Pregenerated sensors for NOSIP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003421Ensembl transcript IDs: ENSMUST00000003513.11, ENSMUST00000107829.9, ENSMUST00000209243.2, ENSMUST00000210088.2, ENSMUST00000210520.2, ENSMUST00000211465.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGACCCACAGGTTCACGCCGGGGTTTCTGCCTGGTCCTAAGTGACTaGGTAAATCCCAGGAGCCCAGGCCCACACCGCAGGCCCACTCCT | + |
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Preference number: 1 (lower is better) Translates to: RPTGSRRGFCLVLSD*VNPRSPGPHRRPTP Trigger: AGGAGTGGGCCTGCGGTGTGGGCCTGGGCTCCTGGGATTTACTCAGTCACTTAGGACCAGGCAGAAACCCCGGCGTGAACCTGTGGGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| 3UTR TCA 90 bp | GAGACTTGCACTTCTTGTTCAGGGCACCCTCTTCCAAGTCCTGCCTaGGGCTGGAGGAGACCCACAGGTTCACGCCGGGGTTTCTGCCTG | + |
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Preference number: 1 (lower is better) Translates to: ETCTSCSGHPLPSPA*GWRRPTGSRRGFCL Trigger: CAGGCAGAAACCCCGGCGTGAACCTGTGGGTCTCCTCCAGCCTCAGGCAGGACTTGGAAGAGGGTGCCCTGAACAAGAAGTGCAAGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| 3UTR GCA 90 bp | TCACGAGACTTGCACTTCTTGTTCAGGGCACCCTCTTCCAAGTCCTaGCTGAGGCTGGAGGAGACCCACAGGTTCACGCCGGGGTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: SRDLHFLFRAPSSKS*LRLEETHRFTPGFL Trigger: CAGAAACCCCGGCGTGAACCTGTGGGTCTCCTCCAGCCTCAGGCAGGACTTGGAAGAGGGTGCCCTGAACAAGAAGTGCAAGTCTCGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| 3UTR CCA 90 bp | CACAAAGTAGCCTCAATTTTGCAGCAGTTCTCTTCTGTGATGGGATaGAAACACGGGGTGAAGATGGCTCAGTGGTTTAGAGTGCTTGCT | + |
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Preference number: 1 (lower is better) Translates to: HKVASILQQFSSVMG*KHGVKMAQWFRVLA Trigger: AGCAAGCACTCTAAACCACTGAGCCATCTTCACCCCGTGTTTCCATCCCATCACAGAAGAGAACTGCTGCAAAATTGAGGCTACTTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| 3UTR-3UTR GCA 90 bp | CATCCACGTTTATTAGGCCACGGCTCAGGCCTGCATCACTGGCCGAGACATTTCAGCCCGCAAAGCCGGTaGCGCCCCGCTGCAGCACGA | + |
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Preference number: 2 (lower is better) Translates to: HPRLLGHGSGLHHWPRHFSPQSR*RPAAAR Trigger: TCGTGCTGCAGCGGGGCGGCACCGGCTTTGCGGGCT...GAAATGTCTCGGCCAGTGATGCAGGCCTGAGCCGTGGCCTAATAAACGTGGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209243.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGCCCCCAGCATCTAGACTAGGCTACTCAAGGCTGCCTGACCCCAGAGCCTGGTCTGCGTCTCTTTaGGCAAGTTTAAGGGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: AWPPASRLGYSRLPDPRAWSASL*ASLRGL Trigger: CAGCCCCCTTAAACTTGCTCAAAGAGACGCAGACCA...GGCTCTGGGGTCAGGCAGCCTTGAGTAGCCTAGTCTAGATGCTGGGGGCCAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| 3UTR-3UTR TCA 90 bp | CATCCACGTTTATTAGGCCACGGCTCAGGCCTGCATCACTGGCCGAGACATTTCCCCGCTGCAGCACGATaGTGTCGCGCTCTGTCAGCG | + |
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Preference number: 2 (lower is better) Translates to: HPRLLGHGSGLHHWPRHFPAAAR*CRALSA Trigger: CGCTGACAGAGCGCGACATCATCGTGCTGCAGCGGG...GAAATGTCTCGGCCAGTGATGCAGGCCTGAGCCGTGGCCTAATAAACGTGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209243.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCAGTGTGCAGTGTGTAATGGGTCTGTAGGGATCGCTGGGGGAGGGGCACTTCTTCCAAGTCCTGCCTaGGGCTGGAGGAGACCCACA | + |
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Preference number: 2 (lower is better) Translates to: KQCAVCNGSVGIAGGGALLPSPA*GWRRPT Trigger: TGTGGGTCTCCTCCAGCCTCAGGCAGGACTTGGAAG...AAGTGCCCCTCCCCCAGCGATCCCTACAGACCCATTACACACTGCACACTGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| 3UTR-3UTR CCA 90 bp | TTGAGCAAGTTTAAGGGGGCTGGGGAAGGGAAGTTGGCTCTTGAGAGATATTCTGTCTCGGGAGGTAGCTaGCCTGGGAGTGCTATCACG | + |
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Preference number: 2 (lower is better) Translates to: LSKFKGAGEGKLALERYSVSGGS*PGSAIT Trigger: CGTGATAGCACTCCCAGGCCAGCTACCTCCCGAGAC...AGAATATCTCTCAAGAGCCAACTTCCCTTCCCCAGCCCCCTTAAACTTGCTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| 3UTR-3UTR CCA 90 bp | CTCAATTTTGCAGCAGTTCTCTTCTGTGATGGGATGGAAACACGGGGTGAAGATCAGAGGACCCAAGCCTaGCCCCCAGCATCTAGACTA | + |
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Preference number: 2 (lower is better) Translates to: LNFAAVLFCDGMETRGEDQRTQA*PPASRL Trigger: TAGTCTAGATGCTGGGGGCCAGGCTTGGGTCCTCTG...ATCTTCACCCCGTGTTTCCATCCCATCACAGAAGAGAACTGCTGCAAAATTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| 3UTR-3UTR TCA 90 bp | TTGAGCAAGTTTAAGGGGGCTGGGGAAGGGAAGTTGGCTCTTGAGAGATATTCTCTGGTCCTAAGTGACTaGGTAAATCCCAGGAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: LSKFKGAGEGKLALERYSLVLSD*VNPRSP Trigger: TGGGCTCCTGGGATTTACTCAGTCACTTAGGACCAG...AGAATATCTCTCAAGAGCCAACTTCCCTTCCCCAGCCCCCTTAAACTTGCTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| 3UTR-3UTR GCA 90 bp | AGCCTCAATTTTGCAGCAGTTCTCTTCTGTGATGGGATGGAAACACGGGGTGAATGCTATCACGAGACTTaGACTTCTTGTTCAGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: SLNFAAVLFCDGMETRGECYHET*TSCSGH Trigger: GTGCCCTGAACAAGAAGTGCAAGTCTCGTGATAGCA...TTCACCCCGTGTTTCCATCCCATCACAGAAGAGAACTGCTGCAAAATTGAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| 3UTR-3UTR CCA 90 bp | ACTTGCTTAGTGTGTGCATTTGCCAGTACAAAGAGAAAAGAAAGCTATTTTTACGTCTGTAGGGATCGCTaGGGGAGGGGCACTTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: TCLVCAFASTKRKESYFYVCRDR*GRGTWW Trigger: CCACCAAGTGCCCCTCCCCCAGCGATCCCTACAGAC...GTAAAAATAGCTTTCTTTTCTCTTTGTACTGGCAAATGCACACACTAAGCAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| 3UTR CAA 90 bp | GTGTGTGCATTTGCCAGTACAAAGAGAAAAGAAAGCTATTTTTACTaGGAGGCAGGGATGAGGGTGGTCTGCGTCTCTTTGAGCAAGTTT | + |
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Preference number: 2 (lower is better) Translates to: VCAFASTKRKESYFY*EAGMRVVCVSLSKF Trigger: AAACTTGCTCAAAGAGACGCAGACCACCCTCATCCCTGCCTCCAAGTAAAAATAGCTTTCTTTTCTCTTTGTACTGGCAAATGCACACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| 3UTR-3UTR TCA 90 bp | ATAATTGTTTCTCTTATTCTGAGGCAGTCTTATACAGCACAAAGTAGCCTCAATGAGGGTACGTGCATGTaGAGCAGTGTGCAGTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: IIVSLILRQSYTAQSSLNEGTCM*SSVQCV Trigger: TACACACTGCACACTGCTTCACATGCACGTACCCTC...ATTGAGGCTACTTTGTGCTGTATAAGACTGCCTCAGAATAAGAGAAACAATTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| 3UTR-3UTR TCA 90 bp | ACTTGCTTAGTGTGTGCATTTGCCAGTACAAAGAGAAAAGAAAGCTATTTTTACAGGGAAGTTGGCTCTTaGGAGATATTCTCAGGTGTT | + |
