Pregenerated sensors for NOSTRIN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034738Ensembl transcript IDs: ENSMUST00000041865.8
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATAAGATTGTTTACAGAATGTaGAAAGGCCATTCTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: PCTEHCEMQAGLYHPLHKIVYRM*KGHSVC Trigger: ACACACAGAATGGCCTTTGCACATTCTGTAAACAAT...CTTATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| 3UTR GCA 72 bp | TTGAAGTTAATAACCCATGTACAGAGCACTGTGAAATaGAGGCAGGCCTCTACCACCCACTGCATAAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: LKLITHVQSTVK*RQASTTHCIRK Trigger: TTTTCTTATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGGGTTATTAACTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR CCA 90 bp | AACCCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATGGGATGGCAGGGCTTTaGCCGTTGCTCCAGGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: NPCTEHCEMQAGLYHPLHGMAGL*PLLQVC Trigger: GCAGACCTGGAGCAACGGCCAAAGCCCTGCCATCCC...ATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR TCA 90 bp | AACCCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATAGACTTCATGCTCTCTaGGGCCCAGGCCCAAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: NPCTEHCEMQAGLYHPLHRLHAL*GPGPSS Trigger: ACTGCTTGGGCCTGGGCCTCAGAGAGCATGAAGTCT...ATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR CCA 90 bp | GTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATAAGAAAACAGGTGCTACAGGGATaGCAGGGCTTTGGCCGTTGC | + |
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Preference number: 4 (lower is better) Translates to: VQSTVKCRQASTTHCIRKQVLQG*QGFGRC Trigger: GCAACGGCCAAAGCCCTGCCATCCCTGTAGCACCTG...TTTTCTTATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR TCA 90 bp | AACCCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATAGGCCCAAGCAGTGCTaGGACAGTTTTTCTTTGTGC | + |
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Preference number: 4 (lower is better) Translates to: NPCTEHCEMQAGLYHPLHRPKQC*DSFSLC Trigger: GCACAAAGAAAAACTGTCTCAGCACTGCTTGGGCCT...ATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR CCA 90 bp | CCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATAAGTTCTGCTTCTCCTTCTaGGTCAGGGATTGCTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: PCTEHCEMQAGLYHPLHKFCFSF*VRDCLE Trigger: CTCCAAGCAATCCCTGACCCAGAAGGAGAAGCAGAA...CTTATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR CCA 90 bp | CCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATAAGCAGTGGATCTGTGTGTaGCATGTGGTCAGCGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PCTEHCEMQAGLYHPLHKQWICV*HVVSVC Trigger: ACAAACGCTGACCACATGCCACACACAGATCCACTG...CTTATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR GCA 90 bp | AGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATAAGAAAAATCTGCAGCAGTTTTCCAGGGTaGTTTCCCACTTCAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: STVKCRQASTTHCIRKICSSFPG*FPTSAW Trigger: CCAGGCTGAAGTGGGAAAGCACCCTGGAAAACTGCT...GCAGATTTTTCTTATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR TCA 90 bp | AGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATAAGAAAAATCTGCGCTTTGCCAAGTTTTTaGTGGAGGTCTGCTGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: STVKCRQASTTHCIRKICALPSF*WRSAAD Trigger: GTCTGCAGCAGACCTCCATCAAAAACTTGGCAAAGC...GCAGATTTTTCTTATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR TCA 90 bp | TTAATAACCCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACCAACATCAACCTTGCTaGTGGCACAGTGGATCTGTG | + |
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Preference number: 4 (lower is better) Translates to: LITHVQSTVKCRQASTTHQHQPC*WHSGSV Trigger: CACAGATCCACTGTGCCATCAGCAAGGTTGATGTTG...GTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGGGTTATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR TCA 90 bp | GTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATAAGAAAACAGGTCTGCCAACACTaGCGACAGTTTGTAGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VQSTVKCRQASTTHCIRKQVCQH*RQFVGV Trigger: AACTCCTACAAACTGTCGTCAGTGTTGGCAGACCTG...TTTTCTTATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR TCA 90 bp | CCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATAAGCCTTTTCTTTCCACTTaGAAATGCAGGTGCTACAGG | + |
