RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NOS3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028978

Ensembl transcript IDs: ENSMUST00000030834.7, ENSMUST00000115090.6

Found 297 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GTCTCATTTTCAATCATTGTAACTCACAAGGTTTGGGTTGGGCATCTGGCATGGGTCCATCAAAGCATATaGAGAGGGCAGCAGGATGCC +
Preference number: 2 (lower is better)
Translates to: VSFSIIVTHKVWVGHLAWVHQSI*RGQQDA
Trigger: GGCATCCTGCTGCCCTCTTCATATGCTTTGATGGAC...CCATGCCAGATGCCCAACCCAAACCTTGTGAGTTACAATGATTGAAAATGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
3UTR-3UTR GCA 90 bp AGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAGCTTAAATTGGCAGCCTTaGAACCAATGCTGTAGGCAT +
Preference number: 2 (lower is better)
Translates to: RERVKGSLQSIKAYEEGSLNWQP*NQCCRH
Trigger: ATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAA...GCTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
3UTR-3UTR CAA 90 bp GAGTACTGGGTTACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTATTATCCTGTAACTCACAAGGTTaGGGTTGGGCATCTGGCATG +
Preference number: 3 (lower is better)
Translates to: EYWVTERCLGLTVKELLSCNSQG*GWASGM
Trigger: CATGCCAGATGCCCAACCCAAACCTTGTGAGTTACA...GGATAATAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGTAACCCAGTACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
3UTR GCA 72 bp AGAAGAAAGATCTTAAATTGGCAGCCTTGCAACCAATaGTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTT +
Preference number: 3 (lower is better)
Translates to: RRKILNWQPCNQ*CRHSSERVASL
Trigger: AAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTTTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp TGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGCGGTGCTGGAGAGGCTaGGCCCTGCTTGCCGCACAG +
Preference number: 4 (lower is better)
Translates to: CNQCCRHSSERVASLGQPRCWRG*ALLAAQ
Trigger: CTGTGCGGCAAGCAGGGCCCAGCCTCTCCAGCACCG...CGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp AATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGAACGAAGGCCTGGAAGGCGGCCTaGGCCCAGCCTCGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: NAVGILQRGWLALVNRTKAWKAA*AQPRKA
Trigger: GGCTTTCCGAGGCTGGGCCCAGGCCGCCTTCCAGGC...CTTCGTTCGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp CCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAAGCCGGGGGTCCTGGCTaGGAGCCTCTAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PCNQCCRHSSERVASLGQAGGPG*EPLAPA
Trigger: AGCAGGAGCTAGAGGCTCTCAGCCAGGACCCCCGGC...TTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp CTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACGCCGGGGGTCCTGGCTaGGAGCCTCTAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LATNAVGILQRGWLALVNAGGPG*EPLAPA
Trigger: AGCAGGAGCTAGAGGCTCTCAGCCAGGACCCCCGGC...GTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp AATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGAACGAAGCTGGCTAGGCTCCGGTaGTGGAGAGGCTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: NAVGILQRGWLALVNRTKLARLR*WRGWAL
Trigger: CAGGGCCCAGCCTCTCCAGCACCGGAGCCTAGCCAG...CTTCGTTCGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp TGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGTGCGCCAGGCCTGCTTaGCCCCAAACACCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: CNQCCRHSSERVASLGQPCARPA*PQTPAR
Trigger: GCGAGCTGGTGTTTGGGGCCAAGCAGGCCTGGCGCA...CGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp GGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGTGTCCAGGAAGTAGGTaGGAGCCTGCCGCAGCGTAC +
Preference number: 4 (lower is better)
Translates to: GSLATNAVGILQRGWLALCPGSR*EPAAAY
Trigger: GTACGCTGCGGCAGGCTCTCACCTACTTCCTGGACA...CAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp TGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGGCATTGCGCCAGGCCTaGTTGGCCCCAAACACCAGC +
Preference number: 4 (lower is better)
Translates to: CNQCCRHSSERVASLGQPALRQA*LAPNTS
Trigger: GCTGGTGTTTGGGGCCAAGCAGGCCTGGCGCAATGC...CGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp CCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCCGGAAGGGTGCAATaGCAGTCCCTGGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: PCNQCCRHSSERVASLGQPGRVQ*QSLGPP
Trigger: TGGTGGGCCCAGGGACTGGCATTGCACCCTTCCGGG...TTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp AATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCGCTAGGCTCCGGTGCTaGAGAGGCTGGGCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: NWQPCNQCCRHSSERVASARLRC*RGWALL
Trigger: AAGCAGGGCCCAGCCTCTCCAGCACCGGAGCCTAGC...GCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp GCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGAGCTGGTAGGTGCCTGTaGCTGCCACCTCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: ATNAVGILQRGWLALVNRAGRCL*LPPQPP
Trigger: TGGAGGCTGAGGTGGCAGCCACAGGCACCTACCAGC...TCGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp AATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCTGCGCCAGGCCTGCTTaGCCCCAAACACCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: NWQPCNQCCRHSSERVASCARPA*PQTPAR
Trigger: GCGAGCTGGTGTTTGGGGCCAAGCAGGCCTGGCGCA...GCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp CTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACGTTTCACAGGCAGCCTaGAAGGCGGCCTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LATNAVGILQRGWLALVNVSQAA*KAAWAQ
Trigger: CTGGGCCCAGGCCGCCTTCCAGGCTGCCTGTGAAAC...GTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp GGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGCTCAGCCGGTACCTCTaGCGCTTCCAGCTGCGTTTG +
Preference number: 4 (lower is better)
Translates to: GSLATNAVGILQRGWLALLSRYL*RFQLRL
Trigger: CAAACGCAGCTGGAAGCGCCAGAGGTACCGGCTGAG...CAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp GGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGTGCAGGCTCTCAGCCTaGGTACTCAGCCGGTACCTC +
Preference number: 4 (lower is better)
Translates to: GSLATNAVGILQRGWLALCRLSA*VLSRYL
Trigger: GAGGTACCGGCTGAGTACCCAGGCTGAGAGCCTGCA...CAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp TGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGTACTGCAGTCCCTCCTaGCCTCCGGTGTCCAGACGC +
Preference number: 4 (lower is better)
Translates to: CNQCCRHSSERVASLGQPYCSPS*PPVSRR
Trigger: GCGTCTGGACACCGGAGGCCAGGAGGGACTGCAGTA...CGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp GCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGAGTGGGCGCTGGGTGCTaGACTGACAGAGTAGTACCG +
Preference number: 4 (lower is better)
Translates to: ATNAVGILQRGWLALVNRVGAGC*TDRVVP
Trigger: CGGTACTACTCTGTCAGTTCAGCACCCAGCGCCCAC...TCGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp CTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACGCCTGCCCCCTTTGCTaGACTTCCCTTCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: LATNAVGILQRGWLALVNACPLC*TSLPGV
Trigger: GACCCCTGGAAGGGAAGTGCAGCAAAGGGGGCAGGC...GTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp GGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGACAGAAGTGGGGGTATaGTCGGGAGCCCAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: GSLATNAVGILQRGWLALTEVGV*SGAQPK
Trigger: TTTGGGCTGGGCTCCCGAGCATACCCCCACTTCTGT...CAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp CCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCAAACACCCCACGCTaGTGGGCGTCCAGTACCTCG +
Preference number: 4 (lower is better)
Translates to: PCNQCCRHSSERVASLGQPNTPR*WASSTS
Trigger: CGAGGTACTGGACGCCCAGCAGCGTGGGGTGTTTGG...TTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp GCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGAGGTGGCCCAGGCTCCTaGCCCACACTCTTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: ATNAVGILQRGWLALVNRGGPGS*PTLFKL
Trigger: CAACTTGAAGAGTGTGGGCCAGGAGCCTGGGCCACC...TCGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp CCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAGCCTGGAAGGCGGCCTaGGCCCAGCCTCGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: PERELKGVYSPSKHMKRAAWKAA*AQPRKA
Trigger: GGCTTTCCGAGGCTGGGCCCAGGCCGCCTTCCAGGC...TGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp TGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGTGGATCTCTCCTGGGTaGGCGCTGGGTGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: CNQCCRHSSERVASLGQPWISPG*ALGAEL
Trigger: CAGTTCAGCACCCAGCGCCCACCCAGGAGAGATCCA...CGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp GCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGATCTCCCGCCTTGAGCTaGCTCATCCACGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: ATNAVGILQRGWLALVNRSPALS*LIHVEQ
Trigger: CTGCTCCACGTGGATGAGCCAGCTCAAGGCGGGAGA...TCGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp AATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCTCAGCTGTCGCTCCTTaGGGCTGCCAGGATCCCTGG +
Preference number: 4 (lower is better)
Translates to: NWQPCNQCCRHSSERVASSAVAP*GCQDPW