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Preference number: 2 (lower is better) Translates to: TCLVCAFASTKRKESYFYREVGS*EIFSGV Trigger: AACACCTGAGAATATCTCTCAAGAGCCAACTTCCCT...GTAAAAATAGCTTTCTTTTCTCTTTGTACTGGCAAATGCACACACTAAGCAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| 3UTR TCA 72 bp | AGCCCGCAAAGCCGGTGCCGCCCCGCTGCAGCACGATaGTGTCGCGCTCTGTCAGCGTGTCCCCATTCACGG | + |
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Preference number: 3 (lower is better) Translates to: SPQSRCRPAAAR*CRALSACPHSR Trigger: CCGTGAATGGGGACACGCTGACAGAGCGCGACATCATCGTGCTGCAGCGGGGCGGCACCGGCTTTGCGGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209243.2 |
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| 3UTR TCA 72 bp | GGTTCACGCCGGGGTTTCTGCCTGGTCCTAAGTGACTaGGTAAATCCCAGGAGCCCAGGCCCACACCGCAGG | + |
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Preference number: 3 (lower is better) Translates to: GSRRGFCLVLSD*VNPRSPGPHRR Trigger: CCTGCGGTGTGGGCCTGGGCTCCTGGGATTTACTCAGTCACTTAGGACCAGGCAGAAACCCCGGCGTGAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| 3UTR TCA 72 bp | CACAGGTTCACGCCGGGGTTTCTGCCTGGTCCTAAGTaGCTGAGTAAATCCCAGGAGCCCAGGCCCACACCG | + |
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Preference number: 3 (lower is better) Translates to: HRFTPGFLPGPK*LSKSQEPRPTP Trigger: CGGTGTGGGCCTGGGCTCCTGGGATTTACTCAGTCACTTAGGACCAGGCAGAAACCCCGGCGTGAACCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| 3UTR-3UTR CAA 90 bp | CTCAATTTTGCAGCAGTTCTCTTCTGTGATGGGATGGAAACACGGGGTGAAGATGAAAGCTATTTTTACTaGGAGGCAGGGATGAGGGTG | + |
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Preference number: 3 (lower is better) Translates to: LNFAAVLFCDGMETRGEDESYFY*EAGMRV Trigger: CACCCTCATCCCTGCCTCCAAGTAAAAATAGCTTTC...ATCTTCACCCCGTGTTTCCATCCCATCACAGAAGAGAACTGCTGCAAAATTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| 3UTR GCA 72 bp | CAGGTTAGTACGGCCTATGCAGGCATTGGACTCATGTaGACAAACCCCTCCCTTAGATATACATTAAGGAAC | + |
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Preference number: 3 (lower is better) Translates to: QVSTAYAGIGLM*TNPSLRYTLRN Trigger: GTTCCTTAATGTATATCTAAGGGAGGGGTTTGTGCACATGAGTCCAATGCCTGCATAGGCCGTACTAACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR CCA 90 bp | GCCGGTGCCGCCCCGCTGCAGCACGATGATGTCGCGCTCTGTCAGCGTGTCCCCCTACGGGACCCACACTaGGCCCTGGCTGTTCACCCT | + |
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Preference number: 4 (lower is better) Translates to: AGAAPLQHDDVALCQRVPLRDPH*ALAVHP Trigger: AGGGTGAACAGCCAGGGCCCAGTGTGGGTCCCGTAG...GGGGACACGCTGACAGAGCGCGACATCATCGTGCTGCAGCGGGGCGGCACCGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209243.2 |
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| CDS-3UTR CCA 90 bp | GGAGCCCGCAAAGCCGGTGCCGCCCCGCTGCAGCACGATGATGTCGCGCTCTGTGTGACCACAGGGTCATaGCAGGGCTGCAGAGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: GARKAGAAPLQHDDVALCVTTGS*QGCRER Trigger: TCTCTCTCTGCAGCCCTGCCATGACCCTGTGGTCAC...ACAGAGCGCGACATCATCGTGCTGCAGCGGGGCGGCACCGGCTTTGCGGGCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209243.2 |
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| CDS-3UTR CCA 90 bp | TGCAGCACGATGATGTCGCGCTCTGTCAGCGTGTCCCCATTCACGGGGTCCACCGGGGCCGGCTCACGATaGCCGCCTCCTTCTCTAGGA | + |
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Preference number: 4 (lower is better) Translates to: CSTMMSRSVSVSPFTGSTGAGSR*PPPSLG Trigger: TCCTAGAGAAGGAGGCGGCCATCGTGAGCCGGCCCC...GGTGGACCCCGTGAATGGGGACACGCTGACAGAGCGCGACATCATCGTGCTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000209243.2 ENSMUST00000210520.2 |
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| CDS-3UTR TCA 90 bp | TCCAAGTCCTGCCTGAGGCTGGAGGAGACCCACAGGTTCACGCCGGGGTTTCTGCTGCGTGAAGCGCACTaGCGTCAGGTCCGACATGCG | + |
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Preference number: 4 (lower is better) Translates to: SKSCLRLEETHRFTPGFLLREAH*RQVRHA Trigger: CGCATGTCGGACCTGACGTCAGTGCGCTTCACGCAG...CAGAAACCCCGGCGTGAACCTGTGGGTCTCCTCCAGCCTCAGGCAGGACTTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR GCA 90 bp | TGTCGCGCTCTGTCAGCGTGTCCCCATTCACGGGGTCCACCATGTCCTTCCGGAAGACGGCCCCTGCAGTaGAGTTCTTGCCATGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: CRALSACPHSRGPPCPSGRRPLQ*SSCHAA Trigger: CGCGGCATGGCAAGAACTGCACTGCAGGGGCCGTCT...TCCGGAAGGACATGGTGGACCCCGTGAATGGGGACACGCTGACAGAGCGCGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000210520.2 |
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| CDS-3UTR CCA 90 bp | AAAGCCGGTGCCGCCCCGCTGCAGCACGATGATGTCGCGCTCTGTCAGCGTGTCAGGAAGCCTCTAACTTaGTCCTGGGCTGCAGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: KAGAAPLQHDDVALCQRVRKPLT*SWAAAR Trigger: GCGAGCTGCAGCCCAGGACCAAGTTAGAGGCTTCCT...GACACGCTGACAGAGCGCGACATCATCGTGCTGCAGCGGGGCGGCACCGGCTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209243.2 |
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| CDS-3UTR TCA 90 bp | GTCGCGCTCTGTCAGCGTGTCCCCATTCACGGGGTCCACCATGTCCTTCCGGATCAACACACTCCAGGGTaGCCACAGCCCCACGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: VALCQRVPIHGVHHVLPDQHTPG*PQPHGF Trigger: AAAGCCGTGGGGCTGTGGTCACCCTGGAGTGTGTTG...ATCCGGAAGGACATGGTGGACCCCGTGAATGGGGACACGCTGACAGAGCGCGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000209243.2 |
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| CDS-3UTR GCA 90 bp | TCACGAGACTTGCACTTCTTGTTCAGGGCACCCTCTTCCAAGTCCTGCCTGAGGCCGGTGCCGCCCCGCTaGAGCACGATGATGTCGCGC | + |
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Preference number: 4 (lower is better) Translates to: SRDLHFLFRAPSSKSCLRPVPPR*STMMSR Trigger: GCGCGACATCATCGTGCTGCAGCGGGGCGGCACCGG...CCTCAGGCAGGACTTGGAAGAGGGTGCCCTGAACAAGAAGTGCAAGTCTCGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR CCA 90 bp | ATGATGTCGCGCTCTGTCAGCGTGTCCCCATTCACGGGGTCCACCATGTCCTTCGGGGCCGGCTCACGATaGCCGCCTCCTTCTCTAGGA | + |
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Preference number: 4 (lower is better) Translates to: MMSRSVSVSPFTGSTMSFGAGSR*PPPSLG Trigger: TCCTAGAGAAGGAGGCGGCCATCGTGAGCCGGCCCC...GAAGGACATGGTGGACCCCGTGAATGGGGACACGCTGACAGAGCGCGACATCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000209243.2 ENSMUST00000210520.2 |
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| CDS-3UTR CCA 90 bp | TGTGCAGTGTGTAATGGGTCTGTAGGGATCGCTGGGGGAGGGGCACTTGGTGGGCTACGGGACCCACACTaGGCCCTGGCTGTTCACCCT | + |
