGAGTCTCAATGCAGGCTACTCTGGCGAGTCCACAATaGACATTGGAGCCCTTTGGCAGTCAGGTGTTAGGA +
Preference number: 3 (lower is better)
Translates to: GVSMQATLASPQ*TLEPFGSQVLG
Trigger: TCCTAACACCTGACTGCCAAAGGGCTCCAATGTGCATTGTGGACTCGCCAGAGTAGCCTGCATTGAGACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR GCA 72 bp AGAGGCCACATAGCTTCTGTTTTCTTGGAGTCTCAATaGAGGCTACTCTGGCGAGTCCACAATGCACATTGG +
Preference number: 3 (lower is better)
Translates to: RGHIASVFLESQ*RLLWRVHNAHW
Trigger: CCAATGTGCATTGTGGACTCGCCAGAGTAGCCTGCATTGAGACTCCAAGAAAACAGAAGCTATGTGGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR CCA 72 bp TCCGTCTGTCCTCAGTTGGATTTGGATGATGCTGTTTaGAGGGATGCACAGAACAGTCCAGGCAGTGTTTTC +
Preference number: 3 (lower is better)
Translates to: SVCPQLDLDDAV*RDAQNSPGSVF
Trigger: GAAAACACTGCCTGGACTGTTCTGTGCATCCCTCCAAACAGCATCATCCAAATCCAACTGAGGACAGACGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR-3UTR CAA 90 bp AAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGATACTGCAAGACTCCCAACAGGGCTaGGGAACGGAAGCTGGGGTC +
Preference number: 3 (lower is better)
Translates to: KHVFTDTYSATGVYLILQDSQQG*GTEAGV
Trigger: GACCCCAGCTTCCGTTCCCAAGCCCTGTTGGGAGTC...TTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR CCA 72 bp GCACATGCTGAGGACACTTCTTCAAGTCCACACTGGTaGTTACAGAAAGTGTACAAACCACATCATCTGACT +
Preference number: 3 (lower is better)
Translates to: AHAEDTSSSPHW*LQKVYKPHHLT
Trigger: AGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGACTTGAAGAAGTGTCCTCAGCATGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR CCA 72 bp TCTGCACATGCTGAGGACACTTCTTCAAGTCCACACTaGTGGTTACAGAAAGTGTACAAACCACATCATCTG +
Preference number: 3 (lower is better)
Translates to: SAHAEDTSSSPH*WLQKVYKPHHL
Trigger: CAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGACTTGAAGAAGTGTCCTCAGCATGTGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR CCA 72 bp TACAACACAGTAAGAATCAACATCTTAGGATGCGTCTaGTCATATCTATTAGGCATGGCACAGACACTGCCC +
Preference number: 3 (lower is better)
Translates to: YNTVRINILGCV*SYLLGMAQTLP
Trigger: GGGCAGTGTCTGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACTGTGTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR GCA 72 bp ATTTTATACAACACAGTAAGAATCAACATCTTAGGATaGGTCTGGTCATATCTATTAGGCATGGCACAGACA +
Preference number: 3 (lower is better)
Translates to: ILYNTVRINILG*VWSYLLGMAQT
Trigger: TGTCTGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACTGTGTTGTATAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR TCA 72 bp ACTGGTGGTTACAGAAAGTGTACAAACCACATCATCTaGCTTGTTTCCTGTTTTAGATACAAAACTAATCCA +
Preference number: 3 (lower is better)
Translates to: TGGYRKCTNHII*LVSCFRYKTNP
Trigger: TGGATTAGTTTTGTATCTAAAACAGGAAACAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CTTTGGCAGTCAGGTGTTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCGAGGCTACAGGCAGGTaGGAGAGGCGTGGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: LWQSGVRSPGPGRDSPSVEATGR*ERRGGG
Trigger: ACCCCCGCCACGCCTCTCCCACCTGCCTGTAGCCTC...GACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAACACCTGACTGCCAAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGCACCAGGGTGCCGGCTaGCAGCCGCTCGGGTACATG +
Preference number: 4 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRHQGAG*QPLGYM
Trigger: CATGTACCCGAGCGGCTGGCAGCCGGCACCCTGGTG...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGGTCCTGGCTGCAGGCTaGCCCTGTGTACCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRVLAAG*PCVPRG
Trigger: CCCTCGGGGTACACAGGGCCAGCCTGCAGCCAGGAC...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGTGGCAGGTGCCCCCATaGCGGCACGGTTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRWQVPP*RHGWLW
Trigger: CCACAGCCAACCGTGCCGCCATGGGGGCACCTGCCA...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp CCTGAACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTGCATCTCAAGCCTCTTaGGGCGAGCGCGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PEPGGVAQKQAPPTFQHTASQAS*GERGQQ
Trigger: CTGCTGCCCGCGCTCGCCGCAAGAGGCTTGAGATGC...AGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGTTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp CTTTGGCAGTCAGGTGTTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCGCCAGTCCAGCCGCTaGGGCACTCACAGTGGTACT +
Preference number: 4 (lower is better)
Translates to: LWQSGVRSPGPGRDSPSVRQSSR*GTHSGT
Trigger: AGTACCACTGTGAGTGCCGCAGCGGCTGGACTGGCG...GACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAACACCTGACTGCCAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp CTTTGGCAGTCAGGTGTTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCTACATGAGGTGCAGCTaGGAGGGCAGCGGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LWQSGVRSPGPGRDSPSVYMRCS*EGSGGS
Trigger: GGAGCCTCCGCTGCCCTCGCAGCTGCACCTCATGTA...GACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAACACCTGACTGCCAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp CTTTGGCAGTCAGGTGTTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCTATCGGGCAGCCAAGTaGAAGGCGGTCTCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: LWQSGVRSPGPGRDSPSVYRAAK*KAVSPV
Trigger: CACCGGGGAGACCGCCTTGCACTTGGCTGCCCGATA...GACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAACACCTGACTGCCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGACCCAGGGCAGTGCCATaGAGCTGTGGGCTGCGCACC +
Preference number: 4 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGPRAVP*SCGLRT
Trigger: GGTGCGCAGCCCACAGCTGCATGGCACTGCCCTGGG...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CTTTGGCAGTCAGGTGTTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCATCTTGCCTGCAGGTaGGGCCATGGAAGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: LWQSGVRSPGPGRDSPSVHLACR*GHGSQA
Trigger: CGCCTGGCTTCCATGGCCCCACCTGCAGGCAAGATG...GACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAACACCTGACTGCCAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGATCAGGGAACCAGAGCTaGCCATGCTGCCGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGSGNQS*PCCRRR
Trigger: GCGCCGGCGGCAGCATGGCCAGCTCTGGTTCCCTGA...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGCCCCTGAGGCGGTGTTaGGGCCATGGCAGACATGCG +
Preference number: 4 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRPLRRC*GHGRHA
Trigger: CGCATGTCTGCCATGGCCCCAACACCGCCTCAGGGG...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CTTTGGCAGTCAGGTGTTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCTGGTGGTGGGCGGGCTaGAGATGCCCTCGGACCAAT +
Preference number: 4 (lower is better)
Translates to: LWQSGVRSPGPGRDSPSVWWWAG*RCPRTN
Trigger: ATTGGTCCGAGGGCATCTCCAGCCCGCCCACCACCA...GACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAACACCTGACTGCCAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCACACGGTCCTGGCAGGTaGCCCCATGGCGGCACGGTT +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGAHGPGR*PHGGTV
Trigger: AACCGTGCCGCCATGGGGGCACCTGCCAGGACCGTG...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp CCTGAACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTTCAGCAGCGTCCAGGTaGTGCTGGGTCCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: PEPGGVAQKQAPPTFQHTSAASR*CWVHCL
Trigger: CAGGCAGTGGACCCAGCAGCACCTGGACGCTGCTGA...AGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGTTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp CTTTGGCAGTCAGGTGTTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCACCTCCAGCCAGTGCTaGCATCTCAGGCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LWQSGVRSPGPGRDSPSVTSSQC*HLRLGC
Trigger: GCAGCCAAGCCTGAGATGGCAGCACTGGCTGGAGGT...GACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAACACCTGACTGCCAAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGGGCACTGGCCACCATTaGCACAGGGGTTGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRGTGHH*HRGWRH
Trigger: GTGCCTCCAACCCCTGTGCCAATGGTGGCCAGTGCC...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGCACTCATCCACGTCCTaGCTGCAGGCTGGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRHSSTS*LQAGPV
Trigger: CACAGGGCCAGCCTGCAGCCAGGACGTGGATGAGTG...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CTTTGGCAGTCAGGTGTTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTGCCATTGGTGTTCTaGCAGGAGGCCCCATGGCGA +
Preference number: 4 (lower is better)
Translates to: LWQSGVRSPGPGRDSPSVLPLVF*QEAPWR
Trigger: TCGCCATGGGGCCTCCTGCCAGAACACCAATGGCAG...GACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAACACCTGACTGCCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGAACAGGGGCTGCTGGCTaGGAACTGGCACTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGTGAAG*ELALRA
Trigger: GGCCCTGAGTGCCAGTTCCCAGCCAGCAGCCCCTGT...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGGTGTGGGAGACAGAGTaGGTGTGCCACCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRVWETE*VCHPGQ
Trigger: CTGCCCTGGGTGGCACACCCACTCTGTCTCCCACAC...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGCACAAGCCAGCCCTTTaGTGCTGGGCTTGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRHKPAL*CWACGP
Trigger: AGGCCCGCAAGCCCAGCACCAAAGGGCTGGCTTGTG...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CCTGAACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTGAGGAAGGGGTGCTCTaGCACCTGCAGCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: PEPGGVAQKQAPPTFQHTEEGVL*HLQLVA
Trigger: AGCCACCAGCTGCAGGTGCCAGAGCACCCCTTCCTC...AGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGTTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCAGGGACGGCATGGTGGTaGGCGGGCTGGAGATGCCCT +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGAGTAWW*AGWRCP
Trigger: AGGGCATCTCCAGCCCGCCCACCACCATGCCGTCCC...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp CCTGAACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCTGCCGAGCTCACACTaGGGTGTGGCTGTGATGGTG +
Preference number: 4 (lower is better)
Translates to: PEPGGVAQKQAPPTFQHTLPSSH*GVAVMV
Trigger: CACCATCACAGCCACACCTCAGTGTGAGCTCGGCAG...AGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGATGCCATCCTCACAAGTaGCCCCGTTGTGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGCHPHK*PRCGRG
Trigger: GCCCCTGCCACAACGGGGGCACTTGTGAGGATGGCA...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGACGTCCTCACAGTAGCTaGCCGTGTAGCCTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGRPHSS*PCSLPG
Trigger: GCCAGGCAGGCTACACGGGCAGCTACTGTGAGGACG...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCAGGCAGCCGGCCGAGTTaGACTGGCTGTCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGAGSRPS*TGCHSG
Trigger: GCCACTGTGACAGCCAGTGCAACTCGGCCGGCTGCC...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CCTGAACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAGGCAGGTCCCACTTaGCTGGGAGCATCTCAAGCC +
Preference number: 4 (lower is better)
Translates to: PEPGGVAQKQAPPTFQHTQAGPT*LGASQA
Trigger: GGCTTGAGATGCTCCCAGCCAAGTGGGACCTGCCTG...AGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATCCTCGGACAGGCACGTaGGGTCATGGTAGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: STLKACPHPGQFGDQRPHPRTGT*GHGSPR
Trigger: CCGAGGGCTACCATGACCCCACGTGCCTGTCCGAGG...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CCTGAACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTAGCGGTAGCTGCCATTaGTGTTCTGGCAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: PEPGGVAQKQAPPTFQHTSGSCH*CSGRRP
Trigger: GGGCCTCCTGCCAGAACACCAATGGCAGCTACCGCT...AGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CCTGAACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTGCAGGTGGGACTACGTaGGCCCGAGATGCATGTACC +
Preference number: 4 (lower is better)
Translates to: PEPGGVAQKQAPPTFQHTAGGTT*ARDACT
Trigger: GGTACATGCATCTCGGGCCCACGTAGTCCCACCTGC...AGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCACCGGTGCGGTCTGTCTaGTTGTGCAAGCTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGAPVRSV*LCKLAP
Trigger: GGGCGCCAGCTTGCACAACCAGACAGACCGCACCGG...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CTTTGGCAGTCAGGTGTTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCAGGATGGCAGTGATGTaGGCAGGGCCTGGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: LWQSGVRSPGPGRDSPSVRMAVM*AGPGFP
Trigger: AGGAAAGCCAGGCCCTGCCCACATCACTGCCATCCT...GACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAACACCTGACTGCCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGCGCAGTCATCCAGGTTaGTCTCACAGTTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRRSHPG*SHSWAL
Trigger: CAGGGCCCAACTGTGAGATCAACCTGGATGACTGCG...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp CCTGAACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCGCAGAAGGCTGTGTTaGTGCCATCGGTGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PEPGGVAQKQAPPTFQHTRRRLC*CHRCRN
Trigger: GTTCCTGCACCGATGGCATCAACACAGCCTTCTGCG...AGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGACATTCTTCAGGGGCTTaGGGCCGACTGAGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGHSSGA*GRLSPR
Trigger: GCGAGGACTCAGTCGGCCTCAAGCCCCTGAAGAATG...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp CTTTGGCAGTCAGGTGTTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCGGTCCATGTGATCCGTaGTGTCCCGGTTGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: LWQSGVRSPGPGRDSPSVGPCDP*CPGWQS
Trigger: ACTTTGCCAACCGGGACATCACGGATCACATGGACC...GACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAACACCTGACTGCCAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGACAAGTAGCCATGGGGTaGCTCGAGGGAGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGQVAMG*LEGVHR
Trigger: CCTGTGGACTCCCTCGAGTCACCCCATGGCTACTTG...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCATGGGTCTGCACCAGGTaGGGCTGTGTTGCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGAWVCTR*GCVASR
Trigger: ACGGCTGGCAACACAGCCTCACCTGGTGCAGACCCA...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp CTTTGGCAGTCAGGTGTTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCGTTGAGGCATTTGCCTaGGTGCTCACAAGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: LWQSGVRSPGPGRDSPSVVEAFA*VLTRVG
Trigger: GCCAACCCTTGTGAGCACGCAGGCAAATGCCTCAAC...GACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAACACCTGACTGCCAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp CCTGAACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAGAGTCACAGGGGTTaGTGGCGCAGTCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: PEPGGVAQKQAPPTFQHTQSHRG*WRSHPG
Trigger: ACCTGGATGACTGCGCCAGCAACCCCTGTGACTCTG...AGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp CCTGAACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTAGCCGCTCGGGTACATaGTCAGCACAGTCTAGGCCA +
Preference number: 4 (lower is better)
Translates to: PEPGGVAQKQAPPTFQHTSRSGT*SAQSRP
Trigger: TGGCCTAGACTGTGCTGAGCATGTACCCGAGCGGCT...AGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCAGGGCCATGGCAGACATaGGCAGGTCAGCAGCGTCCA +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGAGPWQT*AGQQRP
Trigger: TGGACGCTGCTGACCTGCGCATGTCTGCCATGGCCC...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCAAGGCGGTCTCCCCGGTaGGGTCTGTCTGGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGARRSPR*GLSGCA
Trigger: TGCACAACCAGACAGACCGCACCGGGGAGACCGCCT...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGAGAGACAGAGTGGGTGTaGCACCCAGGGCAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGETEWV*HPGQCH
Trigger: ATGGCACTGCCCTGGGTGGCACACCCACTCTGTCTC...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGATGGGGCAGAATGGTGTaGACAGGCAGACTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGWGRMV*TGRLLG
Trigger: CCCCAGCAGTCTGCCTGTGCACACCATTCTGCCCCA...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp ACAGTGGGGCAGGGCAGGGGAGAAGTACTCCCAAGGCCCATAAACACTACTACAGGGTGCTCTGGCACCTaGAGCTGGTGGCTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: TVGQGRGEVLPRPINTTTGCSGT*SWWLGV
Trigger: CACCCCCAGCCACCAGCTGCAGGTGCCAGAGCACCC...TGTAGTAGTGTTTATGGGCCTTGGGAGTACTTCTCCCCTGCCCTGCCCCACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGAGGGGCTGGTAGCACATaGGGCCAACACCACCTCACA +
Preference number: 4 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGGAGST*GQHHLT
Trigger: TGTGAGGTGGTGTTGGCCCCATGTGCTACCAGCCCC...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGGCCCGTGAAGCCAGGTaGACACAGACAGGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRAREAR*TQTGEG
Trigger: TCCTTCACCTGTCTGTGTCCACCTGGCTTCACGGGC...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCAATCCACGGGCGGTGTTaGAGGCCACGGCACAGACAC +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGAIHGRC*RPRHRH
Trigger: GTGTCTGTGCCGTGGCCTCCAACACCGCCCGTGGAT...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp CCTGAACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTGAAGCACTGCGAGGATaGCTGCACACATTGCCGGTT +
Preference number: 4 (lower is better)
Translates to: PEPGGVAQKQAPPTFQHTEALRG*LHTLPV
Trigger: AACCGGCAATGTGTGCAGTCATCCTCGCAGTGCTTC...AGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp CTTTGGCAGTCAGGTGTTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCTCTCCCCACTCGTTCTaGTTGTCGTCCATCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LWQSGVRSPGPGRDSPSVSPHSF*LSSIRA
Trigger: TGCTCTGATGGACGACAATCAGAACGAGTGGGGAGA...GACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAACACCTGACTGCCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATACCTGCCACCATTCTTaGAGGGAGCCGAGTCGCACC +
Preference number: 4 (lower is better)
Translates to: STLKACPHPGQFGDQRPHTCHHS*REPSRT
Trigger: GGTGCGACTCGGCTCCCTGCAAGAATGGTGGCAGGT...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATGCACACAGTTCTGGGTaGCACGTGGGTCACAGGGGT +
Preference number: 4 (lower is better)
Translates to: STLKACPHPGQFGDQRPHAHSSG*HVGHRG
Trigger: ACCCCTGTGACCCACGTGGCACCCAGAACTGTGTGC...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGAGAGCGCTTGATTGGGTaGTTGCGCAGCTCTTCCTCG +
Preference number: 4 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGERLIG*LRSSSS
Trigger: CGAGGAAGAGCTGCGCAAGCACCCAATCAAGCGCTC...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp ACAGTGGGGCAGGGCAGGGGAGAAGTACTCCCAAGGCCCATAAACACTACTACATGCCACCCAGGGCAGTaGCATGCAGCTGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TVGQGRGEVLPRPINTTTCHPGQ*HAAVGC
Trigger: GCAGCCCACAGCTGCATGGCACTGCCCTGGGTGGCA...TGTAGTAGTGTTTATGGGCCTTGGGAGTACTTCTCCCCTGCCCTGCCCCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATCAGGTGAGGCTGTGTTaGCAGCCGTGTGTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: STLKACPHPGQFGDQRPHQVRLC*QPCVGQ
Trigger: CTGCCCAACACACGGCTGGCAACACAGCCTCACCTG...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGTGTAAGTTCTGTGGCTaGACCTGCTGGGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRCKFCG*TCWVCT
Trigger: GGTGCAGACCCAGCAGGTGCAGCCACAGAACTTACA...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp ACAGTGGGGCAGGGCAGGGGAGAAGTACTCCCAAGGCCCATAAACACTACTACAAAGCTCCGGCCCAGGTaGCCATTGGCTGCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: TVGQGRGEVLPRPINTTTKLRPR*PLAAEL
Trigger: GAGCTCGGCAGCCAATGGGCACCTGGGCCGGAGCTT...TGTAGTAGTGTTTATGGGCCTTGGGAGTACTTCTCCCCTGCCCTGCCCCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp ACAGTGGGGCAGGGCAGGGGAGAAGTACTCCCAAGGCCCATAAACACTACTACACAAGTGCCCCCGTTGTaGCAGGGGCTGCCCGCACAT +
Preference number: 4 (lower is better)
Translates to: TVGQGRGEVLPRPINTTTQVPPL*QGLPAH
Trigger: ATGTGCGGGCAGCCCCTGCCACAACGGGGGCACTTG...TGTAGTAGTGTTTATGGGCCTTGGGAGTACTTCTCCCCTGCCCTGCCCCACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCACTCCCCGACGAAGCCTaGTGGGCAGGTGCAGGTATA +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGALPDEA*WAGAGI
Trigger: TATACCTGCACCTGCCCACCAGGCTTCGTCGGGGAG...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATCGCTGCACACAGTTCTaGGTGCCACGTGGGTCACAG +
Preference number: 4 (lower is better)
Translates to: STLKACPHPGQFGDQRPHRCTQF*VPRGSQ
Trigger: CTGTGACCCACGTGGCACCCAGAACTGTGTGCAGCG...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CAGTCCGTCTGTCCTCAGTTGGATTTGGATGATGCTGTTTGGAGGGATGCACAGCAGCGGCGTCCAGTGTaGCCAGCCCGGCACTCGCAG +
Preference number: 4 (lower is better)
Translates to: QSVCPQLDLDDAVWRDAQQRRPV*PARHSQ
Trigger: CTGCGAGTGCCGGGCTGGCCACACTGGACGCCGCTG...CTGTGCATCCCTCCAAACAGCATCATCCAAATCCAACTGAGGACAGACGGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CCTGAACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTTCATGGGTGGGACCATaGAGGATGGCAGTGATGTGG +
Preference number: 4 (lower is better)
Translates to: PEPGGVAQKQAPPTFQHTSWVGP*RMAVMW
Trigger: CCACATCACTGCCATCCTCCATGGTCCCACCCATGA...AGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCATACTGTTGCACTCGTTaGCCTCGGACAGGCACGTGG +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGAYCCTR*PRTGTW
Trigger: CCACGTGCCTGTCCGAGGTCAACGAGTGCAACAGTA...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCAGCTGGCACAGGAGAGTaGCGTCAATGCCTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGAAGTGE*RQCLAS
Trigger: AGAAGCGAGGCATTGACGTCACTCTCCTGTGCCAGC...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGACTTGCGCATCACGCTTaGAGACCACGTTGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGLAHHA*RPRWCA
Trigger: TGCACACCAACGTGGTCTTCAAGCGTGATGCGCAAG...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGCATCAGAGCACCATCTaGGGCATTCTTCAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRHQSTI*GILQGL
Trigger: AAGCCCCTGAAGAATGCCTCAGATGGTGCTCTGATG...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATGGCAATCGGTCCATGTaGTCCGTGATGTCCCGGTTG +
Preference number: 4 (lower is better)
Translates to: STLKACPHPGQFGDQRPHGNRSM*SVMSRL