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Preference number: 4 (lower is better) Translates to: PCTEHCEMQAGLYHPLHKPFLST*KCRCYR Trigger: CCTGTAGCACCTGCATTTTCAAGTGGAAAGAAAAGG...CTTATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR GCA 90 bp | AACCCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATTTTTTGATGGAGGTCTaGTGCAGACTTCATGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: NPCTEHCEMQAGLYHPLHFLMEV*CRLHAL Trigger: GAGAGCATGAAGTCTGCAGCAGACCTCCATCAAAAA...ATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGGGTT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR TCA 90 bp | GAAGTTAATAACCCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACAGGTTGGCCCTTTGCTaGAGAACAGATGTGATCTGC | + |
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Preference number: 4 (lower is better) Translates to: EVNNPCTEHCEMQAGLYHRLALC*RTDVIC Trigger: GCAGATCACATCTGTTCTTCAGCAAAGGGCCAACCT...GTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGGGTTATTAACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR GCA 90 bp | TGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATAAGAAATTCTGGGTCAGGGATTaGTTGGAGCTTTCTACAAGG | + |
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Preference number: 4 (lower is better) Translates to: CTEHCEMQAGLYHPLHKKFWVRD*LELSTR Trigger: CCTTGTAGAAAGCTCCAAGCAATCCCTGACCCAGAA...TTTCTTATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR GCA 90 bp | AAGTTAATAACCCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACCCGCAGGTGCTTTaGTCTCAGCTTTCTCTAATC | + |
|
Preference number: 4 (lower is better) Translates to: KLITHVQSTVKCRQASTTHPQVL*SQLSLI Trigger: GATTAGAGAAAGCTGAGAGCAAAGCACCTGCGGGTG...GGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGGGTTATTAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR GCA 90 bp | AACCCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATCCAACTCAATTGCTTTaGCAAGTTTTTGATGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: NPCTEHCEMQAGLYHPLHPTQLL*QVFDGG Trigger: ACCTCCATCAAAAACTTGGCAAAGCAATTGAGTTGG...ATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR GCA 90 bp | AACCCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATTTTTCAATGTCTCTTTaGAGTCTCCCCAATTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: NPCTEHCEMQAGLYHPLHFSMSL*SLPNLG Trigger: ACCCAAATTGGGGAGACTGCAAAGAGACATTGAAAA...ATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR GCA 90 bp | TCACATTGTTTACAGAATGTGCAAAGGCCATTCTGTGTGTCCATCCATTCTTGTCTGCCCACCCGCAGGTaGTTTGCTCTCAGCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SHCLQNVQRPFCVSIHSCLPTRR*FALSFL Trigger: GAGAAAGCTGAGAGCAAAGCACCTGCGGGTGGGCAG...ACAAGAATGGATGGACACACAGAATGGCCTTTGCACATTCTGTAAACAATGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR GCA 90 bp | CCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATAAGTTCAACTCATCATCTTaGCTGGCTTGGAACGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: PCTEHCEMQAGLYHPLHKFNSSS*LAWNVY Trigger: ATATACGTTCCAAGCCAGGCAAGATGATGAGTTGAA...CTTATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR TCA 90 bp | GTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATAAGAAAAGCTGAAGAACAGATGTaGTCTGCTTGCAGAAATTGT | + |
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Preference number: 4 (lower is better) Translates to: VQSTVKCRQASTTHCIRKAEEQM*SACRNC Trigger: ACAATTTCTGCAAGCAGATCACATCTGTTCTTCAGC...TTTTCTTATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR GCA 90 bp | AACCCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATTGGAAAAGTGCTTCATaGTTCTTGGTACTCATCATT | + |
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Preference number: 4 (lower is better) Translates to: NPCTEHCEMQAGLYHPLHWKSAS*FLVLII Trigger: AATGATGAGTACCAAGAAGCATGAAGCACTTTTCCA...ATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR CCA 90 bp | TTTGAAGTTAATAACCCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACAGATGCTTGCTGGCTTaGGACACAGTAGAGCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: FEVNNPCTEHCEMQAGLYRCLLA*DTVEPE Trigger: TTCAGGCTCTACTGTGTCCCAAGCCAGCAAGCATCT...GTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGGGTTATTAACTTCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR CCA 90 bp | GTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATAAGAAAATCATCTTGCCTGGCTTaGAACGTATATAAGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: VQSTVKCRQASTTHCIRKSSCLA*NVYKAL Trigger: CAAAGCCTTATATACGTTCCAAGCCAGGCAAGATGA...TTTTCTTATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR CCA 90 bp | AGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATAAGAAAAATCTGCACTCATCATCTTGCCTaGCTTGGAACGTATATAAGG | + |