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Preference number: 4 (lower is better) Translates to: CAVCNGSVGIAGGGALGGLRDPH*ALAVHP Trigger: AGGGTGAACAGCCAGGGCCCAGTGTGGGTCCCGTAG...CCCACCAAGTGCCCCTCCCCCAGCGATCCCTACAGACCCATTACACACTGCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR CCA 90 bp | GATGTCGCGCTCTGTCAGCGTGTCCCCATTCACGGGGTCCACCATGTCCTTCCGACGGCTTTTCCAGCTTaGTGGCCTTTGCCTCGGGCG | + |
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Preference number: 4 (lower is better) Translates to: DVALCQRVPIHGVHHVLPTAFPA*WPLPRA Trigger: CGCCCGAGGCAAAGGCCACCAAGCTGGAAAAGCCGT...CGGAAGGACATGGTGGACCCCGTGAATGGGGACACGCTGACAGAGCGCGACATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000209243.2 |
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| CDS-3UTR TCA 90 bp | ATGTCGCGCTCTGTCAGCGTGTCCCCATTCACGGGGTCCACCATGTCCTTCCGGCAACACACTCCAGGGTaGCCACAGCCCCACTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: MSRSVSVSPFTGSTMSFRQHTPG*PQPHCV Trigger: AACACAGTGGGGCTGTGGTCACCCTGGAGTGTGTTG...CCGGAAGGACATGGTGGACCCCGTGAATGGGGACACGCTGACAGAGCGCGACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000210520.2 |
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| CDS-3UTR CCA 90 bp | GATGTCGCGCTCTGTCAGCGTGTCCCCATTCACGGGGTCCACCATGTCCTTCCGAGGAAGCCTCTAACTTaGTCCTGGGCTGCAGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: DVALCQRVPIHGVHHVLPRKPLT*SWAAAR Trigger: GCGAGCTGCAGCCCAGGACCAAGTTAGAGGCTTCCT...CGGAAGGACATGGTGGACCCCGTGAATGGGGACACGCTGACAGAGCGCGACATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209243.2 ENSMUST00000210520.2 |
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| CDS-3UTR GCA 90 bp | ACTCCTTCTGTCGCCGGGCCTACAATGAGGCGCCAGGCATCCAGATGTTCACATAGACGGCCCCTGCAGTaGAGTTCTTGCCATGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: TPSVAGPTMRRQASRCSHRRPLQ*SSCHAA Trigger: CGCGGCATGGCAAGAACTGCACTGCAGGGGCCGTCT...ATGTGAACATCTGGATGCCTGGCGCCTCATTGTAGGCCCGGCGACAGAAGGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR GCA 90 bp | CAGCACGATGATGTCGCGCTCTGTCAGCGTGTCCCCATTCACGGGGTCCACCATGGTGTAGACGGCCCCTaGAGTGCAGTTCTTGCCATG | + |
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Preference number: 4 (lower is better) Translates to: QHDDVALCQRVPIHGVHHGVDGP*SAVLAM Trigger: CATGGCAAGAACTGCACTGCAGGGGCCGTCTACACC...ATGGTGGACCCCGTGAATGGGGACACGCTGACAGAGCGCGACATCATCGTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000210520.2 |
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| CDS-3UTR GCA 90 bp | GATGTCGCGCTCTGTCAGCGTGTCCCCATTCACGGGGTCCACCATGTCCTTCCGTGGGCTGCAGCTCGCTaGAGCTCTTTCTGCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: DVALCQRVPIHGVHHVLPWAAAR*SSFCSS Trigger: AGAAGAGCAGAAAGAGCTGCAGCGAGCTGCAGCCCA...CGGAAGGACATGGTGGACCCCGTGAATGGGGACACGCTGACAGAGCGCGACATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209243.2 ENSMUST00000210520.2 |
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| CDS-3UTR GCA 90 bp | TGTCGCGCTCTGTCAGCGTGTCCCCATTCACGGGGTCCACCATGTCCTTCCGGATGGGCTGCAGCTCGCTaGAGCTCTTTCTGCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: CRALSACPHSRGPPCPSGWAAAR*SSFCSS Trigger: AGAAGAGCAGAAAGAGCTGCAGCGAGCTGCAGCCCA...TCCGGAAGGACATGGTGGACCCCGTGAATGGGGACACGCTGACAGAGCGCGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209243.2 ENSMUST00000210520.2 |
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| CDS-3UTR GCA 90 bp | TACAATGAGGCGCCAGGCATCCAGATGTTCACATCCACGTTTATTAGGCCACGGAGCCCGCAAAGCCGGTaGCGCCCCGCTGCAGCACGA | + |
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Preference number: 4 (lower is better) Translates to: YNEAPGIQMFTSTFIRPRSPQSR*RPAAAR Trigger: TCGTGCTGCAGCGGGGCGGCACCGGCTTTGCGGGCT...CCGTGGCCTAATAAACGTGGATGTGAACATCTGGATGCCTGGCGCCTCATTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR CCA 90 bp | AGCACGATGATGTCGCGCTCTGTCAGCGTGTCCCCATTCACGGGGTCCACCATGGTGACCACAGGGTCATaGCAGGGCTGCAGAGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: STMMSRSVSVSPFTGSTMVTTGS*QGCRER Trigger: TCTCTCTCTGCAGCCCTGCCATGACCCTGTGGTCAC...CATGGTGGACCCCGTGAATGGGGACACGCTGACAGAGCGCGACATCATCGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209243.2 ENSMUST00000210520.2 |
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| CDS-3UTR CCA 90 bp | TGTCGCGCTCTGTCAGCGTGTCCCCATTCACGGGGTCCACCATGTCCTTCCGGAGCTTTTCCAGCTTGGTaGCCTTTGCCTCGGGCGTTA | + |
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Preference number: 4 (lower is better) Translates to: CRALSACPHSRGPPCPSGAFPAW*PLPRAL Trigger: TAACGCCCGAGGCAAAGGCCACCAAGCTGGAAAAGC...TCCGGAAGGACATGGTGGACCCCGTGAATGGGGACACGCTGACAGAGCGCGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000209243.2 |
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| CDS-3UTR TCA 90 bp | AGACTTGCACTTCTTGTTCAGGGCACCCTCTTCCAAGTCCTGCCTGAGGCTGGACAACACACTCCAGGGTaGCCACAGCCCCAGAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: RLALLVQGTLFQVLPEAGQHTPG*PQPQRD Trigger: GTCCCTCTGGGGCTGTGGTCACCCTGGAGTGTGTTG...TCCAGCCTCAGGCAGGACTTGGAAGAGGGTGCCCTGAACAAGAAGTGCAAGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR GCA 90 bp | ACGATGATGTCGCGCTCTGTCAGCGTGTCCCCATTCACGGGGTCCACCATGTCCCTTTGTCCTTGTCCTTaGCTACGGGACCCACACTGG | + |
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Preference number: 4 (lower is better) Translates to: TMMSRSVSVSPFTGSTMSLCPCP*LRDPHW Trigger: CCAGTGTGGGTCCCGTAGGCAAGGACAAGGACAAAG...GGACATGGTGGACCCCGTGAATGGGGACACGCTGACAGAGCGCGACATCATCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209243.2 |
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| CDS-3UTR GCA 90 bp | TGTGCAGTGTGTAATGGGTCTGTAGGGATCGCTGGGGGAGGGGCACTTGGTGGGCCAGAAGCTGGGCAGTaGTTTGTCCTTGTCCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: CAVCNGSVGIAGGGALGGPEAGQ*FVLVLA Trigger: GGCAAGGACAAGGACAAAGCACTGCCCAGCTTCTGG...CCCACCAAGTGCCCCTCCCCCAGCGATCCCTACAGACCCATTACACACTGCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR GCA 90 bp | CACGATGATGTCGCGCTCTGTCAGCGTGTCCCCATTCACGGGGTCCACCATGTCCCAGAAGCTGGGCAGTaGTTTGTCCTTGTCCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: HDDVALCQRVPIHGVHHVPEAGQ*FVLVLA Trigger: GGCAAGGACAAGGACAAAGCACTGCCCAGCTTCTGG...GACATGGTGGACCCCGTGAATGGGGACACGCTGACAGAGCGCGACATCATCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209243.2 |
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| CDS-3UTR GCA 90 bp | CAGTGTGCAGTGTGTAATGGGTCTGTAGGGATCGCTGGGGGAGGGGCACTTGGTACAGAGTCGTCCAGCTaGGTGAAGCGCACTGACGTC | + |