Trigger: CCAGGGATCCTGGCAGCCCCAAGGAGCGACAGCTGA...GCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp CCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCACTGGCTAGGCTCCGGTaGTGGAGAGGCTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PERELKGVYSPSKHMKRALARLR*WRGWAL
Trigger: CAGGGCCCAGCCTCTCCAGCACCGGAGCCTAGCCAG...TGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp CCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAAGATGCCTGCCCCCTTTaGTGCACTTCCCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PCNQCCRHSSERVASLGQDACPL*CTSLPG
Trigger: CCCTGGAAGGGAAGTGCAGCAAAGGGGGCAGGCATC...TTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp CTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACGATGCCTGCCCCCTTTaGTGCACTTCCCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LATNAVGILQRGWLALVNDACPL*CTSLPG
Trigger: CCCTGGAAGGGAAGTGCAGCAAAGGGGGCAGGCATC...GTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp AATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCGTCGCTCCTTGGGGCTaGCAGGATCCCTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: NWQPCNQCCRHSSERVASVAPWG*QDPWKR
Trigger: CCTTTTCCAGGGATCCTGGCAGCCCCAAGGAGCGAC...GCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp CCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAAGGTGGCCCAGGCTCCTaGCCCACACTCTTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: PCNQCCRHSSERVASLGQGGPGS*PTLFKL
Trigger: CAACTTGAAGAGTGTGGGCCAGGAGCCTGGGCCACC...TTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp AAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGTGGTGCTGGTCGGGTTaGGGACGGGGGTGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: KILNWQPCNQCCRHSSERWCWSG*GRGCWR
Trigger: GCGCCAGCACCCCCGTCCCCAACCCGACCAGCACCA...CCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp ACTCCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGTGGTGCTGGTCGGGTTaGGGACGGGGGTGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: TPERELKGVYSPSKHMKRWCWSG*GRGCWR
Trigger: GCGCCAGCACCCCCGTCCCCAACCCGACCAGCACCA...CCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp CCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAGCTGTGGTCTGGTGCTaGTCGGGTTGGGGACGGGGG +
Preference number: 4 (lower is better)
Translates to: PERELKGVYSPSKHMKRAAVVWC*SGWGRG
Trigger: CCCCCGTCCCCAACCCGACCAGCACCAGACCACAGC...TGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp AATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCCAATAGCTGCTCAGTaGGTGAAGGGCCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: NWQPCNQCCRHSSERVASPIAAQ*VKGPGW
Trigger: CCACCCAGGGCCCTTCACCCACTGAGCAGCTATTGG...GCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp GCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGACATGTTGGACACAGCTaGGAGGGCATACCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: ATNAVGILQRGWLALVNRHVGHS*EGIPAQ
Trigger: CTGCGCTGGTATGCCCTCCCAGCTGTGTCCAACATG...TCGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp CCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAATGCAGGCTCTCAGCCTaGGTACTCAGCCGGTACCTC +
Preference number: 4 (lower is better)
Translates to: PCNQCCRHSSERVASLGQCRLSA*VLSRYL
Trigger: GAGGTACCGGCTGAGTACCCAGGCTGAGAGCCTGCA...TTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp CCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAAATGTGGTCCCCTGGCTaGTACTGCAGTCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PCNQCCRHSSERVASLGQMWSPG*YCSPSW
Trigger: CCAGGAGGGACTGCAGTACCAGCCAGGGGACCACAT...TTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp AATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCGCCAGGACGGTTGGGTaGGCACACACCTATGTGGTC +
Preference number: 4 (lower is better)
Translates to: NWQPCNQCCRHSSERVASARTVG*AHTYVV
Trigger: GACCACATAGGTGTGTGCCCACCCAACCGTCCTGGC...GCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp CTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACTCTCCCGCCTTGAGCTaGCTCATCCACGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LATNAVGILQRGWLALVNSPALS*LIHVEQ
Trigger: CTGCTCCACGTGGATGAGCCAGCTCAAGGCGGGAGA...GTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp TGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGATGAAGTCCCGGGCTTaGCCCAATAGCTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: CNQCCRHSSERVASLGQPMKSRA*PNSCSV
Trigger: CACTGAGCAGCTATTGGGTCAAGCCCGGGACTTCAT...CGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp TGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGGCTGGGGGAACACTGTaGTGGCTGAACGAAGATTGC +
Preference number: 4 (lower is better)
Translates to: CNQCCRHSSERVASLGQPAGGTL*WLNEDC
Trigger: GCAATCTTCGTTCAGCCATCACAGTGTTCCCCCAGC...CGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp CTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCACCGTGCCCATGAGTaGGGCAGAGATCTTCACTGC +
Preference number: 4 (lower is better)
Translates to: LATNAVGILQRGWLALVNHRAHE*GRDLHC
Trigger: GCAGTGAAGATCTCTGCCTCACTCATGGGCACGGTG...GTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp GGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGGATACCAGTGGGTCTaGGCAGGAGACACTGTTGAA +
Preference number: 4 (lower is better)
Translates to: GSLATNAVGILQRGWLALGYQWV*AGDTVE
Trigger: TTCAACAGTGTCTCCTGCTCAGACCCACTGGTATCC...CAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp AATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGAACGAAGAGCTGCGTTTGGGGCTaGAGATATCTCGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: NAVGILQRGWLALVNRTKSCVWG*RYLGQQ
Trigger: CTGCTGCCCGAGATATCTTCAGCCCCAAACGCAGCT...CTTCGTTCGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp GCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGATTCCGCCTGTGCACGTaGGTCAGCCCTGGTAGTAAT +
Preference number: 4 (lower is better)
Translates to: ATNAVGILQRGWLALVNRFRLCT*VSPGSN
Trigger: ATTACTACCAGGGCTGACTCACGTGCACAGGCGGAA...TCGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp CCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAAGGCAGGCAGTGCCACTaGAGGAAATTGCTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: PCNQCCRHSSERVASLGQGRQCH*RKLLQH
Trigger: GTGCTGGAGCAATTTCCTTCAGTGGCACTGCCTGCC...TTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp AATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCGGCAGGCAGTGCCACTaGAGGAAATTGCTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: NWQPCNQCCRHSSERVASGRQCH*RKLLQH
Trigger: GTGCTGGAGCAATTTCCTTCAGTGGCACTGCCTGCC...GCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp CCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCAGCACAGCTATGGTaGGGTGGATCTCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: PCNQCCRHSSERVASLGQPAQLW*GGSLLG
Trigger: ACCCAGGAGAGATCCACCTCACCATAGCTGTGCTGG...TTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp AATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCGGTGCCCAGGGCTCCTaGACTGTCTGTGTTGCTAGA +
Preference number: 4 (lower is better)
Translates to: NWQPCNQCCRHSSERVASGAQGS*TVCVAR
Trigger: TCTAGCAACACAGACAGTGCAGGAGCCCTGGGCACC...GCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp CCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCATCACCTTGGCCCAGCTaGAGTAGTCGCTCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: PERELKGVYSPSKHMKRASPWPS*SSRSPP
Trigger: GGGCGGGGAGCGACTACTGCAGCTGGGCCAAGGTGA...TGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp CTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACGAGGGCCACCAGGGCTaGCTTTCTCCAGTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: LATNAVGILQRGWLALVNEGHQG*LSPVVP
Trigger: TGGAACAACTGGAGAAAGGCAGCCCTGGTGGCCCTC...GTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp AATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGAACGAAGTTCGCTGGACTCTTCTaGCAGGGTGCTGAGCAGTCG +
Preference number: 4 (lower is better)
Translates to: NAVGILQRGWLALVNRTKFAGLF*QGAEQS
Trigger: CGACTGCTCAGCACCCTGGCAGAAGAGTCCAGCGAA...CTTCGTTCGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp AGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAGCCCCGGAAGGGTGCAATaGCAGTCCCTGGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: RERVKGSLQSIKAYEEGSPGRVQ*QSLGPP
Trigger: TGGTGGGCCCAGGGACTGGCATTGCACCCTTCCGGG...GCTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp CCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACGTAGGTCTTGGGGCTaGCAGGATCCCTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: PCNQCCRHSSERVASLGQRRSWG*QDPWKR
Trigger: CCTTTTCCAGGGATCCTGGCAGCCCCAAGACCTACG...TTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR GCA 90 bp TGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGCTTCATCCAGCTCCATaGCGCCCTCTGTTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: CNQCCRHSSERVASLGQPLHPAP*RPLLPE
Trigger: TTCTGGCAACAGAGGGCGGCATGGAGCTGGATGAAG...CGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR CCA 90 bp AGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAGCGCTAGGCTCCGGTGCTaGAGAGGCTGGGCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: RERVKGSLQSIKAYEEGSARLRC*RGWALL