Trigger: CAACCGGGACATCACGGATCACATGGACCGATTGCC...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATTACCAGGCAGGTGGCTaGGAGGCATGGATGGAGACT +
Preference number: 4 (lower is better)
Translates to: STLKACPHPGQFGDQRPHYQAGG*EAWMET
Trigger: AGTCTCCATCCATGCCTCTCAGCCACCTGCCTGGTA...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGCACTCATTAACATCTTaGCTGCAGGTGGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRHSLTS*LQVGPW
Trigger: CCATGGCCCCACCTGCAGGCAAGATGTTAATGAGTG...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGAAGCCTTCTCGGCAGGTaGATACGTAGCCACTGGTCA +
Preference number: 4 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGSLLGR*IRSHWS
Trigger: TGACCAGTGGCTACGTATGCACCTGCCGAGAAGGCT...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCAAGAGGCAGCGGTAGCTaGCATTGGTGTTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGARGSGS*HWCSGR
Trigger: CCTGCCAGAACACCAATGGCAGCTACCGCTGCCTCT...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCATGGTCTGCCAGCACCTaGCACCATTCTTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGAWSAST*HHSCRE
Trigger: CTCCCTGCAAGAATGGTGGCAGGTGCTGGCAGACCA...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATGATTGTAGCAGGGGTTaGTACCCACACAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: STLKACPHPGQFGDQRPHDCSRG*YPHRGC
Trigger: GCAGCCCCTGTGTGGGTAGCAACCCCTGCTACAATC...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGATCATCTGCTGGCCTTaGGCATCACGCTTGAAGACC +
Preference number: 4 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRIICWP*ASRLKT
Trigger: GGTCTTCAAGCGTGATGCGCAAGGCCAGCAGATGAT...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGATCAGAGATGTTGGAATaGGGGGAGGAGCTGGACCAC +
Preference number: 4 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGSEMLE*GEELDH
Trigger: GTGGTCCAGCTCCTCCCCGCATTCCAACATCTCTGA...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATGGTTGGTGTCACAGTTaGAGCCCTCGTTGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: STLKACPHPGQFGDQRPHGWCHS*SPRCRG
Trigger: ACCCCTGCAACGAGGGCTCCAACTGTGACACCAACC...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATGCCCATCCAGGCACTTaGCACCGTTCTTGCATGGTG +
Preference number: 4 (lower is better)
Translates to: STLKACPHPGQFGDQRPHAHPGT*HRSCMV
Trigger: CACCATGCAAGAACGGTGCCAAGTGCCTGGATGGGC...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATGCCCGGCACTCGCAGTaGAAGTCATTAACACGCTGC +
Preference number: 4 (lower is better)
Translates to: STLKACPHPGQFGDQRPHARHSQ*KSLTRC
Trigger: GCAGCGTGTTAATGACTTCCACTGCGAGTGCCGGGC...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGAACATCGGTGGCACTCTaGAAGCACTGCGAGGATGAC +
Preference number: 4 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGTSVAL*KHCEDD
Trigger: GTCATCCTCGCAGTGCTTCCAGAGTGCCACCGATGT...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp ACAGTGGGGCAGGGCAGGGGAGAAGTACTCCCAAGGCCCATAAACACTACTACAGCGGTGTTGGGGCCATaGCAGACATGCGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: TVGQGRGEVLPRPINTTTAVLGP*QTCAGQ
Trigger: CTGACCTGCGCATGTCTGCCATGGCCCCAACACCGC...TGTAGTAGTGTTTATGGGCCTTGGGAGTACTTCTCCCCTGCCCTGCCCCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CCTGAACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTTGTTGTCCTGGATGTTaGCATCTGCACTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PEPGGVAQKQAPPTFQHTCCPGC*HLHWPP
Trigger: TGGAGGCCAGTGCAGATGCCAACATCCAGGACAACA...AGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGTTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CTTTGGCAGTCAGGTGTTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCTCTGCATGTCCTTGTTaGCTCCGTTCTTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LWQSGVRSPGPGRDSPSVSACPC*LRSSGA
Trigger: TGCTCCTGAAGAACGGAGCCAACAAGGACATGCAGA...GACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAACACCTGACTGCCAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGGGTCCAGCAACACTTTaGCAGTCTCATAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRGPATL*QSHSCP
Trigger: AGGGCAGCTATGAGACTGCCAAAGTGTTGCTGGACC...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp ACAGTGGGGCAGGGCAGGGGAGAAGTACTCCCAAGGCCCATAAACACTACTACACCAGCCCTTTGGTGCTaGGCTTGCGGGCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: TVGQGRGEVLPRPINTTTPALWC*ACGPSC
Trigger: GCAAGAAGGCCCGCAAGCCCAGCACCAAAGGGCTGG...TGTAGTAGTGTTTATGGGCCTTGGGAGTACTTCTCCCCTGCCCTGCCCCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCACAGGGGTCAGCCTGCTaGCATGATTTTCCTGACCAC +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGAQGSAC*HDFPDH
Trigger: GTGGTCAGGAAAATCATGTCAGCAGGCTGACCCCTG...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGAGCAGCGACAGATGTATaGAGACTCAAAGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGAATDV*RLKGQA
Trigger: TGCCTGCCCTTTGAGTCTTCATACATCTGTCGCTGC...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCACGCCAGTCCACCCATTaGCACACACACAGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGARQSTH*HTHSCS
Trigger: GCTACAACTGTGTGTGTGTCAATGGGTGGACTGGCG...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGCAAGTGGCATCATTCTaGCATGGGTTGGAGATGCAC +
Preference number: 4 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRQVASF*HGLEMH
Trigger: GTGCATCTCCAACCCATGTCAGAATGATGCCACTTG...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCACAAGGTTCTGGCAGTTaGGACCAGTGTAGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGAQGSGS*DQCSPV
Trigger: CACAGGGCTACACTGGTCTCAACTGCCAGAACCTTG...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCATACTGCGTGTTGGTCTaGCAGCACCTGCCACCATTC +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGAYCVLV*QHLPPF
Trigger: GAATGGTGGCAGGTGCTGGCAGACCAACACGCAGTA...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp CTTTGGCAGTCAGGTGTTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCAAGTCATTAACACGCTaGACACAGTTCTGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LWQSGVRSPGPGRDSPSVKSLTR*TQFWVP
Trigger: TGGCACCCAGAACTGTGTGCAGCGTGTTAATGACTT...GACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAACACCTGACTGCCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATAGACACCCCCATTCTTaGAAGGTTTGCCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: STLKACPHPGQFGDQRPHRHPHS*KVCPCS
Trigger: GCTGCAGGGGCAAACCTTGCAAGAATGGGGGTGTCT...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATTACGGGAAGATCATCTaGTGGCCTTGCGCATCACGC +
Preference number: 4 (lower is better)
Translates to: STLKACPHPGQFGDQRPHYGKII*WPCASR
Trigger: GCGTGATGCGCAAGGCCAGCAGATGATCTTCCCGTA...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCACACTGCGAGGATGACTaGACACATTGCCGGTTGTCG +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGAHCEDD*THCRLS
Trigger: CGACAACCGGCAATGTGTGCAGTCATCCTCGCAGTG...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGGGAGTTGTGCCATCATaGATTCGGGCATCCAGATCT +
Preference number: 4 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRGVVPS*IRASRS
Trigger: AGATCTGGATGCCCGAATGCATGATGGCACAACTCC...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp ACAGTGGGGCAGGGCAGGGGAGAAGTACTCCCAAGGCCCATAAACACTACTACATCAAAGGGCAGGCACTaGCCACCATTGGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: TVGQGRGEVLPRPINTTTSKGRH*PPLAQG
Trigger: CCCCTGTGCCAATGGTGGCCAGTGCCTGCCCTTTGA...TGTAGTAGTGTTTATGGGCCTTGGGAGTACTTCTCCCCTGCCCTGCCCCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CTTTGGCAGTCAGGTGTTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCTCTTGCATGGTGTGCTaGCACACTCATCCACATCAT +
Preference number: 4 (lower is better)
Translates to: LWQSGVRSPGPGRDSPSVSCMVC*HTHPHH
Trigger: ATGATGTGGATGAGTGTGCCAGCACACCATGCAAGA...GACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAACACCTGACTGCCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCACGGCACGGTTGGCTGTaGCACTCATTGATGTTGGTC +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGARHGWL*HSLMLV
Trigger: GACCAACATCAATGAGTGCCACAGCCAACCGTGCCG...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATCAGGTAGCTCCATTCTaGCAGGGGTTAGGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: STLKACPHPGQFGDQRPHQVAPF*QGLGEH
Trigger: GTGCTCACCTAACCCCTGCCAGAATGGAGCTACCTG...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CCTGAACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTTGGCCATCACTGAAGTaGTCCTTGCAGTACTGGTCA +
Preference number: 4 (lower is better)
Translates to: PEPGGVAQKQAPPTFQHTWPSLK*SLQYWS
Trigger: TGACCAGTACTGCAAGGACCACTTCAGTGATGGCCA...AGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGTTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATGCTGAGAGGCATGGATaGAGACTGCTGGAATGGGGA +
Preference number: 4 (lower is better)
Translates to: STLKACPHPGQFGDQRPHAERHG*RLLEWG
Trigger: TCCCCATTCCAGCAGTCTCCATCCATGCCTCTCAGC...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATGTGGGTTGTACTGGCTaGGCACCATGCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: STLKACPHPGQFGDQRPHVGCTG*APCHSG
Trigger: TCCAGAATGGCATGGTGCCCAGCCAGTACAACCCAC...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGATCGGGGACAAGGTATTaGTGGAGAGGCTGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGSGTRY*WRGCCV
Trigger: TACACAGCAGCCTCTCCACCAATACCTTGTCCCCGA...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp ACAGTGGGGCAGGGCAGGGGAGAAGTACTCCCAAGGCCCATAAACACTACTACAGGAATGTGGGTGATCTaGGACGGCATGGTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: TVGQGRGEVLPRPINTTTGMWVI*DGMVVG
Trigger: GCCCACCACCATGCCGTCCCAGATCACCCACATTCC...TGTAGTAGTGTTTATGGGCCTTGGGAGTACTTCTCCCCTGCCCTGCCCCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp ACAGTGGGGCAGGGCAGGGGAGAAGTACTCCCAAGGCCCATAAACACTACTACAGCCCTGTGGTTCCCTTaGGGCATAAGCAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: TVGQGRGEVLPRPINTTTALWFP*GISRGR
Trigger: CCTACCTCTGCTTATGCCTCAAGGGAACCACAGGGC...TGTAGTAGTGTTTATGGGCCTTGGGAGTACTTCTCCCCTGCCCTGCCCCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGATGCTGGCACATTCATTaGTGTCCTCCTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGCWHIH*CPPHRR
Trigger: CCTTCTGTGAGGAGGACATCAATGAATGTGCCAGCA...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp ACAGTGGGGCAGGGCAGGGGAGAAGTACTCCCAAGGCCCATAAACACTACTACAGCAGCCATTGATGACTaGCTCACAGCGGCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: TVGQGRGEVLPRPINTTTAAIDD*LTAASS
Trigger: ACTGGACGCCGCTGTGAGTCAGTCATCAATGGCTGC...TGTAGTAGTGTTTATGGGCCTTGGGAGTACTTCTCCCCTGCCCTGCCCCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCAACTTGGCACCGTTCTTaGATGGTGTGCTGGCACACT +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGATWHRS*MVCWHT
Trigger: AGTGTGCCAGCACACCATGCAAGAACGGTGCCAAGT...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp ACAGTGGGGCAGGGCAGGGGAGAAGTACTCCCAAGGCCCATAAACACTACTACAGAAGCCACACGGTCGTaGCAAGTGGCACCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: TVGQGRGEVLPRPINTTTEATRS*QVAPWK
Trigger: TTTCCAGGGTGCCACTTGCCACGACCGTGTGGCTTC...TGTAGTAGTGTTTATGGGCCTTGGGAGTACTTCTCCCCTGCCCTGCCCCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCATGCATACGTAGCCACTaGTCATGTCCTTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGACIRSH*SCPCRC
Trigger: GCACCTGCAAGGACATGACCAGTGGCTACGTATGCA...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGACGTGGCTCCTGTATATaGCAGAGGACAGTTGCACTT +
Preference number: 4 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGRGSCI*QRTVAL
Trigger: AAGTGCAACTGTCCTCTGCCATATACAGGAGCCACG...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCAGACCTTGCCAGCCTGTaGGACAGACACAGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGADLASL*DRHRKN
Trigger: GTTTTTCCTGTGTCTGTCCCACAGGCTGGCAAGGTC...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGCAATTGGCACCATTTTaGCAGGGATTGCTGGCACAT +
Preference number: 4 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRQLAPF*QGLLAH
Trigger: ATGTGCCAGCAATCCCTGCCAAAATGGTGCCAATTG...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CAGTCCGTCTGTCCTCAGTTGGATTTGGATGATGCTGTTTGGAGGGATGCACAGCTCCTCAATCTGCGGTaGGGGAATGTCGCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: QSVCPQLDLDDAVWRDAQLLNLR*GNVAPS
Trigger: GCTGGGCGCGACATTCCCCCACCGCAGATTGAGGAG...CTGTGCATCCCTCCAAACAGCATCATCCAAATCCAACTGAGGACAGACGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp ACAGTGGGGCAGGGCAGGGGAGAAGTACTCCCAAGGCCCATAAACACTACTACATTGGTGTGCAGCACGTaGCTGAGCTCCCGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: TVGQGRGEVLPRPINTTTLVCST*LSSRRK
Trigger: CTTTCTGCGGGAGCTCAGCCACGTGCTGCACACCAA...TGTAGTAGTGTTTATGGGCCTTGGGAGTACTTCTCCCCTGCCCTGCCCCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCATGTAGAGCGCTTGATTaGGTGCTTGCGCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGACRALD*VLAQLF
Trigger: GAAGAGCTGCGCAAGCACCCAATCAAGCGCTCTACA...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATGGCTGTGGCACTCATTaGTGTTGGTCTCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: STLKACPHPGQFGDQRPHGCGTH*CWSHSD
Trigger: ATCACTGTGAGACCAACATCAATGAGTGCCACAGCC...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCAATCTGGAAGACACCCTaGGCATCTGCAGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGAIWKTP*ASAETA
Trigger: AGCAGTTTCTGCAGATGCTCAGGGTGTCTTCCAGAT...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp ACAGTGGGGCAGGGCAGGGGAGAAGTACTCCCAAGGCCCATAAACACTACTACACACTCACAGTGGTACTaGGTGTTGGTCTGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: TVGQGRGEVLPRPINTTTHSQWY*VLVCQH
Trigger: GTGCTGGCAGACCAACACGCAGTACCACTGTGAGTG...TGTAGTAGTGTTTATGGGCCTTGGGAGTACTTCTCCCCTGCCCTGCCCCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp TTCAAGTCCACACTGGTGGTTACAGAAAGTGTACAAACCACATCATCTGACTTGGCTGCCGCCGGCGCTTaGGGGACAGCAGCACCCCAC +
Preference number: 4 (lower is better)
Translates to: FKSTLVVTESVQTTSSDLAAAGA*GTAAPH
Trigger: GTGGGGTGCTGCTGTCCCGCAAGCGCCGGCGGCAGC...CAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGACTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CTTTGGCAGTCAGGTGTTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTTGCAGTTGTTTCCTaGACAGTCATCCACATTTTC +
Preference number: 4 (lower is better)
Translates to: LWQSGVRSPGPGRDSPSVLAVVS*TVIHIF
Trigger: GAAAATGTGGATGACTGTCCAGGAAACAACTGCAAG...GACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAACACCTGACTGCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATGGAAACAGGCGGCACTaGCACAGTCATCAATGTTCT +
Preference number: 4 (lower is better)
Translates to: STLKACPHPGQFGDQRPHGNRRH*HSHQCS
Trigger: AGAACATTGATGACTGTGCCAGTGCCGCCTGTTTCC...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CAGTCCGTCTGTCCTCAGTTGGATTTGGATGATGCTGTTTGGAGGGATGCACAGTGGCAAGTGGCACCCTaGAAACAGGCGGCACTGGCA +
Preference number: 4 (lower is better)
Translates to: QSVCPQLDLDDAVWRDAQWQVAP*KQAALA
Trigger: TGCCAGTGCCGCCTGTTTCCAGGGTGCCACTTGCCA...CTGTGCATCCCTCCAAACAGCATCATCCAAATCCAACTGAGGACAGACGGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGATCGTTGATGTTGGTCTaGCAATTAGGGCCACTGAAG +
Preference number: 4 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGSLMLV*QLGPLK
Trigger: CTTCAGTGGCCCTAATTGCCAGACCAACATCAACGA...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CAGTCCGTCTGTCCTCAGTTGGATTTGGATGATGCTGTTTGGAGGGATGCACAGCAGCCCTTGCCATCCTaGGACTTCTTCCTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: QSVCPQLDLDDAVWRDAQQPLPS*DFFLRA
Trigger: GGCACGGAGGAAGAAGTCCCAGGATGGCAAGGGCTG...CTGTGCATCCCTCCAAACAGCATCATCCAAATCCAACTGAGGACAGACGGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CAGTCCGTCTGTCCTCAGTTGGATTTGGATGATGCTGTTTGGAGGGATGCACAGGGCACCATGCCATTCTaGAGCCGGGGAAGCCACTCA +
Preference number: 4 (lower is better)
Translates to: QSVCPQLDLDDAVWRDAQGTMPF*SRGSHS
Trigger: TGAGTGGCTTCCCCGGCTCCAGAATGGCATGGTGCC...CTGTGCATCCCTCCAAACAGCATCATCCAAATCCAACTGAGGACAGACGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR CAA 72 bp CCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTaGGATGATGCTGTTTGGAGGGATGCACAGAACAGT +
Preference number: 4 (lower is better)
Translates to: PRPGQSVCPQLD*DDAVWRDAQNS
Trigger: ACTGTTCTGTGCATCCCTCCAAACAGCATCATCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATGGCAGTCATCAACATTaGTCTCACAGTGTACACCCT +
Preference number: 4 (lower is better)
Translates to: STLKACPHPGQFGDQRPHGSHQH*SHSVHP
Trigger: AGGGTGTACACTGTGAGATCAATGTTGATGACTGCC...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp CAGTCCGTCTGTCCTCAGTTGGATTTGGATGATGCTGTTTGGAGGGATGCACAGGGTGGCTGCAGGTTCTaGGGCTGGAGCTGTAAGTTC +
Preference number: 4 (lower is better)
Translates to: QSVCPQLDLDDAVWRDAQGGCRF*GWSCKF
Trigger: GAACTTACAGCTCCAGCCTCAGAACCTGCAGCCACC...CTGTGCATCCCTCCAAACAGCATCATCCAAATCCAACTGAGGACAGACGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATAGTCTTCAGACTCCTTaGATACCCCGCTGTTTTTGC +
Preference number: 4 (lower is better)
Translates to: STLKACPHPGQFGDQRPHSLQTP*IPRCFC
Trigger: GCAAAAACAGCGGGGTATGCAAGGAGTCTGAAGACT...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp TTCATATTTTACAGACACACAGGGAACTTCACCCTGACCAGGAAAATCAAGGCTCAGAGCTGGCCATGCTaGCGCCGGCGCTTGCGGGAC +
Preference number: 4 (lower is better)
Translates to: FIFYRHTGNFTLTRKIKAQSWPC*RRRLRD
Trigger: GTCCCGCAAGCGCCGGCGGCAGCATGGCCAGCTCTG...AGCCTTGATTTTCCTGGTCAGGGTGAAGTTCCCTGTGTGTCTGTAAAATATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CAGTCCGTCTGTCCTCAGTTGGATTTGGATGATGCTGTTTGGAGGGATGCACAGTCAATGCAGGTCCCCTaGTTCAGGCAGGGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: QSVCPQLDLDDAVWRDAQSMQVP*FRQGLE
Trigger: CTCCAACCCCTGCCTGAACCAGGGGACCTGCATTGA...CTGTGCATCCCTCCAAACAGCATCATCCAAATCCAACTGAGGACAGACGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CAGTCCGTCTGTCCTCAGTTGGATTTGGATGATGCTGTTTGGAGGGATGCACAGAGTGCCATGCAGCTGTaGGCTGCGCACCAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: QSVCPQLDLDDAVWRDAQSAMQL*AAHQVV
Trigger: TACAACCTGGTGCGCAGCCCACAGCTGCATGGCACT...CTGTGCATCCCTCCAAACAGCATCATCCAAATCCAACTGAGGACAGACGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp ACAGTGGGGCAGGGCAGGGGAGAAGTACTCCCAAGGCCCATAAACACTACTACAGGGACAAGGTATTGGTaGAGAGGCTGCTGTGTAGTG +
Preference number: 4 (lower is better)
Translates to: TVGQGRGEVLPRPINTTTGTRYW*RGCCVV
Trigger: CACTACACAGCAGCCTCTCCACCAATACCTTGTCCC...TGTAGTAGTGTTTATGGGCCTTGGGAGTACTTCTCCCCTGCCCTGCCCCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp AGTAAGAATCAACATCTTAGGATGCGTCTGGTCATATCTATTAGGCATGGCACAGGGCTTGAGGCCGACTaGGTCCTCGCCGAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SKNQHLRMRLVISIRHGTGLEAD*VLAEGL
Trigger: GAGCCCCTCGGCGAGGACTCAGTCGGCCTCAAGCCC...TGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp AGTAAGAATCAACATCTTAGGATGCGTCTGGTCATATCTATTAGGCATGGCACATGGGGTCCAGCTCCCTaGGCTGGCGCCCACCACTGG +
Preference number: 4 (lower is better)
Translates to: SKNQHLRMRLVISIRHGTWGPAP*AGAHHW
Trigger: CCAGTGGTGGGCGCCAGCGCAGGGAGCTGGACCCCA...TGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp TTCAAGTCCACACTGGTGGTTACAGAAAGTGTACAAACCACATCATCTGACTTGAACCAGAGCTGGCCATaGTGCCGCCGGCGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: FKSTLVVTESVQTTSSDLNQSWP*CRRRLR
Trigger: CCGCAAGCGCCGGCGGCAGCATGGCCAGCTCTGGTT...CAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGACTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp CAGTCCGTCTGTCCTCAGTTGGATTTGGATGATGCTGTTTGGAGGGATGCACAGCATGCAGCTGTGGGCTaGGCACCAGGTTGTACTCAT +
Preference number: 4 (lower is better)
Translates to: QSVCPQLDLDDAVWRDAQHAAVG*APGCTH
Trigger: ATGAGTACAACCTGGTGCGCAGCCCACAGCTGCATG...CTGTGCATCCCTCCAAACAGCATCATCCAAATCCAACTGAGGACAGACGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCAGTGAATCACACTCATTaGCATCATACTGACAGTAGC +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGAVNHTH*HHTDSS
Trigger: GCTACTGTCAGTATGATGTCAATGAGTGTGATTCAC...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCAAGAGATGACAGCAGGTaGATCTTCTTCTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGARDDSR*IFFFFT
Trigger: AGTGAAGAAGAAGAAGATGCACCTGCTGTCATCTCT...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp ACAGTGGGGCAGGGCAGGGGAGAAGTACTCCCAAGGCCCATAAACACTACTACAACCAGTGTAGCCCTGTaGGCAGGTACACTTATAAGT +
Preference number: 4 (lower is better)
Translates to: TVGQGRGEVLPRPINTTTTSVAL*AGTLIS
Trigger: ACTTATAAGTGTACCTGCCCACAGGGCTACACTGGT...TGTAGTAGTGTTTATGGGCCTTGGGAGTACTTCTCCCCTGCCCTGCCCCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CAGTCCGTCTGTCCTCAGTTGGATTTGGATGATGCTGTTTGGAGGGATGCACAGTCTCCAGGTAGACAATaGAGCCACGGATGTCCATGG +
Preference number: 4 (lower is better)
Translates to: QSVCPQLDLDDAVWRDAQSPGRQ*SHGCPW
Trigger: CCATGGACATCCGTGGCTCCATTGTCTACCTGGAGA...CTGTGCATCCCTCCAAACAGCATCATCCAAATCCAACTGAGGACAGACGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp TTCAAGTCCACACTGGTGGTTACAGAAAGTGTACAAACCACATCATCTGACTTGGGCACAGGTGCCCGTTaGAGCCTTTGGGGCACTGAC +
Preference number: 4 (lower is better)
Translates to: FKSTLVVTESVQTTSSDLGTGAR*SLWGTD
Trigger: GTCAGTGCCCCAAAGGCTTCAACGGGCACCTGTGCC...CAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGACTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp TTCATATTTTACAGACACACAGGGAACTTCACCCTGACCAGGAAAATCAAGGCTCGCAGTGGATGCCATTaGAGCCCACGGGGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: FIFYRHTGNFTLTRKIKARSGCH*SPRGRY
Trigger: GTACCTGCCCCGTGGGCTTCAATGGCATCCACTGCG...AGCCTTGATTTTCCTGGTCAGGGTGAAGTTCCCTGTGTGTCTGTAAAATATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp CAGTCCGTCTGTCCTCAGTTGGATTTGGATGATGCTGTTTGGAGGGATGCACAGATTGACGTCAGCATGTaGGTTGATGAGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: QSVCPQLDLDDAVWRDAQIDVSM*VDEVLQ
Trigger: CTGGAGGACCTCATCAACTCACATGCTGACGTCAAT...CTGTGCATCCCTCCAAACAGCATCATCCAAATCCAACTGAGGACAGACGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp AAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGATACTGCAACCACCAGCACCAGGGTaGCGGCTGCCAGCCGCTCGG +