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Preference number: 4 (lower is better) Translates to: QCAVCNGSVGIAGGGALGTESSS*VKRTDV Trigger: GACGTCAGTGCGCTTCACGCAGCTGGACGACTCTGT...ACCAAGTGCCCCTCCCCCAGCGATCCCTACAGACCCATTACACACTGCACACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR GCA 90 bp | AGACTTGCACTTCTTGTTCAGGGCACCCTCTTCCAAGTCCTGCCTGAGGCTGGAACGTCAGGTCCGACATaGGCAGTGGCTTCCCGGACA | + |
|
Preference number: 4 (lower is better) Translates to: RLALLVQGTLFQVLPEAGTSGPT*AVASRT Trigger: TGTCCGGGAAGCCACTGCGCATGTCGGACCTGACGT...TCCAGCCTCAGGCAGGACTTGGAAGAGGGTGCCCTGAACAAGAAGTGCAAGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| 3UTR CAA 72 bp | CGGGAGGTAGCTGGCCTGGGAGTGCTATCACGAGACTaGCACTTCTTGTTCAGGGCACCCTCTTCCAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: REVAGLGVLSRD*HFLFRAPSSKS Trigger: GGACTTGGAAGAGGGTGCCCTGAACAAGAAGTGCAAGTCTCGTGATAGCACTCCCAGGCCAGCTACCTCCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR GCA 90 bp | TGTCGCCGGGCCTACAATGAGGCGCCAGGCATCCAGATGTTCACATCCACGTTTCTTTGTCCTTGTCCTTaGCTACGGGACCCACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: CRRAYNEAPGIQMFTSTFLCPCP*LRDPHW Trigger: CCAGTGTGGGTCCCGTAGGCAAGGACAAGGACAAAG...AAACGTGGATGTGAACATCTGGATGCCTGGCGCCTCATTGTAGGCCCGGCGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR CCA 90 bp | ACGGCTCAGGCCTGCATCACTGGCCGAGACATTTCTGCCTGTAGCTTCACTCCGGCGATCTCTCTCTTCTaGTGCAGGATGTACTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TAQACITGRDISACSFTPAISLF*CRMYSR Trigger: CCTGGAGTACATCCTGCACCAGAAGAGAGAGATCGC...CGGAGTGAAGCTACAGGCAGAAATGTCTCGGCCAGTGATGCAGGCCTGAGCCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209243.2 |
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| CDS-3UTR GCA 90 bp | TCACGAGACTTGCACTTCTTGTTCAGGGCACCCTCTTCCAAGTCCTGCCTGAGGCGCTGCAGCTCTTTCTaGTCTTCTCTCCTCGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SRDLHFLFRAPSSKSCLRRCSSF*SSLLAP Trigger: AGGAGCGAGGAGAGAAGAGCAGAAAGAGCTGCAGCG...CCTCAGGCAGGACTTGGAAGAGGGTGCCCTGAACAAGAAGTGCAAGTCTCGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR CCA 90 bp | TGTCGCCGGGCCTACAATGAGGCGCCAGGCATCCAGATGTTCACATCCACGTTTGCGATCTCTCTCTTCTaGTGCAGGATGTACTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CRRAYNEAPGIQMFTSTFAISLF*CRMYSR Trigger: CCTGGAGTACATCCTGCACCAGAAGAGAGAGATCGC...AAACGTGGATGTGAACATCTGGATGCCTGGCGCCTCATTGTAGGCCCGGCGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR CCA 90 bp | ACGGCTCAGGCCTGCATCACTGGCCGAGACATTTCTGCCTGTAGCTTCACTCCGAGGGAATCCAGAAGCTaGGCAGTGCTTTGTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: TAQACITGRDISACSFTPRESRS*AVLCPC Trigger: ACAAGGACAAAGCACTGCCCAGCTTCTGGATTCCCT...CGGAGTGAAGCTACAGGCAGAAATGTCTCGGCCAGTGATGCAGGCCTGAGCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209243.2 |
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| CDS-3UTR CCA 90 bp | GCCTCAATTTTGCAGCAGTTCTCTTCTGTGATGGGATGGAAACACGGGGTGAAGGTCCGACATGCGCAGTaGCTTCCCGGACATCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASILQQFSSVMGWKHGVKVRHAQ*LPGHRA Trigger: TGCCCGATGTCCGGGAAGCCACTGCGCATGTCGGAC...CTTCACCCCGTGTTTCCATCCCATCACAGAAGAGAACTGCTGCAAAATTGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| 3UTR CAA 72 bp | TACTTGGAGGCAGGGATGAGGGTGGTCTGCGTCTCTTaGAGCAAGTTTAAGGGGGCTGGGGAAGGGAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: YLEAGMRVVCVS*SKFKGAGEGKL Trigger: CAACTTCCCTTCCCCAGCCCCCTTAAACTTGCTCAAAGAGACGCAGACCACCCTCATCCCTGCCTCCAAGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR TCA 90 bp | CTCAATTTTGCAGCAGTTCTCTTCTGTGATGGGATGGAAACACGGGGTGAAGATCCCGCTGCAGCACGATaGTGTCGCGCTCTGTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: LNFAAVLFCDGMETRGEDPAAAR*CRALSA Trigger: CGCTGACAGAGCGCGACATCATCGTGCTGCAGCGGG...ATCTTCACCCCGTGTTTCCATCCCATCACAGAAGAGAACTGCTGCAAAATTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR GCA 90 bp | TACAATGAGGCGCCAGGCATCCAGATGTTCACATCCACGTTTATTAGGCCACGGGGTGTAGACGGCCCCTaGAGTGCAGTTCTTGCCATG | + |
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Preference number: 4 (lower is better) Translates to: YNEAPGIQMFTSTFIRPRGVDGP*SAVLAM Trigger: CATGGCAAGAACTGCACTGCAGGGGCCGTCTACACC...CCGTGGCCTAATAAACGTGGATGTGAACATCTGGATGCCTGGCGCCTCATTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR CCA 90 bp | GCCTCAATTTTGCAGCAGTTCTCTTCTGTGATGGGATGGAAACACGGGGTGAAGGTGACCACAGGGTCATaGCAGGGCTGCAGAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASILQQFSSVMGWKHGVKVTTGS*QGCRER Trigger: TCTCTCTCTGCAGCCCTGCCATGACCCTGTGGTCAC...CTTCACCCCGTGTTTCCATCCCATCACAGAAGAGAACTGCTGCAAAATTGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR CCA 90 bp | GAGAAAAGAAAGCTATTTTTACTTGGAGGCAGGGATGAGGGTGGTCTGCGTCTCACGGCTTTTCCAGCTTaGTGGCCTTTGCCTCGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: EKRKLFLLGGRDEGGLRLTAFPA*WPLPRA Trigger: CGCCCGAGGCAAAGGCCACCAAGCTGGAAAAGCCGT...GAGACGCAGACCACCCTCATCCCTGCCTCCAAGTAAAAATAGCTTTCTTTTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR GCA 90 bp | AGCCTCAATTTTGCAGCAGTTCTCTTCTGTGATGGGATGGAAACACGGGGTGAATGGGCTGCAGCTCGCTaGAGCTCTTTCTGCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SLNFAAVLFCDGMETRGEWAAAR*SSFCSS Trigger: AGAAGAGCAGAAAGAGCTGCAGCGAGCTGCAGCCCA...TTCACCCCGTGTTTCCATCCCATCACAGAAGAGAACTGCTGCAAAATTGAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR CCA 90 bp | CTCAATTTTGCAGCAGTTCTCTTCTGTGATGGGATGGAAACACGGGGTGAAGATGCTTTTCCAGCTTGGTaGCCTTTGCCTCGGGCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LNFAAVLFCDGMETRGEDAFPAW*PLPRAL Trigger: TAACGCCCGAGGCAAAGGCCACCAAGCTGGAAAAGC...ATCTTCACCCCGTGTTTCCATCCCATCACAGAAGAGAACTGCTGCAAAATTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR CCA 90 bp | AGCCTCAATTTTGCAGCAGTTCTCTTCTGTGATGGGATGGAAACACGGGGTGAAAGGGAATCCAGAAGCTaGGCAGTGCTTTGTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: SLNFAAVLFCDGMETRGERESRS*AVLCPC Trigger: ACAAGGACAAAGCACTGCCCAGCTTCTGGATTCCCT...TTCACCCCGTGTTTCCATCCCATCACAGAAGAGAACTGCTGCAAAATTGAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR CCA 90 bp | ACTTGCTTAGTGTGTGCATTTGCCAGTACAAAGAGAAAAGAAAGCTATTTTTACGGGGCCGGCTCACGATaGCCGCCTCCTTCTCTAGGA | + |