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Preference number: 4 (lower is better) Translates to: STVKCRQASTTHCIRKICTHHLA*LGTYIR Trigger: CCTTATATACGTTCCAAGCCAGGCAAGATGATGAGT...GCAGATTTTTCTTATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR CCA 90 bp | AAGTTAATAACCCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCTCTTCTTTCTTCTCATaGACGGTCACGATGTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: KLITHVQSTVKCRQASTTSSFFS*TVTMSP Trigger: AGGAGACATCGTGACCGTCCATGAGAAGAAAGAAGA...GGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGGGTTATTAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR CCA 90 bp | AAGTTAATAACCCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCAAATTGTCTCCATGTTaGGCAAACTCTTTCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: KLITHVQSTVKCRQASTTKLSPC*ANSFRL Trigger: GAGCCTGAAAGAGTTTGCCCAACATGGAGACAATTT...GGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGGGTTATTAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR GCA 90 bp | TTTGCATCACATTGTTTACAGAATGTGCAAAGGCCATTCTGTGTGTCCATCCATAAGGCTTTGCAAAGATaGTTGCTGGCTTGGGACACA | + |
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Preference number: 4 (lower is better) Translates to: FASHCLQNVQRPFCVSIHKALQR*LLAWDT Trigger: TGTGTCCCAAGCCAGCAAGCATCTTTGCAAAGCCTT...ATGGATGGACACACAGAATGGCCTTTGCACATTCTGTAAACAATGTGATGCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR CCA 90 bp | CATCACATTGTTTACAGAATGTGCAAAGGCCATTCTGTGTGTCCATCCATTCTTGAGCTTTCTACAAGGTaGAAAAGTGCTTCATGCTTC | + |
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Preference number: 4 (lower is better) Translates to: HHIVYRMCKGHSVCPSILELSTR*KSASCF Trigger: GAAGCATGAAGCACTTTTCCACCTTGTAGAAAGCTC...AAGAATGGATGGACACACAGAATGGCCTTTGCACATTCTGTAAACAATGTGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR CCA 90 bp | TTTGCATCACATTGTTTACAGAATGTGCAAAGGCCATTCTGTGTGTCCATCCATTCGCTCTTTGTCCATTaGGTTCTTTGGATCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: FASHCLQNVQRPFCVSIHSLFVH*VLWIFF Trigger: GAAGAAGATCCAAAGAACCCAATGGACAAAGAGCGA...ATGGATGGACACACAGAATGGCCTTTGCACATTCTGTAAACAATGTGATGCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR GCA 90 bp | TCACATTGTTTACAGAATGTGCAAAGGCCATTCTGTGTGTCCATCCATTCTTGTCGCTTCCAACTCAATTaGTTTGCCAAGTTTTTGATG | + |
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Preference number: 4 (lower is better) Translates to: SHCLQNVQRPFCVSIHSCRFQLN*FAKFLM Trigger: CATCAAAAACTTGGCAAAGCAATTGAGTTGGAAGCG...ACAAGAATGGATGGACACACAGAATGGCCTTTGCACATTCTGTAAACAATGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR CCA 90 bp | TTTGCATCACATTGTTTACAGAATGTGCAAAGGCCATTCTGTGTGTCCATCCATGCAGTCTCCCCAATTTaGGTTTTAATAAAGACTTCC | + |
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Preference number: 4 (lower is better) Translates to: FASHCLQNVQRPFCVSIHAVSPI*VLIKTS Trigger: GGAAGTCTTTATTAAAACCCAAATTGGGGAGACTGC...ATGGATGGACACACAGAATGGCCTTTGCACATTCTGTAAACAATGTGATGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR CAA 90 bp | CCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATAAGCCACCCGCAGGTGCTTaGCTCTCAGCTTTCTCTAAT | + |
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Preference number: 5 (lower is better) Translates to: PCTEHCEMQAGLYHPLHKPPAGA*LSAFSN Trigger: ATTAGAGAAAGCTGAGAGCAAAGCACCTGCGGGTGG...CTTATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS GCA 90 bp | GCTTGGGACACAGTAGAGCCTGAAGGTGAAGAGCTTGGATTGTTCTaGCCACCCGCAGGTGCTTTGCTCTCAGCTTTCTCTAATCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: AWDTVEPEGEELGLF*PPAGALLSAFSNLF Trigger: GAAGAGATTAGAGAAAGCTGAGAGCAAAGCACCTGCGGGTGGGCAGAACAATCCAAGCTCTTCACCTTCAGGCTCTACTGTGTCCCAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR CAA 90 bp | AACCCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATCTCCAGGTTGGCCCTTaGCTGAAGAACAGATGTGAT | + |
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Preference number: 5 (lower is better) Translates to: NPCTEHCEMQAGLYHPLHLQVGP*LKNRCD Trigger: ATCACATCTGTTCTTCAGCAAAGGGCCAACCTGGAG...ATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR CAA 90 bp | TGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATAAGAAACTGAAGGTGAAGAGCTaGGATTGTTCTGCCCACCCG | + |
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Preference number: 5 (lower is better) Translates to: CTEHCEMQAGLYHPLHKKLKVKS*DCSAHP Trigger: CGGGTGGGCAGAACAATCCAAGCTCTTCACCTTCAG...TTTCTTATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR CAA 90 bp | CCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATAAGCTTTCTCTTCTTCTCTaGCATACTCAGGACCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: PCTEHCEMQAGLYHPLHKLSLLL*HTQDLV Trigger: CACCAGGTCCTGAGTATGCAAGAGAAGAAGAGAAAG...CTTATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR CAA 90 bp | GAAGTTAATAACCCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACTGGGTCAGGGATTGCTaGGAGCTTTCTACAAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: EVNNPCTEHCEMQAGLYHWVRDC*ELSTRW Trigger: CCACCTTGTAGAAAGCTCCAAGCAATCCCTGACCCA...GTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGGGTTATTAACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR CAA 90 bp | TTAATAACCCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACCTTCTGGGTCAGGGATaGCTTGGAGCTTTCTACAAG | + |