Preference number: 4 (lower is better)
Translates to: KHVFTDTYSATGVYLILQPPAPG*RLPAAR
Trigger: CCGAGCGGCTGGCAGCCGGCACCCTGGTGCTGGTGG...TTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TTCAAGTCCACACTGGTGGTTACAGAAAGTGTACAAACCACATCATCTGACTTGCACGGTCGTGGCAAGTaGCACCCTGGAAACAGGCGG +
Preference number: 4 (lower is better)
Translates to: FKSTLVVTESVQTTSSDLHGRGK*HPGNRR
Trigger: CCGCCTGTTTCCAGGGTGCCACTTGCCACGACCGTG...CAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGACTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TTCATATTTTACAGACACACAGGGAACTTCACCCTGACCAGGAAAATCAAGGCTGGCACCTGCAGCTGGTaGCTGGGGGTGTTGTCCACA +
Preference number: 4 (lower is better)
Translates to: FIFYRHTGNFTLTRKIKAGTCSW*LGVLST
Trigger: TGTGGACAACACCCCCAGCCACCAGCTGCAGGTGCC...AGCCTTGATTTTCCTGGTCAGGGTGAAGTTCCCTGTGTGTCTGTAAAATATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TTCATATTTTACAGACACACAGGGAACTTCACCCTGACCAGGAAAATCAAGGCTTCTGGCACCTGCAGCTaGTGGCTGGGGGTGTTGTCC +
Preference number: 4 (lower is better)
Translates to: FIFYRHTGNFTLTRKIKASGTCS*WLGVLS
Trigger: GGACAACACCCCCAGCCACCAGCTGCAGGTGCCAGA...AGCCTTGATTTTCCTGGTCAGGGTGAAGTTCCCTGTGTGTCTGTAAAATATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp AGTAAGAATCAACATCTTAGGATGCGTCTGGTCATATCTATTAGGCATGGCACATCTGGGACGGCATGGTaGTGGGCGGGCTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: SKNQHLRMRLVISIRHGTSGTAW*WAGWRC
Trigger: GCATCTCCAGCCCGCCCACCACCATGCCGTCCCAGA...TGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR CAA 72 bp AGTTTGGGGATCAGAGGCCACATAGCTTCTGTTTTCTaGGAGTCTCAATGCAGGCTACTCTGGCGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: SLGIRGHIASVF*ESQCRLLWRVH
Trigger: GTGGACTCGCCAGAGTAGCCTGCATTGAGACTCCAAGAAAACAGAAGCTATGTGGCCTCTGATCCCCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp TTCATATTTTACAGACACACAGGGAACTTCACCCTGACCAGGAAAATCAAGGCTCAGGGCACCTACAGATaGATCCACGGGCGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: FIFYRHTGNFTLTRKIKAQGTYR*IHGRCW
Trigger: CCAACACCGCCCGTGGATTCATCTGTAGGTGCCCTG...AGCCTTGATTTTCCTGGTCAGGGTGAAGTTCCCTGTGTGTCTGTAAAATATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp TTCAAGTCCACACTGGTGGTTACAGAAAGTGTACAAACCACATCATCTGACTTGTGTGCAGCACGTGGCTaGGCTCCCGCAGAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: FKSTLVVTESVQTTSSDLCAARG*APAESG
Trigger: TCCACTTTCTGCGGGAGCTCAGCCACGTGCTGCACA...CAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGACTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp TTCATATTTTACAGACACACAGGGAACTTCACCCTGACCAGGAAAATCAAGGCTTCTCATTGTGGCAGGTaGCTCCATGGCGGCACAGCC +
Preference number: 4 (lower is better)
Translates to: FIFYRHTGNFTLTRKIKASHCGR*LHGGTA
Trigger: GGCTGTGCCGCCATGGAGGCACCTGCCACAATGAGA...AGCCTTGATTTTCCTGGTCAGGGTGAAGTTCCCTGTGTGTCTGTAAAATATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp TTCATATTTTACAGACACACAGGGAACTTCACCCTGACCAGGAAAATCAAGGCTGCTGCCCGTGTAGCCTaGCTGGCAGTGGCAGTAATG +
Preference number: 4 (lower is better)
Translates to: FIFYRHTGNFTLTRKIKAAARVA*LAVAVM
Trigger: CATTACTGCCACTGCCAGGCAGGCTACACGGGCAGC...AGCCTTGATTTTCCTGGTCAGGGTGAAGTTCCCTGTGTGTCTGTAAAATATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp TTCATATTTTACAGACACACAGGGAACTTCACCCTGACCAGGAAAATCAAGGCTCTTTGGTGCTGGGCTTaGGGGCCTTCTTGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: FIFYRHTGNFTLTRKIKALWCWA*GPSCPV
Trigger: CACAGGGCAAGAAGGCCCGCAAGCCCAGCACCAAAG...AGCCTTGATTTTCCTGGTCAGGGTGAAGTTCCCTGTGTGTCTGTAAAATATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp TTCAAGTCCACACTGGTGGTTACAGAAAGTGTACAAACCACATCATCTGACTTGAAGCCAGCCCTTTGGTaGTGGGCTTGCGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: FKSTLVVTESVQTTSSDLKPALW*WACGPS
Trigger: AGAAGGCCCGCAAGCCCAGCACCAAAGGGCTGGCTT...CAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGACTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp TTCAAGTCCACACTGGTGGTTACAGAAAGTGTACAAACCACATCATCTGACTTGGGCATGGATGGAGACTaGTGGAATGGGGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: FKSTLVVTESVQTTSSDLGMDGD*WNGEGR
Trigger: CCTCCCCTCCCCATTCCAGCAGTCTCCATCCATGCC...CAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGACTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp TTCATATTTTACAGACACACAGGGAACTTCACCCTGACCAGGAAAATCAAGGCTATGCTGGAGGCCAGCTaGCTGTGTGCTCAGTGTGCC +
Preference number: 4 (lower is better)
Translates to: FIFYRHTGNFTLTRKIKAMLEAS*LCAQCA
Trigger: GGCACACTGAGCACACAGGCAGCTGGCCTCCAGCAT...AGCCTTGATTTTCCTGGTCAGGGTGAAGTTCCCTGTGTGTCTGTAAAATATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TTCAAGTCCACACTGGTGGTTACAGAAAGTGTACAAACCACATCATCTGACTTGGTTCTGGGTGCCACGTaGGTCACAGGGGTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: FKSTLVVTESVQTTSSDLVLGAT*VTGVGE
Trigger: CTCTCCAACCCCTGTGACCCACGTGGCACCCAGAAC...CAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGACTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp AGTAAGAATCAACATCTTAGGATGCGTCTGGTCATATCTATTAGGCATGGCACACCAGGCATAGGCAGGTaGGACTACGTGGGCCCGAGA +
Preference number: 4 (lower is better)
Translates to: SKNQHLRMRLVISIRHGTPGIGR*DYVGPR
Trigger: TCTCGGGCCCACGTAGTCCCACCTGCCTATGCCTGG...TGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TTCAAGTCCACACTGGTGGTTACAGAAAGTGTACAAACCACATCATCTGACTTGCAGCCCTGGTCGCAGTaGCCATCACTGAAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: FKSTLVVTESVQTTSSDLQPWSQ*PSLKWS
Trigger: GGACCACTTCAGTGATGGCCACTGCGACCAGGGCTG...CAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGACTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TTCAAGTCCACACTGGTGGTTACAGAAAGTGTACAAACCACATCATCTGACTTGGATGTGGGCAGGGCCTaGCTTTCCTGGGGCAGAATG +
Preference number: 4 (lower is better)
Translates to: FKSTLVVTESVQTTSSDLDVGRA*LSWGRM
Trigger: CATTCTGCCCCAGGAAAGCCAGGCCCTGCCCACATC...CAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGACTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp TTCAAGTCCACACTGGTGGTTACAGAAAGTGTACAAACCACATCATCTGACTTGACTGAGGTGTGGCTGTaGTGGTGGCTGCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: FKSTLVVTESVQTTSSDLTEVWL*WWLQVL
Trigger: CAGAACCTGCAGCCACCATCACAGCCACACCTCAGT...CAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGACTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp TTCAAGTCCACACTGGTGGTTACAGAAAGTGTACAAACCACATCATCTGACTTGGGTTGTACATCTGCCTaGCTGGGCTCCCCACTCAAG +
Preference number: 4 (lower is better)
Translates to: FKSTLVVTESVQTTSSDLGCTSA*LGSPLK
Trigger: CTTGAGTGGGGAGCCCAGTCAGGCAGATGTACAACC...CAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGACTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp TTCAAGTCCACACTGGTGGTTACAGAAAGTGTACAAACCACATCATCTGACTTGCTGGATGTTGGCATCTaGACTGGCCTCCAGCAAGCG +
Preference number: 4 (lower is better)
Translates to: FKSTLVVTESVQTTSSDLLDVGI*TGLQQA
Trigger: CGCTTGCTGGAGGCCAGTGCAGATGCCAACATCCAG...CAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGACTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp AGTAAGAATCAACATCTTAGGATGCGTCTGGTCATATCTATTAGGCATGGCACAGAGCCGATCTCATTGTaGCAGGTGCCTCCATGGCGG +
Preference number: 4 (lower is better)
Translates to: SKNQHLRMRLVISIRHGTEPISL*QVPPWR
Trigger: CCGCCATGGAGGCACCTGCCACAATGAGATCGGCTC...TGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp AAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGATACTGCAACCGCTGCCACGTACATaGGGTGCAGCTGCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: KHVFTDTYSATGVYLILQPLPRT*GAAARA
Trigger: TGCCCTCGCAGCTGCACCTCATGTACGTGGCAGCGG...TTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp TTCAAGTCCACACTGGTGGTTACAGAAAGTGTACAAACCACATCATCTGACTTGTGCCTGTGGTCAGTCTaGTCACTCAGGTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: FKSTLVVTESVQTTSSDLCLWSV*SLRSGR
Trigger: TCTCCCTGACCTGAGTGATCAGACTGACCACAGGCA...CAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGACTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp TTCATATTTTACAGACACACAGGGAACTTCACCCTGACCAGGAAAATCAAGGCTAACCCAGGGGACAGCTaGAGGCATAATCCACAGTGC +
Preference number: 4 (lower is better)
Translates to: FIFYRHTGNFTLTRKIKANPGDS*RHNPQC
Trigger: GCACTGTGGATTATGCCTGCAGCTGTCCCCTGGGTT...AGCCTTGATTTTCCTGGTCAGGGTGAAGTTCCCTGTGTGTCTGTAAAATATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp AGTAAGAATCAACATCTTAGGATGCGTCTGGTCATATCTATTAGGCATGGCACACGTTGTGGCAGGGGCTaGCCGCACATTCGTCAATGT +
Preference number: 4 (lower is better)
Translates to: SKNQHLRMRLVISIRHGTRCGRG*PHIRQC
Trigger: ACATTGACGAATGTGCGGGCAGCCCCTGCCACAACG...TGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp TTCAAGTCCACACTGGTGGTTACAGAAAGTGTACAAACCACATCATCTGACTTGCAGCACTGTAGAGACTaGGTGCAGTTCTTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: FKSTLVVTESVQTTSSDLQHCRD*VQFFQG
Trigger: CCCCTGGAAGAACTGCACGCAGTCTCTACAGTGCTG...CAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGACTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TTCAAGTCCACACTGGTGGTTACAGAAAGTGTACAAACCACATCATCTGACTTGCTGTCCAGCAAAACCTaGCAAGCAGGCACACTCGTG +
Preference number: 4 (lower is better)
Translates to: FKSTLVVTESVQTTSSDLLSSKT*QAGTLV
Trigger: CACGAGTGTGCCTGCTTGCCAGGTTTTGCTGGACAG...CAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGACTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TTCATATTTTACAGACACACAGGGAACTTCACCCTGACCAGGAAAATCAAGGCTATGGCCTGTGTAGCCTaGCTGGCACAGGCAGGTAAA +
Preference number: 4 (lower is better)
Translates to: FIFYRHTGNFTLTRKIKAMACVA*LAQAGK
Trigger: TTTACCTGCCTGTGCCAGCCAGGCTACACAGGCCAT...AGCCTTGATTTTCCTGGTCAGGGTGAAGTTCCCTGTGTGTCTGTAAAATATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp AAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGATACTGCAACCGGCCGAGTTGCACTaGCTGTCACAGTGGCCGTCG +
Preference number: 4 (lower is better)
Translates to: KHVFTDTYSATGVYLILQPAELH*LSQWPS
Trigger: CGACGGCCACTGTGACAGCCAGTGCAACTCGGCCGG...TTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp AGTAAGAATCAACATCTTAGGATGCGTCTGGTCATATCTATTAGGCATGGCACAAGGGCCTGGCTTTCCTaGGGCAGAATGGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: SKNQHLRMRLVISIRHGTRAWLS*GRMVCT
Trigger: TGTGCACACCATTCTGCCCCAGGAAAGCCAGGCCCT...TGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp TTCATATTTTACAGACACACAGGGAACTTCACCCTGACCAGGAAAATCAAGGCTAGATGGCTTTGCCGTTaGCAGGGTTGGTGTCACAGT +
Preference number: 4 (lower is better)
Translates to: FIFYRHTGNFTLTRKIKARWLCR*QGWCHS
Trigger: ACTGTGACACCAACCCTGTCAACGGCAAAGCCATCT...AGCCTTGATTTTCCTGGTCAGGGTGAAGTTCCCTGTGTGTCTGTAAAATATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp AAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGATACTGCAACTGGCAGGGGTTAGGTaGGCACTCGTCCACCTCGTC +
Preference number: 4 (lower is better)
Translates to: KHVFTDTYSATGVYLILQLAGVR*ALVHLV
Trigger: GACGAGGTGGACGAGTGCTCACCTAACCCCTGCCAG...TTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp AGTAAGAATCAACATCTTAGGATGCGTCTGGTCATATCTATTAGGCATGGCACACGCAGTGGCCATCACTaGAGTGGTCCTTGCAGTACT +
Preference number: 4 (lower is better)
Translates to: SKNQHLRMRLVISIRHGTRSGHH*SGPCST
Trigger: AGTACTGCAAGGACCACTTCAGTGATGGCCACTGCG...TGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp TTCAAGTCCACACTGGTGGTTACAGAAAGTGTACAAACCACATCATCTGACTTGGGTTGCAGACCTTATTaGCTGCATCCACCTGGCACT +
Preference number: 4 (lower is better)
Translates to: FKSTLVVTESVQTTSSDLGCRPY*LHPPGT
Trigger: AGTGCCAGGTGGATGCAGGCAATAAGGTCTGCAACC...CAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGACTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp AAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGATACTGCAACACGAAGGCGGCCGCTaGCACGTACATGAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: KHVFTDTYSATGVYLILQHEGGR*HVHEVQ
Trigger: CTGCACCTCATGTACGTGGCAGCGGCCGCCTTCGTG...TTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp AGTAAGAATCAACATCTTAGGATGCGTCTGGTCATATCTATTAGGCATGGCACACGCACGATATCGTGGTaGATACGCTCCTGTGCGATG +
Preference number: 4 (lower is better)
Translates to: SKNQHLRMRLVISIRHGTRTISW*IRSCAM
Trigger: CATCGCACAGGAGCGTATGCACCACGATATCGTGCG...TGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CAGCATTTACAAATCATGAATCCTTGTTCATATTTTACAGACACACAGGGAACTCATTGCGGCAGGGGTTaGCCAGGCAGGCGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: QHLQIMNPCSYFTDTQGTHCGRG*PGRRCP
Trigger: TGGACAACGCCTGCCTGGCCAACCCCTGCCGCAATG...AGTTCCCTGTGTGTCTGTAAAATATGAACAAGGATTCATGATTTGTAAATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TTCAAGTCCACACTGGTGGTTACAGAAAGTGTACAAACCACATCATCTGACTTGATCTTGTCCATGCAGTaGCCATTGTGCAGACAGGGG +
Preference number: 4 (lower is better)
Translates to: FKSTLVVTESVQTTSSDLILSMQ*PLCRQG
Trigger: CCCCTGTCTGCACAATGGCCACTGCATGGACAAGAT...CAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGACTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TTCATATTTTACAGACACACAGGGAACTTCACCCTGACCAGGAAAATCAAGGCTGTGTTGTTCTCGCAGTaGATGCCATTGAAGCCCACG +
Preference number: 4 (lower is better)
Translates to: FIFYRHTGNFTLTRKIKAVLFSQ*MPLKPT
Trigger: CGTGGGCTTCAATGGCATCCACTGCGAGAACAACAC...AGCCTTGATTTTCCTGGTCAGGGTGAAGTTCCCTGTGTGTCTGTAAAATATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp AAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGATACTGCAACCACACAGGGGCTGCTaGCTGGGAACTGGCACTCAG +
Preference number: 4 (lower is better)
Translates to: KHVFTDTYSATGVYLILQPHRGC*LGTGTQ
Trigger: CTGAGTGCCAGTTCCCAGCCAGCAGCCCCTGTGTGG...TTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TTCATATTTTACAGACACACAGGGAACTTCACCCTGACCAGGAAAATCAAGGCTACCAATCAGAGATGTTaGAATGCGGGGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: FIFYRHTGNFTLTRKIKATNQRC*NAGRSW
Trigger: CCAGCTCCTCCCCGCATTCCAACATCTCTGATTGGT...AGCCTTGATTTTCCTGGTCAGGGTGAAGTTCCCTGTGTGTCTGTAAAATATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp AAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGATACTGCAAGGTACCAGGAAGCAGTaGAGAGGTGGCCCAACCCAC +
Preference number: 4 (lower is better)
Translates to: KHVFTDTYSATGVYLILQGTRKQ*RGGPTH
Trigger: GTGGGTTGGGCCACCTCTTCACTGCTTCCTGGTACC...TTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp TCCATCTTTAAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGTGGCTGATGCCCAGGTaGGTGTCAGGCATACCAGGC +
Preference number: 4 (lower is better)
Translates to: SIFKHVFTDTYSATGVYLWLMPR*VSGIPG
Trigger: GCCTGGTATGCCTGACACTCACCTGGGCATCAGCCA...CAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTTAAAGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp AGTAAGAATCAACATCTTAGGATGCGTCTGGTCATATCTATTAGGCATGGCACATGTCACTCTCACAGTTaGGACCTGTATAGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: SKNQHLRMRLVISIRHGTCHSHS*DLYSRP
Trigger: AGGCCGGCTATACAGGTCGCAACTGTGAGAGTGACA...TGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CAGCATTTACAAATCATGAATCCTTGTTCATATTTTACAGACACACAGGGAACTGAGTCCTGGCATCGTTaGCCCACAAAGGCTCCGCTG +
Preference number: 4 (lower is better)
Translates to: QHLQIMNPCSYFTDTQGTESWHR*PTKAPL
Trigger: CAGCGGAGCCTTTGTGGGCCAACGATGCCAGGACTC...AGTTCCCTGTGTGTCTGTAAAATATGAACAAGGATTCATGATTTGTAAATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TCCATCTTTAAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGCATTGGCACAGGGGTTaGAGGCACAGGGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: SIFKHVFTDTYSATGVYLHWHRG*RHRGQP
Trigger: AGGCTGACCCCTGTGCCTCCAACCCCTGTGCCAATG...CAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTTAAAGATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TCCATCTTTAAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGCACGCATCGTTGAGGTaGCACAGCAGACCTGTGCGC +
Preference number: 4 (lower is better)
Translates to: SIFKHVFTDTYSATGVYLHASLR*HSRPVR
Trigger: GCGCACAGGTCTGCTGTGCCACCTCAACGATGCGTG...CAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTTAAAGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp AAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGATACTGCAAGCTGGCGCCCACCACTaGTACCAGGAAGCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: KHVFTDTYSATGVYLILQAGAHH*YQEAVK
Trigger: CTTCACTGCTTCCTGGTACCAGTGGTGGGCGCCAGC...TTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp AAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGATACTGCAATGCCCAGGTAGCCATTaGGCGAGCAGAGTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: KHVFTDTYSATGVYLILQCPGSH*ASRVWE
Trigger: CTCCCACACTCTGCTCGCCCAATGGCTACCTGGGCA...TTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp AAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGATACTGCAAGAGGAGCTGGACCACTaGTCAGGGGACTCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: KHVFTDTYSATGVYLILQEELDH*SGDSGD
Trigger: ATCCCCTGAGTCCCCTGACCAGTGGTCCAGCTCCTC...TTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp AAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGATACTGCAACACAGGTGCCATTGTTaGAGCACTTGGGGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: KHVFTDTYSATGVYLILQHRCHC*STWGFG
Trigger: CCCGAAGCCCCAAGTGCTTCAACAATGGCACCTGTG...TTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp TCCATCTTTAAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGACACAGAGCCCTCCATaGTGGCACAGGAGAGTGACG +
Preference number: 4 (lower is better)
Translates to: SIFKHVFTDTYSATGVYLTQSPP*WHRRVT
Trigger: CGTCACTCTCCTGTGCCAGCATGGAGGGCTCTGTGT...CAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTTAAAGATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp AGTAAGAATCAACATCTTAGGATGCGTCTGGTCATATCTATTAGGCATGGCACAGTAAGCTGCCACAAGTaGGGGCATCATTCTCACATG +
Preference number: 4 (lower is better)
Translates to: SKNQHLRMRLVISIRHGTVSCHK*GHHSHM
Trigger: CATGTGAGAATGATGCCCGCACTTGTGGCAGCTTAC...TGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp AGTAAGAATCAACATCTTAGGATGCGTCTGGTCATATCTATTAGGCATGGCACAACTGTAGAGACTGCGTaGAGTTCTTCCAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: SKNQHLRMRLVISIRHGTTVETA*SSSRGH
Trigger: ATGACCCCTGGAAGAACTGCACGCAGTCTCTACAGT...TGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp CAGCATTTACAAATCATGAATCCTTGTTCATATTTTACAGACACACAGGGAACTAAGACCACGTTGGTGTaGAGCACGTGGCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: QHLQIMNPCSYFTDTQGTKTTLV*STWLSS
Trigger: GGAGCTCAGCCACGTGCTGCACACCAACGTGGTCTT...AGTTCCCTGTGTGTCTGTAAAATATGAACAAGGATTCATGATTTGTAAATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp TCCATCTTTAAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGCCAACAGGCAGCCCTTaGCATCCTGGGACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SIFKHVFTDTYSATGVYLPTGSP*HPGTSS
Trigger: GGAAGAAGTCCCAGGATGGCAAGGGCTGCCTGTTGG...CAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTTAAAGATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TCCATCTTTAAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGAGTGGTACTGCGTGTTaGTCTGCCAGCACCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SIFKHVFTDTYSATGVYLSGTAC*SASTCH
Trigger: GTGGCAGGTGCTGGCAGACCAACACGCAGTACCACT...CAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTTAAAGATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp AGTAAGAATCAACATCTTAGGATGCGTCTGGTCATATCTATTAGGCATGGCACACACTGGCTGTCACAGTaGCCGTCGCTAAAATACTTC +
Preference number: 4 (lower is better)
Translates to: SKNQHLRMRLVISIRHGTHWLSQ*PSLKYF
Trigger: GAAGTATTTTAGCGACGGCCACTGTGACAGCCAGTG...TGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp AGTAAGAATCAACATCTTAGGATGCGTCTGGTCATATCTATTAGGCATGGCACACAAACCGGAACTTCTTaGTCTCCAGGTCTTCGTCTC +
Preference number: 4 (lower is better)
Translates to: SKNQHLRMRLVISIRHGTQTGTS*SPGLRL
Trigger: GAGACGAAGACCTGGAGACCAAGAAGTTCCGGTTTG...TGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp AAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGATACTGCAAAGCCGCACGATATCGTaGTGCATACGCTCCTGTGCG +
Preference number: 4 (lower is better)
Translates to: KHVFTDTYSATGVYLILQSRTIS*CIRSCA
Trigger: CGCACAGGAGCGTATGCACCACGATATCGTGCGGCT...TTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TCCATCTTTAAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGCCCATCATGCTATGCTaGAGGCCAGCTGCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SIFKHVFTDTYSATGVYLPIMLC*RPAACV
Trigger: CACACAGGCAGCTGGCCTCCAGCATAGCATGATGGG...CAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTTAAAGATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TCCATCTTTAAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGGGTAGTGGTCATGGGTaGGACCATGGAGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: SIFKHVFTDTYSATGVYLGSGHG*DHGGWQ
Trigger: CTGCCATCCTCCATGGTCCCACCCATGACCACTACC...CAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTTAAAGATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR CAA 72 bp GTATTTACAGATACTTATTCTGCCACAGGCGTATACTaGATACTGCAAGAATCTGCTGTGAGCACAGCCCTG +
Preference number: 4 (lower is better)
Translates to: VFTDTYSATGVY*ILQESAVSTAL
Trigger: CAGGGCTGTGCTCACAGCAGATTCTTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp AAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGATACTGCAATCATACTGGCACAGGTaGCCGTTGAAGCCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: KHVFTDTYSATGVYLILQSYWHR*PLKPLG
Trigger: CCCCAAAGGCTTCAACGGGCACCTGTGCCAGTATGA...TTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp TCCATCTTTAAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGATGTGGGCTCACAGGTaGCCTGATTGTAGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: SIFKHVFTDTYSATGVYLMWAHR*PDCSRG