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Preference number: 4 (lower is better) Translates to: TCLVCAFASTKRKESYFYGAGSR*PPPSLG Trigger: TCCTAGAGAAGGAGGCGGCCATCGTGAGCCGGCCCC...GTAAAAATAGCTTTCTTTTCTCTTTGTACTGGCAAATGCACACACTAAGCAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR CCA 90 bp | ACTCAACACTTGCTTAGTGTGTGCATTTGCCAGTACAAAGAGAAAAGAAAGCTAAGGAAGCCTCTAACTTaGTCCTGGGCTGCAGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: TQHLLSVCICQYKEKRKLRKPLT*SWAAAR Trigger: GCGAGCTGCAGCCCAGGACCAAGTTAGAGGCTTCCT...TAGCTTTCTTTTCTCTTTGTACTGGCAAATGCACACACTAAGCAAGTGTTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR CCA 90 bp | ACTTGCTTAGTGTGTGCATTTGCCAGTACAAAGAGAAAAGAAAGCTATTTTTACGCACTGCGCACGGCGTaGCATTGCTCAGACTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TCLVCAFASTKRKESYFYALRTA*HCSDCL Trigger: GAGACAGTCTGAGCAATGCCACGCCGTGCGCAGTGC...GTAAAAATAGCTTTCTTTTCTCTTTGTACTGGCAAATGCACACACTAAGCAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR CAA 90 bp | GCCGGTGCCGCCCCGCTGCAGCACGATGATGTCGCGCTCTGTCAGCGTGTCCCCGGCAAGGTGGCAGCCTaGGGCATGAAGGGGTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: AGAAPLQHDDVALCQRVPGKVAA*GMKGLR Trigger: CCTCAACCCCTTCATGCCCAAGGCTGCCACCTTGCC...GGGGACACGCTGACAGAGCGCGACATCATCGTGCTGCAGCGGGGCGGCACCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000209243.2 |
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| CDS-3UTR CAA 90 bp | GAGCCCGCAAAGCCGGTGCCGCCCCGCTGCAGCACGATGATGTCGCGCTCTGTCCCAGCTTGGTGGCCTTaGCCTCGGGCGTTAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EPAKPVPPRCSTMMSRSVPAWWP*PRALVR Trigger: CCTCACTAACGCCCGAGGCAAAGGCCACCAAGCTGG...GACAGAGCGCGACATCATCGTGCTGCAGCGGGGCGGCACCGGCTTTGCGGGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209243.2 |
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| CDS TCA 90 bp | GAGTCCCACGCGGTCCACAGAGTCGTCCAGCTGCGTGAAGCGCACTaGCGTCAGGTCCGACATGCGCAGTGGCTTCCCGGACATCGGGCA | + |
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Preference number: 5 (lower is better) Translates to: ESHAVHRVVQLREAH*RQVRHAQWLPGHRA Trigger: TGCCCGATGTCCGGGAAGCCACTGCGCATGTCGGACCTGACGTCAGTGCGCTTCACGCAGCTGGACGACTCTGTGGACCGCGTGGGACTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003513.11 ENSMUST00000211465.2 |
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| CDS GCA 90 bp | CTCAACACACTCCAGGGTGACCACAGCCCCAGAGGGACGCAGCACTaGGCACGGCGTGGCATTGCTCAGACTGTCTCGGGTCACTGCGCA | + |
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Preference number: 5 (lower is better) Translates to: LNTLQGDHSPRGTQH*ARRGIAQTVSGHCA Trigger: TGCGCAGTGACCCGAGACAGTCTGAGCAATGCCACGCCGTGCGCAGTGCTGCGTCCCTCTGGGGCTGTGGTCACCCTGGAGTGTGTTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003513.11 ENSMUST00000107829.9 |
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| CDS GCA 90 bp | CAGCACTGCGCACGGCGTGGCATTGCTCAGACTGTCTCGGGTCACTaGGCAAACGTAGCGCTCACTGCGTGTGATGAGTCCCACGCGGTC | + |
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Preference number: 5 (lower is better) Translates to: QHCARRGIAQTVSGH*ANVALTACDESHAV Trigger: GACCGCGTGGGACTCATCACACGCAGTGAGCGCTACGTTTGCGCAGTGACCCGAGACAGTCTGAGCAATGCCACGCCGTGCGCAGTGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003513.11 ENSMUST00000107829.9 ENSMUST00000211465.2 |
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| CDS-3UTR CAA 90 bp | CTTCACTCCGGAGCCCGCAAAGCCGGTGCCGCCCCGCTGCAGCACGATGATGTCAAGCTGGGCAGTGCTTaGTCCTTGTCCTTGCCTACG | + |
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Preference number: 5 (lower is better) Translates to: LHSGARKAGAAPLQHDDVKLGSA*SLSLPT Trigger: CGTAGGCAAGGACAAGGACAAAGCACTGCCCAGCTT...GACATCATCGTGCTGCAGCGGGGCGGCACCGGCTTTGCGGGCTCCGGAGTGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209243.2 |
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| CDS TCA 90 bp | GGTCCACCATGTCCTTCCGGATCAGTTTCTCAACACACTCCAGGGTaGCCACAGCCCCAGAGGGACGCAGCACTGCGCACGGCGTGGCAT | + |
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Preference number: 5 (lower is better) Translates to: GPPCPSGSVSQHTPG*PQPQRDAALRTAWH Trigger: ATGCCACGCCGTGCGCAGTGCTGCGTCCCTCTGGGGCTGTGGTCACCCTGGAGTGTGTTGAGAAACTGATCCGGAAGGACATGGTGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003513.11 ENSMUST00000107829.9 |
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| CDS GCA 90 bp | TCACTGCGTGTGATGAGTCCCACGCGGTCCACAGAGTCGTCCAGCTaGGTGAAGCGCACTGACGTCAGGTCCGACATGCGCAGTGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: SLRVMSPTRSTESSS*VKRTDVRSDMRSGF Trigger: GAAGCCACTGCGCATGTCGGACCTGACGTCAGTGCGCTTCACGCAGCTGGACGACTCTGTGGACCGCGTGGGACTCATCACACGCAGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003513.11 ENSMUST00000211465.2 |
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| CDS CCA 90 bp | AGCTGGGCAGTGCTTTGTCCTTGTCCTTGCCTACGGGACCCACACTaGGCCCTGGCTGTTCACCCTCTGTGTTGGGCAAGGTGGCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: SWAVLCPCPCLRDPH*ALAVHPLCWARWQP Trigger: AGGCTGCCACCTTGCCCAACACAGAGGGTGAACAGCCAGGGCCCAGTGTGGGTCCCGTAGGCAAGGACAAGGACAAAGCACTGCCCAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003513.11 ENSMUST00000107829.9 ENSMUST00000209243.2 ENSMUST00000211465.2 |
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| CDS CCA 90 bp | GTCCCACGCGGTCCACAGAGTCGTCCAGCGGCTTTTCCAGCTTGGTaGCCTTTGCCTCGGGCGTTAGTGAGGGAATCCAGAAGCTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: VPRGPQSRPAAFPAW*PLPRALVRESRSWA Trigger: TGCCCAGCTTCTGGATTCCCTCACTAACGCCCGAGGCAAAGGCCACCAAGCTGGAAAAGCCGCTGGACGACTCTGTGGACCGCGTGGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107829.9 |
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| CDS-3UTR CAA 90 bp | CACGATGATGTCGCGCTCTGTCAGCGTGTCCCCATTCACGGGGTCCACCATGTCGGCAAGGTGGCAGCCTaGGGCATGAAGGGGTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HDDVALCQRVPIHGVHHVGKVAA*GMKGLR Trigger: CCTCAACCCCTTCATGCCCAAGGCTGCCACCTTGCC...GACATGGTGGACCCCGTGAATGGGGACACGCTGACAGAGCGCGACATCATCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000209243.2 ENSMUST00000210520.2 |
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| CDS-3UTR CAA 90 bp | ACATTTCTGCCTGTAGCTTCACTCCGGAGCCCGCAAAGCCGGTGCCGCCCCGCTGCTTTGTCCTTGTCCTaGCCTACGGGACCCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: TFLPVASLRSPQSRCRPAALSLS*PTGPTL Trigger: CAGTGTGGGTCCCGTAGGCAAGGACAAGGACAAAGC...AGCGGGGCGGCACCGGCTTTGCGGGCTCCGGAGTGAAGCTACAGGCAGAAATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209243.2 |