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Preference number: 5 (lower is better) Translates to: LITHVQSTVKCRQASTTHLLGQG*LGAFYK Trigger: CTTGTAGAAAGCTCCAAGCAATCCCTGACCCAGAAG...GTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGGGTTATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR CAA 90 bp | CCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATAAGGTCGCTCTTTGTCCATaGGGTTCTTTGGATCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: PCTEHCEMQAGLYHPLHKVALCP*GSLDLL Trigger: AAGAAGATCCAAAGAACCCAATGGACAAAGAGCGAC...CTTATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS CCA 90 bp | CTGGCTTGGAACGTATATAAGGCTTTGCAAAGATGCTTGCTGGCTTaGGACACAGTAGAGCCTGAAGGTGAAGAGCTTGGATTGTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: LAWNVYKALQRCLLA*DTVEPEGEELGLFC Trigger: GCAGAACAATCCAAGCTCTTCACCTTCAGGCTCTACTGTGTCCCAAGCCAGCAAGCATCTTTGCAAAGCCTTATATACGTTCCAAGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR CAA 90 bp | CCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATAAGGCATGTGGTCAGCGTTaGTCCAAAAAGAGAAATATG | + |
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Preference number: 5 (lower is better) Translates to: PCTEHCEMQAGLYHPLHKACGQR*SKKRNM Trigger: CATATTTCTCTTTTTGGACAAACGCTGACCACATGC...CTTATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR CAA 90 bp | GAAGTTAATAACCCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCGCTCCAAGCCTTCTTaGTCTCTTGAGGCCTTTTCA | + |
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Preference number: 5 (lower is better) Translates to: EVNNPCTEHCEMQAGLYHRSKPS*SLEAFS Trigger: TGAAAAGGCCTCAAGAGACAAAGAAGGCTTGGAGCG...GTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGGGTTATTAACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR CAA 90 bp | TTGAAGTTAATAACCCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCCTGTGTTTCCAGCCTTaGGAGGTAGCTCCTCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: LKLITHVQSTVKCRQASTLCFQP*EVAPPH Trigger: ATGTGGAGGAGCTACCTCCAAAGGCTGGAAACACAG...GGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGGGTTATTAACTTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS-3UTR CAA 90 bp | TTAATAACCCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACATCTGCTTGCAGAAATaGTCTCCATGTTGGGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LITHVQSTVKCRQASTTHICLQK*SPCWAN Trigger: GTTTGCCCAACATGGAGACAATTTCTGCAAGCAGAT...GTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGGGTTATTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS-3UTR CAA 90 bp | CATCACATTGTTTACAGAATGTGCAAAGGCCATTCTGTGTGTCCATCCATTCTTGTGCTCTGTAGTGCTTaGCTGAGCCTGACGGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: HHIVYRMCKGHSVCPSILVLCSA*LSLTAS Trigger: ACTGGCCGTCAGGCTCAGCAAAGCACTACAGAGCAC...AAGAATGGATGGACACACAGAATGGCCTTTGCACATTCTGTAAACAATGTGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS-3UTR CAA 90 bp | TCACATTGTTTACAGAATGTGCAAAGGCCATTCTGTGTGTCCATCCATTCTTGTGGTGAAGAGCTTGGATaGTTCTGCCCACCCGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SHCLQNVQRPFCVSIHSCGEELG*FCPPAG Trigger: ACCTGCGGGTGGGCAGAACAATCCAAGCTCTTCACC...ACAAGAATGGATGGACACACAGAATGGCCTTTGCACATTCTGTAAACAATGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS TCA 90 bp | GGGATATTTTCACATAAGTATGAGAGTGCTCCTTTTCTTTCCACTTaGAAATGCAGGTGCTACAGGGATGGCAGGGCTTTGGCCGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GIFSHKYESAPFLST*KCRCYRDGRALAVA Trigger: AGCAACGGCCAAAGCCCTGCCATCCCTGTAGCACCTGCATTTTCAAGTGGAAAGAAAAGGAGCACTCTCATACTTATGTGAAAATATCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS GCA 90 bp | CATACTCAGGACCTGGTGTGTTGGCTTTATCGCTTCCAACTCAATTaGTTTGCCAAGTTTTTGATGGAGGTCTGCTGCAGACTTCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: HTQDLVCWLYRFQLN*FAKFLMEVCCRLHA Trigger: AGCATGAAGTCTGCAGCAGACCTCCATCAAAAACTTGGCAAAGCAATTGAGTTGGAAGCGATAAAGCCAACACACCAGGTCCTGAGTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS GCA 90 bp | TTCAGTTTGTTGAGGAGCTTCTGCTTCTCCTTCTGGGTCAGGGATTaGTTGGAGCTTTCTACAAGGTGGAAAAGTGCTTCATGCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FSLLRSFCFSFWVRD*LELSTRWKSASCFL