Trigger: AAGCAGGGCCCAGCCTCTCCAGCACCGGAGCCTAGC...GCTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp AAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGCTGTGGTCTGGTGCTaGTCGGGTTGGGGACGGGGG +
Preference number: 4 (lower is better)
Translates to: KILNWQPCNQCCRHSSERAVVWC*SGWGRG
Trigger: CCCCCGTCCCCAACCCGACCAGCACCAGACCACAGC...CCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp GCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGACTCGAGGACCATCTCTaGGGGCAGAGTGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: ATNAVGILQRGWLALVNRLEDHL*GQSEEF
Trigger: GAACTCTTCACTCTGCCCCCAGAGATGGTCCTCGAG...TCGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp CCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACATGTTGGACACAGCTaGGAGGGCATACCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: PCNQCCRHSSERVASLGQHVGHS*EGIPAQ
Trigger: CTGCGCTGGTATGCCCTCCCAGCTGTGTCCAACATG...TTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp AATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGAACGAAGCAGAGCTCATCACCTTaGCCCAGCTGCAGTAGTCGC +
Preference number: 4 (lower is better)
Translates to: NAVGILQRGWLALVNRTKQSSSP*PSCSSR
Trigger: GCGACTACTGCAGCTGGGCCAAGGTGATGAGCTCTG...CTTCGTTCGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp AGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAGCGTTTCACAGGCAGCCTaGAAGGCGGCCTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RERVKGSLQSIKAYEEGSVSQAA*KAAWAQ
Trigger: CTGGGCCCAGGCCGCCTTCCAGGCTGCCTGTGAAAC...GCTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp TGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGCTCGGGCAGCAGCTTTaGCATCTTCTCCCACACAGA +
Preference number: 4 (lower is better)
Translates to: CNQCCRHSSERVASLGQPLGQQL*HLLPHR
Trigger: TCTGTGTGGGAGAAGATGCCAAAGCTGCTGCCCGAG...CGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp GGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGAGAGGATTGTAGCCTaGAACATCTTCCGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: GSLATNAVGILQRGWLALERIVA*NIFRLC
Trigger: GCACAGGCGGAAGATGTTCCAGGCTACAATCCTCTC...CAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp CTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACACAGCTATGGTGAGGTaGATCTCTCCTGGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: LATNAVGILQRGWLALVNTAMVR*ISPGWA
Trigger: CGCCCACCCAGGAGAGATCCACCTCACCATAGCTGT...GTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp CCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAAACAGCTATGGTGAGGTaGATCTCTCCTGGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: PCNQCCRHSSERVASLGQTAMVR*ISPGWA
Trigger: CGCCCACCCAGGAGAGATCCACCTCACCATAGCTGT...TTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp AATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCGATGAAGCAGGGCACTaGATCTCCCGCCTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: NWQPCNQCCRHSSERVASDEAGH*ISRLEL
Trigger: CAGCTCAAGGCGGGAGATCCAGTGCCCTGCTTCATC...GCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp CCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAAGATGAAGCAGGGCACTaGATCTCCCGCCTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: PCNQCCRHSSERVASLGQDEAGH*ISRLEL
Trigger: CAGCTCAAGGCGGGAGATCCAGTGCCCTGCTTCATC...TTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp AATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCATGAAGTCCCGGGCTTaGCCCAATAGCTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: NWQPCNQCCRHSSERVASMKSRA*PNSCSV
Trigger: CACTGAGCAGCTATTGGGTCAAGCCCGGGACTTCAT...GCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp AATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCGTCTTTCCACAGGGATaGGGTTGTCCTGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: NWQPCNQCCRHSSERVASVFPQG*GCPGVQ
Trigger: CTGGACACCAGGACAACCTCATCCCTGTGGAAAGAC...GCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp CCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAAGGCACAGCACACGGTaGACCTCCGCGGCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: PERELKGVYSPSKHMKRARHSTR*TSAASS
Trigger: AGAGCTAGCCGCGGAGGTTCACCGTGTGCTGTGCCT...TGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR TCA 90 bp TTTGCAGAGTACTGGGTTACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTACCCGCAGCACGCCGATaGCGTCACCGGCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: FAEYWVTERCLGLTVKELPAARR*RHRLHP
Trigger: TGGATGAAGCCGGTGACGTCATCGGCGTGCTGCGGG...TAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGTAACCCAGTACTCTGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR TCA 90 bp CTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCCTGGGTGCGCAATGTaGGTCCGAAAATGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: LATNAVGILQRGWLALVNPGCAM*VRKCPR
Trigger: ACGAGGACATTTTCGGACTCACATTGCGCACCCAGG...GTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR GCA 90 bp GTCTCATTTTCAATCATTGTAACTCACAAGGTTTGGGTTGGGCATCTGGCATGGCCCGGAGCTGGTAGGTaGCTGTGGCTGCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: VSFSIIVTHKVWVGHLAWPGAGR*LWLPPQ
Trigger: CTGAGGTGGCAGCCACAGGCACCTACCAGCTCCGGG...CCATGCCAGATGCCCAACCCAAACCTTGTGAGTTACAATGATTGAAAATGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR GCA 90 bp AGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAGCGCCTGCCCCCTTTGCTaGACTTCCCTTCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: RERVKGSLQSIKAYEEGSACPLC*TSLPGV
Trigger: GACCCCTGGAAGGGAAGTGCAGCAAAGGGGGCAGGC...GCTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp TGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGCCCCATTGCCAAATGTaGTGGTCACCACCAACACCA +
Preference number: 4 (lower is better)
Translates to: CNQCCRHSSERVASLGQPPHCQM*WSPPTP
Trigger: TGGTGTTGGTGGTGACCAGCACATTTGGCAATGGGG...CGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp ACTCCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGTCCCCTGGCTGGTACTaGAGTCCCTCCTGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: TPERELKGVYSPSKHMKRSPGWY*SPSWPP
Trigger: CGGAGGCCAGGAGGGACTGCAGTACCAGCCAGGGGA...CCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp AGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAGCGAATCCCCGGAAGGGTaGAATGCCAGTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RERVKGSLQSIKAYEEGSESPEG*NASPWA
Trigger: GGCCCAGGGACTGGCATTGCACCCTTCCGGGGATTC...GCTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp GAGTACTGGGTTACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTATTATCCCGGCCAGGGCAGCGCTaGGGGAACACTGTGATGGCT +
Preference number: 4 (lower is better)
Translates to: EYWVTERCLGLTVKELLSRPGQR*GNTVMA
Trigger: AGCCATCACAGTGTTCCCCCAGCGCTGCCCTGGCCG...GGATAATAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGTAACCCAGTACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR CCA 90 bp TGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGGAGAGGATTGTAGCCTaGAACATCTTCCGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: CNQCCRHSSERVASLGQPERIVA*NIFRLC
Trigger: GCACAGGCGGAAGATGTTCCAGGCTACAATCCTCTC...CGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp CCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCATCCCAAGCAGCGTCTTaGGGTACAGGGCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: PERELKGVYSPSKHMKRASQAAS*GTGPIL
Trigger: CAGGATGGGCCCTGTACCTCAAGACGCTGCTTGGGA...TGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp AGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAGCTCCCAAGCAGCGTCTTaGGGTACAGGGCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: RERVKGSLQSIKAYEEGSSQAAS*GTGPIL
Trigger: CAGGATGGGCCCTGTACCTCAAGACGCTGCTTGGGA...GCTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp AGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAGCGTAGGTGCCTGTGGCTaGCACCTCAGCCTCCACTTC +
Preference number: 4 (lower is better)
Translates to: RERVKGSLQSIKAYEEGSVGACG*HLSLHF
Trigger: GAAGTGGAGGCTGAGGTGGCAGCCACAGGCACCTAC...GCTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp TTTGCAGAGTACTGGGTTACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTAGCATTGCGCCAGGCCTaGTTGGCCCCAAACACCAGC +
Preference number: 4 (lower is better)
Translates to: FAEYWVTERCLGLTVKELALRQA*LAPNTS
Trigger: GCTGGTGTTTGGGGCCAAGCAGGCCTGGCGCAATGC...TAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGTAACCCAGTACTCTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR GCA 90 bp TGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGCGAGCATCAAATACCTaGAGCTTTCCCCACTGGATC +
Preference number: 4 (lower is better)
Translates to: CNQCCRHSSERVASLGQPRASNT*SFPHWI
Trigger: GATCCAGTGGGGAAAGCTGCAGGTATTTGATGCTCG...CGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp CCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAAAGCCCTGGTAGTAATTaGAGGCTCTCAGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: PCNQCCRHSSERVASLGQSPGSN*RLSAWV