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| CDS-3UTR CAA 90 bp | TGTGCAGTGTGTAATGGGTCTGTAGGGATCGCTGGGGGAGGGGCACTTGGTGGGCCAGCTTGGTGGCCTTaGCCTCGGGCGTTAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CAVCNGSVGIAGGGALGGPAWWP*PRALVR Trigger: CCTCACTAACGCCCGAGGCAAAGGCCACCAAGCTGG...CCCACCAAGTGCCCCTCCCCCAGCGATCCCTACAGACCCATTACACACTGCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR CAA 90 bp | CACGATGATGTCGCGCTCTGTCAGCGTGTCCCCATTCACGGGGTCCACCATGTCCACAGCCCCACTGTGTaGGGCAAGGTGGCAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HDDVALCQRVPIHGVHHVHSPTV*GKVAAL Trigger: CAAGGCTGCCACCTTGCCCAACACAGTGGGGCTGTG...GACATGGTGGACCCCGTGAATGGGGACACGCTGACAGAGCGCGACATCATCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000210520.2 |
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| CDS CCA 90 bp | GGCCGGCTCACGATGGCCGCCTCCTTCTCTAGGAAGCCTCTAACTTaGTCCTGGGCTGCAGCTCGCTGCAGCTCTTTCTGCTCTTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GRLTMAASFSRKPLT*SWAAARCSSFCSSL Trigger: GAGAGAAGAGCAGAAAGAGCTGCAGCGAGCTGCAGCCCAGGACCAAGTTAGAGGCTTCCTAGAGAAGGAGGCGGCCATCGTGAGCCGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003513.11 ENSMUST00000107829.9 ENSMUST00000209243.2 ENSMUST00000210088.2 ENSMUST00000210520.2 ENSMUST00000211465.2 |
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| CDS CCA 90 bp | CAGTGCTTTGTCCTTGTCCTTGCCTACGGGACCCACACTGGGCCCTaGCTGTTCACCCTCTGTGTTGGGCAAGGTGGCAGCCTTGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QCFVLVLAYGTHTGP*LFTLCVGQGGSLGH Trigger: ATGCCCAAGGCTGCCACCTTGCCCAACACAGAGGGTGAACAGCCAGGGCCCAGTGTGGGTCCCGTAGGCAAGGACAAGGACAAAGCACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003513.11 ENSMUST00000107829.9 ENSMUST00000209243.2 ENSMUST00000211465.2 |
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| CDS CCA 90 bp | CCCACACTGGGCCCTGGCTGTTCACCCTCTGTGGAAGGGAGAAGCTaGGGTACACACTTCAGGAAGCCACCCCCTAAAGACCCGACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PTLGPGCSPSVEGRS*GTHFRKPPPKDPTK Trigger: CTTGGTCGGGTCTTTAGGGGGTGGCTTCCTGAAGTGTGTACCCCAGCTTCTCCCTTCCACAGAGGGTGAACAGCCAGGGCCCAGTGTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210088.2 |
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| CDS CCA 90 bp | AGCTGGGCAGTGCTTTGTCCTTGTCCTTGCCTACGGGACCCACACTaGGCCCTGGCTGTTCACCCTCTGTGGAAGGGAGAAGCTGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SWAVLCPCPCLRDPH*ALAVHPLWKGEAGV Trigger: TACCCCAGCTTCTCCCTTCCACAGAGGGTGAACAGCCAGGGCCCAGTGTGGGTCCCGTAGGCAAGGACAAGGACAAAGCACTGCCCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210088.2 |
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| CDS-3UTR CAA 90 bp | CAGTGTGCAGTGTGTAATGGGTCTGTAGGGATCGCTGGGGGAGGGGCACTTGGTGGCAAGGTGGCAGCCTaGGGCATGAAGGGGTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QCAVCNGSVGIAGGGALGGKVAA*GMKGLR Trigger: CCTCAACCCCTTCATGCCCAAGGCTGCCACCTTGCC...ACCAAGTGCCCCTCCCCCAGCGATCCCTACAGACCCATTACACACTGCACACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS-3UTR CAA 90 bp | TCCAAGTCCTGCCTGAGGCTGGAGGAGACCCACAGGTTCACGCCGGGGTTTCTGGCTTTGTCCTTGTCCTaGCCTACGGGACCCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: SKSCLRLEETHRFTPGFLALSLS*PTGPTL Trigger: CAGTGTGGGTCCCGTAGGCAAGGACAAGGACAAAGC...CAGAAACCCCGGCGTGAACCTGTGGGTCTCCTCCAGCCTCAGGCAGGACTTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS CCA 90 bp | GCTTGGTGGCCTTTGCCTCGGGCGTTAGTGAGGGAATCCAGAAGCTaGGCAGTGCTTTGTCCTTGTCCTTGCCTACGGGACCCACACTGG | + |
|
Preference number: 5 (lower is better) Translates to: AWWPLPRALVRESRS*AVLCPCPCLRDPHW Trigger: CCAGTGTGGGTCCCGTAGGCAAGGACAAGGACAAAGCACTGCCCAGCTTCTGGATTCCCTCACTAACGCCCGAGGCAAAGGCCACCAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000003513.11 ENSMUST00000107829.9 ENSMUST00000209243.2 ENSMUST00000210088.2 ENSMUST00000211465.2 |
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| CDS CCA 90 bp | AACACACTCCAGGGTGACCACAGCCCCACGGCTTTTCCAGCTTGGTaGCCTTTGCCTCGGGCGTTAGTGAGGGAATCCAGAAGCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: NTLQGDHSPTAFPAW*PLPRALVRESRSWA Trigger: TGCCCAGCTTCTGGATTCCCTCACTAACGCCCGAGGCAAAGGCCACCAAGCTGGAAAAGCCGTGGGGCTGTGGTCACCCTGGAGTGTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209243.2 |
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| CDS GCA 90 bp | TTAGTGAGGGAATCCAGAAGCTGGGCAGTGCTTTGTCCTTGTCCTTaGCTACGGGACCCACACTGGGCCCTGGCTGTTCACCCTCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LVRESRSWAVLCPCP*LRDPHWALAVHPLW Trigger: CCACAGAGGGTGAACAGCCAGGGCCCAGTGTGGGTCCCGTAGGCAAGGACAAGGACAAAGCACTGCCCAGCTTCTGGATTCCCTCACTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210088.2 |
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| CDS CCA 90 bp | CAGTGCTTTGTCCTTGTCCTTGCCTACGGGACCCACACTGGGCCCTaGCTGTTCACCCTCTGTGGAAGGGAGAAGCTGGGGTACACACTT | + |
|
Preference number: 5 (lower is better) Translates to: QCFVLVLAYGTHTGP*LFTLCGREKLGYTL Trigger: AAGTGTGTACCCCAGCTTCTCCCTTCCACAGAGGGTGAACAGCCAGGGCCCAGTGTGGGTCCCGTAGGCAAGGACAAGGACAAAGCACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210088.2 |
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| CDS GCA 90 bp | TTAGTGAGGGAATCCAGAAGCTGGGCAGTGCTTTGTCCTTGTCCTTaGCTACGGGACCCACACTGGGCCCTGGCTGTTCACCCTCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LVRESRSWAVLCPCP*LRDPHWALAVHPLC Trigger: ACACAGAGGGTGAACAGCCAGGGCCCAGTGTGGGTCCCGTAGGCAAGGACAAGGACAAAGCACTGCCCAGCTTCTGGATTCCCTCACTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003513.11 ENSMUST00000107829.9 ENSMUST00000209243.2 ENSMUST00000211465.2 |
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| CDS-3UTR CAA 90 bp | CTTATACAGCACAAAGTAGCCTCAATTTTGCAGCAGTTCTCTTCTGTGATGGGAAAGCTGGGCAGTGCTTaGTCCTTGTCCTTGCCTACG | + |
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Preference number: 5 (lower is better) Translates to: LIQHKVASILQQFSSVMGKLGSA*SLSLPT Trigger: CGTAGGCAAGGACAAGGACAAAGCACTGCCCAGCTT...TCCCATCACAGAAGAGAACTGCTGCAAAATTGAGGCTACTTTGTGCTGTATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003513.11 |
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| CDS GCA 72 bp | CTCCAGGGTGACCACAGCCCCAGAGGGACGCAGCACTaGGCACGGCGTGGCATTGCTCAGACTGTCTCGGGT | + |
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Preference number: 6 (lower is better) Translates to: LQGDHSPRGTQH*ARRGIAQTVSG Trigger: ACCCGAGACAGTCTGAGCAATGCCACGCCGTGCGCAGTGCTGCGTCCCTCTGGGGCTGTGGTCACCCTGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003513.11 ENSMUST00000107829.9 |
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| CDS CAA 90 bp | TTGCCTACGGGACCCACACTGGGCCCTGGCTGTTCACCCTCTGTGTaGGGCAAGGTGGCAGCCTTGGGCATGAAGGGGTTGAGGGGCCGG | + |