Trigger: CAAGAAGCATGAAGCACTTTTCCACCTTGTAGAAAGCTCCAAGCAATCCCTGACCCAGAAGGAGAAGCAGAAGCTCCTCAACAAACTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS-3UTR CAA 90 bp | GAAGTTAATAACCCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCTTTTCAATGTCTCTTaGCAGTCTCCCCAATTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: EVNNPCTEHCEMQAGLYHLFNVS*QSPQFG Trigger: CCCAAATTGGGGAGACTGCAAAGAGACATTGAAAAG...GTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGGGTTATTAACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS-3UTR CAA 90 bp | AGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATAAGAAAAATCTGCAACGTATATAAGGCTTaGCAAAGATGCTTGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: STVKCRQASTTHCIRKICNVYKA*QRCLLA Trigger: AGCCAGCAAGCATCTTTGCAAAGCCTTATATACGTT...GCAGATTTTTCTTATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS-3UTR CAA 90 bp | AGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATAAGAAAAATCTGCATTCAACTCATCATCTaGCCTGGCTTGGAACGTATA | + |
|
Preference number: 5 (lower is better) Translates to: STVKCRQASTTHCIRKICIQLII*PGLERI Trigger: TATACGTTCCAAGCCAGGCAAGATGATGAGTTGAAT...GCAGATTTTTCTTATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS TCA 90 bp | TTTCTTCCATTAGAGCCTGGATATCTTTTTCAACATCAACCTTGCTaGTGGCACAGTGGATCTGTGTGTGGCATGTGGTCAGCGTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: FLPLEPGYLFQHQPC*WHSGSVCGMWSAFV Trigger: GACAAACGCTGACCACATGCCACACACAGATCCACTGTGCCATCAGCAAGGTTGATGTTGAAAAAGATATCCAGGCTCTAATGGAAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS GCA 90 bp | AGTTATTGCATAAAAGTTGAATTCTTTCCTTCTCCAGCTCCAGCATaGTCTTGTAGCAGTTTTCCAGGGTGCTTTCCCACTTCAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SYCIKVEFFPSPAPA*SCSSFPGCFPTSAW Trigger: CCAGGCTGAAGTGGGAAAGCACCCTGGAAAACTGCTACAAGAGCATGCTGGAGCTGGAGAAGGAAAGAATTCAACTTTTATGCAATAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS-3UTR CAA 90 bp | AGCACTGTGAAATGCAGGCAGGCCTCTACCACCCACTGCATAAGAAAAATCTGCTGCAGTCTCCCCAATTaGGGTTTTAATAAAGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: STVKCRQASTTHCIRKICCSLPN*GFNKDF Trigger: GAAGTCTTTATTAAAACCCAAATTGGGGAGACTGCA...GCAGATTTTTCTTATGCAGTGGGTGGTAGAGGCCTGCCTGCATTTCACAGTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS-3UTR CAA 90 bp | TTGAAGTTAATAACCCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCAGCCTTCTTTGTCTCTaGAGGCCTTTTCAATGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LKLITHVQSTVKCRQASTSLLCL*RPFQCL Trigger: GAGACATTGAAAAGGCCTCAAGAGACAAAGAAGGCT...GGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGGGTTATTAACTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS-3UTR CAA 90 bp | AAGTTAATAACCCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCACCTCCTTTTCTTTCCACTaGAAAATGCAGGTGCTACAG | + |
|
Preference number: 5 (lower is better) Translates to: KLITHVQSTVKCRQASTTSFSFH*KMQVLQ Trigger: CTGTAGCACCTGCATTTTCAAGTGGAAAGAAAAGGA...GGTGGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGGGTTATTAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS GCA 90 bp | TGGACGGTCACGATGTCTCCTTTTTCCAAATTCAACTCATCATCTTaGCTGGCTTGGAACGTATATAAGGCTTTGCAAAGATGCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WTVTMSPFSKFNSSS*LAWNVYKALQRCLL Trigger: CAGCAAGCATCTTTGCAAAGCCTTATATACGTTCCAAGCCAGGCAAGATGATGAGTTGAATTTGGAAAAAGGAGACATCGTGACCGTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS CCA 90 bp | ACGATGTCTCCTTTTTCCAAATTCAACTCATCATCTTGCCTGGCTTaGAACGTATATAAGGCTTTGCAAAGATGCTTGCTGGCTTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TMSPFSKFNSSSCLA*NVYKALQRCLLAWD Trigger: GTCCCAAGCCAGCAAGCATCTTTGCAAAGCCTTATATACGTTCCAAGCCAGGCAAGATGATGAGTTGAATTTGGAAAAAGGAGACATCGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS CCA 90 bp | CGGTCACGATGTCTCCTTTTTCCAAATTCAACTCATCATCTTGCCTaGCTTGGAACGTATATAAGGCTTTGCAAAGATGCTTGCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RSRCLLFPNSTHHLA*LGTYIRLCKDACWL Trigger: AAGCCAGCAAGCATCTTTGCAAAGCCTTATATACGTTCCAAGCCAGGCAAGATGATGAGTTGAATTTGGAAAAAGGAGACATCGTGACCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS-3UTR CAA 90 bp | CATCACATTGTTTACAGAATGTGCAAAGGCCATTCTGTGTGTCCATCCATTCTTGACTTCCGTCGCTCTTaGTCCATTGGGTTCTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: HHIVYRMCKGHSVCPSILDFRRS*SIGFFG Trigger: TCCAAAGAACCCAATGGACAAAGAGCGACGGAAGTC...AAGAATGGATGGACACACAGAATGGCCTTTGCACATTCTGTAAACAATGTGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS-3UTR CAA 90 bp | CATCACATTGTTTACAGAATGTGCAAAGGCCATTCTGTGTGTCCATCCATTCTTGCTTTGCAAAGATGCTaGCTGGCTTGGGACACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: HHIVYRMCKGHSVCPSILALQRC*LAWDTV Trigger: TACTGTGTCCCAAGCCAGCAAGCATCTTTGCAAAGC...AAGAATGGATGGACACACAGAATGGCCTTTGCACATTCTGTAAACAATGTGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS CCA 90 bp | AAGCGACTTTCTCTTCTTCTCTTGCATACTCAGGACCTGGTGTGTTaGCTTTATCGCTTCCAACTCAATTGCTTTGCCAAGTTTTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: KRLSLLLLHTQDLVC*LYRFQLNCFAKFLM Trigger: CATCAAAAACTTGGCAAAGCAATTGAGTTGGAAGCGATAAAGCCAACACACCAGGTCCTGAGTATGCAAGAGAAGAAGAGAAAGTCGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS CCA 90 bp | TCATTATCAAGCGACTTTCTCTTCTTCTCTTGCATACTCAGGACCTaGTGTGTTGGCTTTATCGCTTCCAACTCAATTGCTTTGCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SLSSDFLFFSCILRT*CVGFIASNSIALPS Trigger: ACTTGGCAAAGCAATTGAGTTGGAAGCGATAAAGCCAACACACCAGGTCCTGAGTATGCAAGAGAAGAAGAGAAAGTCGCTTGATAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS-3UTR CAA 90 bp | TTGAAGTTAATAACCCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACCTCGCTTCCAACTCAATaGCTTTGCCAAGTTTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LKLITHVQSTVKCRQASTSLPTQ*LCQVFD Trigger: ATCAAAAACTTGGCAAAGCAATTGAGTTGGAAGCGA...GGTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGGGTTATTAACTTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS-3UTR CAA 90 bp | CATCACATTGTTTACAGAATGTGCAAAGGCCATTCTGTGTGTCCATCCATTCTTTTTTCAACATCAACCTaGCTGATGGCACAGTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: HHIVYRMCKGHSVCPSILFSTST*LMAQWI Trigger: GATCCACTGTGCCATCAGCAAGGTTGATGTTGAAAA...AAGAATGGATGGACACACAGAATGGCCTTTGCACATTCTGTAAACAATGTGATG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR CAA 90 bp | TTTGAAGTTAATAACCCATGTACAGAGCACTGTGAAATGCAGGCAGGCCTCTACAGGAGAAGCTCCGATTaGTTTTCTATAGACAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: FEVNNPCTEHCEMQAGLYRRSSD*FSIDRI Trigger: AATCCTGTCTATAGAAAACAAATCGGAGCTTCTCCT...GTAGAGGCCTGCCTGCATTTCACAGTGCTCTGTACATGGGTTATTAACTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS-3UTR CAA 90 bp | TTTGCATCACATTGTTTACAGAATGTGCAAAGGCCATTCTGTGTGTCCATCCATACAGATGTGATCTGCTaGCAGAAATTGTCTCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: FASHCLQNVQRPFCVSIHTDVIC*QKLSPC Trigger: ACATGGAGACAATTTCTGCAAGCAGATCACATCTGT...ATGGATGGACACACAGAATGGCCTTTGCACATTCTGTAAACAATGTGATGCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS CCA 90 bp | GATTTGTTTTCTATAGACAGGATTGCAGTTTCTTCCATTAGAGCCTaGATATCTTTTTCAACATCAACCTTGCTGATGGCACAGTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: DLFSIDRIAVSSIRA*ISFSTSTLLMAQWI Trigger: GATCCACTGTGCCATCAGCAAGGTTGATGTTGAAAAAGATATCCAGGCTCTAATGGAAGAAACTGCAATCCTGTCTATAGAAAACAAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS GCA 90 bp | TTTGTCCAAAAAGAGAAATATGTTGGCTGTACTGGTTTAAGTTATTaGATAAAAGTTGAATTCTTTCCTTCTCCAGCTCCAGCATGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FVQKEKYVGCTGLSY*IKVEFFPSPAPACS Trigger: AGAGCATGCTGGAGCTGGAGAAGGAAAGAATTCAACTTTTATGCAATAACTTAAACCAGTACAGCCAACATATTTCTCTTTTTGGACAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS TCA 72 bp | GCAGGGCTTTGGCCGTTGCTCCAGGTCTGCCAACACTaGCGACAGTTTGTAGGAGTTCGCTTGCAAAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: AGLWPLLQVCQH*RQFVGVRLQKV Trigger: GACCTTTTGCAAGCGAACTCCTACAAACTGTCGTCAGTGTTGGCAGACCTGGAGCAACGGCCAAAGCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS CAA 72 bp | TGGGACACAGTAGAGCCTGAAGGTGAAGAGCTTGGATaGTTCTGCCCACCCGCAGGTGCTTTGCTCTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: WDTVEPEGEELG*FCPPAGALLSA Trigger: AGCTGAGAGCAAAGCACCTGCGGGTGGGCAGAACAATCCAAGCTCTTCACCTTCAGGCTCTACTGTGTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS GCA 72 bp | ACAGTAGAGCCTGAAGGTGAAGAGCTTGGATTGTTCTaGCCACCCGCAGGTGCTTTGCTCTCAGCTTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: TVEPEGEELGLF*PPAGALLSAFS Trigger: AGAGAAAGCTGAGAGCAAAGCACCTGCGGGTGGGCAGAACAATCCAAGCTCTTCACCTTCAGGCTCTACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS CCA 72 bp | TTTTCTTTCCACTTGAAAATGCAGGTGCTACAGGGATaGCAGGGCTTTGGCCGTTGCTCCAGGTCTGCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: FSFHLKMQVLQG*QGFGRCSRSAN Trigger: GTTGGCAGACCTGGAGCAACGGCCAAAGCCCTGCCATCCCTGTAGCACCTGCATTTTCAAGTGGAAAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS CAA 90 bp | CCTGAAGGTGAAGAGCTTGGATTGTTCTGCCCACCCGCAGGTGCTTaGCTCTCAGCTTTCTCTAATCTCTTCGTCAAAAGAGGCCGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PEGEELGLFCPPAGA*LSAFSNLFVKRGRD Trigger: ATCCCGGCCTCTTTTGACGAAGAGATTAGAGAAAGCTGAGAGCAAAGCACCTGCGGGTGGGCAGAACAATCCAAGCTCTTCACCTTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS CAA 90 bp | TTGCTGGCTTGGGACACAGTAGAGCCTGAAGGTGAAGAGCTTGGATaGTTCTGCCCACCCGCAGGTGCTTTGCTCTCAGCTTTCTCTAAT | + |