Trigger: TACCCAGGCTGAGAGCCTGCAATTACTACCAGGGCT...TTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp TTTGCAGAGTACTGGGTTACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTAAAAGGACCAGGGCACTaGGCCCCTCAGCTGTCGCTC +
Preference number: 4 (lower is better)
Translates to: FAEYWVTERCLGLTVKELKGPGH*APQLSL
Trigger: GAGCGACAGCTGAGGGGCGCAGTGCCCTGGTCCTTT...TAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGTAACCCAGTACTCTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR GCA 90 bp AAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGAAAGGACCAGGGCACTaGGCCCCTCAGCTGTCGCTC +
Preference number: 4 (lower is better)
Translates to: KILNWQPCNQCCRHSSERKGPGH*APQLSL
Trigger: GAGCGACAGCTGAGGGGCGCAGTGCCCTGGTCCTTT...CCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp GAGAGAAGAAAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTCGGCCAGGGCAGCGCTaGGGGAACACTGTGATGGCT +
Preference number: 4 (lower is better)
Translates to: ERRKILNWQPCNQCCRHSRPGQR*GNTVMA
Trigger: AGCCATCACAGTGTTCCCCCAGCGCTGCCCTGGCCG...AGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTTTCTTCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp AATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCAAAGCGGCCATTTCCTaGGGTCCAGCCATGTTGGAT +
Preference number: 4 (lower is better)
Translates to: NWQPCNQCCRHSSERVASKAAIS*GPAMLD
Trigger: ATCCAACATGGCTGGACCCCAGGAAATGGCCGCTTT...GCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp TGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGCAGAGCCATACAGAATaGTTGCCTTCACACGCTTCG +
Preference number: 4 (lower is better)
Translates to: CNQCCRHSSERVASLGQPQSHTE*LPSHAS
Trigger: CGAAGCGTGTGAAGGCAACCATTCTGTATGGCTCTG...CGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp AAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGTGGAGCAAGGGCAGCTaGGTGAGGATCAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: KILNWQPCNQCCRHSSERWSKGS*VRISGA
Trigger: TGCCCCGCTGATCCTCACCCAGCTGCCCTTGCTCCA...CCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp ACTCCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGTGGAGCAAGGGCAGCTaGGTGAGGATCAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: TPERELKGVYSPSKHMKRWSKGS*VRISGA
Trigger: TGCCCCGCTGATCCTCACCCAGCTGCCCTTGCTCCA...CCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp AGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAGCAGGTCTTCTTCCTGGTaGTGCCTGCCCCCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: RERVKGSLQSIKAYEEGSRSSSW*CLPPLL
Trigger: CAGCAAAGGGGGCAGGCATCACCAGGAAGAAGACCT...GCTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp GAGTACTGGGTTACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTATTATCCTGTCCAGGAAGTAGGTaGGAGCCTGCCGCAGCGTAC +
Preference number: 4 (lower is better)
Translates to: EYWVTERCLGLTVKELLSCPGSR*EPAAAY
Trigger: GTACGCTGCGGCAGGCTCTCACCTACTTCCTGGACA...GGATAATAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGTAACCCAGTACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR GCA 90 bp GCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGACACACAGGTCCCTCATaGCAATCTCTGAACTCATGT +
Preference number: 4 (lower is better)
Translates to: ATNAVGILQRGWLALVNRHTGPS*QSLNSC
Trigger: ACATGAGTTCAGAGATTGGCATGAGGGACCTGTGTG...TCGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp CCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAAGCCATACAGAATGGTTaGCTTCACACGCTTCGCCAT +
Preference number: 4 (lower is better)
Translates to: PCNQCCRHSSERVASLGQAIQNG*LHTLRH
Trigger: ATGGCGAAGCGTGTGAAGGCAACCATTCTGTATGGC...TTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp ACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTATTATCCCAACATCTTTACTCCCCTGGCTGGTACTaGAGTCCCTCCTGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: TERCLGLTVKELLSQHLYSPGWY*SPSWPP
Trigger: CGGAGGCCAGGAGGGACTGCAGTACCAGCCAGGGGA...GTAAAGATGTTGGGATAATAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR GCA 90 bp GAGTACTGGGTTACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTATTATCCAGCTCTGGGTGCGTATaGGGCTTGTCACCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: EYWVTERCLGLTVKELLSSSGCV*GLSPPG
Trigger: CCCAGGAGGTGACAAGCCGCATACGCACCCAGAGCT...GGATAATAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGTAACCCAGTACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR CCA 90 bp GTCTCATTTTCAATCATTGTAACTCACAAGGTTTGGGTTGGGCATCTGGCATGGCCAATAGCTGCTCAGTaGGTGAAGGGCCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: VSFSIIVTHKVWVGHLAWPIAAQ*VKGPGW
Trigger: CCACCCAGGGCCCTTCACCCACTGAGCAGCTATTGG...CCATGCCAGATGCCCAACCCAAACCTTGTGAGTTACAATGATTGAAAATGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR CCA 90 bp TCAATCATTGTAACTCACAAGGTTTGGGTTGGGCATCTGGCATGGTCTTTTATGTACTGCAGTCCCTCCTaGCCTCCGGTGTCCAGACGC +
Preference number: 4 (lower is better)
Translates to: SIIVTHKVWVGHLAWSFMYCSPS*PPVSRR
Trigger: GCGTCTGGACACCGGAGGCCAGGAGGGACTGCAGTA...CATAAAAGACCATGCCAGATGCCCAACCCAAACCTTGTGAGTTACAATGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR CCA 90 bp GAGTACTGGGTTACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTATTATCCATGTGGTCCCCTGGCTaGTACTGCAGTCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: EYWVTERCLGLTVKELLSMWSPG*YCSPSW
Trigger: CCAGGAGGGACTGCAGTACCAGCCAGGGGACCACAT...GGATAATAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGTAACCCAGTACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR CCA 90 bp GAGTACTGGGTTACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTATTATCCTGGATCTCTCCTGGGTaGGCGCTGGGTGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: EYWVTERCLGLTVKELLSWISPG*ALGAEL
Trigger: CAGTTCAGCACCCAGCGCCCACCCAGGAGAGATCCA...GGATAATAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGTAACCCAGTACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR CCA 90 bp CCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCACAAGTTAGGATCAGGTaGCAGCCGGAAGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PERELKGVYSPSKHMKRAQVRIR*QPEGGS
Trigger: GCTCCCTCCTTCCGGCTGCCACCTGATCCTAACTTG...TGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp GAGTACTGGGTTACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTATTATCCCTTGCACGTAGGTCTTaGGGCTGCCAGGATCCCTGG +
Preference number: 4 (lower is better)
Translates to: EYWVTERCLGLTVKELLSLARRS*GCQDPW
Trigger: CCAGGGATCCTGGCAGCCCCAAGACCTACGTGCAAG...GGATAATAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGTAACCCAGTACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR CCA 90 bp AATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGAACGAAGTGCAAAGAAAAGCTCTaGGTGCGTATGCGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: NAVGILQRGWLALVNRTKCKEKL*VRMRLV
Trigger: GACAAGCCGCATACGCACCCAGAGCTTTTCTTTGCA...CTTCGTTCGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR TCA 90 bp TGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGGGGACAGGAAATAGTTaGCCATCTCTTGATGGAAGA +
Preference number: 4 (lower is better)
Translates to: CNQCCRHSSERVASLGQPGTGNS*PSLDGR
Trigger: TCTTCCATCAAGAGATGGTCAACTATTTCCTGTCCC...CGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp GAGTACTGGGTTACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTATTATCCAGGTCTTCTTCCTGGTaGTGCCTGCCCCCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: EYWVTERCLGLTVKELLSRSSSW*CLPPLL
Trigger: CAGCAAAGGGGGCAGGCATCACCAGGAAGAAGACCT...GGATAATAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGTAACCCAGTACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR TCA 90 bp AGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAGCCCATCACCGTGCCCATaGGTGAGGCAGAGATCTTCA +
Preference number: 4 (lower is better)
Translates to: RERVKGSLQSIKAYEEGSPSPCP*VRQRSS
Trigger: TGAAGATCTCTGCCTCACTCATGGGCACGGTGATGG...GCTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp CCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAGGCCTGACATTTCCATaGGCGCTGCTGCAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: PERELKGVYSPSKHMKRAGLTFP*ALLQSS
Trigger: AGAGCTTTGCAGCAGCGCTCATGGAAATGTCAGGCC...TGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp GAGAGAAGAAAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTCGCTGGGTGCTGAACTaGCAGAGTAGTACCGGGGCT +
Preference number: 4 (lower is better)
Translates to: ERRKILNWQPCNQCCRHSRWVLN*QSSTGA
Trigger: AGCCCCGGTACTACTCTGTCAGTTCAGCACCCAGCG...AGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTTTCTTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp GAGAGAAGAAAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTGTGGGCGCTGGGTGCTaGACTGACAGAGTAGTACCG +
Preference number: 4 (lower is better)
Translates to: ERRKILNWQPCNQCCRHSVGAGC*TDRVVP
Trigger: CGGTACTACTCTGTCAGTTCAGCACCCAGCGCCCAC...AGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTTTCTTCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp AAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGCCAGCACAGCTATGGTaGGGTGGATCTCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KILNWQPCNQCCRHSSERPAQLW*GGSLLG