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Preference number: 6 (lower is better) Translates to: LPTGPTLGPGCSPSV*GKVAALGMKGLRGR Trigger: CCGGCCCCTCAACCCCTTCATGCCCAAGGCTGCCACCTTGCCCAACACAGAGGGTGAACAGCCAGGGCCCAGTGTGGGTCCCGTAGGCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003513.11 ENSMUST00000107829.9 ENSMUST00000209243.2 ENSMUST00000211465.2 |
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| CDS TCA 72 bp | GCGGTCCACAGAGTCGTCCAGCTGCGTGAAGCGCACTaGCGTCAGGTCCGACATGCGCAGTGGCTTCCCGGA | + |
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Preference number: 6 (lower is better) Translates to: AVHRVVQLREAH*RQVRHAQWLPG Trigger: TCCGGGAAGCCACTGCGCATGTCGGACCTGACGTCAGTGCGCTTCACGCAGCTGGACGACTCTGTGGACCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003513.11 ENSMUST00000211465.2 |
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| CDS CCA 72 bp | CCACAGCCCCAGAGGGACGCAGCACTGCGCACGGCGTaGCATTGCTCAGACTGTCTCGGGTCACTGCGCAAA | + |
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Preference number: 6 (lower is better) Translates to: PQPQRDAALRTA*HCSDCLGSLRK Trigger: TTTGCGCAGTGACCCGAGACAGTCTGAGCAATGCCACGCCGTGCGCAGTGCTGCGTCCCTCTGGGGCTGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003513.11 ENSMUST00000107829.9 |
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| CDS CCA 72 bp | TCGGGCAGGTCACCGTGCGGGACGGCTTTTCCAGCTTaGTGGCCTTTGCCTCGGGCGTTAGTGAGGGAATCC | + |
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Preference number: 6 (lower is better) Translates to: SGRSPCGTAFPA*WPLPRALVRES Trigger: GGATTCCCTCACTAACGCCCGAGGCAAAGGCCACCAAGCTGGAAAAGCCGTCCCGCACGGTGACCTGCCCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003513.11 ENSMUST00000210088.2 ENSMUST00000211465.2 |
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| CDS CCA 72 bp | GTCCTTGTCCTTGCCTACGGGACCCACACTGGGCCCTaGCTGTTCACCCTCTGTGGAAGGGAGAAGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: VLVLAYGTHTGP*LFTLCGREKLG Trigger: CCCCAGCTTCTCCCTTCCACAGAGGGTGAACAGCCAGGGCCCAGTGTGGGTCCCGTAGGCAAGGACAAGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210088.2 |
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| CDS CAA 90 bp | TCGGGCAGGTCACCGTGCGGGACGGCTTTTCCAGCTTGGTGGCCTTaGCCTCGGGCGTTAGTGAGGGAATCCAGAAGCTGGGCAGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: SGRSPCGTAFPAWWP*PRALVRESRSWAVL Trigger: AAGCACTGCCCAGCTTCTGGATTCCCTCACTAACGCCCGAGGCAAAGGCCACCAAGCTGGAAAAGCCGTCCCGCACGGTGACCTGCCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003513.11 ENSMUST00000210088.2 ENSMUST00000211465.2 |
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| CDS CAA 90 bp | AAGGGCAGGTATTTCTTGTCACCTGTGTTGGGCAAGGTGGCAGCCTaGGGCATGAAGGGGTTGAGGGGCCGGCTCACGATGGCCGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: KGRYFLSPVLGKVAA*GMKGLRGRLTMAAS Trigger: GGAGGCGGCCATCGTGAGCCGGCCCCTCAACCCCTTCATGCCCAAGGCTGCCACCTTGCCCAACACAGGTGACAAGAAATACCTGCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210088.2 |
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| CDS CCA 72 bp | GGCAGGTCACCGTGCGGGACGGCTTTTCCAGCTTGGTaGCCTTTGCCTCGGGCGTTAGTGAGGGAATCCAGA | + |
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Preference number: 6 (lower is better) Translates to: GRSPCGTAFPAW*PLPRALVRESR Trigger: TCTGGATTCCCTCACTAACGCCCGAGGCAAAGGCCACCAAGCTGGAAAAGCCGTCCCGCACGGTGACCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003513.11 ENSMUST00000210088.2 ENSMUST00000211465.2 |
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| CDS CCA 72 bp | CTCCAGGGTGACCACAGCCCCACGGCTTTTCCAGCTTaGTGGCCTTTGCCTCGGGCGTTAGTGAGGGAATCC | + |
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Preference number: 6 (lower is better) Translates to: LQGDHSPTAFPA*WPLPRALVRES Trigger: GGATTCCCTCACTAACGCCCGAGGCAAAGGCCACCAAGCTGGAAAAGCCGTGGGGCTGTGGTCACCCTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209243.2 |
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| CDS CAA 72 bp | ATCGGGCAGGTCACCGTGCGGGACGGCTTTTCCAGCTaGGTGGCCTTTGCCTCGGGCGTTAGTGAGGGAATC | + |
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Preference number: 6 (lower is better) Translates to: IGQVTVRDGFSS*VAFASGVSEGI Trigger: GATTCCCTCACTAACGCCCGAGGCAAAGGCCACCAAGCTGGAAAAGCCGTCCCGCACGGTGACCTGCCCGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003513.11 ENSMUST00000210088.2 ENSMUST00000211465.2 |
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| CDS CAA 90 bp | TCGGGCGTTAGTGAGGGAATCCAGAAGCTGGGCAGTGCTTTGTCCTaGTCCTTGCCTACGGGACCCACACTGGGCCCTGGCTGTTCACCC | + |
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Preference number: 6 (lower is better) Translates to: SGVSEGIQKLGSALS*SLPTGPTLGPGCSP Trigger: GGGTGAACAGCCAGGGCCCAGTGTGGGTCCCGTAGGCAAGGACAAGGACAAAGCACTGCCCAGCTTCTGGATTCCCTCACTAACGCCCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000003513.11 ENSMUST00000107829.9 ENSMUST00000209243.2 ENSMUST00000210088.2 ENSMUST00000211465.2 |
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| CDS CAA 90 bp | CGCGGTCCACAGAGTCGTCCAGCGGCTTTTCCAGCTTGGTGGCCTTaGCCTCGGGCGTTAGTGAGGGAATCCAGAAGCTGGGCAGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: RGPQSRPAAFPAWWP*PRALVRESRSWAVL Trigger: AAGCACTGCCCAGCTTCTGGATTCCCTCACTAACGCCCGAGGCAAAGGCCACCAAGCTGGAAAAGCCGCTGGACGACTCTGTGGACCGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107829.9 |
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| CDS CAA 90 bp | CTCCAGGGTGACCACAGCCCCACGGCTTTTCCAGCTTGGTGGCCTTaGCCTCGGGCGTTAGTGAGGGAATCCAGAAGCTGGGCAGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: LQGDHSPTAFPAWWP*PRALVRESRSWAVL Trigger: AAGCACTGCCCAGCTTCTGGATTCCCTCACTAACGCCCGAGGCAAAGGCCACCAAGCTGGAAAAGCCGTGGGGCTGTGGTCACCCTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209243.2 |
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| CDS TCA 72 bp | TGTCCTTCCGGATCAGTTTCTCAACACACTCCAGGGTaGCCACAGCCCCAGAGGGACGCAGCACTGCGCACG | + |
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Preference number: 6 (lower is better) Translates to: CPSGSVSQHTPG*PQPQRDAALRT Trigger: CGTGCGCAGTGCTGCGTCCCTCTGGGGCTGTGGTCACCCTGGAGTGTGTTGAGAAACTGATCCGGAAGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003513.11 ENSMUST00000107829.9 |