Trigger: ACCCCTGCTACAATCAGGGCACCTGTGAGCCCACAT...CAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTTAAAGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp AGTAAGAATCAACATCTTAGGATGCGTCTGGTCATATCTATTAGGCATGGCACAGGCATACATATGCATTaGAACTCCCCAATCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SKNQHLRMRLVISIRHGTGIHMH*NSPIWS
Trigger: GGACCAGATTGGGGAGTTCCAATGCATATGTATGCC...TGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TCCATCTTTAAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGGGCACCGTTCTTGCATaGTGTGCTGGCACACTCATC +
Preference number: 4 (lower is better)
Translates to: SIFKHVFTDTYSATGVYLGTVLA*CAGTLI
Trigger: GATGAGTGTGCCAGCACACCATGCAAGAACGGTGCC...CAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTTAAAGATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp AAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGATACTGCAACATCATTCTCACATGTaGCACCCTCGAAGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: KHVFTDTYSATGVYLILQHHSHM*HPRSPQ
Trigger: CTGCGGGCTTCGAGGGTGCCACATGTGAGAATGATG...TTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CAGCATTTACAAATCATGAATCCTTGTTCATATTTTACAGACACACAGGGAACTAAGGGTTCTCGGATGTaGGCTCACAGGTGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: QHLQIMNPCSYFTDTQGTKGSRM*AHRCPD
Trigger: ATCAGGGCACCTGTGAGCCCACATCCGAGAACCCTT...AGTTCCCTGTGTGTCTGTAAAATATGAACAAGGATTCATGATTTGTAAATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CAGCATTTACAAATCATGAATCCTTGTTCATATTTTACAGACACACAGGGAACTGGGAAGATCATCTGCTaGCCTTGCGCATCACGCTTG +
Preference number: 4 (lower is better)
Translates to: QHLQIMNPCSYFTDTQGTGKIIC*PCASRL
Trigger: CAAGCGTGATGCGCAAGGCCAGCAGATGATCTTCCC...AGTTCCCTGTGTGTCTGTAAAATATGAACAAGGATTCATGATTTGTAAATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TCCATCTTTAAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGTGTTGGCATCTGCACTaGCCTCCAGCAAGCGCTTTG +
Preference number: 4 (lower is better)
Translates to: SIFKHVFTDTYSATGVYLCWHLH*PPASAL
Trigger: CAAAGCGCTTGCTGGAGGCCAGTGCAGATGCCAACA...CAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTTAAAGATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TCCATCTTTAAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGTACTCAGCACTGTGCTaGCACTGGAGGCTACAGGCA +
Preference number: 4 (lower is better)
Translates to: SIFKHVFTDTYSATGVYLYSALC*HWRLQA
Trigger: TGCCTGTAGCCTCCAGTGCCAGCACAGTGCTGAGTA...CAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTTAAAGATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp CAGCATTTACAAATCATGAATCCTTGTTCATATTTTACAGACACACAGGGAACTCACAGGTACCACCATTaGAGCAGGAGCTCTCAGTAC +
Preference number: 4 (lower is better)
Translates to: QHLQIMNPCSYFTDTQGTHRYHH*SRSSQY
Trigger: GTACTGAGAGCTCCTGCTTCAATGGTGGTACCTGTG...AGTTCCCTGTGTGTCTGTAAAATATGAACAAGGATTCATGATTTGTAAATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp AAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGATACTGCAACTTCTTGCTGGCCTCTaGCACTTTGAAACCCTCAGG +
Preference number: 4 (lower is better)
Translates to: KHVFTDTYSATGVYLILQLLAGL*HFETLR
Trigger: CCTGAGGGTTTCAAAGTGTCAGAGGCCAGCAAGAAG...TTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CAGCATTTACAAATCATGAATCCTTGTTCATATTTTACAGACACACAGGGAACTTGGAACTCCCCAATCTaGTCCAGGCAAGTGGCATCA +
Preference number: 4 (lower is better)
Translates to: QHLQIMNPCSYFTDTQGTWNSPI*SRQVAS
Trigger: TGATGCCACTTGCCTGGACCAGATTGGGGAGTTCCA...AGTTCCCTGTGTGTCTGTAAAATATGAACAAGGATTCATGATTTGTAAATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp AAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGATACTGCAATGGTCCTTGCAGTACTaGTCATACAGGGGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: KHVFTDTYSATGVYLILQWSLQY*SYRGLH
Trigger: GTGCAACCCCCTGTATGACCAGTACTGCAAGGACCA...TTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TCCATCTTTAAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGAGCTCCCGCAGAAAGTaGAAGGAGTTGTTCCGTAGC +
Preference number: 4 (lower is better)
Translates to: SIFKHVFTDTYSATGVYLSSRRK*KELFRS
Trigger: GCTACGGAACAACTCCTTCCACTTTCTGCGGGAGCT...CAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTTAAAGATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp CAGCATTTACAAATCATGAATCCTTGTTCATATTTTACAGACACACAGGGAACTTGGAGAGACATTCATTaGCATCACCCTCACACCGCT +
Preference number: 4 (lower is better)
Translates to: QHLQIMNPCSYFTDTQGTWRDIH*HHPHTA
Trigger: AGCGGTGTGAGGGTGATGTCAATGAATGTCTCTCCA...AGTTCCCTGTGTGTCTGTAAAATATGAACAAGGATTCATGATTTGTAAATGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp CAGCATTTACAAATCATGAATCCTTGTTCATATTTTACAGACACACAGGGAACTAGGCACCCCCATTCTTaGAGTTGTTTCCTGGACAGT +
Preference number: 4 (lower is better)
Translates to: QHLQIMNPCSYFTDTQGTRHPHS*SCFLDS
Trigger: ACTGTCCAGGAAACAACTGCAAGAATGGGGGTGCCT...AGTTCCCTGTGTGTCTGTAAAATATGAACAAGGATTCATGATTTGTAAATGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp CAGCATTTACAAATCATGAATCCTTGTTCATATTTTACAGACACACAGGGAACTGGATCAGTGGAGTTGTaGCATCATGCATTCGGGCAT +
Preference number: 4 (lower is better)
Translates to: QHLQIMNPCSYFTDTQGTGSVEL*HHAFGH
Trigger: ATGCCCGAATGCATGATGGCACAACTCCACTGATCC...AGTTCCCTGTGTGTCTGTAAAATATGAACAAGGATTCATGATTTGTAAATGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp CAGCATTTACAAATCATGAATCCTTGTTCATATTTTACAGACACACAGGGAACTTCCTCCTTGTTGTTCTaGATGTCCTTGTTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: QHLQIMNPCSYFTDTQGTSSLLF*MSLLAP
Trigger: CGGAGCCAACAAGGACATGCAGAACAACAAGGAGGA...AGTTCCCTGTGTGTCTGTAAAATATGAACAAGGATTCATGATTTGTAAATGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp CAGCATTTACAAATCATGAATCCTTGTTCATATTTTACAGACACACAGGGAACTCACAGCCCAGGGTTCTaGCTGCACTCATTAACATCT +
Preference number: 4 (lower is better)
Translates to: QHLQIMNPCSYFTDTQGTHSPGF*LHSLTS
Trigger: AGATGTTAATGAGTGCAGCCAGAACCCTGGGCTGTG...AGTTCCCTGTGTGTCTGTAAAATATGAACAAGGATTCATGATTTGTAAATGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp CAGCATTTACAAATCATGAATCCTTGTTCATATTTTACAGACACACAGGGAACTGACATTGGAACTCATTaGTCTTGTCCATGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: QHLQIMNPCSYFTDTQGTDIGTH*SCPCSG
Trigger: GCCACTGCATGGACAAGATCAATGAGTTCCAATGTC...AGTTCCCTGTGTGTCTGTAAAATATGAACAAGGATTCATGATTTGTAAATGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp TCCATCTTTAAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGAAGCCTTTGGGGCACTaGCATTGGAACTCATTGATC +
Preference number: 4 (lower is better)
Translates to: SIFKHVFTDTYSATGVYLKPLGH*HWNSLI
Trigger: GATCAATGAGTTCCAATGTCAGTGCCCCAAAGGCTT...CAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTTAAAGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR TCA 90 bp TCCATCTTTAAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGCACACTCGTTGTTGTTaGTGTCACAGTTTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: SIFKHVFTDTYSATGVYLHTRCC*CHSLFH
Trigger: GTGGAACAAACTGTGACATCAACAACAACGAGTGTG...CAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTTAAAGATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR GCA 90 bp AAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGATACTGCAAAACCTGGCATACATATaGATTGGAACTCCCCAATCT +
Preference number: 4 (lower is better)
Translates to: KHVFTDTYSATGVYLILQNLAYI*IGTPQS
Trigger: AGATTGGGGAGTTCCAATGCATATGTATGCCAGGTT...TTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CCA 90 bp TCCATCTTTAAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGTACACCTTCATAACCTaGCATACATATGCATTGGAA +
Preference number: 4 (lower is better)
Translates to: SIFKHVFTDTYSATGVYLYTFIT*HTYALE
Trigger: TTCCAATGCATATGTATGCCAGGTTATGAAGGTGTA...CAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTTAAAGATGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
3UTR CAA 72 bp GTGGTTACAGAAAGTGTACAAACCACATCATCTGACTaGTTTCCTGTTTTAGATACAAAACTAATCCATGAA +
Preference number: 4 (lower is better)
Translates to: VVTESVQTTSSD*FPVLDTKLIHE
Trigger: TTCATGGATTAGTTTTGTATCTAAAACAGGAAACAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp AACAGGAGCACGAAGGCGGCCGCTGCCACGTACATGAGGTGCAGCTaGGAGGGCAGCGGAGGCTCCACCGGCTCACTCTTCACGGCCTCA +
Preference number: 5 (lower is better)
Translates to: NRSTKAAAATYMRCS*EGSGGSTGSLFTAS
Trigger: TGAGGCCGTGAAGAGTGAGCCGGTGGAGCCTCCGCTGCCCTCGCAGCTGCACCTCATGTACGTGGCAGCGGCCGCCTTCGTGCTCCTGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp CCATGCAGTCAGCATCCACCTCCCCCTGAGGCGGTGTTGGGGCCATaGCAGACATGCGCAGGTCAGCAGCGTCCAGGTGCTGCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: PCSQHPPPPEAVLGP*QTCAGQQRPGAAGS
Trigger: GGACCCAGCAGCACCTGGACGCTGCTGACCTGCGCATGTCTGCCATGGCCCCAACACCGCCTCAGGGGGAGGTGGATGCTGACTGCATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 90 bp TACCCACACAGGGGCTGCTGGCTGGGAACTGGCACTCAGGGCCGGTaGAGGATCCCAGGCATAGGCAGGTGGGACTACGTGGGCCCGAGA +
Preference number: 5 (lower is better)
Translates to: YPHRGCWLGTGTQGR*RIPGIGRWDYVGPR
Trigger: TCTCGGGCCCACGTAGTCCCACCTGCCTATGCCTGGGATCCTTCACCGGCCCTGAGTGCCAGTTCCCAGCCAGCAGCCCCTGTGTGGGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp TGTTCCGTAGCTGGTCGGGTGGAAGCAGCACCACCAGCACCAGGGTaGCGGCTGCCAGCCGCTCGGGTACATGCTCAGCACAGTCTAGGC +
Preference number: 5 (lower is better)
Translates to: CSVAGRVEAAPPAPG*RLPAARVHAQHSLG
Trigger: GCCTAGACTGTGCTGAGCATGTACCCGAGCGGCTGGCAGCCGGCACCCTGGTGCTGGTGGTGCTGCTTCCACCCGACCAGCTACGGAACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp CTGGCCTCTGACACTTTGAAACCCTCAGGGAACCAGAGCTGGCCATaGTGCCGCCGGCGCTTGCGGGACAGCAGCACCCCACAGCCCACA +
Preference number: 5 (lower is better)
Translates to: LASDTLKPSGNQSWP*CRRRLRDSSTPQPT
Trigger: TGTGGGCTGTGGGGTGCTGCTGTCCCGCAAGCGCCGGCGGCAGCATGGCCAGCTCTGGTTCCCTGAGGGTTTCAAAGTGTCAGAGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp CCAGGTAGCCATTGGGCGAGCAGAGTGTGGGAGACAGAGTGGGTGTaGCACCCAGGGCAGTGCCATGCAGCTGTGGGCTGCGCACCAGGT +
Preference number: 5 (lower is better)
Translates to: PGSHWASRVWETEWV*HPGQCHAAVGCAPG
Trigger: ACCTGGTGCGCAGCCCACAGCTGCATGGCACTGCCCTGGGTGGCACACCCACTCTGTCTCCCACACTCTGCTCGCCCAATGGCTACCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp GCCCCATCATGCTATGCTGGAGGCCAGCTGCCTGTGTGCTCAGTGTaGCCGGCGTCACACCCGGCCGTAGTGGGTTGTACTGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: APSCYAGGQLPVCSV*PASHPAVVGCTGWA
Trigger: TGCCCAGCCAGTACAACCCACTACGGCCGGGTGTGACGCCGGGCACACTGAGCACACAGGCAGCTGGCCTCCAGCATAGCATGATGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp TCAGTGTGCCCGGCGTCACACCCGGCCGTAGTGGGTTGTACTGGCTaGGCACCATGCCATTCTGGAGCCGGGGAAGCCACTCACACTGGC +
Preference number: 5 (lower is better)
Translates to: SVCPASHPAVVGCTG*APCHSGAGEATHTG
Trigger: GCCAGTGTGAGTGGCTTCCCCGGCTCCAGAATGGCATGGTGCCCAGCCAGTACAACCCACTACGGCCGGGTGTGACGCCGGGCACACTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp GTGCTCAGTGTGCCCGGCGTCACACCCGGCCGTAGTGGGTTGTACTaGCTGGGCACCATGCCATTCTGGAGCCGGGGAAGCCACTCACAC +
Preference number: 5 (lower is better)
Translates to: VLSVPGVTPGRSGLY*LGTMPFWSRGSHSH
Trigger: GTGTGAGTGGCTTCCCCGGCTCCAGAATGGCATGGTGCCCAGCCAGTACAACCCACTACGGCCGGGTGTGACGCCGGGCACACTGAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp GCACAGGCAGACTGCTGGGGCCCAGCGGTTGTACATCTGCCTGACTaGGCTCCCCACTCAAGAAGCTCCGGCCCAGGTGCCCATTGGCTG +
Preference number: 5 (lower is better)
Translates to: AQADCWGPAVVHLPD*APHSRSSGPGAHWL
Trigger: CAGCCAATGGGCACCTGGGCCGGAGCTTCTTGAGTGGGGAGCCCAGTCAGGCAGATGTACAACCGCTGGGCCCCAGCAGTCTGCCTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp GGGACCATGGAGGATGGCAGTGATGTGGGCAGGGCCTGGCTTTCCTaGGGCAGAATGGTGTGCACAGGCAGACTGCTGGGGCCCAGCGGT +
Preference number: 5 (lower is better)
Translates to: GTMEDGSDVGRAWLS*GRMVCTGRLLGPSG
Trigger: ACCGCTGGGCCCCAGCAGTCTGCCTGTGCACACCATTCTGCCCCAGGAAAGCCAGGCCCTGCCCACATCACTGCCATCCTCCATGGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp CTTTGGCAGTCAGGTGTTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCGTGCGGTCTGTCTGGTaGTGCAAGCTGGCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: LWQSGVRSPGPGRDSPSVVRSVW*CKLAPW
Trigger: CCAGGGCGCCAGCTTGCACAACCAGACAGACCGCAC...GACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAACACCTGACTGCCAAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 90 bp CGCCGAGGGGCTCTCTCCGCTTCTTCTTGCTGGCCTCTGACACTTTaGAACCCTCAGGGAACCAGAGCTGGCCATGCTGCCGCCGGCGCT +
Preference number: 5 (lower is better)
Translates to: RRGALSASSCWPLTL*NPQGTRAGHAAAGA
Trigger: AGCGCCGGCGGCAGCATGGCCAGCTCTGGTTCCCTGAGGGTTTCAAAGTGTCAGAGGCCAGCAAGAAGAAGCGGAGAGAGCCCCTCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 90 bp GTGTGCACAGGCAGACTGCTGGGGCCCAGCGGTTGTACATCTGCCTaGCTGGGCTCCCCACTCAAGAAGCTCCGGCCCAGGTGCCCATTG +
Preference number: 5 (lower is better)
Translates to: VCTGRLLGPSGCTSA*LGSPLKKLRPRCPL
Trigger: CAATGGGCACCTGGGCCGGAGCTTCTTGAGTGGGGAGCCCAGTCAGGCAGATGTACAACCGCTGGGCCCCAGCAGTCTGCCTGTGCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp CCAGTCCAGCCGCTGCGGCACTCACAGTGGTACTGCGTGTTGGTCTaGCAGCACCTGCCACCATTCTTGCAGGGAGCCGAGTCGCACCAG +
Preference number: 5 (lower is better)
Translates to: PVQPLRHSQWYCVLV*QHLPPFLQGAESHQ
Trigger: CTGGTGCGACTCGGCTCCCTGCAAGAATGGTGGCAGGTGCTGGCAGACCAACACGCAGTACCACTGTGAGTGCCGCAGCGGCTGGACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp ACAAAGAACAGGAGCACGAAGGCGGCCGCTGCCACGTACATGAGGTaGAGCTGCGAGGGCAGCGGAGGCTCCACCGGCTCACTCTTCACG +
Preference number: 5 (lower is better)
Translates to: TKNRSTKAAAATYMR*SCEGSGGSTGSLFT
Trigger: CGTGAAGAGTGAGCCGGTGGAGCCTCCGCTGCCCTCGCAGCTGCACCTCATGTACGTGGCAGCGGCCGCCTTCGTGCTCCTGTTCTTTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp GCCTCTGACACTTTGAAACCCTCAGGGAACCAGAGCTGGCCATGCTaGCGCCGGCGCTTGCGGGACAGCAGCACCCCACAGCCCACAAAG +
Preference number: 5 (lower is better)
Translates to: ASDTLKPSGNQSWPC*RRRLRDSSTPQPTK
Trigger: CTTTGTGGGCTGTGGGGTGCTGCTGTCCCGCAAGCGCCGGCGGCAGCATGGCCAGCTCTGGTTCCCTGAGGGTTTCAAAGTGTCAGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp AATGGTGTGCACAGGCAGACTGCTGGGGCCCAGCGGTTGTACATCTaGCTGACTGGGCTCCCCACTCAAGAAGCTCCGGCCCAGGTGCCC +
Preference number: 5 (lower is better)
Translates to: NGVHRQTAGAQRLYI*LTGLPTQEAPAQVP
Trigger: GGGCACCTGGGCCGGAGCTTCTTGAGTGGGGAGCCCAGTCAGGCAGATGTACAACCGCTGGGCCCCAGCAGTCTGCCTGTGCACACCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp ACGTGGCTGAGCTCCCGCAGAAAGTGGAAGGAGTTGTTCCGTAGCTaGTCGGGTGGAAGCAGCACCACCAGCACCAGGGTGCCGGCTGCC +
Preference number: 5 (lower is better)
Translates to: TWLSSRRKWKELFRS*SGGSSTTSTRVPAA
Trigger: GGCAGCCGGCACCCTGGTGCTGGTGGTGCTGCTTCCACCCGACCAGCTACGGAACAACTCCTTCCACTTTCTGCGGGAGCTCAGCCACGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp GATTGCCCAGGTAGCCATTGGGCGAGCAGAGTGTGGGAGACAGAGTaGGTGTGCCACCCAGGGCAGTGCCATGCAGCTGTGGGCTGCGCA +
Preference number: 5 (lower is better)
Translates to: DCPGSHWASRVWETE*VCHPGQCHAAVGCA
Trigger: TGCGCAGCCCACAGCTGCATGGCACTGCCCTGGGTGGCACACCCACTCTGTCTCCCACACTCTGCTCGCCCAATGGCTACCTGGGCAATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp GGGCCTGGCTTTCCTGGGGCAGAATGGTGTGCACAGGCAGACTGCTaGGGCCCAGCGGTTGTACATCTGCCTGACTGGGCTCCCCACTCA +
Preference number: 5 (lower is better)
Translates to: GPGFPGAEWCAQADC*GPAVVHLPDWAPHS
Trigger: TGAGTGGGGAGCCCAGTCAGGCAGATGTACAACCGCTGGGCCCCAGCAGTCTGCCTGTGCACACCATTCTGCCCCAGGAAAGCCAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp CCTGAACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCCATTGGCACAGGGGTaGGAGGCACAGGGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: PEPGGVAQKQAPPTFQHTPLAQG*EAQGSA
Trigger: GGCTGACCCCTGTGCCTCCAACCCCTGTGCCAATGG...AGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGTTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp CTTTGGCAGTCAGGTGTTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCAATCCACGGGCGGTGTaGGAGGCCACGGCACAGACA +
Preference number: 5 (lower is better)
Translates to: LWQSGVRSPGPGRDSPSVNPRAV*EATAQT
Trigger: TGTCTGTGCCGTGGCCTCCAACACCGCCCGTGGATT...GACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAACACCTGACTGCCAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGACCCCCTGAGGCGGTGTaGGGGCCATGGCAGACATGC +
Preference number: 5 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGPPEAV*GPWQTC
Trigger: GCATGTCTGCCATGGCCCCAACACCGCCTCAGGGGG...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp GGCATCGTTGGCCCACAAAGGCTCCGCTGCAGACACAGGCTTCAGTaGCGTTGGCCACTTCGCACCTCCCTCCATTCAGGCAGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: GIVGPQRLRCRHRLQ*RWPLRTSLHSGRSH
Trigger: GTGGGACCTGCCTGAATGGAGGGAGGTGCGAAGTGGCCAACGGCACTGAAGCCTGTGTCTGCAGCGGAGCCTTTGTGGGCCAACGATGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp CGCTGCGGCACTCACAGTGGTACTGCGTGTTGGTCTGCCAGCACCTaGCACCATTCTTGCAGGGAGCCGAGTCGCACCAGCGCACAAGGT +
Preference number: 5 (lower is better)
Translates to: RCGTHSGTACWSAST*HHSCREPSRTSAQG
Trigger: ACCTTGTGCGCTGGTGCGACTCGGCTCCCTGCAAGAATGGTGGCAGGTGCTGGCAGACCAACACGCAGTACCACTGTGAGTGCCGCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp GGTTCTCGGATGTGGGCTCACAGGTGCCCTGATTGTAGCAGGGGTTaGTACCCACACAGGGGCTGCTGGCTGGGAACTGGCACTCAGGGC +
Preference number: 5 (lower is better)
Translates to: GSRMWAHRCPDCSRG*YPHRGCWLGTGTQG
Trigger: GCCCTGAGTGCCAGTTCCCAGCCAGCAGCCCCTGTGTGGGTAGCAACCCCTGCTACAATCAGGGCACCTGTGAGCCCACATCCGAGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp ATCCACCTGGCACTCAGGCAGCTCACAGGCCTCCTCAATCTGCGGTaGGGGAATGTCGCGCCCAGCGCCACCTGTGAAGCTGTAGTCCAG +
Preference number: 5 (lower is better)
Translates to: IHLALRQLTGLLNLR*GNVAPSATCEAVVQ
Trigger: CTGGACTACAGCTTCACAGGTGGCGCTGGGCGCGACATTCCCCCACCGCAGATTGAGGAGGCCTGTGAGCTGCCTGAGTGCCAGGTGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp TTCTTGCTGGCCTCTGACACTTTGAAACCCTCAGGGAACCAGAGCTaGCCATGCTGCCGCCGGCGCTTGCGGGACAGCAGCACCCCACAG +
Preference number: 5 (lower is better)
Translates to: FLLASDTLKPSGNQS*PCCRRRLRDSSTPQ
Trigger: CTGTGGGGTGCTGCTGTCCCGCAAGCGCCGGCGGCAGCATGGCCAGCTCTGGTTCCCTGAGGGTTTCAAAGTGTCAGAGGCCAGCAAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp GTCATGGGTGGGACCATGGAGGATGGCAGTGATGTGGGCAGGGCCTaGCTTTCCTGGGGCAGAATGGTGTGCACAGGCAGACTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: VMGGTMEDGSDVGRA*LSWGRMVCTGRLLG
Trigger: CCCCAGCAGTCTGCCTGTGCACACCATTCTGCCCCAGGAAAGCCAGGCCCTGCCCACATCACTGCCATCCTCCATGGTCCCACCCATGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGTTGGCCAGGCAGGCGTaGTCCAGAGGTGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRLARQA*SRGVRQ
Trigger: CTGCCTGACACCTCTGGACAACGCCTGCCTGGCCAA...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGACCCGGCCGTAGTGGGTaGTACTGGCTGGGCACCATG +
Preference number: 5 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGPGRSG*YWLGTM
Trigger: CATGGTGCCCAGCCAGTACAACCCACTACGGCCGGG...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 90 bp GTCCAGCTCCCTGCGCTGGCGCCCACCACTGGTACCAGGAAGCAGTaGAGAGGTGGCCCAACCCACTGTAGAGCGCTTGATTGGGTGCTT +
Preference number: 5 (lower is better)
Translates to: VQLPALAPTTGTRKQ*RGGPTHCRALDWVL
Trigger: AAGCACCCAATCAAGCGCTCTACAGTGGGTTGGGCCACCTCTTCACTGCTTCCTGGTACCAGTGGTGGGCGCCAGCGCAGGGAGCTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 90 bp TCAAGAAGCTCCGGCCCAGGTGCCCATTGGCTGCCGAGCTCACACTaGGGTGTGGCTGTGATGGTGGCTGCAGGTTCTGAGGCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: SRSSGPGAHWLPSSH*GVAVMVAAGSEAGA
Trigger: AGCTCCAGCCTCAGAACCTGCAGCCACCATCACAGCCACACCTCAGTGTGAGCTCGGCAGCCAATGGGCACCTGGGCCGGAGCTTCTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp GGCAAGGATTGGAGTCCTGGCATCGTTGGCCCACAAAGGCTCCGCTaGAGACACAGGCTTCAGTGCCGTTGGCCACTTCGCACCTCCCTC +
Preference number: 5 (lower is better)
Translates to: GKDWSPGIVGPQRLR*RHRLQCRWPLRTSL
Trigger: GAGGGAGGTGCGAAGTGGCCAACGGCACTGAAGCCTGTGTCTGCAGCGGAGCCTTTGTGGGCCAACGATGCCAGGACTCCAATCCTTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp CACAGTTGCGACCTGTATAGCCGGCCTGGCAGAGGCAGCGGTAGCTaGCATTGGTGTTCTGGCAGGAGGCCCCATGGCGACATGGGCTTT +
Preference number: 5 (lower is better)
Translates to: HSCDLYSRPGRGSGS*HWCSGRRPHGDMGF
Trigger: AAAGCCCATGTCGCCATGGGGCCTCCTGCCAGAACACCAATGGCAGCTACCGCTGCCTCTGCCAGGCCGGCTATACAGGTCGCAACTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp AGCACCACCAGCACCAGGGTGCCGGCTGCCAGCCGCTCGGGTACATaGTCAGCACAGTCTAGGCCATCCCACTCACATTCGGCACTGTTA +
Preference number: 5 (lower is better)
Translates to: STTSTRVPAASRSGT*SAQSRPSHSHSALL
Trigger: TAACAGTGCCGAATGTGAGTGGGATGGCCTAGACTGTGCTGAGCATGTACCCGAGCGGCTGGCAGCCGGCACCCTGGTGCTGGTGGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp GGGACAAGGTATTGGTGGAGAGGCTGCTGTGTAGTGGCCCCATCATaGTATGCTGGAGGCCAGCTGCCTGTGTGCTCAGTGTGCCCGGCG +
Preference number: 5 (lower is better)
Translates to: GTRYWWRGCCVVAPS*YAGGQLPVCSVCPA
Trigger: CGCCGGGCACACTGAGCACACAGGCAGCTGGCCTCCAGCATAGCATGATGGGGCCACTACACAGCAGCCTCTCCACCAATACCTTGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp GTTGGCCCACAAAGGCTCCGCTGCAGACACAGGCTTCAGTGCCGTTaGCCACTTCGCACCTCCCTCCATTCAGGCAGGTCCCACTTGGCT +
Preference number: 5 (lower is better)
Translates to: VGPQRLRCRHRLQCR*PLRTSLHSGRSHLA
Trigger: AGCCAAGTGGGACCTGCCTGAATGGAGGGAGGTGCGAAGTGGCCAACGGCACTGAAGCCTGTGTCTGCAGCGGAGCCTTTGTGGGCCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp GGCTGCAGGGCACATAGGGCAGTTCACAGTGGGGACCAGTATGGGTaGCACGGCAGGCACAGCGATAGGAGCCGATCTCATTGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: GCRAHRAVHSGDQYG*HGRHSDRSRSHCGR
Trigger: CCTGCCACAATGAGATCGGCTCCTATCGCTGTGCCTGCCGTGCCACCCATACTGGTCCCCACTGTGAACTGCCCTATGTGCCCTGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp ACTGACTCACAGCGGCGTCCAGTGTGGCCAGCCCGGCACTCGCAGTaGAAGTCATTAACACGCTGCACACAGTTCTGGGTGCCACGTGGG +
Preference number: 5 (lower is better)
Translates to: TDSQRRPVWPARHSQ*KSLTRCTQFWVPRG