Trigger: ACCCAGGAGAGATCCACCTCACCATAGCTGTGCTGG...CCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp AATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCTGCTCATTTTCCAGGTaGTTCATGAAGGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: NWQPCNQCCRHSSERVASCSFSR*FMKEAV
Trigger: CACAGCCTCCTTCATGAAGCACCTGGAAAATGAGCA...GCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp CCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAATGCTCATTTTCCAGGTaGTTCATGAAGGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PCNQCCRHSSERVASLGQCSFSR*FMKEAV
Trigger: CACAGCCTCCTTCATGAAGCACCTGGAAAATGAGCA...TTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp ATTGTAACTCACAAGGTTTGGGTTGGGCATCTGGCATGGTCTTTTATGATAATTTCACCTTGGCCCAGCTaGAGTAGTCGCTCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: IVTHKVWVGHLAWSFMIISPWPS*SSRSPP
Trigger: GGGCGGGGAGCGACTACTGCAGCTGGGCCAAGGTGA...AATTATCATAAAAGACCATGCCAGATGCCCAACCCAAACCTTGTGAGTTACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR GCA 90 bp ACTCCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGAGGGCCACCAGGGCTaGCTTTCTCCAGTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: TPERELKGVYSPSKHMKREGHQG*LSPVVP
Trigger: TGGAACAACTGGAGAAAGGCAGCCCTGGTGGCCCTC...CCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp ACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTATTATCCCAACATCTTTACGAATCCCCGGAAGGGTaGAATGCCAGTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TERCLGLTVKELLSQHLYESPEG*NASPWA
Trigger: GGCCCAGGGACTGGCATTGCACCCTTCCGGGGATTC...GTAAAGATGTTGGGATAATAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR CCA 90 bp ACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTATTATCCCAACATCTTTACGCTGGTAGGTGCCTGTaGCTGCCACCTCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: TERCLGLTVKELLSQHLYAGRCL*LPPQPP
Trigger: TGGAGGCTGAGGTGGCAGCCACAGGCACCTACCAGC...GTAAAGATGTTGGGATAATAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR CCA 90 bp AGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAGCCGTGGTGGTCCACTATaGTCACTTTGGCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RERVKGSLQSIKAYEEGSRGGPL*SLWPAG
Trigger: ACCAGCTGGCCAAAGTGACCATAGTGGACCACCACG...GCTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp CCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCACGTGGTGGTCCACTATaGTCACTTTGGCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PERELKGVYSPSKHMKRARGGPL*SLWPAG
Trigger: ACCAGCTGGCCAAAGTGACCATAGTGGACCACCACG...TGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp ACTCCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGCAGGGCAGCCCCCTCTaGCCTTCTGCTCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: TPERELKGVYSPSKHMKRQGSPL*PSAHFP
Trigger: TGGAAAATGAGCAGAAGGCCAGAGGGGGCTGCCCTG...CCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp GAGAGAAGAAAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTGCAAAGGCACAGAAGTaGGGGTATGCTCGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: ERRKILNWQPCNQCCRHSAKAQK*GYAREP
Trigger: GGGCTCCCGAGCATACCCCCACTTCTGTGCCTTTGC...AGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTTTCTTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp ACTCCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGCGGAAAGCCTCCTCCTaGCCACAGAGCTCATCACCT +
Preference number: 4 (lower is better)
Translates to: TPERELKGVYSPSKHMKRRKASS*PQSSSP
Trigger: AGGTGATGAGCTCTGTGGCCAGGAGGAGGCTTTCCG...CCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp ACTCCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGCAAGTTAGGATCAGGTaGCAGCCGGAAGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: TPERELKGVYSPSKHMKRQVRIR*QPEGGS
Trigger: GCTCCCTCCTTCCGGCTGCCACCTGATCCTAACTTG...CCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp GAGAGAAGAAAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTGGATACAGAGCTCAGTaGTCTCCACGTTGGCGGGGT +
Preference number: 4 (lower is better)
Translates to: ERRKILNWQPCNQCCRHSGYRAQ*SPRWRG
Trigger: ACCCCGCCAACGTGGAGATCACTGAGCTCTGTATCC...AGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTTTCTTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp CTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACGGGACAGGAAATAGTTaGCCATCTCTTGATGGAAGA +
Preference number: 4 (lower is better)
Translates to: LATNAVGILQRGWLALVNGTGNS*PSLDGR
Trigger: TCTTCCATCAAGAGATGGTCAACTATTTCCTGTCCC...GTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp TTTGCAGAGTACTGGGTTACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTAGGCCTGACATTTCCATaGGCGCTGCTGCAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: FAEYWVTERCLGLTVKELGLTFP*ALLQSS
Trigger: AGAGCTTTGCAGCAGCGCTCATGGAAATGTCAGGCC...TAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGTAACCCAGTACTCTGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR TCA 90 bp GAGAGAAGAAAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTAGCTGCGTTTGGGGCTaGAGATATCTCGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ERRKILNWQPCNQCCRHSSCVWG*RYLGQQ
Trigger: CTGCTGCCCGAGATATCTTCAGCCCCAAACGCAGCT...AGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTTTCTTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp TTTGCAGAGTACTGGGTTACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTATTCCGCCTGTGCACGTaGGTCAGCCCTGGTAGTAAT +
Preference number: 4 (lower is better)
Translates to: FAEYWVTERCLGLTVKELFRLCT*VSPGSN
Trigger: ATTACTACCAGGGCTGACTCACGTGCACAGGCGGAA...TAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGTAACCCAGTACTCTGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR TCA 90 bp ACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTATTATCCCAACATCTTTACCGCTGGGTGCTGAACTaGCAGAGTAGTACCGGGGCT +
Preference number: 4 (lower is better)
Translates to: TERCLGLTVKELLSQHLYRWVLN*QSSTGA
Trigger: AGCCCCGGTACTACTCTGTCAGTTCAGCACCCAGCG...GTAAAGATGTTGGGATAATAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR GCA 90 bp AAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGCCGGAGGATCCCCATTaGCAAATGTGCTGGTCACCA +
Preference number: 4 (lower is better)
Translates to: KILNWQPCNQCCRHSSERPEDPH*QMCWSP
Trigger: TGGTGACCAGCACATTTGGCAATGGGGATCCTCCGG...CCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp GAGAGAAGAAAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTGGTGCCCAGGGCTCCTaGACTGTCTGTGTTGCTAGA +
Preference number: 4 (lower is better)
Translates to: ERRKILNWQPCNQCCRHSGAQGS*TVCVAR
Trigger: TCTAGCAACACAGACAGTGCAGGAGCCCTGGGCACC...AGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTTTCTTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp TCAATCATTGTAACTCACAAGGTTTGGGTTGGGCATCTGGCATGGTCTTTTATGTTCGCTGGACTCTTCTaGCAGGGTGCTGAGCAGTCG +
Preference number: 4 (lower is better)
Translates to: SIIVTHKVWVGHLAWSFMFAGLF*QGAEQS
Trigger: CGACTGCTCAGCACCCTGGCAGAAGAGTCCAGCGAA...CATAAAAGACCATGCCAGATGCCCAACCCAAACCTTGTGAGTTACAATGATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR CCA 90 bp AGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAGCAAAGCGGCCATTTCCTaGGGTCCAGCCATGTTGGAT +
Preference number: 4 (lower is better)
Translates to: RERVKGSLQSIKAYEEGSKAAIS*GPAMLD
Trigger: ATCCAACATGGCTGGACCCCAGGAAATGGCCGCTTT...GCTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp GAGAGAAGAAAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTCAGGGCAGCCCCCTCTaGCCTTCTGCTCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: ERRKILNWQPCNQCCRHSQGSPL*PSAHFP
Trigger: TGGAAAATGAGCAGAAGGCCAGAGGGGGCTGCCCTG...AGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTTTCTTCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp ACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTATTATCCCAACATCTTTACGCAAAGGCACAGAAGTaGGGGTATGCTCGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: TERCLGLTVKELLSQHLYAKAQK*GYAREP
Trigger: GGGCTCCCGAGCATACCCCCACTTCTGTGCCTTTGC...GTAAAGATGTTGGGATAATAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR CCA 90 bp GAGAGAAGAAAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTCGGAAAGCCTCCTCCTaGCCACAGAGCTCATCACCT +
Preference number: 4 (lower is better)
Translates to: ERRKILNWQPCNQCCRHSRKASS*PQSSSP
Trigger: AGGTGATGAGCTCTGTGGCCAGGAGGAGGCTTTCCG...AGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTTTCTTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp ACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTATTATCCCAACATCTTTACCTCAGCCGGTACCTCTaGCGCTTCCAGCTGCGTTTG +
Preference number: 4 (lower is better)
Translates to: TERCLGLTVKELLSQHLYLSRYL*RFQLRL
Trigger: CAAACGCAGCTGGAAGCGCCAGAGGTACCGGCTGAG...GTAAAGATGTTGGGATAATAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR TCA 90 bp GAGAGAAGAAAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTCCATCACCGTGCCCATaGGTGAGGCAGAGATCTTCA +
Preference number: 4 (lower is better)
Translates to: ERRKILNWQPCNQCCRHSPSPCP*VRQRSS