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| CDS GCA 72 bp | GCACGGCGTGGCATTGCTCAGACTGTCTCGGGTCACTaGGCAAACGTAGCGCTCACTGCGTGTGATGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: ARRGIAQTVSGH*ANVALTACDES Trigger: GGACTCATCACACGCAGTGAGCGCTACGTTTGCGCAGTGACCCGAGACAGTCTGAGCAATGCCACGCCGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003513.11 ENSMUST00000107829.9 ENSMUST00000211465.2 |
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| CDS CCA 72 bp | CTCCAGGATCGCTTCCCTCTCATACAGGTAGCCGTCTaGCGTGACCACAGGGTCATGGCAGGGCTGCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: LQDRFPLIQVAV*RDHRVMAGLQR Trigger: TCTCTGCAGCCCTGCCATGACCCTGTGGTCACGCCAGACGGCTACCTGTATGAGAGGGAAGCGATCCTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003513.11 ENSMUST00000107829.9 ENSMUST00000209243.2 ENSMUST00000210088.2 ENSMUST00000210520.2 ENSMUST00000211465.2 |
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| CDS CCA 72 bp | CAGGGTGACCACAGCCCCACGGCTTTTCCAGCTTGGTaGCCTTTGCCTCGGGCGTTAGTGAGGGAATCCAGA | + |
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Preference number: 6 (lower is better) Translates to: QGDHSPTAFPAW*PLPRALVRESR Trigger: TCTGGATTCCCTCACTAACGCCCGAGGCAAAGGCCACCAAGCTGGAAAAGCCGTGGGGCTGTGGTCACCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209243.2 |
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| CDS CAA 72 bp | TCACCGTGCGGGACGGCTTTTCCAGCTTGGTGGCCTTaGCCTCGGGCGTTAGTGAGGGAATCCAGAAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SPCGTAFPAWWP*PRALVRESRSW Trigger: CCAGCTTCTGGATTCCCTCACTAACGCCCGAGGCAAAGGCCACCAAGCTGGAAAAGCCGTCCCGCACGGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003513.11 ENSMUST00000210088.2 ENSMUST00000211465.2 |
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| CDS CAA 72 bp | GACCACAGCCCCACGGCTTTTCCAGCTTGGTGGCCTTaGCCTCGGGCGTTAGTGAGGGAATCCAGAAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: DHSPTAFPAWWP*PRALVRESRSW Trigger: CCAGCTTCTGGATTCCCTCACTAACGCCCGAGGCAAAGGCCACCAAGCTGGAAAAGCCGTGGGGCTGTGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209243.2 |
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| CDS CAA 90 bp | TTTGCCTCGGGCGTTAGTGAGGGAATCCAGAAGCTGGGCAGTGCTTaGTCCTTGTCCTTGCCTACGGGACCCACACTGGGCCCTGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: FASGVSEGIQKLGSA*SLSLPTGPTLGPGC Trigger: ACAGCCAGGGCCCAGTGTGGGTCCCGTAGGCAAGGACAAGGACAAAGCACTGCCCAGCTTCTGGATTCCCTCACTAACGCCCGAGGCAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000003513.11 ENSMUST00000107829.9 ENSMUST00000209243.2 ENSMUST00000210088.2 ENSMUST00000211465.2 |
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| CDS GCA 72 bp | AGGAAGCCTCTAACTTGGTCCTGGGCTGCAGCTCGCTaGAGCTCTTTCTGCTCTTCTCTCCTCGCTCCTCGC | + |
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Preference number: 6 (lower is better) Translates to: RKPLTWSWAAAR*SSFCSSLLAPR Trigger: GCGAGGAGCGAGGAGAGAAGAGCAGAAAGAGCTGCAGCGAGCTGCAGCCCAGGACCAAGTTAGAGGCTTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003513.11 ENSMUST00000107829.9 ENSMUST00000209243.2 ENSMUST00000210088.2 ENSMUST00000210520.2 ENSMUST00000211465.2 |
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| CDS GCA 72 bp | GAATCCAGAAGCTGGGCAGTGCTTTGTCCTTGTCCTTaGCTACGGGACCCACACTGGGCCCTGGCTGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: ESRSWAVLCPCP*LRDPHWALAVH Trigger: GTGAACAGCCAGGGCCCAGTGTGGGTCCCGTAGGCAAGGACAAGGACAAAGCACTGCCCAGCTTCTGGATTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000003513.11 ENSMUST00000107829.9 ENSMUST00000209243.2 ENSMUST00000210088.2 ENSMUST00000211465.2 |
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| CDS CCA 72 bp | GGTCCACAGAGTCGTCCAGCGGCTTTTCCAGCTTGGTaGCCTTTGCCTCGGGCGTTAGTGAGGGAATCCAGA | + |
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Preference number: 6 (lower is better) Translates to: GPQSRPAAFPAW*PLPRALVRESR Trigger: TCTGGATTCCCTCACTAACGCCCGAGGCAAAGGCCACCAAGCTGGAAAAGCCGCTGGACGACTCTGTGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107829.9 |
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| CDS CCA 72 bp | GGCCCTGGCTGTTCACCCTCTGTGGAAGGGAGAAGCTaGGGTACACACTTCAGGAAGCCACCCCCTAAAGAC | + |
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Preference number: 6 (lower is better) Translates to: GPGCSPSVEGRS*GTHFRKPPPKD Trigger: GTCTTTAGGGGGTGGCTTCCTGAAGTGTGTACCCCAGCTTCTCCCTTCCACAGAGGGTGAACAGCCAGGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210088.2 |
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| CDS CAA 72 bp | GGCGTTAGTGAGGGAATCCAGAAGCTGGGCAGTGCTTaGTCCTTGTCCTTGCCTACGGGACCCACACTGGGC | + |
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Preference number: 6 (lower is better) Translates to: GVSEGIQKLGSA*SLSLPTGPTLG Trigger: GCCCAGTGTGGGTCCCGTAGGCAAGGACAAGGACAAAGCACTGCCCAGCTTCTGGATTCCCTCACTAACGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000003513.11 ENSMUST00000107829.9 ENSMUST00000209243.2 ENSMUST00000210088.2 ENSMUST00000211465.2 |
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| CDS CAA 72 bp | CAGAGTCGTCCAGCGGCTTTTCCAGCTTGGTGGCCTTaGCCTCGGGCGTTAGTGAGGGAATCCAGAAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: QSRPAAFPAWWP*PRALVRESRSW Trigger: CCAGCTTCTGGATTCCCTCACTAACGCCCGAGGCAAAGGCCACCAAGCTGGAAAAGCCGCTGGACGACTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107829.9 |
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| CDS CAA 90 bp | GTTAGTGAGGGAATCCAGAAGCTGGGCAGTGCTTTGTCCTTGTCCTaGCCTACGGGACCCACACTGGGCCCTGGCTGTTCACCCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: VSEGIQKLGSALSLS*PTGPTLGPGCSPSV Trigger: CACAGAGGGTGAACAGCCAGGGCCCAGTGTGGGTCCCGTAGGCAAGGACAAGGACAAAGCACTGCCCAGCTTCTGGATTCCCTCACTAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000003513.11 ENSMUST00000107829.9 ENSMUST00000209243.2 ENSMUST00000210088.2 ENSMUST00000211465.2 |
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| CDS CCA 72 bp | CCTTTGCCTCGGGCGTTAGTGAGGGAATCCAGAAGCTaGGCAGTGCTTTGTCCTTGTCCTTGCCTACGGGAC | + |
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Preference number: 6 (lower is better) Translates to: PLPRALVRESRS*AVLCPCPCLRD Trigger: GTCCCGTAGGCAAGGACAAGGACAAAGCACTGCCCAGCTTCTGGATTCCCTCACTAACGCCCGAGGCAAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000003513.11 ENSMUST00000107829.9 ENSMUST00000209243.2 ENSMUST00000210088.2 ENSMUST00000211465.2 |
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