Trigger: CCCACGTGGCACCCAGAACTGTGTGCAGCGTGTTAATGACTTCCACTGCGAGTGCCGGGCTGGCCACACTGGACGCCGCTGTGAGTCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp GTATTGGTGGAGAGGCTGCTGTGTAGTGGCCCCATCATGCTATGCTaGAGGCCAGCTGCCTGTGTGCTCAGTGTGCCCGGCGTCACACCC +
Preference number: 5 (lower is better)
Translates to: VLVERLLCSGPIMLC*RPAACVLSVPGVTP
Trigger: GGGTGTGACGCCGGGCACACTGAGCACACAGGCAGCTGGCCTCCAGCATAGCATGATGGGGCCACTACACAGCAGCCTCTCCACCAATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp AGGATGGCAGTGATGTGGGCAGGGCCTGGCTTTCCTGGGGCAGAATaGTGTGCACAGGCAGACTGCTGGGGCCCAGCGGTTGTACATCTG +
Preference number: 5 (lower is better)
Translates to: RMAVMWAGPGFPGAE*CAQADCWGPAVVHL
Trigger: CAGATGTACAACCGCTGGGCCCCAGCAGTCTGCCTGTGCACACCATTCTGCCCCAGGAAAGCCAGGCCCTGCCCACATCACTGCCATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGGGTGGGCAGCGGCACTaGTACTCTGTGAGAGTGAGC +
Preference number: 5 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRGGQRH*YSVRVS
Trigger: GCTCACTCTCACAGAGTACAAGTGCCGCTGCCCACC...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp CTTTGGCAGTCAGGTGTTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCCACTGGTCATGTCCTaGCAGGTGCCACCGTTGACA +
Preference number: 5 (lower is better)
Translates to: LWQSGVRSPGPGRDSPSVPLVMS*QVPPLT
Trigger: TGTCAACGGTGGCACCTGCAAGGACATGACCAGTGG...GACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAACACCTGACTGCCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp CCTGAACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTACAGCAGCATCCACATaGTTCACCGCGGCCGCCCAA +
Preference number: 5 (lower is better)
Translates to: PEPGGVAQKQAPPTFQHTTAAST*FTAAAQ
Trigger: TTGGGCGGCCGCGGTGAACAATGTGGATGCTGCTGT...AGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCATGGTGGCTGGGGGTGTaGTCCACAGGGGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGAWWLGV*STGEEE
Trigger: CTCCTCCTCCCCTGTGGACAACACCCCCAGCCACCA...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 90 bp GCCGAGCTCACACTGAGGTGTGGCTGTGATGGTGGCTGCAGGTTCTaGGGCTGGAGCTGTAAGTTCTGTGGCTGCACCTGCTGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: AELTLRCGCDGGCRF*GWSCKFCGCTCWVC
Trigger: GCAGACCCAGCAGGTGCAGCCACAGAACTTACAGCTCCAGCCTCAGAACCTGCAGCCACCATCACAGCCACACCTCAGTGTGAGCTCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp CCAGTGTGGCCAGCCCGGCACTCGCAGTGGAAGTCATTAACACGCTaGACACAGTTCTGGGTGCCACGTGGGTCACAGGGGTTGGAGAGA +
Preference number: 5 (lower is better)
Translates to: PVWPARHSQWKSLTR*TQFWVPRGSQGLER
Trigger: TCTCTCCAACCCCTGTGACCCACGTGGCACCCAGAACTGTGTGCAGCGTGTTAATGACTTCCACTGCGAGTGCCGGGCTGGCCACACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGGTGCTGAGGCAAGGATaGGAGTCCTGGCATCGTTGG +
Preference number: 5 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRVLRQG*ESWHRW
Trigger: CCAACGATGCCAGGACTCCAATCCTTGCCTCAGCAC...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp CCTGAACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAGGTGCAGATGGCTTaGCCGTTGACAGGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: PEPGGVAQKQAPPTFQHTQVQMA*PLTGLV
Trigger: CACCAACCCTGTCAACGGCAAAGCCATCTGCACCTG...AGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGCAGGGGTCATTGAAGTaGAGGGAGCAGTCGCCACCA +
Preference number: 5 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRQGSLK*REQSPP
Trigger: TGGTGGCGACTGCTCCCTCAACTTCAATGACCCCTG...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp CCTGAACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCCTTGCGCATCACGCTaGAAGACCACGTTGGTGTGC +
Preference number: 5 (lower is better)
Translates to: PEPGGVAQKQAPPTFQHTPCASR*KTTLVC
Trigger: GCACACCAACGTGGTCTTCAAGCGTGATGCGCAAGG...AGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 90 bp CTTTGGTGCTGGGCTTGCGGGCCTTCTTGCCCTGTGTGGCAGACTTaGGATTGCCCAGGTAGCCATTGGGCGAGCAGAGTGTGGGAGACA +
Preference number: 5 (lower is better)
Translates to: LWCWACGPSCPVWQT*DCPGSHWASRVWET
Trigger: TGTCTCCCACACTCTGCTCGCCCAATGGCTACCTGGGCAATCTCAAGTCTGCCACACAGGGCAAGAAGGCCCGCAAGCCCAGCACCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp ACAGAGTGGGTGTGCCACCCAGGGCAGTGCCATGCAGCTGTGGGCTaGGCACCAGGTTGTACTCATCCAAAAGCCGCACGATATCGTGGT +
Preference number: 5 (lower is better)
Translates to: TEWVCHPGQCHAAVG*APGCTHPKAARYRG
Trigger: ACCACGATATCGTGCGGCTTTTGGATGAGTACAACCTGGTGCGCAGCCCACAGCTGCATGGCACTGCCCTGGGTGGCACACCCACTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp ACAAGTAGCCATGGGGTGACTCGAGGGAGTCCACAGGCGACAGCATaGTCGAGCTGTCCAACAGGCAGCCCTTGCCATCCTGGGACTTCT +
Preference number: 5 (lower is better)
Translates to: TSSHGVTRGSPQATA*SSCPTGSPCHPGTS
Trigger: AGAAGTCCCAGGATGGCAAGGGCTGCCTGTTGGACAGCTCGAGCATGCTGTCGCCTGTGGACTCCCTCGAGTCACCCCATGGCTACTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp GCCATTCTGGAGCCGGGGAAGCCACTCACACTGGCCATTCAAGCTTaGCGGTGCACCCACGGTGAAATTCATAGCCCCCGTGCCATTGGT +
Preference number: 5 (lower is better)
Translates to: AILEPGKPLTLAIQA*RCTHGEIHSPRAIG
Trigger: ACCAATGGCACGGGGGCTATGAATTTCACCGTGGGTGCACCGGCAAGCTTGAATGGCCAGTGTGAGTGGCTTCCCCGGCTCCAGAATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp AAGGTATTGGTGGAGAGGCTGCTGTGTAGTGGCCCCATCATGCTATaGTGGAGGCCAGCTGCCTGTGTGCTCAGTGTGCCCGGCGTCACA +
Preference number: 5 (lower is better)
Translates to: KVLVERLLCSGPIML*WRPAACVLSVPGVT
Trigger: TGTGACGCCGGGCACACTGAGCACACAGGCAGCTGGCCTCCAGCATAGCATGATGGGGCCACTACACAGCAGCCTCTCCACCAATACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp GTTCTGTGGCTGCACCTGCTGGGTCTGCACCAGGTGAGGCTGTGTTaGCAGCCGTGTGTTGGGCAGGCCCTGGTAAATAATCGGGGACAA +
Preference number: 5 (lower is better)
Translates to: VLWLHLLGLHQVRLC*QPCVGQALVNNRGQ
Trigger: TTGTCCCCGATTATTTACCAGGGCCTGCCCAACACACGGCTGGCAACACAGCCTCACCTGGTGCAGACCCAGCAGGTGCAGCCACAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp AAGACCACGTTGGTGTGCAGCACGTGGCTGAGCTCCCGCAGAAAGTaGAAGGAGTTGTTCCGTAGCTGGTCGGGTGGAAGCAGCACCACC +
Preference number: 5 (lower is better)
Translates to: KTTLVCSTWLSSRRK*KELFRSWSGGSSTT
Trigger: GGTGGTGCTGCTTCCACCCGACCAGCTACGGAACAACTCCTTCCACTTTCTGCGGGAGCTCAGCCACGTGCTGCACACCAACGTGGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp TGGCTGGGCACCATGCCATTCTGGAGCCGGGGAAGCCACTCACACTaGCCATTCAAGCTTGCCGGTGCACCCACGGTGAAATTCATAGCC +
Preference number: 5 (lower is better)
Translates to: WLGTMPFWSRGSHSH*PFKLAGAPTVKFIA
Trigger: GGCTATGAATTTCACCGTGGGTGCACCGGCAAGCTTGAATGGCCAGTGTGAGTGGCTTCCCCGGCTCCAGAATGGCATGGTGCCCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATCAGTTGGAGCCCTCGTaGCAGGGGTTGCTGATGCAC +
Preference number: 5 (lower is better)
Translates to: STLKACPHPGQFGDQRPHQLEPS*QGLLMH
Trigger: GTGCATCAGCAACCCCTGCAACGAGGGCTCCAACTG...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGATTGCCGTTGACAGGGTaGGTGTCACAGTTGGAGCCC +
Preference number: 5 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGLPLTG*VSQLEP
Trigger: GGGCTCCAACTGTGACACCAACCCTGTCAACGGCAA...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATTCCATGCAGTGGCCATaGTGCAGACAGGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: STLKACPHPGQFGDQRPHSMQWP*CRQGLL
Trigger: CAGCAGCCCCTGTCTGCACAATGGCCACTGCATGGA...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGTCGCAGAAGGCTGTGTaGATGCCATCGGTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRSQKAV*MPSVQE
Trigger: TTCCTGCACCGATGGCATCAACACAGCCTTCTGCGA...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp CTTTGGCAGTCAGGTGTTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCTCCACACAGGTGCCATaGTTGAAGCACTTGGGGCTT +
Preference number: 5 (lower is better)
Translates to: LWQSGVRSPGPGRDSPSVSTQVP*LKHLGL
Trigger: AAGCCCCAAGTGCTTCAACAATGGCACCTGTGTGGA...GACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAACACCTGACTGCCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGGATCATCTGCTGGCCTaGCGCATCACGCTTGAAGAC +
Preference number: 5 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRDHLLA*RITLED
Trigger: GTCTTCAAGCGTGATGCGCAAGGCCAGCAGATGATC...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp ACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAAGGATGTTGTCCTGGATGTaGGCATCTGCACTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: TRRGGPEAGSTHIPAHSRMLSWM*ASALAS
Trigger: GGAGGCCAGTGCAGATGCCAACATCCAGGACAACAT...CCTTGAGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp CCTGAACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTCAATGCAAAGCCGACTaGCCTAGGTCATCCACGGCA +
Preference number: 5 (lower is better)
Translates to: PEPGGVAQKQAPPTFQHTQCKAD*PRSSTA
Trigger: TGCCGTGGATGACCTAGGCAAGTCGGCTTTGCATTG...AGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp GCACAGTCACACTTGTACCCATTGAGGCCATCCCGGCAAGCTCCGTaGATGCAGGGGTTACTGTTGCACTCGTTGACCTCGGACAGGCAC +
Preference number: 5 (lower is better)
Translates to: AQSHLYPLRPSRQAP*MQGLLLHSLTSDRH
Trigger: GTGCCTGTCCGAGGTCAACGAGTGCAACAGTAACCCCTGCATCCACGGAGCTTGCCGGGATGGCCTCAATGGGTACAAGTGTGACTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp TGGCCTTGCGCATCACGCTTGAAGACCACGTTGGTGTGCAGCACGTaGCTGAGCTCCCGCAGAAAGTGGAAGGAGTTGTTCCGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: WPCASRLKTTLVCST*LSSRRKWKELFRSW
Trigger: CCAGCTACGGAACAACTCCTTCCACTTTCTGCGGGAGCTCAGCCACGTGCTGCACACCAACGTGGTCTTCAAGCGTGATGCGCAAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 90 bp AGTTTGTTCCACTCCACCCAGGGGCACAGTCACACTTGTACCCATTaGGGCCATCCCGGCAAGCTCCGTGGATGCAGGGGTTACTGTTGC +
Preference number: 5 (lower is better)
Translates to: SLFHSTQGHSHTCTH*GHPGKLRGCRGYCC
Trigger: GCAACAGTAACCCCTGCATCCACGGAGCTTGCCGGGATGGCCTCAATGGGTACAAGTGTGACTGTGCCCCTGGGTGGAGTGGAACAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 90 bp ATAGGCAGGTGGGACTACGTGGGCCCGAGATGCATGTACCACCGTTaGGGCAGCGTAAGCTGCCACAAGTGCGGGCATCATTCTCACATG +
Preference number: 5 (lower is better)
Translates to: IGRWDYVGPRCMYHR*GSVSCHKCGHHSHM
Trigger: CATGTGAGAATGATGCCCGCACTTGTGGCAGCTTACGCTGCCTCAACGGTGGTACATGCATCTCGGGCCCACGTAGTCCCACCTGCCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp AGGAGCACAACAGCAGCATCCACATTGTTCACCGCGGCCGCCCAATaGAAAGCCGACTTGCCTAGGTCATCCACGGCATTGACGTCAGCA +
Preference number: 5 (lower is better)
Translates to: RSTTAASTLFTAAAQ*KADLPRSSTALTSA
Trigger: TGCTGACGTCAATGCCGTGGATGACCTAGGCAAGTCGGCTTTGCATTGGGCGGCCGCGGTGAACAATGTGGATGCTGCTGTTGTGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp TTCTTACACGGTGTGCTGAGGCAAGGATTGGAGTCCTGGCATCGTTaGCCCACAAAGGCTCCGCTGCAGACACAGGCTTCAGTGCCGTTG +
Preference number: 5 (lower is better)
Translates to: FLHGVLRQGLESWHR*PTKAPLQTQASVPL
Trigger: CAACGGCACTGAAGCCTGTGTCTGCAGCGGAGCCTTTGTGGGCCAACGATGCCAGGACTCCAATCCTTGCCTCAGCACACCGTGTAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp GGTATAGGTGTTGGGCCCATCCAGGCACTTGGCACCGTTCTTGCATaGTGTGCTGGCACACTCATCCACATCATACTGGCACAGGTGCCC +
Preference number: 5 (lower is better)
Translates to: GIGVGPIQALGTVLA*CAGTLIHIILAQVP
Trigger: GGGCACCTGTGCCAGTATGATGTGGATGAGTGTGCCAGCACACCATGCAAGAACGGTGCCAAGTGCCTGGATGGGCCCAACACCTATACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp AGTGACGCAAGAGCACCTAGGAAGGCAGCCACATCGGTGGCACTCTaGAAGCACTGCGAGGATGACTGCACACATTGCCGGTTGTCGATC +
Preference number: 5 (lower is better)
Translates to: SDARAPRKAATSVAL*KHCEDDCTHCRLSI
Trigger: GATCGACAACCGGCAATGTGTGCAGTCATCCTCGCAGTGCTTCCAGAGTGCCACCGATGTGGCTGCCTTCCTAGGTGCTCTTGCGTCACT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATGCACTCATTAACATCTaGCCTGCAGGTGGGGCCATG +
Preference number: 5 (lower is better)
Translates to: STLKACPHPGQFGDQRPHALINI*PAGGAM
Trigger: CATGGCCCCACCTGCAGGCAAGATGTTAATGAGTGC...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCAAGGTTGATCTCACAGTaGGGCCCTGTGGTTCCCTTG +
Preference number: 5 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGARLISQ*GPVVPL
Trigger: CAAGGGAACCACAGGGCCCAACTGTGAGATCAACCT...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCAATGCATGTACCACCGTaGAGGCAGCGTAAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGAMHVPP*RQRKLP
Trigger: TGGCAGCTTACGCTGCCTCAACGGTGGTACATGCAT...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp ACAGTGGGGCAGGGCAGGGGAGAAGTACTCCCAAGGCCCATAAACACTACTACACGCTTGAAGACCACGTaGGTGTGCAGCACGTGGCTG +
Preference number: 5 (lower is better)
Translates to: TVGQGRGEVLPRPINTTTRLKTT*VCSTWL
Trigger: CAGCCACGTGCTGCACACCAACGTGGTCTTCAAGCG...TGTAGTAGTGTTTATGGGCCTTGGGAGTACTTCTCCCCTGCCCTGCCCCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATGGAGTACGGCCCATGTaGTCCTGGATGTTGGCATCT +
Preference number: 5 (lower is better)
Translates to: STLKACPHPGQFGDQRPHGVRPM*SWMLAS
Trigger: AGATGCCAACATCCAGGACAACATGGGCCGTACTCC...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGATTCTTCCTCCGTGCCTaGAGGTCCTTAGCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGFFLRA*RSLASL
Trigger: CAAGGAAGCTAAGGACCTCAAGGCACGGAGGAAGAA...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 90 bp CATGGTCCACAACGTGGCACGTTCCAGCATTCTTACACGGTGTGCTaGGGCAAGGATTGGAGTCCTGGCATCGTTGGCCCACAAAGGCTC +
Preference number: 5 (lower is better)
Translates to: HGPQRGTFQHSYTVC*GKDWSPGIVGPQRL
Trigger: GAGCCTTTGTGGGCCAACGATGCCAGGACTCCAATCCTTGCCTCAGCACACCGTGTAAGAATGCTGGAACGTGCCACGTTGTGGACCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp CGCAGGTATAGGTGTTGGGCCCATCCAGGCACTTGGCACCGTTCTTaGATGGTGTGCTGGCACACTCATCCACATCATACTGGCACAGGT +
Preference number: 5 (lower is better)
Translates to: RRYRCWAHPGTWHRS*MVCWHTHPHHTGTG
Trigger: ACCTGTGCCAGTATGATGTGGATGAGTGTGCCAGCACACCATGCAAGAACGGTGCCAAGTGCCTGGATGGGCCCAACACCTATACCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp ATCATCTGCTGGCCTTGCGCATCACGCTTGAAGACCACGTTGGTGTaGAGCACGTGGCTGAGCTCCCGCAGAAAGTGGAAGGAGTTGTTC +
Preference number: 5 (lower is better)
Translates to: IICWPCASRLKTTLV*STWLSSRRKWKELF
Trigger: GAACAACTCCTTCCACTTTCTGCGGGAGCTCAGCCACGTGCTGCACACCAACGTGGTCTTCAAGCGTGATGCGCAAGGCCAGCAGATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp GTTCCAGCATTCTTACACGGTGTGCTGAGGCAAGGATTGGAGTCCTaGCATCGTTGGCCCACAAAGGCTCCGCTGCAGACACAGGCTTCA +
Preference number: 5 (lower is better)
Translates to: VPAFLHGVLRQGLES*HRWPTKAPLQTQAS
Trigger: TGAAGCCTGTGTCTGCAGCGGAGCCTTTGTGGGCCAACGATGCCAGGACTCCAATCCTTGCCTCAGCACACCGTGTAAGAATGCTGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp AGTGGGTCCCTGTGTAACCTTCTGTACACACGCAGGTATAGGTGTTaGGCCCATCCAGGCACTTGGCACCGTTCTTGCATGGTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: SGSLCNLLYTRRYRC*AHPGTWHRSCMVCW
Trigger: CCAGCACACCATGCAAGAACGGTGCCAAGTGCCTGGATGGGCCCAACACCTATACCTGCGTGTGTACAGAAGGTTACACAGGGACCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp GCGGTAGCTGCCATTGGTGTTCTGGCAGGAGGCCCCATGGCGACATaGGCTTTTCACACACTCATTGATGTCAACCTCGCAGGTTTGACC +
Preference number: 5 (lower is better)
Translates to: AVAAIGVLAGGPMAT*AFHTLIDVNLAGLT
Trigger: GGTCAAACCTGCGAGGTTGACATCAATGAGTGTGTGAAAAGCCCATGTCGCCATGGGGCCTCCTGCCAGAACACCAATGGCAGCTACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp GCCCGGCACTCGCAGTGGAAGTCATTAACACGCTGCACACAGTTCTaGGTGCCACGTGGGTCACAGGGGTTGGAGAGACATTCATTGACA +
Preference number: 5 (lower is better)
Translates to: ARHSQWKSLTRCTQF*VPRGSQGLERHSLT
Trigger: TGTCAATGAATGTCTCTCCAACCCCTGTGACCCACGTGGCACCCAGAACTGTGTGCAGCGTGTTAATGACTTCCACTGCGAGTGCCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp AAGCCATCAAAGAGGCAGCCGGCCGAGTTGCACTGGCTGTCACAGTaGCCGTCGCTAAAATACTTCCAGCACTGTAGAGACTGCGTGCAG +
Preference number: 5 (lower is better)
Translates to: KPSKRQPAELHWLSQ*PSLKYFQHCRDCVQ
Trigger: CTGCACGCAGTCTCTACAGTGCTGGAAGTATTTTAGCGACGGCCACTGTGACAGCCAGTGCAACTCGGCCGGCTGCCTCTTTGATGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp CAGTCCGTCTGTCCTCAGTTGGATTTGGATGATGCTGTTTGGAGGGATGCACAGGGAGTCCTGGCATCGTaGGCCCACAAAGGCTCCGCT +
Preference number: 5 (lower is better)
Translates to: QSVCPQLDLDDAVWRDAQGVLAS*AHKGSA
Trigger: AGCGGAGCCTTTGTGGGCCAACGATGCCAGGACTCC...CTGTGCATCCCTCCAAACAGCATCATCCAAATCCAACTGAGGACAGACGGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp CAGTCCGTCTGTCCTCAGTTGGATTTGGATGATGCTGTTTGGAGGGATGCACAGAGGCACTGGCCACCATaGGCACAGGGGTTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: QSVCPQLDLDDAVWRDAQRHWPP*AQGLEA
Trigger: TGCCTCCAACCCCTGTGCCAATGGTGGCCAGTGCCT...CTGTGCATCCCTCCAAACAGCATCATCCAAATCCAACTGAGGACAGACGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp ACAGTGGGGCAGGGCAGGGGAGAAGTACTCCCAAGGCCCATAAACACTACTACACTGATGCACGCATCGTaGAGGTGGCACAGCAGACCT +
Preference number: 5 (lower is better)
Translates to: TVGQGRGEVLPRPINTTTLMHAS*RWHSRP
Trigger: AGGTCTGCTGTGCCACCTCAACGATGCGTGCATCAG...TGTAGTAGTGTTTATGGGCCTTGGGAGTACTTCTCCCCTGCCCTGCCCCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATTTCTGCATGTCCTTGTaGGCTCCGTTCTTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: STLKACPHPGQFGDQRPHFCMSL*APFFRS
Trigger: GCTCCTGAAGAACGGAGCCAACAAGGACATGCAGAA...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp ACAGTGGGGCAGGGCAGGGGAGAAGTACTCCCAAGGCCCATAAACACTACTACATCCAACAGGCAGCCCTaGCCATCCTGGGACTTCTTC +
Preference number: 5 (lower is better)
Translates to: TVGQGRGEVLPRPINTTTSNRQP*PSWDFF
Trigger: GAAGAAGTCCCAGGATGGCAAGGGCTGCCTGTTGGA...TGTAGTAGTGTTTATGGGCCTTGGGAGTACTTCTCCCCTGCCCTGCCCCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp CCCAGCCACATGCGTGATTATTACACTGCAGGTTGCAGACCTTATTaGCTGCATCCACCTGGCACTCAGGCAGCTCACAGGCCTCCTCAA +
Preference number: 5 (lower is better)
Translates to: PSHMRDYYTAGCRPY*LHPPGTQAAHRPPQ
Trigger: TTGAGGAGGCCTGTGAGCTGCCTGAGTGCCAGGTGGATGCAGGCAATAAGGTCTGCAACCTGCAGTGTAATAATCACGCATGTGGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp TTAGGAGCCCAGGCCCAGGCCGGGACAGTCCGTCTGTCCTCAGTTGGATTTGGACCATTTTGGCAGGGATaGCTGGCACATTCATTGATG +
Preference number: 5 (lower is better)
Translates to: LGAQAQAGTVRLSSVGFGPFWQG*LAHSLM
Trigger: CATCAATGAATGTGCCAGCAATCCCTGCCAAAATGG...TCCAAATCCAACTGAGGACAGACGGACTGTCCCGGCCTGGGCCTGGGCTCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp ACAGTGGGGCAGGGCAGGGGAGAAGTACTCCCAAGGCCCATAAACACTACTACAACACAGGTGCCATTGTaGAAGCACTTGGGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: TVGQGRGEVLPRPINTTTTQVPL*KHLGLR
Trigger: CCGAAGCCCCAAGTGCTTCAACAATGGCACCTGTGT...TGTAGTAGTGTTTATGGGCCTTGGGAGTACTTCTCCCCTGCCCTGCCCCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp TTCATATTTTACAGACACACAGGGAACTTCACCCTGACCAGGAAAATCAAGGCTTGCTGCCGCCGGCGCTaGCGGGACAGCAGCACCCCA +
Preference number: 5 (lower is better)
Translates to: FIFYRHTGNFTLTRKIKACCRRR*RDSSTP
Trigger: TGGGGTGCTGCTGTCCCGCAAGCGCCGGCGGCAGCA...AGCCTTGATTTTCCTGGTCAGGGTGAAGTTCCCTGTGTGTCTGTAAAATATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATTTGTTCTGCATGTCCTaGTTGGCTCCGTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: STLKACPHPGQFGDQRPHLFCMS*LAPFFR
Trigger: CCTGAAGAACGGAGCCAACAAGGACATGCAGAACAA...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 90 bp AGCTCTCAGTACAGTCAGGTGTGTTGTTCTCGCAGTGGATGCCATTaGAGCCCACGGGGCAGGTACATGTGTAGCTGTCCACACAGTCAG +
Preference number: 5 (lower is better)
Translates to: SSQYSQVCCSRSGCH*SPRGRYMCSCPHSQ
Trigger: CTGACTGTGTGGACAGCTACACATGTACCTGCCCCGTGGGCTTCAATGGCATCCACTGCGAGAACAACACACCTGACTGTACTGAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 90 bp AACCGGAACTTCTTGGTCTCCAGGTCTTCGTCTCCCCACTCGTTCTaGTTGTCGTCCATCAGAGCACCATCTGAGGCATTCTTCAGGGGC +
Preference number: 5 (lower is better)
Translates to: NRNFLVSRSSSPHSF*LSSIRAPSEAFFRG
Trigger: GCCCCTGAAGAATGCCTCAGATGGTGCTCTGATGGACGACAATCAGAACGAGTGGGGAGACGAAGACCTGGAGACCAAGAAGTTCCGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp CTTCTGTACACACGCAGGTATAGGTGTTGGGCCCATCCAGGCACTTaGCACCGTTCTTGCATGGTGTGCTGGCACACTCATCCACATCAT +
Preference number: 5 (lower is better)
Translates to: LLYTRRYRCWAHPGT*HRSCMVCWHTHPHH
Trigger: ATGATGTGGATGAGTGTGCCAGCACACCATGCAAGAACGGTGCCAAGTGCCTGGATGGGCCCAACACCTATACCTGCGTGTGTACAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp GCACCAGCGCACAAGGTTCTGGCAGTTGAGACCAGTGTAGCCCTGTaGGCAGGTACACTTATAAGTACCATAGCTGTCTTGGCAGGTACC +
Preference number: 5 (lower is better)
Translates to: APAHKVLAVETSVAL*AGTLISTIAVLAGT
Trigger: GGTACCTGCCAAGACAGCTATGGTACTTATAAGTGTACCTGCCCACAGGGCTACACTGGTCTCAACTGCCAGAACCTTGTGCGCTGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028288.5
ENSMUST00000132820.2
CDS CCA 90 bp CACTCAGGTCAGGGAGAACTACTGGCTCCTCAAACCGGAACTTCTTaGTCTCCAGGTCTTCGTCTCCCCACTCGTTCTGATTGTCGTCCA +
Preference number: 5 (lower is better)
Translates to: HSGQGELLAPQTGTS*SPGLRLPTRSDCRP
Trigger: TGGACGACAATCAGAACGAGTGGGGAGACGAAGACCTGGAGACCAAGAAGTTCCGGTTTGAGGAGCCAGTAGTTCTCCCTGACCTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCATGGAACTCATTGATCTaGTCCATGCAGTGGCCATTG +
Preference number: 5 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGAWNSLI*SMQWPL
Trigger: CAATGGCCACTGCATGGACAAGATCAATGAGTTCCA...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp CAGTCCGTCTGTCCTCAGTTGGATTTGGATGATGCTGTTTGGAGGGATGCACAGCACTTGGCACCGTTCTaGCATGGTGTGCTGGCACAC +
Preference number: 5 (lower is better)
Translates to: QSVCPQLDLDDAVWRDAQHLAPF*HGVLAH
Trigger: GTGTGCCAGCACACCATGCAAGAACGGTGCCAAGTG...CTGTGCATCCCTCCAAACAGCATCATCCAAATCCAACTGAGGACAGACGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp CCTGAACCAGGAGGGGTGGCCCAGAAGCAGGCTCCACCCACATTCCAGCACACTGACTCACACTCGTTGTaGTTGATGTCACAGTTTGTT +
Preference number: 5 (lower is better)
Translates to: PEPGGVAQKQAPPTFQHTDSHSL*LMSQFV
Trigger: AACAAACTGTGACATCAACAACAACGAGTGTGAGTC...AGTGTGCTGGAATGTGGGTGGAGCCTGCTTCTGGGCCACCCCTCCTGGTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp ACAGTGGGGCAGGGCAGGGGAGAAGTACTCCCAAGGCCCATAAACACTACTACATCTTCTTCTTCACTGTaGCCTGTCTCAAGGCCCCCT +
Preference number: 5 (lower is better)
Translates to: TVGQGRGEVLPRPINTTTSSSSL*PVSRPP