|
Preference number: 6 (lower is better) Translates to: LLAWDTVEPEGEELG*FCPPAGALLSAFSN Trigger: ATTAGAGAAAGCTGAGAGCAAAGCACCTGCGGGTGGGCAGAACAATCCAAGCTCTTCACCTTCAGGCTCTACTGTGTCCCAAGCCAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS CAA 90 bp | GAGGAGCTGCTGGCGAGTGCTTTAAGCTTCCGCTCCAAGCCTTCTTaGTCTCTTGAGGCCTTTTCAATGTCTCTTTGCAGTCTCCCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: EELLASALSFRSKPS*SLEAFSMSLCSLPN Trigger: ATTGGGGAGACTGCAAAGAGACATTGAAAAGGCCTCAAGAGACAAAGAAGGCTTGGAGCGGAAGCTTAAAGCACTCGCCAGCAGCTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS CAA 72 bp | AGGAGCTTCTGCTTCTCCTTCTGGGTCAGGGATTGCTaGGAGCTTTCTACAAGGTGGAAAAGTGCTTCATGC | + |
|
Preference number: 6 (lower is better) Translates to: RSFCFSFWVRDC*ELSTRWKSASC Trigger: GCATGAAGCACTTTTCCACCTTGTAGAAAGCTCCAAGCAATCCCTGACCCAGAAGGAGAAGCAGAAGCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS CAA 90 bp | TCATCTTGCCTGGCTTGGAACGTATATAAGGCTTTGCAAAGATGCTaGCTGGCTTGGGACACAGTAGAGCCTGAAGGTGAAGAGCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SSCLAWNVYKALQRC*LAWDTVEPEGEELG Trigger: TCCAAGCTCTTCACCTTCAGGCTCTACTGTGTCCCAAGCCAGCAAGCATCTTTGCAAAGCCTTATATACGTTCCAAGCCAGGCAAGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS CAA 72 bp | GGACCTGGTGTGTTGGCTTTATCGCTTCCAACTCAATaGCTTTGCCAAGTTTTTGATGGAGGTCTGCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GPGVLALSLPTQ*LCQVFDGGLLQ Trigger: CTGCAGCAGACCTCCATCAAAAACTTGGCAAAGCAATTGAGTTGGAAGCGATAAAGCCAACACACCAGGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS CAA 72 bp | CTGGCGAGTGCTTTAAGCTTCCGCTCCAAGCCTTCTTaGTCTCTTGAGGCCTTTTCAATGTCTCTTTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LASALSFRSKPS*SLEAFSMSLCS Trigger: ACTGCAAAGAGACATTGAAAAGGCCTCAAGAGACAAAGAAGGCTTGGAGCGGAAGCTTAAAGCACTCGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS CAA 72 bp | CTGGCTTGGAACGTATATAAGGCTTTGCAAAGATGCTaGCTGGCTTGGGACACAGTAGAGCCTGAAGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LAWNVYKALQRC*LAWDTVEPEGE Trigger: TTCACCTTCAGGCTCTACTGTGTCCCAAGCCAGCAAGCATCTTTGCAAAGCCTTATATACGTTCCAAGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS CAA 90 bp | AGTTTGTTGAGGAGCTTCTGCTTCTCCTTCTGGGTCAGGGATTGCTaGGAGCTTTCTACAAGGTGGAAAAGTGCTTCATGCTTCTTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: SLLRSFCFSFWVRDC*ELSTRWKSASCFLV Trigger: TACCAAGAAGCATGAAGCACTTTTCCACCTTGTAGAAAGCTCCAAGCAATCCCTGACCCAGAAGGAGAAGCAGAAGCTCCTCAACAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS CAA 90 bp | GCAGTTTCTTCCATTAGAGCCTGGATATCTTTTTCAACATCAACCTaGCTGATGGCACAGTGGATCTGTGTGTGGCATGTGGTCAGCGTT | + |
|
Preference number: 6 (lower is better) Translates to: AVSSIRAWISFSTST*LMAQWICVWHVVSV Trigger: AACGCTGACCACATGCCACACACAGATCCACTGTGCCATCAGCAAGGTTGATGTTGAAAAAGATATCCAGGCTCTAATGGAAGAAACTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS GCA 72 bp | GACCTGGTGTGTTGGCTTTATCGCTTCCAACTCAATTaGTTTGCCAAGTTTTTGATGGAGGTCTGCTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: DLVCWLYRFQLN*FAKFLMEVCCR Trigger: TCTGCAGCAGACCTCCATCAAAAACTTGGCAAAGCAATTGAGTTGGAAGCGATAAAGCCAACACACCAGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS CAA 72 bp | AAGCCCTTTGGCGTAGCTAATCTCCAGGTTGGCCCTTaGCTGAAGAACAGATGTGATCTGCTTGCAGAAATT | + |
|
Preference number: 6 (lower is better) Translates to: KPFGVANLQVGP*LKNRCDLLAEI Trigger: AATTTCTGCAAGCAGATCACATCTGTTCTTCAGCAAAGGGCCAACCTGGAGATTAGCTACGCCAAAGGGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS CAA 72 bp | GGCACAGTGGATCTGTGTGTGGCATGTGGTCAGCGTTaGTCCAAAAAGAGAAATATGTTGGCTGTACTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GTVDLCVACGQR*SKKRNMLAVLV Trigger: AACCAGTACAGCCAACATATTTCTCTTTTTGGACAAACGCTGACCACATGCCACACACAGATCCACTGTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS CAA 72 bp | TCATCATCTTGCCTGGCTTGGAACGTATATAAGGCTTaGCAAAGATGCTTGCTGGCTTGGGACACAGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSSCLAWNVYKA*QRCLLAWDTVE Trigger: CTCTACTGTGTCCCAAGCCAGCAAGCATCTTTGCAAAGCCTTATATACGTTCCAAGCCAGGCAAGATGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS CAA 90 bp | AAATTCAACTCATCATCTTGCCTGGCTTGGAACGTATATAAGGCTTaGCAAAGATGCTTGCTGGCTTGGGACACAGTAGAGCCTGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: KFNSSSCLAWNVYKA*QRCLLAWDTVEPEG Trigger: ACCTTCAGGCTCTACTGTGTCCCAAGCCAGCAAGCATCTTTGCAAAGCCTTATATACGTTCCAAGCCAGGCAAGATGATGAGTTGAATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
||