Trigger: TGAAGATCTCTGCCTCACTCATGGGCACGGTGATGG...AGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTTTCTTCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp TTTGCAGAGTACTGGGTTACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTAGGATACCAGTGGGTCTaGGCAGGAGACACTGTTGAA +
Preference number: 4 (lower is better)
Translates to: FAEYWVTERCLGLTVKELGYQWV*AGDTVE
Trigger: TTCAACAGTGTCTCCTGCTCAGACCCACTGGTATCC...TAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGTAACCCAGTACTCTGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR GCA 90 bp GGTTGGGCATCTGGCATGGTCTTTTATGATAATTTTTCAATAAATACCGGGATGGTAGGTGCCTGTGGCTaGCACCTCAGCCTCCACTTC +
Preference number: 4 (lower is better)
Translates to: GWASGMVFYDNFSINTGMVGACG*HLSLHF
Trigger: GAAGTGGAGGCTGAGGTGGCAGCCACAGGCACCTAC...CATCCCGGTATTTATTGAAAAATTATCATAAAAGACCATGCCAGATGCCCAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp AATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCGGCAGAGATCTTCACTaGATTGGCTACTTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: NWQPCNQCCRHSSERVASGRDLH*IGYFLK
Trigger: TTTAAGGAAGTAGCCAATGCAGTGAAGATCTCTGCC...GCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp TTTGCAGAGTACTGGGTTACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTAAACACCAGTGCCTCGTaGTCTAGGGACACCACATCA +
Preference number: 4 (lower is better)
Translates to: FAEYWVTERCLGLTVKELNTSAS*SRDTTS
Trigger: TGATGTGGTGTCCCTAGAGCACGAGGCACTGGTGTT...TAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGTAACCCAGTACTCTGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR GCA 90 bp AAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGAACACCAGTGCCTCGTaGTCTAGGGACACCACATCA +
Preference number: 4 (lower is better)
Translates to: KILNWQPCNQCCRHSSERNTSAS*SRDTTS
Trigger: TGATGTGGTGTCCCTAGAGCACGAGGCACTGGTGTT...CCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp GAGAGAAGAAAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTCCGGAGGATCCCCATTaGCAAATGTGCTGGTCACCA +
Preference number: 4 (lower is better)
Translates to: ERRKILNWQPCNQCCRHSPEDPH*QMCWSP
Trigger: TGGTGACCAGCACATTTGGCAATGGGGATCCTCCGG...AGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTTTCTTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp AGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAGCTTCCATGAGCGCTGCTaGAAAGCTCTCTCCATTCTC +
Preference number: 4 (lower is better)
Translates to: RERVKGSLQSIKAYEEGSFHERC*KALSIL
Trigger: GAGAATGGAGAGAGCTTTGCAGCAGCGCTCATGGAA...GCTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp ACTCCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGAGCCCTGGTAGTAATTaGAGGCTCTCAGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: TPERELKGVYSPSKHMKRSPGSN*RLSAWV
Trigger: TACCCAGGCTGAGAGCCTGCAATTACTACCAGGGCT...CCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp ACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTATTATCCCAACATCTTTACCAGAGCTCATCACCTTaGCCCAGCTGCAGTAGTCGC +
Preference number: 4 (lower is better)
Translates to: TERCLGLTVKELLSQHLYQSSSP*PSCSSR
Trigger: GCGACTACTGCAGCTGGGCCAAGGTGATGAGCTCTG...GTAAAGATGTTGGGATAATAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR CCA 90 bp GAGAGAAGAAAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTCTCGGGCAGCAGCTTTaGCATCTTCTCCCACACAGA +
Preference number: 4 (lower is better)
Translates to: ERRKILNWQPCNQCCRHSLGQQL*HLLPHR
Trigger: TCTGTGTGGGAGAAGATGCCAAAGCTGCTGCCCGAG...AGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTTTCTTCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp GGTTGGGCATCTGGCATGGTCTTTTATGATAATTTTTCAATAAATACCGGGATGGCCAGGACGGTTGGGTaGGCACACACCTATGTGGTC +
Preference number: 4 (lower is better)
Translates to: GWASGMVFYDNFSINTGMARTVG*AHTYVV
Trigger: GACCACATAGGTGTGTGCCCACCCAACCGTCCTGGC...CATCCCGGTATTTATTGAAAAATTATCATAAAAGACCATGCCAGATGCCCAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp CCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAGGTTACAGATGTAGGTaGACATTTCCTGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: PERELKGVYSPSKHMKRAGYRCR*TFPVQS
Trigger: GGACTGCACAGGAAATGTTCACCTACATCTGTAACC...TGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp GGTTGGGCATCTGGCATGGTCTTTTATGATAATTTTTCAATAAATACCGGGATGGGATACAGAGCTCAGTaGTCTCCACGTTGGCGGGGT +
Preference number: 4 (lower is better)
Translates to: GWASGMVFYDNFSINTGMGYRAQ*SPRWRG
Trigger: ACCCCGCCAACGTGGAGATCACTGAGCTCTGTATCC...CATCCCGGTATTTATTGAAAAATTATCATAAAAGACCATGCCAGATGCCCAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp GGTTGGGCATCTGGCATGGTCTTTTATGATAATTTTTCAATAAATACCGGGATGCACCGTGCCCATGAGTaGGGCAGAGATCTTCACTGC +
Preference number: 4 (lower is better)
Translates to: GWASGMVFYDNFSINTGMHRAHE*GRDLHC
Trigger: GCAGTGAAGATCTCTGCCTCACTCATGGGCACGGTG...CATCCCGGTATTTATTGAAAAATTATCATAAAAGACCATGCCAGATGCCCAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp AAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGCGAGCATCAAATACCTaGAGCTTTCCCCACTGGATC +
Preference number: 4 (lower is better)
Translates to: KILNWQPCNQCCRHSSERRASNT*SFPHWI
Trigger: GATCCAGTGGGGAAAGCTGCAGGTATTTGATGCTCG...CCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp AGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAGCTTTCCTGTGCAGTCCTaGAGTCCCGAGCATCAAATA +
Preference number: 4 (lower is better)
Translates to: RERVKGSLQSIKAYEEGSFPVQS*SPEHQI
Trigger: TATTTGATGCTCGGGACTGCAGGACTGCACAGGAAA...GCTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp CCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCACACACAGGTCCCTCATaGCAATCTCTGAACTCATGT +
Preference number: 4 (lower is better)
Translates to: PERELKGVYSPSKHMKRAHTGPS*QSLNSC
Trigger: ACATGAGTTCAGAGATTGGCATGAGGGACCTGTGTG...TGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp ATTGTAACTCACAAGGTTTGGGTTGGGCATCTGGCATGGTCTTTTATGATAATTACAGAAGTGGGGGTATaGTCGGGAGCCCAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: IVTHKVWVGHLAWSFMIITEVGV*SGAQPK
Trigger: TTTGGGCTGGGCTCCCGAGCATACCCCCACTTCTGT...AATTATCATAAAAGACCATGCCAGATGCCCAACCCAAACCTTGTGAGTTACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR TCA 90 bp GGTTGGGCATCTGGCATGGTCTTTTATGATAATTTTTCAATAAATACCGGGATGGCTGGGGGAACACTGTaGTGGCTGAACGAAGATTGC +
Preference number: 4 (lower is better)
Translates to: GWASGMVFYDNFSINTGMAGGTL*WLNEDC
Trigger: GCAATCTTCGTTCAGCCATCACAGTGTTCCCCCAGC...CATCCCGGTATTTATTGAAAAATTATCATAAAAGACCATGCCAGATGCCCAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR TCA 90 bp ATTGTAACTCACAAGGTTTGGGTTGGGCATCTGGCATGGTCTTTTATGATAATTGTCTTTCCACAGGGATaGGGTTGTCCTGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: IVTHKVWVGHLAWSFMIIVFPQG*GCPGVQ
Trigger: CTGGACACCAGGACAACCTCATCCCTGTGGAAAGAC...AATTATCATAAAAGACCATGCCAGATGCCCAACCCAAACCTTGTGAGTTACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR GCA 90 bp AAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGTTTCCTGTGCAGTCCTaGAGTCCCGAGCATCAAATA +
Preference number: 4 (lower is better)
Translates to: KILNWQPCNQCCRHSSERFPVQS*SPEHQI
Trigger: TATTTGATGCTCGGGACTGCAGGACTGCACAGGAAA...CCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp GAGAGAAGAAAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTGCCATACAGAATGGTTaGCTTCACACGCTTCGCCAT +
Preference number: 4 (lower is better)
Translates to: ERRKILNWQPCNQCCRHSAIQNG*LHTLRH
Trigger: ATGGCGAAGCGTGTGAAGGCAACCATTCTGTATGGC...AGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTTTCTTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp GAGAGAAGAAAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTCATCATACTCATCCATaGACAGGACCCGGGGATCAA +
Preference number: 4 (lower is better)
Translates to: ERRKILNWQPCNQCCRHSHHTHP*TGPGDQ
Trigger: TTGATCCCCGGGTCCTGTGCATGGATGAGTATGATG...AGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTTTCTTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp GGTTGGGCATCTGGCATGGTCTTTTATGATAATTTTTCAATAAATACCGGGATGTTGCAGGACGCTGGTTaGCATAGTGACATCGCCGCA +
Preference number: 4 (lower is better)
Translates to: GWASGMVFYDNFSINTGMLQDAG*HSDIAA
Trigger: TGCGGCGATGTCACTATGGCAACCAGCGTCCTGCAA...CATCCCGGTATTTATTGAAAAATTATCATAAAAGACCATGCCAGATGCCCAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR GCA 90 bp ACTCCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGATTAATTTCCACCGCTaGCTTGTCTTTCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: TPERELKGVYSPSKHMKRINFHR*LVFPQG
Trigger: TCCCTGTGGAAAGACAAGGCAGCGGTGGAAATTAAT...CCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp GGTTGGGCATCTGGCATGGTCTTTTATGATAATTTTTCAATAAATACCGGGATGCCCCATTGCCAAATGTaGTGGTCACCACCAACACCA +
Preference number: 4 (lower is better)
Translates to: GWASGMVFYDNFSINTGMPHCQM*WSPPTP
Trigger: TGGTGTTGGTGGTGACCAGCACATTTGGCAATGGGG...CATCCCGGTATTTATTGAAAAATTATCATAAAAGACCATGCCAGATGCCCAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CCA 90 bp ACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTATTATCCCAACATCTTTACCAGAGCCATACAGAATaGTTGCCTTCACACGCTTCG +
Preference number: 4 (lower is better)