Trigger: AGGGGGCCTTGAGACAGGCAACAGTGAAGAAGAAGA...TGTAGTAGTGTTTATGGGCCTTGGGAGTACTTCTCCCCTGCCCTGCCCCACTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp CCAACACCACCTCACACGTGGCTCCTGTATATGGCAGAGGACAGTTaGACTTGTATCCAGCGACATCATCAATGCAGGTCCCCTGGTTCA +
Preference number: 5 (lower is better)
Translates to: PTPPHTWLLYMAEDS*TCIQRHHQCRSPGS
Trigger: TGAACCAGGGGACCTGCATTGATGATGTCGCTGGATACAAGTGCAACTGTCCTCTGCCATATACAGGAGCCACGTGTGAGGTGGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 90 bp CTGTCACAGTGGCCGTCGCTAAAATACTTCCAGCACTGTAGAGACTaGGTGCAGTTCTTCCAGGGGTCATTGAAGTTGAGGGAGCAGTCG +
Preference number: 5 (lower is better)
Translates to: LSQWPSLKYFQHCRD*VQFFQGSLKLREQS
Trigger: CGACTGCTCCCTCAACTTCAATGACCCCTGGAAGAACTGCACGCAGTCTCTACAGTGCTGGAAGTATTTTAGCGACGGCCACTGTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp AGCACACTCAAGGCATGTCCCCACCCAGGCCAGTTTGGGGATCAGAGGCCACATGCACATTCGTCAATGTaGACGTTACACATGCTTCCT +
Preference number: 5 (lower is better)
Translates to: STLKACPHPGQFGDQRPHAHSSM*TLHMLP
Trigger: AGGAAGCATGTGTAACGTCAACATTGACGAATGTGC...ATGTGGCCTCTGATCCCCAAACTGGCCTGGGTGGGGACATGCCTTGAGTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp CAGTCCGTCTGTCCTCAGTTGGATTTGGATGATGCTGTTTGGAGGGATGCACAGTTACTGTTGCACTCGTaGACCTCGGACAGGCACGTG +
Preference number: 5 (lower is better)
Translates to: QSVCPQLDLDDAVWRDAQLLLHS*TSDRHV
Trigger: CACGTGCCTGTCCGAGGTCAACGAGTGCAACAGTAA...CTGTGCATCCCTCCAAACAGCATCATCCAAATCCAACTGAGGACAGACGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp ACAGTGGGGCAGGGCAGGGGAGAAGTACTCCCAAGGCCCATAAACACTACTACATCAAACCGGAACTTCTaGGTCTCCAGGTCTTCGTCT +
Preference number: 5 (lower is better)
Translates to: TVGQGRGEVLPRPINTTTSNRNF*VSRSSS
Trigger: AGACGAAGACCTGGAGACCAAGAAGTTCCGGTTTGA...TGTAGTAGTGTTTATGGGCCTTGGGAGTACTTCTCCCCTGCCCTGCCCCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp TTCAAGTCCACACTGGTGGTTACAGAAAGTGTACAAACCACATCATCTGACTTGCCACAAGCCAGCCCTTaGGTGCTGGGCTTGCGGGCC +
Preference number: 5 (lower is better)
Translates to: FKSTLVVTESVQTTSSDLPQASP*VLGLRA
Trigger: GGCCCGCAAGCCCAGCACCAAAGGGCTGGCTTGTGG...CAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGACTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp TTCAAGTCCACACTGGTGGTTACAGAAAGTGTACAAACCACATCATCTGACTTGCGGCCCAGGTGCCCATaGGCTGCCGAGCTCACACTG +
Preference number: 5 (lower is better)
Translates to: FKSTLVVTESVQTTSSDLRPRCP*AAELTL
Trigger: CAGTGTGAGCTCGGCAGCCAATGGGCACCTGGGCCG...CAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGACTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 90 bp TCATTGAAGTTGAGGGAGCAGTCGCCACCATCCCAGCCACATGCGTaGTTATTACACTGCAGGTTGCAGACCTTATTGCCTGCATCCACC +
Preference number: 5 (lower is better)
Translates to: SLKLREQSPPSQPHA*LLHCRLQTLLPAST
Trigger: GGTGGATGCAGGCAATAAGGTCTGCAACCTGCAGTGTAATAATCACGCATGTGGCTGGGATGGTGGCGACTGCTCCCTCAACTTCAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp ACAGTGGGGCAGGGCAGGGGAGAAGTACTCCCAAGGCCCATAAACACTACTACATGGCATACATATGCATaGGAACTCCCCAATCTGGTC +
Preference number: 5 (lower is better)
Translates to: TVGQGRGEVLPRPINTTTWHTYA*ELPNLV
Trigger: GACCAGATTGGGGAGTTCCAATGCATATGTATGCCA...TGTAGTAGTGTTTATGGGCCTTGGGAGTACTTCTCCCCTGCCCTGCCCCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp CCACACCCTGCATGGCTTACTGGCTCAAGTTGTCAGGAAGGGGACAGTGGGGCATTGGACTCACACTCGTaGTTGTTGATGTCACAGTTT +
Preference number: 5 (lower is better)
Translates to: PHPAWLTGSSCQEGDSGALDSHS*LLMSQF
Trigger: AAACTGTGACATCAACAACAACGAGTGTGAGTCCAA...TGCCCCACTGTCCCCTTCCTGACAACTTGAGCCAGTAAGCCATGCAGGGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp ACAGTGGGGCAGGGCAGGGGAGAAGTACTCCCAAGGCCCATAAACACTACTACATGGCAGTCATCAACATaGATCTCACAGTGTACACCC +
Preference number: 5 (lower is better)
Translates to: TVGQGRGEVLPRPINTTTWQSST*ISQCTP
Trigger: GGGTGTACACTGTGAGATCAATGTTGATGACTGCCA...TGTAGTAGTGTTTATGGGCCTTGGGAGTACTTCTCCCCTGCCCTGCCCCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp TTCATATTTTACAGACACACAGGGAACTTCACCCTGACCAGGAAAATCAAGGCTGGGTTGGTGTCACAGTaGGAGCCCTCGTTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: FIFYRHTGNFTLTRKIKAGLVSQ*EPSLQG
Trigger: CCCCTGCAACGAGGGCTCCAACTGTGACACCAACCC...AGCCTTGATTTTCCTGGTCAGGGTGAAGTTCCCTGTGTGTCTGTAAAATATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp AGTAAGAATCAACATCTTAGGATGCGTCTGGTCATATCTATTAGGCATGGCACACTGAGCACGTCGCAGTaGACGCCAGTCCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: SKNQHLRMRLVISIRHGTLSTSQ*TPVQPL
Trigger: CAGCGGCTGGACTGGCGTCAACTGCGACGTGCTCAG...TGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp TTCATATTTTACAGACACACAGGGAACTTCACCCTGACCAGGAAAATCAAGGCTCCTTTGGTGCTGGGCTaGCGGGCCTTCTTGCCCTGT +
Preference number: 5 (lower is better)
Translates to: FIFYRHTGNFTLTRKIKAPLVLG*RAFLPC
Trigger: ACAGGGCAAGAAGGCCCGCAAGCCCAGCACCAAAGG...AGCCTTGATTTTCCTGGTCAGGGTGAAGTTCCCTGTGTGTCTGTAAAATATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp TTCATATTTTACAGACACACAGGGAACTTCACCCTGACCAGGAAAATCAAGGCTCCCACTGTAGAGCGCTaGATTGGGTGCTTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: FIFYRHTGNFTLTRKIKAPTVER*IGCLRS
Trigger: GCTGCGCAAGCACCCAATCAAGCGCTCTACAGTGGG...AGCCTTGATTTTCCTGGTCAGGGTGAAGTTCCCTGTGTGTCTGTAAAATATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 90 bp AGTGGCCATTGTGCAGACAGGGGCTGCTGGCGCACTCATCCGTGTTaGTTTCACAGTATACACCTTCATAACCTGGCATACATATGCATT +
Preference number: 5 (lower is better)
Translates to: SGHCADRGCWRTHPC*FHSIHLHNLAYICI
Trigger: AATGCATATGTATGCCAGGTTATGAAGGTGTATACTGTGAAATCAACACGGATGAGTGCGCCAGCAGCCCCTGTCTGCACAATGGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 90 bp GGCGCACTCATCCGTGTTGATTTCACAGTATACACCTTCATAACCTaGCATACATATGCATTGGAACTCCCCAATCTGGTCCAGGCAAGT +
Preference number: 5 (lower is better)
Translates to: GALIRVDFTVYTFIT*HTYALELPNLVQAS
Trigger: ACTTGCCTGGACCAGATTGGGGAGTTCCAATGCATATGTATGCCAGGTTATGAAGGTGTATACTGTGAAATCAACACGGATGAGTGCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp TCCATCTTTAAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGAGCATCTCAAGCCTCTaGCGGCGAGCGCGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: SIFKHVFTDTYSATGVYLSISSL*RRARAA
Trigger: TGCTGCCCGCGCTCGCCGCAAGAGGCTTGAGATGCT...CAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTTAAAGATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp TTCAAGTCCACACTGGTGGTTACAGAAAGTGTACAAACCACATCATCTGACTTGAGTAGCCCGTTGAATTaGGCAGGGCATAGACAGCGG +
Preference number: 5 (lower is better)
Translates to: FKSTLVVTESVQTTSSDLSSPLN*AGHRQR
Trigger: CCGCTGTCTATGCCCTGCCAAATTCAACGGGCTACT...CAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGACTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp TTCATATTTTACAGACACACAGGGAACTTCACCCTGACCAGGAAAATCAAGGCTCCAGGATCAGTGGAGTaGTGCCATCATGCATTCGGG +
Preference number: 5 (lower is better)
Translates to: FIFYRHTGNFTLTRKIKAPGSVE*CHHAFG
Trigger: CCCGAATGCATGATGGCACAACTCCACTGATCCTGG...AGCCTTGATTTTCCTGGTCAGGGTGAAGTTCCCTGTGTGTCTGTAAAATATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp AGTAAGAATCAACATCTTAGGATGCGTCTGGTCATATCTATTAGGCATGGCACACAGATGGCTTTGCCGTaGACAGGGTTGGTGTCACAG +
Preference number: 5 (lower is better)
Translates to: SKNQHLRMRLVISIRHGTQMALP*TGLVSQ
Trigger: CTGTGACACCAACCCTGTCAACGGCAAAGCCATCTG...TGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp TTCAAGTCCACACTGGTGGTTACAGAAAGTGTACAAACCACATCATCTGACTTGGCAATTGGCACCATTTaGGCAGGGATTGCTGGCACA +
Preference number: 5 (lower is better)
Translates to: FKSTLVVTESVQTTSSDLAIGTI*AGIAGT
Trigger: TGTGCCAGCAATCCCTGCCAAAATGGTGCCAATTGC...CAAGTCAGATGATGTGGTTTGTACACTTTCTGTAACCACCAGTGTGGACTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp TTCATATTTTACAGACACACAGGGAACTTCACCCTGACCAGGAAAATCAAGGCTAGGGGAGTCTCCTCCTaGTTGTTCTGCATGTCCTTG +
Preference number: 5 (lower is better)
Translates to: FIFYRHTGNFTLTRKIKARGVSS*LFCMSL
Trigger: CAAGGACATGCAGAACAACAAGGAGGAGACTCCCCT...AGCCTTGATTTTCCTGGTCAGGGTGAAGTTCCCTGTGTGTCTGTAAAATATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp AAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGATACTGCAAGGCTTGCGGGCCTTCTaGCCCTGTGTGGCAGACTTG +
Preference number: 5 (lower is better)
Translates to: KHVFTDTYSATGVYLILQGLRAF*PCVADL
Trigger: CAAGTCTGCCACACAGGGCAAGAAGGCCCGCAAGCC...TTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp TCCATCTTTAAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGGCGTGCTCACAAGGGTaGGCACCCAGAGCACACTCA +
Preference number: 5 (lower is better)
Translates to: SIFKHVFTDTYSATGVYLACSQG*APRAHS
Trigger: TGAGTGTGCTCTGGGTGCCAACCCTTGTGAGCACGC...CAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTTAAAGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp AAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGATACTGCAAGGCCCATCCAGGCACTaGGCACCGTTCTTGCATGGT +
Preference number: 5 (lower is better)
Translates to: KHVFTDTYSATGVYLILQGPSRH*APFLHG
Trigger: ACCATGCAAGAACGGTGCCAAGTGCCTGGATGGGCC...TTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp TTCATATTTTACAGACACACAGGGAACTTCACCCTGACCAGGAAAATCAAGGCTGCACATTCGTTGATGTaGGTCTGGCAATTAGGGCCA +
Preference number: 5 (lower is better)
Translates to: FIFYRHTGNFTLTRKIKAAHSLM*VWQLGP
Trigger: TGGCCCTAATTGCCAGACCAACATCAACGAATGTGC...AGCCTTGATTTTCCTGGTCAGGGTGAAGTTCCCTGTGTGTCTGTAAAATATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp AAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGATACTGCAACAGTGGTACTGCGTGTaGGTCTGCCAGCACCTGCCA +
Preference number: 5 (lower is better)
Translates to: KHVFTDTYSATGVYLILQQWYCV*VCQHLP
Trigger: TGGCAGGTGCTGGCAGACCAACACGCAGTACCACTG...TTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp AGTAAGAATCAACATCTTAGGATGCGTCTGGTCATATCTATTAGGCATGGCACACCATTCTTGCAAGGTTaGCCCCTGCAGCCATTGATG +
Preference number: 5 (lower is better)
Translates to: SKNQHLRMRLVISIRHGTPFLQG*PLQPLM
Trigger: CATCAATGGCTGCAGGGGCAAACCTTGCAAGAATGG...TGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp AGTAAGAATCAACATCTTAGGATGCGTCTGGTCATATCTATTAGGCATGGCACAAGAAAGTGGAAGGAGTaGTTCCGTAGCTGGTCGGGT +
Preference number: 5 (lower is better)
Translates to: SKNQHLRMRLVISIRHGTRKWKE*FRSWSG
Trigger: ACCCGACCAGCTACGGAACAACTCCTTCCACTTTCT...TGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp AAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGATACTGCAAGGGCTGCGCACCAGGTaGTACTCATCCAAAAGCCGC +
Preference number: 5 (lower is better)
Translates to: KHVFTDTYSATGVYLILQGLRTR*YSSKSR
Trigger: GCGGCTTTTGGATGAGTACAACCTGGTGCGCAGCCC...TTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp AGTAAGAATCAACATCTTAGGATGCGTCTGGTCATATCTATTAGGCATGGCACATCACTGAAGTGGTCCTaGCAGTACTGGTCATACAGG +
Preference number: 5 (lower is better)
Translates to: SKNQHLRMRLVISIRHGTSLKWS*QYWSYR
Trigger: CCTGTATGACCAGTACTGCAAGGACCACTTCAGTGA...TGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTCTTACT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp TCCATCTTTAAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGGCTGCCATCTCAGGCTaGGCTGCCACATTCAAGTGG +
Preference number: 5 (lower is better)
Translates to: SIFKHVFTDTYSATGVYLAAISG*AATFKW
Trigger: CCACTTGAATGTGGCAGCCAAGCCTGAGATGGCAGC...CAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTTAAAGATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp TCCATCTTTAAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGGTACAGTCAGGTGTGTaGTTCTCGCAGTGGATGCCA +
Preference number: 5 (lower is better)
Translates to: SIFKHVFTDTYSATGVYLVQSGV*FSQWMP
Trigger: TGGCATCCACTGCGAGAACAACACACCTGACTGTAC...CAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTTAAAGATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp CAGCATTTACAAATCATGAATCCTTGTTCATATTTTACAGACACACAGGGAACTACGTCAGCATGTGAGTaGATGAGGTCCTCCAGCATG +
Preference number: 5 (lower is better)
Translates to: QHLQIMNPCSYFTDTQGTTSACE*MRSSSM
Trigger: CATGCTGGAGGACCTCATCAACTCACATGCTGACGT...AGTTCCCTGTGTGTCTGTAAAATATGAACAAGGATTCATGATTTGTAAATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp CAGCATTTACAAATCATGAATCCTTGTTCATATTTTACAGACACACAGGGAACTTATGGCAGAGGACAGTaGCACTTGTATCCAGCGACA +
Preference number: 5 (lower is better)
Translates to: QHLQIMNPCSYFTDTQGTYGRGQ*HLYPAT
Trigger: TGTCGCTGGATACAAGTGCAACTGTCCTCTGCCATA...AGTTCCCTGTGTGTCTGTAAAATATGAACAAGGATTCATGATTTGTAAATGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp AAACATGTATTTACAGATACTTATTCTGCCACAGGCGTATACTTGATACTGCAATCTGGTCCTCGAACATaGACATCCATGCAGTCAGCA +
Preference number: 5 (lower is better)
Translates to: KHVFTDTYSATGVYLILQSGPRT*TSMQSA
Trigger: TGCTGACTGCATGGATGTCAATGTTCGAGGACCAGA...TTGCAGTATCAAGTATACGCCTGTGGCAGAATAAGTATCTGTAAATACATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS-3UTR CAA 90 bp CAGCATTTACAAATCATGAATCCTTGTTCATATTTTACAGACACACAGGGAACTTTATTACACTGCAGGTaGCAGACCTTATTGCCTGCA +
Preference number: 5 (lower is better)
Translates to: QHLQIMNPCSYFTDTQGTLLHCR*QTLLPA
Trigger: TGCAGGCAATAAGGTCTGCAACCTGCAGTGTAATAA...AGTTCCCTGTGTGTCTGTAAAATATGAACAAGGATTCATGATTTGTAAATGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp AGGAGCACGAAGGCGGCCGCTGCCACGTACATGAGGTaGAGCTGCGAGGGCAGCGGAGGCTCCACCGGCTCA +
Preference number: 6 (lower is better)
Translates to: RSTKAAAATYMR*SCEGSGGSTGS
Trigger: TGAGCCGGTGGAGCCTCCGCTGCCCTCGCAGCTGCACCTCATGTACGTGGCAGCGGCCGCCTTCGTGCTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp GTGCCCGGCGTCACACCCGGCCGTAGTGGGTTGTACTaGCTGGGCACCATGCCATTCTGGAGCCGGGGAAGC +
Preference number: 6 (lower is better)
Translates to: VPGVTPGRSGLY*LGTMPFWSRGS
Trigger: GCTTCCCCGGCTCCAGAATGGCATGGTGCCCAGCCAGTACAACCCACTACGGCCGGGTGTGACGCCGGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp GCCTGTGTGCTCAGTGTGCCCGGCGTCACACCCGGCCGTAGTGGGTaGTACTGGCTGGGCACCATGCCATTCTGGAGCCGGGGAAGCCAC +
Preference number: 6 (lower is better)
Translates to: ACVLSVPGVTPGRSG*YWLGTMPFWSRGSH
Trigger: GTGGCTTCCCCGGCTCCAGAATGGCATGGTGCCCAGCCAGTACAACCCACTACGGCCGGGTGTGACGCCGGGCACACTGAGCACACAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp ACCTGGCACTCAGGCAGCTCACAGGCCTCCTCAATCTaGGGTGGGGGAATGTCGCGCCCAGCGCCACCTGTG +
Preference number: 6 (lower is better)
Translates to: TWHSGSSQASSI*GGGMSRPAPPV
Trigger: CACAGGTGGCGCTGGGCGCGACATTCCCCCACCGCAGATTGAGGAGGCCTGTGAGCTGCCTGAGTGCCAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp TCGCACCTCCCTCCATTCAGGCAGGTCCCACTTGGCTaGGAGCATCTCAAGCCTCTTGCGGCGAGCGCGGGC +
Preference number: 6 (lower is better)
Translates to: SHLPPFRQVPLG*EHLKPLAASAG
Trigger: GCCCGCGCTCGCCGCAAGAGGCTTGAGATGCTCCCAGCCAAGTGGGACCTGCCTGAATGGAGGGAGGTGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp CAGCATCCACCTCCCCCTGAGGCGGTGTTGGGGCCATaGCAGACATGCGCAGGTCAGCAGCGTCCAGGTGCT +
Preference number: 6 (lower is better)
Translates to: QHPPPPEAVLGP*QTCAGQQRPGA
Trigger: AGCACCTGGACGCTGCTGACCTGCGCATGTCTGCCATGGCCCCAACACCGCCTCAGGGGGAGGTGGATGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp CCGGCGTCACACCCGGCCGTAGTGGGTTGTACTGGCTaGGCACCATGCCATTCTGGAGCCGGGGAAGCCACT +
Preference number: 6 (lower is better)
Translates to: PASHPAVVGCTG*APCHSGAGEAT
Trigger: AGTGGCTTCCCCGGCTCCAGAATGGCATGGTGCCCAGCCAGTACAACCCACTACGGCCGGGTGTGACGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp GACTGCTGGGGCCCAGCGGTTGTACATCTGCCTGACTaGGCTCCCCACTCAAGAAGCTCCGGCCCAGGTGCC +
Preference number: 6 (lower is better)
Translates to: DCWGPAVVHLPD*APHSRSSGPGA
Trigger: GGCACCTGGGCCGGAGCTTCTTGAGTGGGGAGCCCAGTCAGGCAGATGTACAACCGCTGGGCCCCAGCAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp TCAGGGAACCAGAGCTGGCCATGCTGCCGCCGGCGCTaGCGGGACAGCAGCACCCCACAGCCCACAAAGAAC +
Preference number: 6 (lower is better)
Translates to: SGNQSWPCCRRR*RDSSTPQPTKN
Trigger: GTTCTTTGTGGGCTGTGGGGTGCTGCTGTCCCGCAAGCGCCGGCGGCAGCATGGCCAGCTCTGGTTCCCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp CTCAGTGTGCCCGGCGTCACACCCGGCCGTAGTGGGTaGTACTGGCTGGGCACCATGCCATTCTGGAGCCGG +
Preference number: 6 (lower is better)
Translates to: LSVPGVTPGRSG*YWLGTMPFWSR
Trigger: CCGGCTCCAGAATGGCATGGTGCCCAGCCAGTACAACCCACTACGGCCGGGTGTGACGCCGGGCACACTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp TGCCGTTGGCCACTTCGCACCTCCCTCCATTCAGGCAGGTCCCACTaGGCTGGGAGCATCTCAAGCCTCTTGCGGCGAGCGCGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: CRWPLRTSLHSGRSH*AGSISSLLRRARAA
Trigger: TGCTGCCCGCGCTCGCCGCAAGAGGCTTGAGATGCTCCCAGCCAAGTGGGACCTGCCTGAATGGAGGGAGGTGCGAAGTGGCCAACGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp GACCTGTATAGCCGGCCTGGCAGAGGCAGCGGTAGCTaGCATTGGTGTTCTGGCAGGAGGCCCCATGGCGAC +
Preference number: 6 (lower is better)
Translates to: DLYSRPGRGSGS*HWCSGRRPHGD
Trigger: GTCGCCATGGGGCCTCCTGCCAGAACACCAATGGCAGCTACCGCTGCCTCTGCCAGGCCGGCTATACAGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp CAATGGAGCCACGGATGTCCATGGGGTCCAGCTCCCTaGGCTGGCGCCCACCACTGGTACCAGGAAGCAGTG +
Preference number: 6 (lower is better)
Translates to: QWSHGCPWGPAP*AGAHHWYQEAV
Trigger: CACTGCTTCCTGGTACCAGTGGTGGGCGCCAGCGCAGGGAGCTGGACCCCATGGACATCCGTGGCTCCATTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp ACAGCCCACAAAGAACAGGAGCACGAAGGCGGCCGCTaGCACGTACATGAGGTGCAGCTGCGAGGGCAGCGG +
Preference number: 6 (lower is better)
Translates to: TAHKEQEHEGGR*HVHEVQLRGQR
Trigger: CCGCTGCCCTCGCAGCTGCACCTCATGTACGTGGCAGCGGCCGCCTTCGTGCTCCTGTTCTTTGTGGGCTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp GACACTTTGAAACCCTCAGGGAACCAGAGCTGGCCATaGTGCCGCCGGCGCTTGCGGGACAGCAGCACCCCA +
Preference number: 6 (lower is better)
Translates to: DTLKPSGNQSWP*CRRRLRDSSTP
Trigger: TGGGGTGCTGCTGTCCCGCAAGCGCCGGCGGCAGCATGGCCAGCTCTGGTTCCCTGAGGGTTTCAAAGTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp CACCCGGCCGTAGTGGGTTGTACTGGCTGGGCACCATaGCATTCTGGAGCCGGGGAAGCCACTCACACTGGC +
Preference number: 6 (lower is better)
Translates to: HPAVVGCTGWAP*HSGAGEATHTG
Trigger: GCCAGTGTGAGTGGCTTCCCCGGCTCCAGAATGGCATGGTGCCCAGCCAGTACAACCCACTACGGCCGGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp CACAGGCAGACTGCTGGGGCCCAGCGGTTGTACATCTaGCTGACTGGGCTCCCCACTCAAGAAGCTCCGGCC +
Preference number: 6 (lower is better)
Translates to: HRQTAGAQRLYI*LTGLPTQEAPA
Trigger: GGCCGGAGCTTCTTGAGTGGGGAGCCCAGTCAGGCAGATGTACAACCGCTGGGCCCCAGCAGTCTGCCTGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp GACATCACCCTCACACCGCTCCCCGACGAAGCCTGGTaGGCAGGTGCAGGTATAGCCACCCACCTGGTCCAC +
Preference number: 6 (lower is better)
Translates to: DITLTPLPDEAW*AGAGIATHLVH
Trigger: GTGGACCAGGTGGGTGGCTATACCTGCACCTGCCCACCAGGCTTCGTCGGGGAGCGGTGTGAGGGTGATGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp CGATCTCCAGGTAGACAATGGAGCCACGGATGTCCATaGGGTCCAGCTCCCTGCGCTGGCGCCCACCACTGG +
Preference number: 6 (lower is better)
Translates to: RSPGRQWSHGCP*GPAPCAGAHHW
Trigger: CCAGTGGTGGGCGCCAGCGCAGGGAGCTGGACCCCATGGACATCCGTGGCTCCATTGTCTACCTGGAGATCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp GCCTCTGACACTTTGAAACCCTCAGGGAACCAGAGCTaGCCATGCTGCCGCCGGCGCTTGCGGGACAGCAGC +
Preference number: 6 (lower is better)
Translates to: ASDTLKPSGNQS*PCCRRRLRDSS
Trigger: GCTGCTGTCCCGCAAGCGCCGGCGGCAGCATGGCCAGCTCTGGTTCCCTGAGGGTTTCAAAGTGTCAGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp CATGCAGTCAGCATCCACCTCCCCCTGAGGCGGTGTTaGGGCCATGGCAGACATGCGCAGGTCAGCAGCGTC +
Preference number: 6 (lower is better)
Translates to: HAVSIHLPLRRC*GHGRHAQVSSV
Trigger: GACGCTGCTGACCTGCGCATGTCTGCCATGGCCCCAACACCGCCTCAGGGGGAGGTGGATGCTGACTGCATG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp TTGAAACCCTCAGGGAACCAGAGCTGGCCATGCTGCCGCCGGCGCTaGCGGGACAGCAGCACCCCACAGCCCACAAAGAACAGGAGCACG +
Preference number: 6 (lower is better)
Translates to: LKPSGNQSWPCCRRR*RDSSTPQPTKNRST
Trigger: CGTGCTCCTGTTCTTTGTGGGCTGTGGGGTGCTGCTGTCCCGCAAGCGCCGGCGGCAGCATGGCCAGCTCTGGTTCCCTGAGGGTTTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 72 bp TCTGCGGTGGGGGAATGTCGCGCCCAGCGCCACCTGTaGAGCTGTAGTCCAGGATGTGGCACAGTAGCCCGT +
Preference number: 6 (lower is better)
Translates to: SAVGECRAQRHL*SCSPGCGTVAR
Trigger: ACGGGCTACTGTGCCACATCCTGGACTACAGCTTCACAGGTGGCGCTGGGCGCGACATTCCCCCACCGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 72 bp AAGTTCTGTGGCTGCACCTGCTGGGTCTGCACCAGGTaGGGCTGTGTTGCCAGCCGTGTGTTGGGCAGGCCC +
Preference number: 6 (lower is better)
Translates to: KFCGCTCWVCTR*GCVASRVLGRP
Trigger: GGGCCTGCCCAACACACGGCTGGCAACACAGCCTCACCTGGTGCAGACCCAGCAGGTGCAGCCACAGAACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp GGCCCACAAAGGCTCCGCTGCAGACACAGGCTTCAGTaGCGTTGGCCACTTCGCACCTCCCTCCATTCAGGC +
Preference number: 6 (lower is better)
Translates to: GPQRLRCRHRLQ*RWPLRTSLHSG
Trigger: GCCTGAATGGAGGGAGGTGCGAAGTGGCCAACGGCACTGAAGCCTGTGTCTGCAGCGGAGCCTTTGTGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp CCGCTGCGGCACTCACAGTGGTACTGCGTGTTGGTCTaGCAGCACCTGCCACCATTCTTGCAGGGAGCCGAG +
Preference number: 6 (lower is better)
Translates to: PLRHSQWYCVLV*QHLPPFLQGAE
Trigger: CTCGGCTCCCTGCAAGAATGGTGGCAGGTGCTGGCAGACCAACACGCAGTACCACTGTGAGTGCCGCAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp AGCACCAGGGTGCCGGCTGCCAGCCGCTCGGGTACATaGTCAGCACAGTCTAGGCCATCCCACTCACATTCG +
Preference number: 6 (lower is better)
Translates to: STRVPAASRSGT*SAQSRPSHSHS
Trigger: CGAATGTGAGTGGGATGGCCTAGACTGTGCTGAGCATGTACCCGAGCGGCTGGCAGCCGGCACCCTGGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp CACTTCGCACCTCCCTCCATTCAGGCAGGTCCCACTTaGCTGGGAGCATCTCAAGCCTCTTGCGGCGAGCGC +
Preference number: 6 (lower is better)
Translates to: HFAPPSIQAGPT*LGASQASCGER
Trigger: GCGCTCGCCGCAAGAGGCTTGAGATGCTCCCAGCCAAGTGGGACCTGCCTGAATGGAGGGAGGTGCGAAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp GCGGGCTGGAGATGCCCTCGGACCAATCAGAGATGTTaGAATGCGGGGAGGAGCTGGACCACTGGTCAGGGG +