| CDS CCA 72 bp | TCTCTTCTTCTCTTGCATACTCAGGACCTGGTGTGTTaGCTTTATCGCTTCCAACTCAATTGCTTTGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: SLLLLHTQDLVC*LYRFQLNCFAK Trigger: CTTGGCAAAGCAATTGAGTTGGAAGCGATAAAGCCAACACACCAGGTCCTGAGTATGCAAGAGAAGAAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS CCA 72 bp | AGCGACTTTCTCTTCTTCTCTTGCATACTCAGGACCTaGTGTGTTGGCTTTATCGCTTCCAACTCAATTGCT | + |
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Preference number: 6 (lower is better) Translates to: SDFLFFSCILRT*CVGFIASNSIA Trigger: AGCAATTGAGTTGGAAGCGATAAAGCCAACACACCAGGTCCTGAGTATGCAAGAGAAGAAGAGAAAGTCGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS TCA 72 bp | TTTATCGCTTCCAACTCAATTGCTTTGCCAAGTTTTTaGTGGAGGTCTGCTGCAGACTTCATGCTCTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: FIASNSIALPSF*WRSAADFMLSE Trigger: CTCAGAGAGCATGAAGTCTGCAGCAGACCTCCATCAAAAACTTGGCAAAGCAATTGAGTTGGAAGCGATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS CAA 72 bp | TTCTCTTCTTCTCTTGCATACTCAGGACCTGGTGTGTaGGCTTTATCGCTTCCAACTCAATTGCTTTGCCAA | + |
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Preference number: 6 (lower is better) Translates to: FSSSLAYSGPGV*ALSLPTQLLCQ Trigger: TTGGCAAAGCAATTGAGTTGGAAGCGATAAAGCCAACACACCAGGTCCTGAGTATGCAAGAGAAGAAGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS CAA 90 bp | CAAGCGACTTTCTCTTCTTCTCTTGCATACTCAGGACCTGGTGTGTaGGCTTTATCGCTTCCAACTCAATTGCTTTGCCAAGTTTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: QATFSSSLAYSGPGV*ALSLPTQLLCQVFD Trigger: ATCAAAAACTTGGCAAAGCAATTGAGTTGGAAGCGATAAAGCCAACACACCAGGTCCTGAGTATGCAAGAGAAGAAGAGAAAGTCGCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS CAA 72 bp | AAATTGTCTCCATGTTGGGCAAACTCTTTCAGGCTCTaGTATACTTTATTGTACGAACAGTCCGTCAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: KLSPCWANSFRL*YTLLYEQSVSG Trigger: CCCACTGACGGACTGTTCGTACAATAAAGTATACAAGAGCCTGAAAGAGTTTGCCCAACATGGAGACAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS CAA 72 bp | ATAAAGACTTCCGTCGCTCTTTGTCCATTGGGTTCTTaGGATCTTCTTCAAAATAGTCAGCCAGGAGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: IKTSVALCPLGS*DLLQNSQPGEA Trigger: AGCTTCTCCTGGCTGACTATTTTGAAGAAGATCCAAAGAACCCAATGGACAAAGAGCGACGGAAGTCTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS CAA 90 bp | TGGGTTTTAATAAAGACTTCCGTCGCTCTTTGTCCATTGGGTTCTTaGGATCTTCTTCAAAATAGTCAGCCAGGAGAAGCTCCGATTTGT | + |
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Preference number: 6 (lower is better) Translates to: WVLIKTSVALCPLGS*DLLQNSQPGEAPIC Trigger: ACAAATCGGAGCTTCTCCTGGCTGACTATTTTGAAGAAGATCCAAAGAACCCAATGGACAAAGAGCGACGGAAGTCTTTATTAAAACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS CAA 90 bp | TTGCTGAAGAACAGATGTGATCTGCTTGCAGAAATTGTCTCCATGTaGGGCAAACTCTTTCAGGCTCTTGTATACTTTATTGTACGAACA | + |
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Preference number: 6 (lower is better) Translates to: LLKNRCDLLAEIVSM*GKLFQALVYFIVRT Trigger: TGTTCGTACAATAAAGTATACAAGAGCCTGAAAGAGTTTGCCCAACATGGAGACAATTTCTGCAAGCAGATCACATCTGTTCTTCAGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS CCA 72 bp | ACAGATGTGATCTGCTTGCAGAAATTGTCTCCATGTTaGGCAAACTCTTTCAGGCTCTTGTATACTTTATTG | + |
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Preference number: 6 (lower is better) Translates to: TDVICLQKLSPC*ANSFRLLYTLL Trigger: CAATAAAGTATACAAGAGCCTGAAAGAGTTTGCCCAACATGGAGACAATTTCTGCAAGCAGATCACATCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS CCA 72 bp | TGTCTCCTTTTTCCAAATTCAACTCATCATCTTGCCTaGCTTGGAACGTATATAAGGCTTTGCAAAGATGCT | + |
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Preference number: 6 (lower is better) Translates to: CLLFPNSTHHLA*LGTYIRLCKDA Trigger: AGCATCTTTGCAAAGCCTTATATACGTTCCAAGCCAGGCAAGATGATGAGTTGAATTTGGAAAAAGGAGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS CAA 72 bp | TGGGTTTTAATAAAGACTTCCGTCGCTCTTTGTCCATaGGGTTCTTTGGATCTTCTTCAAAATAGTCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: WVLIKTSVALCP*GSLDLLQNSQP Trigger: TGGCTGACTATTTTGAAGAAGATCCAAAGAACCCAATGGACAAAGAGCGACGGAAGTCTTTATTAAAACCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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| CDS CAA 72 bp | AACAGATGTGATCTGCTTGCAGAAATTGTCTCCATGTaGGGCAAACTCTTTCAGGCTCTTGTATACTTTATT | + |
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Preference number: 6 (lower is better) Translates to: NRCDLLAEIVSM*GKLFQALVYFI Trigger: AATAAAGTATACAAGAGCCTGAAAGAGTTTGCCCAACATGGAGACAATTTCTGCAAGCAGATCACATCTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041865.8 |
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