Translates to: TERCLGLTVKELLSQHLYQSHTE*LPSHAS
Trigger: CGAAGCGTGTGAAGGCAACCATTCTGTATGGCTCTG...GTAAAGATGTTGGGATAATAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR GCA 90 bp GGTTGGGCATCTGGCATGGTCTTTTATGATAATTTTTCAATAAATACCGGGATGCATCATACTCATCCATaGACAGGACCCGGGGATCAA +
Preference number: 4 (lower is better)
Translates to: GWASGMVFYDNFSINTGMHHTHP*TGPGDQ
Trigger: TTGATCCCCGGGTCCTGTGCATGGATGAGTATGATG...CATCCCGGTATTTATTGAAAAATTATCATAAAAGACCATGCCAGATGCCCAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp GGTTGGGCATCTGGCATGGTCTTTTATGATAATTTTTCAATAAATACCGGGATGTTCCATGAGCGCTGCTaGAAAGCTCTCTCCATTCTC +
Preference number: 4 (lower is better)
Translates to: GWASGMVFYDNFSINTGMFHERC*KALSIL
Trigger: GAGAATGGAGAGAGCTTTGCAGCAGCGCTCATGGAA...CATCCCGGTATTTATTGAAAAATTATCATAAAAGACCATGCCAGATGCCCAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp ATTGTAACTCACAAGGTTTGGGTTGGGCATCTGGCATGGTCTTTTATGATAATTAAGAAAAGCTCTGGGTaGGTATGCGGCTTGTCACCT +
Preference number: 4 (lower is better)
Translates to: IVTHKVWVGHLAWSFMIIKKSSG*VCGLSP
Trigger: AGGTGACAAGCCGCATACGCACCCAGAGCTTTTCTT...AATTATCATAAAAGACCATGCCAGATGCCCAACCCAAACCTTGTGAGTTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR GCA 90 bp GAGAGAAGAAAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTGGCAGAGATCTTCACTaGATTGGCTACTTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: ERRKILNWQPCNQCCRHSGRDLH*IGYFLK
Trigger: TTTAAGGAAGTAGCCAATGCAGTGAAGATCTCTGCC...AGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTTTCTTCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR GCA 90 bp ATTGTAACTCACAAGGTTTGGGTTGGGCATCTGGCATGGTCTTTTATGATAATTATTAATTTCCACCGCTaGCTTGTCTTTCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: IVTHKVWVGHLAWSFMIIINFHR*LVFPQG
Trigger: TCCCTGTGGAAAGACAAGGCAGCGGTGGAAATTAAT...AATTATCATAAAAGACCATGCCAGATGCCCAACCCAAACCTTGTGAGTTACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
3UTR CAA 72 bp ACAAGTCTCATTTTCAATCATTGTAACTCACAAGGTTaGGGTTGGGCATCTGGCATGGTCTTTTATGATAAT +
Preference number: 4 (lower is better)
Translates to: TSLIFNHCNSQG*GWASGMVFYDN
Trigger: ATTATCATAAAAGACCATGCCAGATGCCCAACCCAAACCTTGTGAGTTACAATGATTGAAAATGAGACTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS GCA 90 bp GGTGCTGGCGCCTGGCTAGGCTCCGGTGCTGGAGAGGCTGGGCCCTaGTTGCCGCACAGCCCTAAACCCAGCCCGAGCCCTAGGCCACAG +
Preference number: 5 (lower is better)
Translates to: GAGAWLGSGAGEAGP*LPHSPKPSPSPRPQ
Trigger: CTGTGGCCTAGGGCTCGGGCTGGGTTTAGGGCTGTGCGGCAAGCAGGGCCCAGCCTCTCCAGCACCGGAGCCTAGCCAGGCGCCAGCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS GCA 90 bp GGAACCAGGTATTTCTGGGCCAGGCGGGTCAAAGGACCAGGGCACTaGGCCCCTCAGCTGTCGCTCCTTGGGGCTGCCAGGATCCCTGGA +
Preference number: 5 (lower is better)
Translates to: GTRYFWARRVKGPGH*APQLSLLGAARIPG
Trigger: TCCAGGGATCCTGGCAGCCCCAAGGAGCGACAGCTGAGGGGCGCAGTGCCCTGGTCCTTTGACCCGCCTGGCCCAGAAATACCTGGTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115090.6
CDS GCA 90 bp CCCAAACACCAGCTCGCTCTCCCGGAGCTGGTAGGTGCCTGTGGCTaGCACCTCAGCCTCCACTTCCTGAAGCCGCTGCTCATGAGCCTG +
Preference number: 5 (lower is better)
Translates to: PKHQLALPELVGACG*HLSLHFLKPLLMSL
Trigger: CAGGCTCATGAGCAGCGGCTTCAGGAAGTGGAGGCTGAGGTGGCAGCCACAGGCACCTACCAGCTCCGGGAGAGCGAGCTGGTGTTTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CCA 90 bp TGGCCCCAAACACCAGCTCGCTCTCCCGGAGCTGGTAGGTGCCTGTaGCTGCCACCTCAGCCTCCACTTCCTGAAGCCGCTGCTCATGAG +
Preference number: 5 (lower is better)
Translates to: WPQTPARSPGAGRCL*LPPQPPLPEAAAHE
Trigger: CTCATGAGCAGCGGCTTCAGGAAGTGGAGGCTGAGGTGGCAGCCACAGGCACCTACCAGCTCCGGGAGAGCGAGCTGGTGTTTGGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS TCA 90 bp CACAGCTATGGTGAGGTGGATCTCTCCTGGGTGGGCGCTGGGTGCTaGACTGACAGAGTAGTACCGGGGCTGGAGCAAGGGCAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: HSYGEVDLSWVGAGC*TDRVVPGLEQGQLG
Trigger: ACCCAGCTGCCCTTGCTCCAGCCCCGGTACTACTCTGTCAGTTCAGCACCCAGCGCCCACCCAGGAGAGATCCACCTCACCATAGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS GCA 90 bp GGAACCAGGTATTTCTGGGCCAGGCGGGTCAAAGGACCAGGGCACTaGGCCCCTCAGCTGTCGCTCCTGCAAAGAAAAGCTCTGGGTGCG +
Preference number: 5 (lower is better)
Translates to: GTRYFWARRVKGPGH*APQLSLLQRKALGA
Trigger: CGCACCCAGAGCTTTTCTTTGCAGGAGCGACAGCTGAGGGGCGCAGTGCCCTGGTCCTTTGACCCGCCTGGCCCAGAAATACCTGGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS CCA 90 bp CCCGGGCTTGACCCAATAGCTGCTCAGTGGGTGAAGGGCCCTGGGTaGGCCGGCTCTGTAACTTCCTTGGAAACACCAGGGATCCCAAGC +
Preference number: 5 (lower is better)
Translates to: PGLDPIAAQWVKGPG*AGSVTSLETPGIPS
Trigger: GCTTGGGATCCCTGGTGTTTCCAAGGAAGTTACAGAGCCGGCCCACCCAGGGCCCTTCACCCACTGAGCAGCTATTGGGTCAAGCCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS GCA 90 bp GACCCGGGGATCAAACGCCTTCCGGAAGAGTCTTCCCAGCTGCTGTaGGTAGCTCTGGGCCCGGCCAGTCTCAGAGCCATACAGAATGGT +
Preference number: 5 (lower is better)
Translates to: DPGIKRLPEESSQLL*VALGPASLRAIQNG
Trigger: ACCATTCTGTATGGCTCTGAGACTGGCCGGGCCCAGAGCTACGCACAGCAGCTGGGAAGACTCTTCCGGAAGGCGTTTGATCCCCGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CCA 90 bp CACCAGGGCTGCCTTTCTCCAGTTGTTCCACAGCCACAGGTTCTGTaGATGGCGGAGGGTCCTCCACTCGGCTCAGCAGTGCCTCCACTA +
Preference number: 5 (lower is better)
Translates to: HQGCLSPVVPQPQVL*MAEGPPLGSAVPPL
Trigger: TAGTGGAGGCACTGCTGAGCCGAGTGGAGGACCCTCCGCCATCCACAGAACCTGTGGCTGTGGAACAACTGGAGAAAGGCAGCCCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CCA 90 bp CAGGGCACTGCGCCCCTCAGCTGTCGCTCCTGCAAAGAAAAGCTCTaGGTGCGTATGCGGCTTGTCACCTCCTGGGTGCGCAATGTGAGT +
Preference number: 5 (lower is better)
Translates to: QGTAPLSCRSCKEKL*VRMRLVTSWVRNVS
Trigger: ACTCACATTGCGCACCCAGGAGGTGACAAGCCGCATACGCACCCAGAGCTTTTCTTTGCAGGAGCGACAGCTGAGGGGCGCAGTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS GCA 90 bp CCGGCTTCATCCAGCTCCATGCCGCCCTCTGTTGCCAGAATTCTCTaGACGGTTTGCAGGACGCTGGTTGCCATAGTGACATCGCCGCAG +
Preference number: 5 (lower is better)
Translates to: PASSSSMPPSVARIL*TVCRTLVAIVTSPQ
Trigger: CTGCGGCGATGTCACTATGGCAACCAGCGTCCTGCAAACCGTGCAGAGAATTCTGGCAACAGAGGGCGGCATGGAGCTGGATGAAGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS TCA 90 bp GGGTACTCAGCCGGTACCTCTGGCGCTTCCAGCTGCGTTTGGGGCTaGAGATATCTCGGGCAGCAGCTTTGGCATCTTCTCCCACACAGA +
Preference number: 5 (lower is better)
Translates to: GYSAGTSGASSCVWG*RYLGQQLWHLLPHR
Trigger: TCTGTGTGGGAGAAGATGCCAAAGCTGCTGCCCGAGATATCTTCAGCCCCAAACGCAGCTGGAAGCGCCAGAGGTACCGGCTGAGTACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS TCA 90 bp AGCTCTGGGTGCGTATGCGGCTTGTCACCTCCTGGGTGCGCAATGTaGGTCCGAAAATGTCCTCGTGGTAGCGTTGCTGATCCCGCAGCA +
Preference number: 5 (lower is better)
Translates to: SSGCVCGLSPPGCAM*VRKCPRGSVADPAA
Trigger: TGCTGCGGGATCAGCAACGCTACCACGAGGACATTTTCGGACTCACATTGCGCACCCAGGAGGTGACAAGCCGCATACGCACCCAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS GCA 90 bp GGCTACTTCCTTAAAGGTCTTCTTCCTGGTGATGCCTGCCCCCTTTaGTGCACTTCCCTTCCAGGGGTCTGGCTGGTAGCGGAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: GYFLKGLLPGDACPL*CTSLPGVWLVAEGR
Trigger: CCTGCCTTCCGCTACCAGCCAGACCCCTGGAAGGGAAGTGCAGCAAAGGGGGCAGGCATCACCAGGAAGAAGACCTTTAAGGAAGTAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS GCA 90 bp GGGGCAGGTTGTAGCCCTTTGATCTCAATGTCGTGTAGTCTGTCTTaGCAGAATCCCCGGAAGGGTGCAATGCCAGTCCCTGGGCCCACC +
Preference number: 5 (lower is better)
Translates to: GAGCSPLISMSCSLS*QNPRKGAMPVPGPT
Trigger: GGTGGGCCCAGGGACTGGCATTGCACCCTTCCGGGGATTCTGGCAAGACAGACTACACGACATTGAGATCAAAGGGCTACAACCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS GCA 90 bp GCCGATGACGTCACCGGCTTCATCCAGCTCCATGCCGCCCTCTGTTaGCAGAATTCTCTGCACGGTTTGCAGGACGCTGGTTGCCATAGT +
Preference number: 5 (lower is better)
Translates to: ADDVTGFIQLHAALC*QNSLHGLQDAGCHS
Trigger: ACTATGGCAACCAGCGTCCTGCAAACCGTGCAGAGAATTCTGGCAACAGAGGGCGGCATGGAGCTGGATGAAGCCGGTGACGTCATCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS CCA 90 bp GGTAGTAATTGCAGGCTCTCAGCCTGGGTACTCAGCCGGTACCTCTaGCGCTTCCAGCTGCGTTTGGGGCTGAAGATATCTCGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: GSNCRLSAWVLSRYL*RFQLRLGLKISRAA
Trigger: TGCTGCCCGAGATATCTTCAGCCCCAAACGCAGCTGGAAGCGCCAGAGGTACCGGCTGAGTACCCAGGCTGAGAGCCTGCAATTACTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CAA 90 bp GCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGATTGCGCCAGGCCTGCTaGGCCCCAAACACCAGCTCG +
Preference number: 5 (lower is better)
Translates to: ATNAVGILQRGWLALVNRLRQAC*APNTSS
Trigger: CGAGCTGGTGTTTGGGGCCAAGCAGGCCTGGCGCAA...TCGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS TCA 90 bp GTAGCTCTTGTGCTGCTCAGGCCTAGGGGAGCTGTTGTACGGGCCTaGCATTTCCATGAGCGCTGCTGCAAAGCTCTCTCCATTCTCCGG +
Preference number: 5 (lower is better)
Translates to: VALVLLRPRGAVVRA*HFHERCCKALSILR
Trigger: CCGGAGAATGGAGAGAGCTTTGCAGCAGCGCTCATGGAAATGTCAGGCCCGTACAACAGCTCCCCTAGGCCTGAGCAGCACAAGAGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CCA 90 bp AGCTGGCTGTTCCAGATCCGGAAGTCTCCCCGGCCAGGGCAGCGCTaGGGGAACACTGTGATGGCTGAACGAAGATTGCCTCTATTTGTT +