Preference number: 6 (lower is better)
Translates to: AGWRCPRTNQRC*NAGRSWTTGQG
Trigger: CCCCTGACCAGTGGTCCAGCTCCTCCCCGCATTCCAACATCTCTGATTGGTCCGAGGGCATCTCCAGCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp CCACTTCGCACCTCCCTCCATTCAGGCAGGTCCCACTaGGCTGGGAGCATCTCAAGCCTCTTGCGGCGAGCG +
Preference number: 6 (lower is better)
Translates to: PLRTSLHSGRSH*AGSISSLLRRA
Trigger: CGCTCGCCGCAAGAGGCTTGAGATGCTCCCAGCCAAGTGGGACCTGCCTGAATGGAGGGAGGTGCGAAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp CCACTCCACCCAGGGGCACAGTCACACTTGTACCCATaGAGGCCATCCCGGCAAGCTCCGTGGATGCAGGGG +
Preference number: 6 (lower is better)
Translates to: PLHPGAQSHLYP*RPSRQAPWMQG
Trigger: CCCCTGCATCCACGGAGCTTGCCGGGATGGCCTCAATGGGTACAAGTGTGACTGTGCCCCTGGGTGGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp CGTTGGCCCACAAAGGCTCCGCTGCAGACACAGGCTTCAGTGCCGTaGGCCACTTCGCACCTCCCTCCATTCAGGCAGGTCCCACTTGGC +
Preference number: 6 (lower is better)
Translates to: RWPTKAPLQTQASVP*ATSHLPPFRQVPLG
Trigger: GCCAAGTGGGACCTGCCTGAATGGAGGGAGGTGCGAAGTGGCCAACGGCACTGAAGCCTGTGTCTGCAGCGGAGCCTTTGTGGGCCAACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp TTGACGCCAGTCCAGCCGCTGCGGCACTCACAGTGGTACTGCGTGTaGGTCTGCCAGCACCTGCCACCATTCTTGCAGGGAGCCGAGTCG +
Preference number: 6 (lower is better)
Translates to: LTPVQPLRHSQWYCV*VCQHLPPFLQGAES
Trigger: CGACTCGGCTCCCTGCAAGAATGGTGGCAGGTGCTGGCAGACCAACACGCAGTACCACTGTGAGTGCCGCAGCGGCTGGACTGGCGTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp CCCTCGAAGCCCGCAGGGCACCTACAGATGAATCCACGGGCGGTGTaGGAGGCCACGGCACAGACACCCCCATTCTTGCAAGGTTTGCCC +
Preference number: 6 (lower is better)
Translates to: PSKPAGHLQMNPRAV*EATAQTPPFLQGLP
Trigger: GGGCAAACCTTGCAAGAATGGGGGTGTCTGTGCCGTGGCCTCCAACACCGCCCGTGGATTCATCTGTAGGTGCCCTGCGGGCTTCGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp GCCGACTTGCCTAGGTCATCCACGGCATTGACGTCAGCATGTGAGTaGATGAGGTCCTCCAGCATGCCCTCCACGGCCAGGCGCGCAGCC +
Preference number: 6 (lower is better)
Translates to: ADLPRSSTALTSACE*MRSSSMPSTARRAA
Trigger: GGCTGCGCGCCTGGCCGTGGAGGGCATGCTGGAGGACCTCATCAACTCACATGCTGACGTCAATGCCGTGGATGACCTAGGCAAGTCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 72 bp GGGGCCATGGAAGCCAGGCGGGCAGCGACAGATGTATaGAGACTCAAAGGGCAGGCACTGGCCACCATTGGC +
Preference number: 6 (lower is better)
Translates to: GAMEARRAATDV*RLKGQALATIG
Trigger: GCCAATGGTGGCCAGTGCCTGCCCTTTGAGTCTTCATACATCTGTCGCTGCCCGCCTGGCTTCCATGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 72 bp CACTCCACCCAGGGGCACAGTCACACTTGTACCCATTaGGGCCATCCCGGCAAGCTCCGTGGATGCAGGGGT +
Preference number: 6 (lower is better)
Translates to: HSTQGHSHTCTH*GHPGKLRGCRG
Trigger: ACCCCTGCATCCACGGAGCTTGCCGGGATGGCCTCAATGGGTACAAGTGTGACTGTGCCCCTGGGTGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 72 bp CCTGCGCTGGCGCCCACCACTGGTACCAGGAAGCAGTaGAGAGGTGGCCCAACCCACTGTAGAGCGCTTGAT +
Preference number: 6 (lower is better)
Translates to: PALAPTTGTRKQ*RGGPTHCRALD
Trigger: ATCAAGCGCTCTACAGTGGGTTGGGCCACCTCTTCACTGCTTCCTGGTACCAGTGGTGGGCGCCAGCGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp CCAGCCCGGCACTCGCAGTGGAAGTCATTAACACGCTaGACACAGTTCTGGGTGCCACGTGGGTCACAGGGG +
Preference number: 6 (lower is better)
Translates to: PARHSQWKSLTR*TQFWVPRGSQG
Trigger: CCCCTGTGACCCACGTGGCACCCAGAACTGTGTGCAGCGTGTTAATGACTTCCACTGCGAGTGCCGGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp ATGTGGGCTCACAGGTGCCCTGATTGTAGCAGGGGTTaGTACCCACACAGGGGCTGCTGGCTGGGAACTGGC +
Preference number: 6 (lower is better)
Translates to: MWAHRCPDCSRG*YPHRGCWLGTG
Trigger: GCCAGTTCCCAGCCAGCAGCCCCTGTGTGGGTAGCAACCCCTGCTACAATCAGGGCACCTGTGAGCCCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp GTGTGCCACCCAGGGCAGTGCCATGCAGCTGTGGGCTaGGCACCAGGTTGTACTCATCCAAAAGCCGCACGA +
Preference number: 6 (lower is better)
Translates to: VCHPGQCHAAVG*APGCTHPKAAR
Trigger: TCGTGCGGCTTTTGGATGAGTACAACCTGGTGCGCAGCCCACAGCTGCATGGCACTGCCCTGGGTGGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp CATGGGGTGACTCGAGGGAGTCCACAGGCGACAGCATaGTCGAGCTGTCCAACAGGCAGCCCTTGCCATCCT +
Preference number: 6 (lower is better)
Translates to: HGVTRGSPQATA*SSCPTGSPCHP
Trigger: AGGATGGCAAGGGCTGCCTGTTGGACAGCTCGAGCATGCTGTCGCCTGTGGACTCCCTCGAGTCACCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp GTGGAGAGGCTGCTGTGTAGTGGCCCCATCATGCTATaGTGGAGGCCAGCTGCCTGTGTGCTCAGTGTGCCC +
Preference number: 6 (lower is better)
Translates to: VERLLCSGPIML*WRPAACVLSVP
Trigger: GGGCACACTGAGCACACAGGCAGCTGGCCTCCAGCATAGCATGATGGGGCCACTACACAGCAGCCTCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp GGCTTTCCTGGGGCAGAATGGTGTGCACAGGCAGACTaGTGGGGCCCAGCGGTTGTACATCTGCCTGACTGG +
Preference number: 6 (lower is better)
Translates to: GFPGAEWCAQAD*WGPAVVHLPDW
Trigger: CCAGTCAGGCAGATGTACAACCGCTGGGCCCCAGCAGTCTGCCTGTGCACACCATTCTGCCCCAGGAAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp CAAAGGCTCCGCTGCAGACACAGGCTTCAGTGCCGTTaGCCACTTCGCACCTCCCTCCATTCAGGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: QRLRCRHRLQCR*PLRTSLHSGRS
Trigger: GGACCTGCCTGAATGGAGGGAGGTGCGAAGTGGCCAACGGCACTGAAGCCTGTGTCTGCAGCGGAGCCTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp TCCAGCCGCTGCGGCACTCACAGTGGTACTGCGTGTTaGTCTGCCAGCACCTGCCACCATTCTTGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: SSRCGTHSGTAC*SASTCHHSCRE
Trigger: CTCCCTGCAAGAATGGTGGCAGGTGCTGGCAGACCAACACGCAGTACCACTGTGAGTGCCGCAGCGGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp CAGCGGCGTCCAGTGTGGCCAGCCCGGCACTCGCAGTaGAAGTCATTAACACGCTGCACACAGTTCTGGGTG +
Preference number: 6 (lower is better)
Translates to: QRRPVWPARHSQ*KSLTRCTQFWV
Trigger: CACCCAGAACTGTGTGCAGCGTGTTAATGACTTCCACTGCGAGTGCCGGGCTGGCCACACTGGACGCCGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp TGGTCATACAGGGGGTTGCACTGTCCCTCGGTGAGCTaGCAGTCGAAGCCATCAAAGAGGCAGCCGGCCGAG +
Preference number: 6 (lower is better)
Translates to: WSYRGLHCPSVS*QSKPSKRQPAE
Trigger: CTCGGCCGGCTGCCTCTTTGATGGCTTCGACTGCCAGCTCACCGAGGGACAGTGCAACCCCCTGTATGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp GTCCAGCCGCTGCGGCACTCACAGTGGTACTGCGTGTaGGTCTGCCAGCACCTGCCACCATTCTTGCAGGGA +
Preference number: 6 (lower is better)
Translates to: VQPLRHSQWYCV*VCQHLPPFLQG
Trigger: TCCCTGCAAGAATGGTGGCAGGTGCTGGCAGACCAACACGCAGTACCACTGTGAGTGCCGCAGCGGCTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp GCGGTGTTGGAGGCCACGGCACAGACACCCCCATTCTTGCAAGGTTaGCCCCTGCAGCCATTGATGACTGACTCACAGCGGCGTCCAGTG +
Preference number: 6 (lower is better)
Translates to: AVLEATAQTPPFLQG*PLQPLMTDSQRRPV
Trigger: CACTGGACGCCGCTGTGAGTCAGTCATCAATGGCTGCAGGGGCAAACCTTGCAAGAATGGGGGTGTCTGTGCCGTGGCCTCCAACACCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp GTGCCACCCAGGGCAGTGCCATGCAGCTGTGGGCTGCGCACCAGGTaGTACTCATCCAAAAGCCGCACGATATCGTGGTGCATACGCTCC +
Preference number: 6 (lower is better)
Translates to: VPPRAVPCSCGLRTR*YSSKSRTISWCIRS
Trigger: GGAGCGTATGCACCACGATATCGTGCGGCTTTTGGATGAGTACAACCTGGTGCGCAGCCCACAGCTGCATGGCACTGCCCTGGGTGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 72 bp TGTACCCCGAGGGGCAGGTGCAGATGGCTTTGCCGTTaGCAGGGTTGGTGTCACAGTTGGAGCCCTCGTTGC +
Preference number: 6 (lower is better)
Translates to: CTPRGRCRWLCR*QGWCHSWSPRC
Trigger: GCAACGAGGGCTCCAACTGTGACACCAACCCTGTCAACGGCAAAGCCATCTGCACCTGCCCCTCGGGGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 72 bp GCCGAGGGGCTCTCTCCGCTTCTTCTTGCTGGCCTCTaGCACTTTGAAACCCTCAGGGAACCAGAGCTGGCC +
Preference number: 6 (lower is better)
Translates to: AEGLSPLLLAGL*HFETLREPELA
Trigger: GGCCAGCTCTGGTTCCCTGAGGGTTTCAAAGTGTCAGAGGCCAGCAAGAAGAAGCGGAGAGAGCCCCTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 72 bp TGGGCTTGCGGGCCTTCTTGCCCTGTGTGGCAGACTTaGGATTGCCCAGGTAGCCATTGGGCGAGCAGAGTG +
Preference number: 6 (lower is better)
Translates to: WACGPSCPVWQT*DCPGSHWASRV
Trigger: CACTCTGCTCGCCCAATGGCTACCTGGGCAATCTCAAGTCTGCCACACAGGGCAAGAAGGCCCGCAAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp ATAAGCAGAGGTAGGAGTTGTCACGGTCCTGGCAGGTaGCCCCATGGCGGCACGGTTGGCTGTGGCACTCAT +
Preference number: 6 (lower is better)
Translates to: ISRGRSCHGPGR*PHGGTVGCGTH
Trigger: ATGAGTGCCACAGCCAACCGTGCCGCCATGGGGGCACCTGCCAGGACCGTGACAACTCCTACCTCTGCTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp ACTGCGTGTTGGTCTGCCAGCACCTGCCACCATTCTTaGAGGGAGCCGAGTCGCACCAGCGCACAAGGTTCT +
Preference number: 6 (lower is better)
Translates to: TACWSASTCHHS*REPSRTSAQGS
Trigger: AGAACCTTGTGCGCTGGTGCGACTCGGCTCCCTGCAAGAATGGTGGCAGGTGCTGGCAGACCAACACGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp GAGCCGGGGAAGCCACTCACACTGGCCATTCAAGCTTaGCGGTGCACCCACGGTGAAATTCATAGCCCCCGT +
Preference number: 6 (lower is better)
Translates to: EPGKPLTLAIQA*RCTHGEIHSPR
Trigger: ACGGGGGCTATGAATTTCACCGTGGGTGCACCGGCAAGCTTGAATGGCCAGTGTGAGTGGCTTCCCCGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp AGCTCCCGCAGAAAGTGGAAGGAGTTGTTCCGTAGCTaGTCGGGTGGAAGCAGCACCACCAGCACCAGGGTG +
Preference number: 6 (lower is better)
Translates to: SSRRKWKELFRS*SGGSSTTSTRV
Trigger: CACCCTGGTGCTGGTGGTGCTGCTTCCACCCGACCAGCTACGGAACAACTCCTTCCACTTTCTGCGGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp TTTCCTGGGGCAGAATGGTGTGCACAGGCAGACTGCTaGGGCCCAGCGGTTGTACATCTGCCTGACTGGGCT +
Preference number: 6 (lower is better)
Translates to: FPGAEWCAQADC*GPAVVHLPDWA
Trigger: AGCCCAGTCAGGCAGATGTACAACCGCTGGGCCCCAGCAGTCTGCCTGTGCACACCATTCTGCCCCAGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp ACAAAGGCTCCGCTGCAGACACAGGCTTCAGTGCCGTaGGCCACTTCGCACCTCCCTCCATTCAGGCAGGTC +
Preference number: 6 (lower is better)
Translates to: TKAPLQTQASVP*ATSHLPPFRQV
Trigger: GACCTGCCTGAATGGAGGGAGGTGCGAAGTGGCCAACGGCACTGAAGCCTGTGTCTGCAGCGGAGCCTTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp CGGTGTGCTGAGGCAAGGATTGGAGTCCTGGCATCGTaGGCCCACAAAGGCTCCGCTGCAGACACAGGCTTC +
Preference number: 6 (lower is better)
Translates to: RCAEARIGVLAS*AHKGSAADTGF
Trigger: GAAGCCTGTGTCTGCAGCGGAGCCTTTGTGGGCCAACGATGCCAGGACTCCAATCCTTGCCTCAGCACACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp GAGGGGCAGGTGCAGATGGCTTTGCCGTTGACAGGGTaGGTGTCACAGTTGGAGCCCTCGTTGCAGGGGTTG +
Preference number: 6 (lower is better)
Translates to: EGQVQMALPLTG*VSQLEPSLQGL
Trigger: CAACCCCTGCAACGAGGGCTCCAACTGTGACACCAACCCTGTCAACGGCAAAGCCATCTGCACCTGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp GTGGGACTACGTGGGCCCGAGATGCATGTACCACCGTaGAGGCAGCGTAAGCTGCCACAAGTGCGGGCATCA +
Preference number: 6 (lower is better)
Translates to: VGLRGPEMHVPP*RQRKLPQVRAS
Trigger: TGATGCCCGCACTTGTGGCAGCTTACGCTGCCTCAACGGTGGTACATGCATCTCGGGCCCACGTAGTCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp TCACAGTGGTACTGCGTGTTGGTCTGCCAGCACCTGCCACCATTCTaGCAGGGAGCCGAGTCGCACCAGCGCACAAGGTTCTGGCAGTTG +
Preference number: 6 (lower is better)
Translates to: SQWYCVLVCQHLPPF*QGAESHQRTRFWQL
Trigger: CAACTGCCAGAACCTTGTGCGCTGGTGCGACTCGGCTCCCTGCAAGAATGGTGGCAGGTGCTGGCAGACCAACACGCAGTACCACTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp AATCCACGGGCGGTGTTGGAGGCCACGGCACAGACACCCCCATTCTaGCAAGGTTTGCCCCTGCAGCCATTGATGACTGACTCACAGCGG +
Preference number: 6 (lower is better)
Translates to: NPRAVLEATAQTPPF*QGLPLQPLMTDSQR
Trigger: CCGCTGTGAGTCAGTCATCAATGGCTGCAGGGGCAAACCTTGCAAGAATGGGGGTGTCTGTGCCGTGGCCTCCAACACCGCCCGTGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp TTGAGGCCGACTGAGTCCTCGCCGAGGGGCTCTCTCCGCTTCTTCTaGCTGGCCTCTGACACTTTGAAACCCTCAGGGAACCAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: LRPTESSPRGSLRFF*LASDTLKPSGNQSW
Trigger: CCAGCTCTGGTTCCCTGAGGGTTTCAAAGTGTCAGAGGCCAGCAAGAAGAAGCGGAGAGAGCCCCTCGGCGAGGACTCAGTCGGCCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp GCGGCCGCCCAATGCAAAGCCGACTTGCCTAGGTCATCCACGGCATaGACGTCAGCATGTGAGTTGATGAGGTCCTCCAGCATGCCCTCC +
Preference number: 6 (lower is better)
Translates to: AAAQCKADLPRSSTA*TSACELMRSSSMPS
Trigger: GGAGGGCATGCTGGAGGACCTCATCAACTCACATGCTGACGTCAATGCCGTGGATGACCTAGGCAAGTCGGCTTTGCATTGGGCGGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp CGTGCCTTGAGGTCCTTAGCTTCCTTGCTACCACAAGCCAGCCCTTaGGTGCTGGGCTTGCGGGCCTTCTTGCCCTGTGTGGCAGACTTG +
Preference number: 6 (lower is better)
Translates to: RALRSLASLLPQASP*VLGLRAFLPCVADL
Trigger: CAAGTCTGCCACACAGGGCAAGAAGGCCCGCAAGCCCAGCACCAAAGGGCTGGCTTGTGGTAGCAAGGAAGCTAAGGACCTCAAGGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 72 bp AAGCTCCGTGGATGCAGGGGTTACTGTTGCACTCGTTaGCCTCGGACAGGCACGTGGGGTCATGGTAGCCCT +
Preference number: 6 (lower is better)
Translates to: KLRGCRGYCCTR*PRTGTWGHGSP
Trigger: AGGGCTACCATGACCCCACGTGCCTGTCCGAGGTCAACGAGTGCAACAGTAACCCCTGCATCCACGGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 72 bp ATTCTTGCAAGGTTTGCCCCTGCAGCCATTGATGACTaGCTCACAGCGGCGTCCAGTGTGGCCAGCCCGGCA +
Preference number: 6 (lower is better)
Translates to: ILARFAPAAIDD*LTAASSVASPA
Trigger: TGCCGGGCTGGCCACACTGGACGCCGCTGTGAGTCAGTCATCAATGGCTGCAGGGGCAAACCTTGCAAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 72 bp TGGGACTACGTGGGCCCGAGATGCATGTACCACCGTTaGGGCAGCGTAAGCTGCCACAAGTGCGGGCATCAT +
Preference number: 6 (lower is better)
Translates to: WDYVGPRCMYHR*GSVSCHKCGHH
Trigger: ATGATGCCCGCACTTGTGGCAGCTTACGCTGCCTCAACGGTGGTACATGCATCTCGGGCCCACGTAGTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 72 bp AGTACTGGTCATACAGGGGGTTGCACTGTCCCTCGGTaGGCTGGCAGTCGAAGCCATCAAAGAGGCAGCCGG +
Preference number: 6 (lower is better)
Translates to: STGHTGGCTVPR*AGSRSHQRGSR
Trigger: CCGGCTGCCTCTTTGATGGCTTCGACTGCCAGCTCACCGAGGGACAGTGCAACCCCCTGTATGACCAGTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp TGGCCTTGCGCATCACGCTTGAAGACCACGTTGGTGTaGAGCACGTGGCTGAGCTCCCGCAGAAAGTGGAAG +
Preference number: 6 (lower is better)
Translates to: WPCASRLKTTLV*STWLSSRRKWK
Trigger: CTTCCACTTTCTGCGGGAGCTCAGCCACGTGCTGCACACCAACGTGGTCTTCAAGCGTGATGCGCAAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp CTGCACCTGCTGGGTCTGCACCAGGTGAGGCTGTGTTaGCAGCCGTGTGTTGGGCAGGCCCTGGTAAATAAT +
Preference number: 6 (lower is better)
Translates to: LHLLGLHQVRLC*QPCVGQALVNN
Trigger: ATTATTTACCAGGGCCTGCCCAACACACGGCTGGCAACACAGCCTCACCTGGTGCAGACCCAGCAGGTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp GGTGTGCTGAGGCAAGGATTGGAGTCCTGGCATCGTTaGCCCACAAAGGCTCCGCTGCAGACACAGGCTTCA +
Preference number: 6 (lower is better)
Translates to: GVLRQGLESWHR*PTKAPLQTQAS
Trigger: TGAAGCCTGTGTCTGCAGCGGAGCCTTTGTGGGCCAACGATGCCAGGACTCCAATCCTTGCCTCAGCACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp CAGCGACAGATGTATGAAGACTCAAAGGGCAGGCACTaGCCACCATTGGCACAGGGGTTGGAGGCACAGGGG +
Preference number: 6 (lower is better)
Translates to: QRQMYEDSKGRH*PPLAQGLEAQG
Trigger: CCCCTGTGCCTCCAACCCCTGTGCCAATGGTGGCCAGTGCCTGCCCTTTGAGTCTTCATACATCTGTCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp TTGGTGTGCAGCACGTGGCTGAGCTCCCGCAGAAAGTaGAAGGAGTTGTTCCGTAGCTGGTCGGGTGGAAGC +
Preference number: 6 (lower is better)
Translates to: LVCSTWLSSRRK*KELFRSWSGGS
Trigger: GCTTCCACCCGACCAGCTACGGAACAACTCCTTCCACTTTCTGCGGGAGCTCAGCCACGTGCTGCACACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp AGAGCACCTAGGAAGGCAGCCACATCGGTGGCACTCTaGAAGCACTGCGAGGATGACTGCACACATTGCCGG +
Preference number: 6 (lower is better)
Translates to: RAPRKAATSVAL*KHCEDDCTHCR
Trigger: CCGGCAATGTGTGCAGTCATCCTCGCAGTGCTTCCAGAGTGCCACCGATGTGGCTGCCTTCCTAGGTGCTCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp CAGTTTGTTCCACTCCACCCAGGGGCACAGTCACACTaGTACCCATTGAGGCCATCCCGGCAAGCTCCGTGG +
Preference number: 6 (lower is better)
Translates to: QFVPLHPGAQSH*YPLRPSRQAPW
Trigger: CCACGGAGCTTGCCGGGATGGCCTCAATGGGTACAAGTGTGACTGTGCCCCTGGGTGGAGTGGAACAAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp GTGCCACGTGGGTCACAGGGGTTGGAGAGACATTCATaGACATCACCCTCACACCGCTCCCCGACGAAGCCT +
Preference number: 6 (lower is better)
Translates to: VPRGSQGLERHS*TSPSHRSPTKP
Trigger: AGGCTTCGTCGGGGAGCGGTGTGAGGGTGATGTCAATGAATGTCTCTCCAACCCCTGTGACCCACGTGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp GAGGCCACGGCACAGACACCCCCATTCTTGCAAGGTTaGCCCCTGCAGCCATTGATGACTGACTCACAGCGG +
Preference number: 6 (lower is better)
Translates to: EATAQTPPFLQG*PLQPLMTDSQR
Trigger: CCGCTGTGAGTCAGTCATCAATGGCTGCAGGGGCAAACCTTGCAAGAATGGGGGTGTCTGTGCCGTGGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp AGCAGTGAAGAGGTGGCCCAACCCACTGTAGAGCGCTaGATTGGGTGCTTGCGCAGCTCTTCCTCGTGGCCA +
Preference number: 6 (lower is better)
Translates to: SSEEVAQPTVER*IGCLRSSSSWP
Trigger: TGGCCACGAGGAAGAGCTGCGCAAGCACCCAATCAAGCGCTCTACAGTGGGTTGGGCCACCTCTTCACTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp CCTAGGTCATCCACGGCATTGACGTCAGCATGTGAGTaGATGAGGTCCTCCAGCATGCCCTCCACGGCCAGG +
Preference number: 6 (lower is better)
Translates to: PRSSTALTSACE*MRSSSMPSTAR
Trigger: CCTGGCCGTGGAGGGCATGCTGGAGGACCTCATCAACTCACATGCTGACGTCAATGCCGTGGATGACCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp AGGGCAGTGCCATGCAGCTGTGGGCTGCGCACCAGGTaGTACTCATCCAAAAGCCGCACGATATCGTGGTGC +
Preference number: 6 (lower is better)
Translates to: RAVPCSCGLRTR*YSSKSRTISWC
Trigger: GCACCACGATATCGTGCGGCTTTTGGATGAGTACAACCTGGTGCGCAGCCCACAGCTGCATGGCACTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp TCCTTGCTACCACAAGCCAGCCCTTTGGTGCTGGGCTaGCGGGCCTTCTTGCCCTGTGTGGCAGACTTGAGA +
Preference number: 6 (lower is better)
Translates to: SLLPQASPLVLG*RAFLPCVADLR
Trigger: TCTCAAGTCTGCCACACAGGGCAAGAAGGCCCGCAAGCCCAGCACCAAAGGGCTGGCTTGTGGTAGCAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp AGGTCCTTAGCTTCCTTGCTACCACAAGCCAGCCCTTaGGTGCTGGGCTTGCGGGCCTTCTTGCCCTGTGTG +
Preference number: 6 (lower is better)
Translates to: RSLASLLPQASP*VLGLRAFLPCV
Trigger: CACACAGGGCAAGAAGGCCCGCAAGCCCAGCACCAAAGGGCTGGCTTGTGGTAGCAAGGAAGCTAAGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp AATGGTGTGCACAGGCAGACTGCTGGGGCCCAGCGGTaGTACATCTGCCTGACTGGGCTCCCCACTCAAGAA +
Preference number: 6 (lower is better)
Translates to: NGVHRQTAGAQR*YICLTGLPTQE
Trigger: TTCTTGAGTGGGGAGCCCAGTCAGGCAGATGTACAACCGCTGGGCCCCAGCAGTCTGCCTGTGCACACCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp TCCTTAGCTTCCTTGCTACCACAAGCCAGCCCTTTGGTGCTGGGCTaGCGGGCCTTCTTGCCCTGTGTGGCAGACTTGAGATTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: SLASLLPQASPLVLG*RAFLPCVADLRLPR
Trigger: CCTGGGCAATCTCAAGTCTGCCACACAGGGCAAGAAGGCCCGCAAGCCCAGCACCAAAGGGCTGGCTTGTGGTAGCAAGGAAGCTAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp ACGTGGCACGTTCCAGCATTCTTACACGGTGTGCTGAGGCAAGGATaGGAGTCCTGGCATCGTTGGCCCACAAAGGCTCCGCTGCAGACA +
Preference number: 6 (lower is better)
Translates to: TWHVPAFLHGVLRQG*ESWHRWPTKAPLQT
Trigger: TGTCTGCAGCGGAGCCTTTGTGGGCCAACGATGCCAGGACTCCAATCCTTGCCTCAGCACACCGTGTAAGAATGCTGGAACGTGCCACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp CAGTTTGTTCCACTCCACCCAGGGGCACAGTCACACTTGTACCCATaGAGGCCATCCCGGCAAGCTCCGTGGATGCAGGGGTTACTGTTG +
Preference number: 6 (lower is better)
Translates to: QFVPLHPGAQSHLYP*RPSRQAPWMQGLLL
Trigger: CAACAGTAACCCCTGCATCCACGGAGCTTGCCGGGATGGCCTCAATGGGTACAAGTGTGACTGTGCCCCTGGGTGGAGTGGAACAAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp TTGATGTCACAGTTTGTTCCACTCCACCCAGGGGCACAGTCACACTaGTACCCATTGAGGCCATCCCGGCAAGCTCCGTGGATGCAGGGG +
Preference number: 6 (lower is better)
Translates to: LMSQFVPLHPGAQSH*YPLRPSRQAPWMQG
Trigger: CCCCTGCATCCACGGAGCTTGCCGGGATGGCCTCAATGGGTACAAGTGTGACTGTGCCCCTGGGTGGAGTGGAACAAACTGTGACATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp TTAACACGCTGCACACAGTTCTGGGTGCCACGTGGGTCACAGGGGTaGGAGAGACATTCATTGACATCACCCTCACACCGCTCCCCGACG +
Preference number: 6 (lower is better)
Translates to: LTRCTQFWVPRGSQG*ERHSLTSPSHRSPT
Trigger: CGTCGGGGAGCGGTGTGAGGGTGATGTCAATGAATGTCTCTCCAACCCCTGTGACCCACGTGGCACCCAGAACTGTGTGCAGCGTGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp CATAGGCAGGTGGGACTACGTGGGCCCGAGATGCATGTACCACCGTaGAGGCAGCGTAAGCTGCCACAAGTGCGGGCATCATTCTCACAT +
Preference number: 6 (lower is better)
Translates to: HRQVGLRGPEMHVPP*RQRKLPQVRASFSH
Trigger: ATGTGAGAATGATGCCCGCACTTGTGGCAGCTTACGCTGCCTCAACGGTGGTACATGCATCTCGGGCCCACGTAGTCCCACCTGCCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp CAGCTCTTCCTCGTGGCCATAGTACGGGAAGATCATCTGCTGGCCTaGCGCATCACGCTTGAAGACCACGTTGGTGTGCAGCACGTGGCT +
Preference number: 6 (lower is better)
Translates to: QLFLVAIVREDHLLA*RITLEDHVGVQHVA
Trigger: AGCCACGTGCTGCACACCAACGTGGTCTTCAAGCGTGATGCGCAAGGCCAGCAGATGATCTTCCCGTACTATGGCCACGAGGAAGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 72 bp ATCTGCACTGGCCTCCAGCAAGCGCTTTGCAGCATCTaGACGAGAGTATCGGGCAGCCAAGTGCAAGGCGGT +
Preference number: 6 (lower is better)
Translates to: ICTGLQQALCSI*TRVSGSQVQGG
Trigger: ACCGCCTTGCACTTGGCTGCCCGATACTCTCGTTCAGATGCTGCAAAGCGCTTGCTGGAGGCCAGTGCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 72 bp CTGCCATCTCAGGCTTGGCTGCCACATTCAAGTGGCTaGTGCCCAGGTGAGTGTCAGGCATACCAGGCAGGT +
Preference number: 6 (lower is better)
Translates to: LPSQAWLPHSSG*CPGECQAYQAG
Trigger: ACCTGCCTGGTATGCCTGACACTCACCTGGGCATCAGCCACTTGAATGTGGCAGCCAAGCCTGAGATGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 72 bp ACACTGAGGTGTGGCTGTGATGGTGGCTGCAGGTTCTaGGGCTGGAGCTGTAAGTTCTGTGGCTGCACCTGC +
Preference number: 6 (lower is better)
Translates to: TLRCGCDGGCRF*GWSCKFCGCTC
Trigger: GCAGGTGCAGCCACAGAACTTACAGCTCCAGCCTCAGAACCTGCAGCCACCATCACAGCCACACCTCAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp AGCGGTAGAAAGGGTTCTCGGATGTGGGCTCACAGGTaGCCTGATTGTAGCAGGGGTTGCTACCCACACAGG +
Preference number: 6 (lower is better)
Translates to: SGRKGSRMWAHR*PDCSRGCYPHR
Trigger: CCTGTGTGGGTAGCAACCCCTGCTACAATCAGGGCACCTGTGAGCCCACATCCGAGAACCCTTTCTACCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp AGGAAGGCAGCCACATCGGTGGCACTCTGGAAGCACTaGGAGGATGACTGCACACATTGCCGGTTGTCGATC +
Preference number: 6 (lower is better)
Translates to: RKAATSVALWKH*EDDCTHCRLSI
Trigger: GATCGACAACCGGCAATGTGTGCAGTCATCCTCGCAGTGCTTCCAGAGTGCCACCGATGTGGCTGCCTTCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp ACAGCAGCATCCACATTGTTCACCGCGGCCGCCCAATaGAAAGCCGACTTGCCTAGGTCATCCACGGCATTG +
Preference number: 6 (lower is better)
Translates to: TAASTLFTAAAQ*KADLPRSSTAL
Trigger: CAATGCCGTGGATGACCTAGGCAAGTCGGCTTTGCATTGGGCGGCCGCGGTGAACAATGTGGATGCTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp CAAAAGCCGCACGATATCGTGGTGCATACGCTCCTGTaGGATGTCCCGCGGCAATCGGTCCATGTGATCCGT +
Preference number: 6 (lower is better)
Translates to: QKPHDIVVHTLL*DVPRQSVHVIR
Trigger: ACGGATCACATGGACCGATTGCCGCGGGACATCGCACAGGAGCGTATGCACCACGATATCGTGCGGCTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp TATTGGTGGAGAGGCTGCTGTGTAGTGGCCCCATCATaGTATGCTGGAGGCCAGCTGCCTGTGTGCTCAGTG +
Preference number: 6 (lower is better)
Translates to: YWWRGCCVVAPS*YAGGQLPVCSV
Trigger: CACTGAGCACACAGGCAGCTGGCCTCCAGCATAGCATGATGGGGCCACTACACAGCAGCCTCTCCACCAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp CACATCCTCTGTACAGTACTGACCCGTCCACTCCGGTaGGCAGCGGCAATTGTAGGTATTCACGCCGTCCAC +
Preference number: 6 (lower is better)
Translates to: HILCTVLTRPLR*AAAIVGIHAVH
Trigger: GTGGACGGCGTGAATACCTACAATTGCCGCTGCCCACCGGAGTGGACGGGTCAGTACTGTACAGAGGATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp CACTTGTACCCATTGAGGCCATCCCGGCAAGCTCCGTaGATGCAGGGGTTACTGTTGCACTCGTTGACCTCG +
Preference number: 6 (lower is better)
Translates to: HLYPLRPSRQAP*MQGLLLHSLTS
Trigger: CGAGGTCAACGAGTGCAACAGTAACCCCTGCATCCACGGAGCTTGCCGGGATGGCCTCAATGGGTACAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp CAGGGCATAGACAGCGGTAGAAAGGGTTCTCGGATGTaGGCTCACAGGTGCCCTGATTGTAGCAGGGGTTGC +
Preference number: 6 (lower is better)
Translates to: QGIDSGRKGSRM*AHRCPDCSRGC
Trigger: GCAACCCCTGCTACAATCAGGGCACCTGTGAGCCCACATCCGAGAACCCTTTCTACCGCTGTCTATGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp CACTGCAGGTTGCAGACCTTATTGCCTGCATCCACCTaGCACTCAGGCAGCTCACAGGCCTCCTCAATCTGC +
Preference number: 6 (lower is better)
Translates to: HCRLQTLLPAST*HSGSSQASSIC
Trigger: GCAGATTGAGGAGGCCTGTGAGCTGCCTGAGTGCCAGGTGGATGCAGGCAATAAGGTCTGCAACCTGCAGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp TCGCAGTGGCCATCACTGAAGTGGTCCTTGCAGTACTaGTCATACAGGGGGTTGCACTGTCCCTCGGTGAGC +
Preference number: 6 (lower is better)
Translates to: SQWPSLKWSLQY*SYRGLHCPSVS
Trigger: GCTCACCGAGGGACAGTGCAACCCCCTGTATGACCAGTACTGCAAGGACCACTTCAGTGATGGCCACTGCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp AGGCCATCCCACTCACATTCGGCACTGTTACAGCCCTaGTCGCAGTGGCCATCACTGAAGTGGTCCTTGCAG +
Preference number: 6 (lower is better)
Translates to: RPSHSHSALLQP*SQWPSLKWSLQ
Trigger: CTGCAAGGACCACTTCAGTGATGGCCACTGCGACCAGGGCTGTAACAGTGCCGAATGTGAGTGGGATGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp CATGATTTTCCTGACCACCCTGGTGGGCAGCGGCACTaGTACTCTGTGAGAGTGAGCAGGTCACAGGTGCCC +
Preference number: 6 (lower is better)
Translates to: HDFPDHPGGQRH*YSVRVSRSQVP
Trigger: GGGCACCTGTGACCTGCTCACTCTCACAGAGTACAAGTGCCGCTGCCCACCAGGGTGGTCAGGAAAATCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp AGAGACTGCGTGCAGTTCTTCCAGGGGTCATTGAAGTaGAGGGAGCAGTCGCCACCATCCCAGCCACATGCG +
Preference number: 6 (lower is better)
Translates to: RDCVQFFQGSLK*REQSPPSQPHA
Trigger: CGCATGTGGCTGGGATGGTGGCGACTGCTCCCTCAACTTCAATGACCCCTGGAAGAACTGCACGCAGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp TACGGGAAGATCATCTGCTGGCCTTGCGCATCACGCTaGAAGACCACGTTGGTGTGCAGCACGTGGCTGAGC +
Preference number: 6 (lower is better)
Translates to: YGKIICWPCASR*KTTLVCSTWLS
Trigger: GCTCAGCCACGTGCTGCACACCAACGTGGTCTTCAAGCGTGATGCGCAAGGCCAGCAGATGATCTTCCCGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp GCTCCGTTCTTCAGGAGCACAACAGCAGCATCCACATaGTTCACCGCGGCCGCCCAATGCAAAGCCGACTTG +
Preference number: 6 (lower is better)
Translates to: APFFRSTTAAST*FTAAAQCKADL
Trigger: CAAGTCGGCTTTGCATTGGGCGGCCGCGGTGAACAATGTGGATGCTGCTGTTGTGCTCCTGAAGAACGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp GGTGCACCCACGGTGAAATTCATAGCCCCCGTGCCATaGGTACTCAGCACTGTGCTGGCACTGGAGGCTACA +
Preference number: 6 (lower is better)
Translates to: GAPTVKFIAPVP*VLSTVLALEAT
Trigger: TGTAGCCTCCAGTGCCAGCACAGTGCTGAGTACCAATGGCACGGGGGCTATGAATTTCACCGTGGGTGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp ATTCTTACACGGTGTGCTGAGGCAAGGATTGGAGTCCTGGCATCGTaGGCCCACAAAGGCTCCGCTGCAGACACAGGCTTCAGTGCCGTT +
Preference number: 6 (lower is better)
Translates to: ILTRCAEARIGVLAS*AHKGSAADTGFSAV
Trigger: AACGGCACTGAAGCCTGTGTCTGCAGCGGAGCCTTTGTGGGCCAACGATGCCAGGACTCCAATCCTTGCCTCAGCACACCGTGTAAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp TGGCCATCACTGAAGTGGTCCTTGCAGTACTGGTCATACAGGGGGTaGCACTGTCCCTCGGTGAGCTGGCAGTCGAAGCCATCAAAGAGG +
Preference number: 6 (lower is better)
Translates to: WPSLKWSLQYWSYRG*HCPSVSWQSKPSKR
Trigger: CCTCTTTGATGGCTTCGACTGCCAGCTCACCGAGGGACAGTGCAACCCCCTGTATGACCAGTACTGCAAGGACCACTTCAGTGATGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp TCCTTGTTGGCTCCGTTCTTCAGGAGCACAACAGCAGCATCCACATaGTTCACCGCGGCCGCCCAATGCAAAGCCGACTTGCCTAGGTCA +
Preference number: 6 (lower is better)
Translates to: SLLAPFFRSTTAAST*FTAAAQCKADLPRS
Trigger: TGACCTAGGCAAGTCGGCTTTGCATTGGGCGGCCGCGGTGAACAATGTGGATGCTGCTGTTGTGCTCCTGAAGAACGGAGCCAACAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 72 bp CAACGTGGCACGTTCCAGCATTCTTACACGGTGTGCTaGGGCAAGGATTGGAGTCCTGGCATCGTTGGCCCA +
Preference number: 6 (lower is better)
Translates to: QRGTFQHSYTVC*GKDWSPGIVGP
Trigger: TGGGCCAACGATGCCAGGACTCCAATCCTTGCCTCAGCACACCGTGTAAGAATGCTGGAACGTGCCACGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 72 bp AGCCACATCGGTGGCACTCTGGAAGCACTGCGAGGATaGCTGCACACATTGCCGGTTGTCGATCTCCAGGTA +
Preference number: 6 (lower is better)
Translates to: SHIGGTLEALRG*LHTLPVVDLQV
Trigger: TACCTGGAGATCGACAACCGGCAATGTGTGCAGTCATCCTCGCAGTGCTTCCAGAGTGCCACCGATGTGGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp AGAAACCCAGGGGACAGCTGCAGGCATAATCCACAGTaGCACCATGGTCCACAACGTGGCACGTTCCAGCAT +
Preference number: 6 (lower is better)
Translates to: RNPGDSCRHNPQ*HHGPQRGTFQH
Trigger: ATGCTGGAACGTGCCACGTTGTGGACCATGGTGGCACTGTGGATTATGCCTGCAGCTGTCCCCTGGGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp GCCCATCCAGGCACTTGGCACCGTTCTTGCATGGTGTaGTGGCACACTCATCCACATCATACTGGCACAGGT +
Preference number: 6 (lower is better)
Translates to: AHPGTWHRSCMV*WHTHPHHTGTG
Trigger: ACCTGTGCCAGTATGATGTGGATGAGTGTGCCAGCACACCATGCAAGAACGGTGCCAAGTGCCTGGATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp TTCTTACACGGTGTGCTGAGGCAAGGATTGGAGTCCTaGCATCGTTGGCCCACAAAGGCTCCGCTGCAGACA +
Preference number: 6 (lower is better)
Translates to: FLHGVLRQGLES*HRWPTKAPLQT
Trigger: TGTCTGCAGCGGAGCCTTTGTGGGCCAACGATGCCAGGACTCCAATCCTTGCCTCAGCACACCGTGTAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp CATCCAGGCACTTGGCACCGTTCTTGCATGGTGTGCTaGCACACTCATCCACATCATACTGGCACAGGTGCC +
Preference number: 6 (lower is better)
Translates to: HPGTWHRSCMVC*HTHPHHTGTGA
Trigger: GGCACCTGTGCCAGTATGATGTGGATGAGTGTGCCAGCACACCATGCAAGAACGGTGCCAAGTGCCTGGATG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp GTTGGGCCCATCCAGGCACTTGGCACCGTTCTTGCATaGTGTGCTGGCACACTCATCCACATCATACTGGCA +
Preference number: 6 (lower is better)
Translates to: VGPIQALGTVLA*CAGTLIHIILA
Trigger: TGCCAGTATGATGTGGATGAGTGTGCCAGCACACCATGCAAGAACGGTGCCAAGTGCCTGGATGGGCCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp ACACGCAGGTATAGGTGTTGGGCCCATCCAGGCACTTaGCACCGTTCTTGCATGGTGTGCTGGCACACTCAT +
Preference number: 6 (lower is better)
Translates to: TRRYRCWAHPGT*HRSCMVCWHTH
Trigger: ATGAGTGTGCCAGCACACCATGCAAGAACGGTGCCAAGTGCCTGGATGGGCCCAACACCTATACCTGCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp AGGCAGGGGTTGGAGGCACATTCGTTGATGTTGGTCTaGCAATTAGGGCCACTGAAGCCTTCTCGGCAGGTG +
Preference number: 6 (lower is better)
Translates to: RQGLEAHSLMLV*QLGPLKPSRQV
Trigger: CACCTGCCGAGAAGGCTTCAGTGGCCCTAATTGCCAGACCAACATCAACGAATGTGCCTCCAACCCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp AAGAGGCAGCCGGCCGAGTTGCACTGGCTGTCACAGTaGCCGTCGCTAAAATACTTCCAGCACTGTAGAGAC +
Preference number: 6 (lower is better)
Translates to: KRQPAELHWLSQ*PSLKYFQHCRD
Trigger: GTCTCTACAGTGCTGGAAGTATTTTAGCGACGGCCACTGTGACAGCCAGTGCAACTCGGCCGGCTGCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp GCATCACGCTTGAAGACCACGTTGGTGTGCAGCACGTaGCTGAGCTCCCGCAGAAAGTGGAAGGAGTTGTTC +
Preference number: 6 (lower is better)
Translates to: ASRLKTTLVCST*LSSRRKWKELF
Trigger: GAACAACTCCTTCCACTTTCTGCGGGAGCTCAGCCACGTGCTGCACACCAACGTGGTCTTCAAGCGTGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp GAGTTGTGCCATCATGCATTCGGGCATCCAGATCTGTaGCCCTGTTCCGGAGCAGGATCTGGAAGACACCCT +
Preference number: 6 (lower is better)
Translates to: ELCHHAFGHPDL*PCSGAGSGRHP
Trigger: AGGGTGTCTTCCAGATCCTGCTCCGGAACAGGGCCACAGATCTGGATGCCCGAATGCATGATGGCACAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp GTTCCAGCATTCTTACACGGTGTGCTGAGGCAAGGATaGGAGTCCTGGCATCGTTGGCCCACAAAGGCTCCG +
Preference number: 6 (lower is better)
Translates to: VPAFLHGVLRQG*ESWHRWPTKAP
Trigger: CGGAGCCTTTGTGGGCCAACGATGCCAGGACTCCAATCCTTGCCTCAGCACACCGTGTAAGAATGCTGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp TGCACACAGTTCTGGGTGCCACGTGGGTCACAGGGGTaGGAGAGACATTCATTGACATCACCCTCACACCGC +
Preference number: 6 (lower is better)
Translates to: CTQFWVPRGSQG*ERHSLTSPSHR
Trigger: GCGGTGTGAGGGTGATGTCAATGAATGTCTCTCCAACCCCTGTGACCCACGTGGCACCCAGAACTGTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp CTCGTGGCCATAGTACGGGAAGATCATCTGCTGGCCTaGCGCATCACGCTTGAAGACCACGTTGGTGTGCAG +
Preference number: 6 (lower is better)
Translates to: LVAIVREDHLLA*RITLEDHVGVQ
Trigger: CTGCACACCAACGTGGTCTTCAAGCGTGATGCGCAAGGCCAGCAGATGATCTTCCCGTACTATGGCCACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp ACATTGTTCACCGCGGCCGCCCAATGCAAAGCCGACTaGCCTAGGTCATCCACGGCATTGACGTCAGCATGT +
Preference number: 6 (lower is better)
Translates to: TLFTAAAQCKAD*PRSSTALTSAC
Trigger: ACATGCTGACGTCAATGCCGTGGATGACCTAGGCAAGTCGGCTTTGCATTGGGCGGCCGCGGTGAACAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp GCACTCAAAAGAACCCAGTGTGTTGAGGCATTTGCCTaGGTGCTCACAAGGGTTGGCACCCAGAGCACACTC +
Preference number: 6 (lower is better)
Translates to: ALKRTQCVEAFA*VLTRVGTQSTL
Trigger: GAGTGTGCTCTGGGTGCCAACCCTTGTGAGCACGCAGGCAAATGCCTCAACACACTGGGTTCTTTTGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp AGGTGTTGGGCCCATCCAGGCACTTGGCACCGTTCTTaGATGGTGTGCTGGCACACTCATCCACATCATACT +
Preference number: 6 (lower is better)
Translates to: RCWAHPGTWHRS*MVCWHTHPHHT
Trigger: AGTATGATGTGGATGAGTGTGCCAGCACACCATGCAAGAACGGTGCCAAGTGCCTGGATGGGCCCAACACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp ATTGATGTTGGTCTCACAGTGATGGCCTGTGTAGCCTaGCTGGCACAGGCAGGTAAAGGTGGCCACACCATC +
Preference number: 6 (lower is better)
Translates to: IDVGLTVMACVA*LAQAGKGGHTI
Trigger: GATGGTGTGGCCACCTTTACCTGCCTGTGCCAGCCAGGCTACACAGGCCATCACTGTGAGACCAACATCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp TGGGGCCAACACCACCTCACACGTGGCTCCTGTATATaGCAGAGGACAGTTGCACTTGTATCCAGCGACATC +
Preference number: 6 (lower is better)
Translates to: WGQHHLTRGSCI*QRTVALVSSDI
Trigger: GATGTCGCTGGATACAAGTGCAACTGTCCTCTGCCATATACAGGAGCCACGTGTGAGGTGGTGTTGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp GCCATTGGTGTTCTGGCAGGAGGCCCCATGGCGACATaGGCTTTTCACACACTCATTGATGTCAACCTCGCA +
Preference number: 6 (lower is better)
Translates to: AIGVLAGGPMAT*AFHTLIDVNLA
Trigger: TGCGAGGTTGACATCAATGAGTGTGTGAAAAGCCCATGTCGCCATGGGGCCTCCTGCCAGAACACCAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp GAGCTCTCAGTACAGTCAGGTGTGTTGTTCTCGCAGTaGATGCCATTGAAGCCCACGGGGCAGGTACATGTG +
Preference number: 6 (lower is better)
Translates to: ELSVQSGVLFSQ*MPLKPTGQVHV
Trigger: CACATGTACCTGCCCCGTGGGCTTCAATGGCATCCACTGCGAGAACAACACACCTGACTGTACTGAGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp TCGCAGTGGAAGTCATTAACACGCTGCACACAGTTCTaGGTGCCACGTGGGTCACAGGGGTTGGAGAGACAT +
Preference number: 6 (lower is better)
Translates to: SQWKSLTRCTQF*VPRGSQGLERH
Trigger: ATGTCTCTCCAACCCCTGTGACCCACGTGGCACCCAGAACTGTGTGCAGCGTGTTAATGACTTCCACTGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp CACTGGCACTCAAAAGAACCCAGTGTGTTGAGGCATTaGCCTGCGTGCTCACAAGGGTTGGCACCCAGAGCA +
Preference number: 6 (lower is better)
Translates to: HWHSKEPSVLRH*PACSQGLAPRA
Trigger: TGCTCTGGGTGCCAACCCTTGTGAGCACGCAGGCAAATGCCTCAACACACTGGGTTCTTTTGAGTGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp CCATTGAAGCAGGAGCTCTCAGTACAGTCAGGTGTGTaGTTCTCGCAGTGGATGCCATTGAAGCCCACGGGG +
Preference number: 6 (lower is better)
Translates to: PLKQELSVQSGV*FSQWMPLKPTG
Trigger: CCCCGTGGGCTTCAATGGCATCCACTGCGAGAACAACACACCTGACTGTACTGAGAGCTCCTGCTTCAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp GCCAACACCACCTCACACGTGGCTCCTGTATATGGCAGAGGACAGTaGCACTTGTATCCAGCGACATCATCAATGCAGGTCCCCTGGTTC +
Preference number: 6 (lower is better)
Translates to: ANTTSHVAPVYGRGQ*HLYPATSSMQVPWF
Trigger: GAACCAGGGGACCTGCATTGATGATGTCGCTGGATACAAGTGCAACTGTCCTCTGCCATATACAGGAGCCACGTGTGAGGTGGTGTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp CAGGTACCACCATTGAAGCAGGAGCTCTCAGTACAGTCAGGTGTGTaGTTCTCGCAGTGGATGCCATTGAAGCCCACGGGGCAGGTACAT +
Preference number: 6 (lower is better)
Translates to: QVPPLKQELSVQSGV*FSQWMPLKPTGQVH
Trigger: ATGTACCTGCCCCGTGGGCTTCAATGGCATCCACTGCGAGAACAACACACCTGACTGTACTGAGAGCTCCTGCTTCAATGGTGGTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 72 bp TACAGTCAGGTGTGTTGTTCTCGCAGTGGATGCCATTaGAGCCCACGGGGCAGGTACATGTGTAGCTGTCCA +
Preference number: 6 (lower is better)
Translates to: YSQVCCSRSGCH*SPRGRYMCSCP
Trigger: TGGACAGCTACACATGTACCTGCCCCGTGGGCTTCAATGGCATCCACTGCGAGAACAACACACCTGACTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp TCAAAAGAACCCAGTGTGTTGAGGCATTTGCCTGCGTaGTCACAAGGGTTGGCACCCAGAGCACACTCATCC +
Preference number: 6 (lower is better)
Translates to: SKEPSVLRHLPA*SQGLAPRAHSS
Trigger: GGATGAGTGTGCTCTGGGTGCCAACCCTTGTGAGCACGCAGGCAAATGCCTCAACACACTGGGTTCTTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp CTGTGTAACCTTCTGTACACACGCAGGTATAGGTGTTaGGCCCATCCAGGCACTTGGCACCGTTCTTGCATG +
Preference number: 6 (lower is better)
Translates to: LCNLLYTRRYRC*AHPGTWHRSCM
Trigger: CATGCAAGAACGGTGCCAAGTGCCTGGATGGGCCCAACACCTATACCTGCGTGTGTACAGAAGGTTACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp CAGGGAGAACTACTGGCTCCTCAAACCGGAACTTCTTaGTCTCCAGGTCTTCGTCTCCCCACTCGTTCTGAT +
Preference number: 6 (lower is better)
Translates to: QGELLAPQTGTS*SPGLRLPTRSD
Trigger: ATCAGAACGAGTGGGGAGACGAAGACCTGGAGACCAAGAAGTTCCGGTTTGAGGAGCCAGTAGTTCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp GTGGTCAGTCTGATCACTCAGGTCAGGGAGAACTACTaGCTCCTCAAACCGGAACTTCTTGGTCTCCAGGTC +
Preference number: 6 (lower is better)
Translates to: VVSLITQVRENY*LLKPELLGLQV
Trigger: GACCTGGAGACCAAGAAGTTCCGGTTTGAGGAGCCAGTAGTTCTCCCTGACCTGAGTGATCAGACTGACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp CAATGCAAAGCCGACTTGCCTAGGTCATCCACGGCATaGACGTCAGCATGTGAGTTGATGAGGTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: QCKADLPRSSTA*TSACELMRSSS
Trigger: GCTGGAGGACCTCATCAACTCACATGCTGACGTCAATGCCGTGGATGACCTAGGCAAGTCGGCTTTGCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 72 bp TTGAGGGAGCAGTCGCCACCATCCCAGCCACATGCGTaGTTATTACACTGCAGGTTGCAGACCTTATTGCCT +
Preference number: 6 (lower is better)
Translates to: LREQSPPSQPHA*LLHCRLQTLLP
Trigger: AGGCAATAAGGTCTGCAACCTGCAGTGTAATAATCACGCATGTGGCTGGGATGGTGGCGACTGCTCCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS TCA 72 bp TTCTTGGTCTCCAGGTCTTCGTCTCCCCACTCGTTCTaGTTGTCGTCCATCAGAGCACCATCTGAGGCATTC +
Preference number: 6 (lower is better)
Translates to: FLVSRSSSPHSF*LSSIRAPSEAF
Trigger: GAATGCCTCAGATGGTGCTCTGATGGACGACAATCAGAACGAGTGGGGAGACGAAGACCTGGAGACCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp ATGCGTGATTATTACACTGCAGGTTGCAGACCTTATTaGCTGCATCCACCTGGCACTCAGGCAGCTCACAGG +
Preference number: 6 (lower is better)
Translates to: MRDYYTAGCRPY*LHPPGTQAAHR
Trigger: CCTGTGAGCTGCCTGAGTGCCAGGTGGATGCAGGCAATAAGGTCTGCAACCTGCAGTGTAATAATCACGCAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp CATCCCAGCCACATGCGTGATTATTACACTGCAGGTTaGAGACCTTATTGCCTGCATCCACCTGGCACTCAG +
Preference number: 6 (lower is better)
Translates to: HPSHMRDYYTAG*RPYCLHPPGTQ
Trigger: CTGAGTGCCAGGTGGATGCAGGCAATAAGGTCTGCAACCTGCAGTGTAATAATCACGCATGTGGCTGGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp GACATCATACTGACAGTAGCTGCCCGTGAAGCCAGGTaGACACAGACAGGTGAAGGAGTTGATACCATCCAC +
Preference number: 6 (lower is better)
Translates to: DIILTVAAREAR*TQTGEGVDTIH
Trigger: GTGGATGGTATCAACTCCTTCACCTGTCTGTGTCCACCTGGCTTCACGGGCAGCTACTGTCAGTATGATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028288.5
ENSMUST00000132820.2
CDS CCA 72 bp GTCATTAACACGCTGCACACAGTTCTGGGTGCCACGTaGGTCACAGGGGTTGGAGAGACATTCATTGACATC +
Preference number: 6 (lower is better)
Translates to: VINTLHTVLGAT*VTGVGETFIDI
Trigger: GATGTCAATGAATGTCTCTCCAACCCCTGTGACCCACGTGGCACCCAGAACTGTGTGCAGCGTGTTAATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp ATGAAGTCAGAGATGACAGCAGGTGCATCTTCTTCTTCTTCACTGTaGCCTGTCTCAAGGCCCCCTCCACTGCAGGAGGCAATCATGAGG +
Preference number: 6 (lower is better)
Translates to: MKSEMTAGASSSSSL*PVSRPPPLQEAIMR
Trigger: CCTCATGATTGCCTCCTGCAGTGGAGGGGGCCTTGAGACAGGCAACAGTGAAGAAGAAGAAGATGCACCTGCTGTCATCTCTGACTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp TGGCCGTCGCTAAAATACTTCCAGCACTGTAGAGACTaGGTGCAGTTCTTCCAGGGGTCATTGAAGTTGAGG +
Preference number: 6 (lower is better)
Translates to: WPSLKYFQHCRD*VQFFQGSLKLR
Trigger: CCTCAACTTCAATGACCCCTGGAAGAACTGCACGCAGTCTCTACAGTGCTGGAAGTATTTTAGCGACGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp GCGACATGGGCTTTTCACACACTCATTGATGTCAACCTCGCAGGTTaGACCTTGCCAGCCTGTGGGACAGACACAGGAAAAACTCTCATA +
Preference number: 6 (lower is better)
Translates to: ATWAFHTLIDVNLAG*TLPACGTDTGKTLI
Trigger: TATGAGAGTTTTTCCTGTGTCTGTCCCACAGGCTGGCAAGGTCAAACCTGCGAGGTTGACATCAATGAGTGTGTGAAAAGCCCATGTCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp GTCCACACAGGCACCCCCATTCTTGCAGTTGTTTCCTaGACAGTCATCCACATTTTCTTCACAGTTCTGTCC +
Preference number: 6 (lower is better)
Translates to: VHTGTPILAVVS*TVIHIFFTVLS
Trigger: GGACAGAACTGTGAAGAAAATGTGGATGACTGTCCAGGAAACAACTGCAAGAATGGGGGTGCCTGTGTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp CACAAGGTTCTGGCAGTTGAGACCAGTGTAGCCCTGTaGGCAGGTACACTTATAAGTACCATAGCTGTCTTG +
Preference number: 6 (lower is better)
Translates to: HKVLAVETSVAL*AGTLISTIAVL
Trigger: CAAGACAGCTATGGTACTTATAAGTGTACCTGCCCACAGGGCTACACTGGTCTCAACTGCCAGAACCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028288.5
ENSMUST00000132820.2
CDS CAA 72 bp GCTTTTCACACACTCATTGATGTCAACCTCGCAGGTTaGACCTTGCCAGCCTGTGGGACAGACACAGGAAAA +
Preference number: 6 (lower is better)
Translates to: AFHTLIDVNLAG*TLPACGTDTGK
Trigger: TTTTCCTGTGTCTGTCCCACAGGCTGGCAAGGTCAAACCTGCGAGGTTGACATCAATGAGTGTGTGAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp TGGGCTTTTCACACACTCATTGATGTCAACCTCGCAGGTTTGACCTaGCCAGCCTGTGGGACAGACACAGGAAAAACTCTCATAGTCTTC +
Preference number: 6 (lower is better)
Translates to: WAFHTLIDVNLAGLT*PACGTDTGKTLIVF
Trigger: GAAGACTATGAGAGTTTTTCCTGTGTCTGTCCCACAGGCTGGCAAGGTCAAACCTGCGAGGTTGACATCAATGAGTGTGTGAAAAGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp AGGTACATGTGTAGCTGTCCACACAGTCAGTGCAATTaGCACCATTTTGGCAGGGATTGCTGGCACATTCAT +
Preference number: 6 (lower is better)
Translates to: RYMCSCPHSQCN*HHFGRDCWHIH
Trigger: ATGAATGTGCCAGCAATCCCTGCCAAAATGGTGCCAATTGCACTGACTGTGTGGACAGCTACACATGTACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 90 bp CACAGACAGGTGAAGGAGTTGATACCATCCACACAGGTACCACCATaGAAGCAGGAGATTGCTCCATCCTCCATTTGTTGGTCAGTGTAT +
Preference number: 6 (lower is better)
Translates to: HRQVKELIPSTQVPP*KQEIAPSSICWSVY
Trigger: ATACACTGACCAACAAATGGAGGATGGAGCAATCTCCTGCTTCAATGGTGGTACCTGTGTGGATGGTATCAACTCCTTCACCTGTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132820.2
CDS TCA 72 bp AACTCCCCAATCTGGTCCAGGCAAGTGGCATCATTCTaGCATGGGTTGGAGATGCACTCATTAACATCAATC +
Preference number: 6 (lower is better)
Translates to: NSPIWSRQVASF*HGLEMHSLTSI
Trigger: GATTGATGTTAATGAGTGCATCTCCAACCCATGTCAGAATGATGCCACTTGCCTGGACCAGATTGGGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CAA 72 bp ACAGTATACACCTTCATAACCTGGCATACATATGCATaGGAACTCCCCAATCTGGTCCAGGCAAGTGGCATC +
Preference number: 6 (lower is better)
Translates to: TVYTFITWHTYA*ELPNLVQASGI
Trigger: GATGCCACTTGCCTGGACCAGATTGGGGAGTTCCAATGCATATGTATGCCAGGTTATGAAGGTGTATACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS GCA 72 bp TTTCACAGTATACACCTTCATAACCTGGCATACATATaGATTGGAACTCCCCAATCTGGTCCAGGCAAGTGG +
Preference number: 6 (lower is better)
Translates to: FHSIHLHNLAYI*IGTPQSGPGKW
Trigger: CCACTTGCCTGGACCAGATTGGGGAGTTCCAATGCATATGTATGCCAGGTTATGAAGGTGTATACTGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5
CDS CCA 72 bp ATCCGTGTTGATTTCACAGTATACACCTTCATAACCTaGCATACATATGCATTGGAACTCCCCAATCTGGTC +
Preference number: 6 (lower is better)
Translates to: IRVDFTVYTFIT*HTYALELPNLV
Trigger: GACCAGATTGGGGAGTTCCAATGCATATGTATGCCAGGTTATGAAGGTGTATACTGTGAAATCAACACGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028288.5