Preference number: 5 (lower is better)
Translates to: SWLFQIRKSPRPGQR*GNTVMAERRLPLFV
Trigger: AACAAATAGAGGCAATCTTCGTTCAGCCATCACAGTGTTCCCCCAGCGCTGCCCTGGCCGGGGAGACTTCCGGATCTGGAACAGCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CAA 90 bp AATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGAACGAAGTCAGTGATCTCCACGTaGGCGGGGTCCCCTCGCACG +
Preference number: 5 (lower is better)
Translates to: NAVGILQRGWLALVNRTKSVIST*AGSPRT
Trigger: CGTGCGAGGGGACCCCGCCAACGTGGAGATCACTGA...CTTCGTTCGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CAA 90 bp CTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACTCAGTGATCTCCACGTaGGCGGGGTCCCCTCGCACG +
Preference number: 5 (lower is better)
Translates to: LATNAVGILQRGWLALVNSVIST*AGSPRT
Trigger: CGTGCGAGGGGACCCCGCCAACGTGGAGATCACTGA...GTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS GCA 90 bp CACTGCATTGGCTACTTCCTTAAAGGTCTTCTTCCTGGTGATGCCTaGCCCCTTTGCTGCACTTCCCTTCCAGGGGTCTGGCTGGTAGCG +
Preference number: 5 (lower is better)
Translates to: HCIGYFLKGLLPGDA*PLCCTSLPGVWLVA
Trigger: CGCTACCAGCCAGACCCCTGGAAGGGAAGTGCAGCAAAGGGGGCAGGCATCACCAGGAAGAAGACCTTTAAGGAAGTAGCCAATGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS TCA 90 bp TCCACAGAGAGGATTGTAGCCTGGAACATCTTCCGCCTGTGCACGTaGGTCAGCCCTGGTAGTAATTGCAGGCTCTCAGCCTGGGTACTC +
Preference number: 5 (lower is better)
Translates to: STERIVAWNIFRLCT*VSPGSNCRLSAWVL
Trigger: GAGTACCCAGGCTGAGAGCCTGCAATTACTACCAGGGCTGACTCACGTGCACAGGCGGAAGATGTTCCAGGCTACAATCCTCTCTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS GCA 90 bp TCCAGCTCCATGCCGCCCTCTGTTGCCAGAATTCTCTGCACGGTTTaGAGGACGCTGGTTGCCATAGTGACATCGCCGCAGACAAACATA +
Preference number: 5 (lower is better)
Translates to: SSSMPPSVARILCTV*RTLVAIVTSPQTNI
Trigger: TATGTTTGTCTGCGGCGATGTCACTATGGCAACCAGCGTCCTGCAAACCGTGCAGAGAATTCTGGCAACAGAGGGCGGCATGGAGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR CAA 90 bp TGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGCGCTTCCAGCTGCGTTaGGGGCTGAAGATATCTCGG +
Preference number: 5 (lower is better)
Translates to: CNQCCRHSSERVASLGQPRFQLR*GLKISR
Trigger: CCGAGATATCTTCAGCCCCAAACGCAGCTGGAAGCG...CGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS TCA 90 bp CACGGCCACATTAATTTCCACCGCTGCCTTGTCTTTCCACAGGGATaGGGTTGTCCTGGTGTCCAGATCCATGCACACAGCCACATCCTC +
Preference number: 5 (lower is better)
Translates to: HGHINFHRCLVFPQG*GCPGVQIHAHSHIL
Trigger: GAGGATGTGGCTGTGTGCATGGATCTGGACACCAGGACAACCTCATCCCTGTGGAAAGACAAGGCAGCGGTGGAAATTAATGTGGCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CAA 90 bp AATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGAACGAAGATCCCAAGCAGCGTCTaGAGGTACAGGGCCCATCCT +
Preference number: 5 (lower is better)
Translates to: NAVGILQRGWLALVNRTKIPSSV*RYRAHP
Trigger: AGGATGGGCCCTGTACCTCAAGACGCTGCTTGGGAT...CTTCGTTCGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CAA 90 bp CCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAATCCGGAGGATCCCCATaGCCAAATGTGCTGGTCACC +
Preference number: 5 (lower is better)
Translates to: PCNQCCRHSSERVASLGQSGGSP*PNVLVT
Trigger: GGTGACCAGCACATTTGGCAATGGGGATCCTCCGGA...TTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CAA 90 bp CTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCTAGACTCCTTCCTCTaGCGCCGCCAAGAGGATACC +
Preference number: 5 (lower is better)
Translates to: LATNAVGILQRGWLALVNLDSFL*RRQEDT
Trigger: GGTATCCTCTTGGCGGCGCAAGAGGAAGGAGTCTAG...GTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CAA 90 bp AATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCGCTTCCAGCTGCGTTaGGGGCTGAAGATATCTCGG +
Preference number: 5 (lower is better)
Translates to: NWQPCNQCCRHSSERVASRFQLR*GLKISR
Trigger: CCGAGATATCTTCAGCCCCAAACGCAGCTGGAAGCG...GCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CAA 90 bp GCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGAGTAGAGATGGTCCAGTaGGGAGCATCGGCAGCCAAA +
Preference number: 5 (lower is better)
Translates to: ATNAVGILQRGWLALVNRVEMVQ*GASAAK
Trigger: TTTGGCTGCCGATGCTCCCAACTGGACCATCTCTAC...TCGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CAA 90 bp AATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCAAAGGCGGTGAGGACTaGTCCAAACACCCCACGCTG +
Preference number: 5 (lower is better)
Translates to: NWQPCNQCCRHSSERVASKGGED*SKHPTL
Trigger: CAGCGTGGGGTGTTTGGACAAGTCCTCACCGCCTTT...GCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS GCA 90 bp GCCCTCTGTTGCCAGAATTCTCTGCACGGTTTGCAGGACGCTGGTTaGCATAGTGACATCGCCGCAGACAAACATATGTCCTTGCTCAAG +
Preference number: 5 (lower is better)
Translates to: ALCCQNSLHGLQDAG*HSDIAADKHMSLLK
Trigger: CTTGAGCAAGGACATATGTTTGTCTGCGGCGATGTCACTATGGCAACCAGCGTCCTGCAAACCGTGCAGAGAATTCTGGCAACAGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR CAA 90 bp GCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCGAGGCTCTGTAACTTCCTaGGAAACACCAGGGATCCCA +
Preference number: 5 (lower is better)
Translates to: ATNAVGILQRGWLALVNRGSVTS*ETPGIP
Trigger: TGGGATCCCTGGTGTTTCCAAGGAAGTTACAGAGCC...TCGGTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CAA 90 bp TTTGCAGAGTACTGGGTTACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTAGTCCTCGTGGTAGCGTaGCTGATCCCGCAGCACGCC +
Preference number: 5 (lower is better)
Translates to: FAEYWVTERCLGLTVKELVLVVA*LIPQHA
Trigger: GGCGTGCTGCGGGATCAGCAACGCTACCACGAGGAC...TAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGTAACCCAGTACTCTGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS TCA 90 bp GAAGTCTCCCCGGCCAGGGCAGCGCTGGGGGAACACTGTGATGGCTaGACGAAGATTGCCTCTATTTGTTGCGTATTTAATGTGGTTACA +
Preference number: 5 (lower is better)
Translates to: EVSPARAALGEHCDG*TKIASICCVFNVVT
Trigger: TGTAACCACATTAAATACGCAACAAATAGAGGCAATCTTCGTTCAGCCATCACAGTGTTCCCCCAGCGCTGCCCTGGCCGGGGAGACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CAA 90 bp CTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACATTTCTAGCAGCATGTaGGACACAGCTGGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: LATNAVGILQRGWLALVNISSSM*DTAGRA
Trigger: TGCCCTCCCAGCTGTGTCCAACATGCTGCTAGAAAT...GTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CAA 90 bp AGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAGCGGCCTAGGGGAGCTGTaGTACGGGCCTGACATTTCC +
Preference number: 5 (lower is better)
Translates to: RERVKGSLQSIKAYEEGSGLGEL*YGPDIS
Trigger: GGAAATGTCAGGCCCGTACAACAGCTCCCCTAGGCC...GCTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CAA 90 bp CTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCCTTGGTCAACCCTGCACTGTCTGTGTaGCTAGACTCCTTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: LATNAVGILQRGWLALVNPALSV*LDSFLL
Trigger: CAAGAGGAAGGAGTCTAGCAACACAGACAGTGCAGG...GTTGACCAAGGCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS TCA 90 bp CAGAATGGTTGCCTTCACACGCTTCGCCATCACCGTGCCCATGAGTaGGGCAGAGATCTTCACTGCATTGGCTACTTCCTTAAAGGTCTT +
Preference number: 5 (lower is better)
Translates to: QNGCLHTLRHHRAHE*GRDLHCIGYFLKGL
Trigger: AAGACCTTTAAGGAAGTAGCCAATGCAGTGAAGATCTCTGCCTCACTCATGGGCACGGTGATGGCGAAGCGTGTGAAGGCAACCATTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CAA 90 bp AATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGTGGCTAGCGACAAACATATGTCCTaGCTCAAGGCACAGCACACG +
Preference number: 5 (lower is better)
Translates to: NWQPCNQCCRHSSERVASDKHMS*LKAQHT
Trigger: CGTGTGCTGTGCCTTGAGCAAGGACATATGTTTGTC...GCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR CAA 90 bp ACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTATTATCCCAACATCTTTACGGGTGCGTATGCGGCTaGTCACCTCCTGGGTGCGCA +
Preference number: 5 (lower is better)
Translates to: TERCLGLTVKELLSQHLYGCVCG*SPPGCA
Trigger: TGCGCACCCAGGAGGTGACAAGCCGCATACGCACCC...GTAAAGATGTTGGGATAATAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR CAA 90 bp TTTGCAGAGTACTGGGTTACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTAATCCCAAGCAGCGTCTaGAGGTACAGGGCCCATCCT +
Preference number: 5 (lower is better)
Translates to: FAEYWVTERCLGLTVKELIPSSV*RYRAHP
Trigger: AGGATGGGCCCTGTACCTCAAGACGCTGCTTGGGAT...TAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGTAACCCAGTACTCTGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR CAA 90 bp GAGTACTGGGTTACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTATTATCCTCCGGAGGATCCCCATaGCCAAATGTGCTGGTCACC +
Preference number: 5 (lower is better)
Translates to: EYWVTERCLGLTVKELLSSGGSP*PNVLVT
Trigger: GGTGACCAGCACATTTGGCAATGGGGATCCTCCGGA...GGATAATAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGTAACCCAGTACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR CAA 90 bp AAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGCTAGACTCCTTCCTCTaGCGCCGCCAAGAGGATACC +
Preference number: 5 (lower is better)
Translates to: KILNWQPCNQCCRHSSERLDSFL*RRQEDT
Trigger: GGTATCCTCTTGGCGGCGCAAGAGGAAGGAGTCTAG...CCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CAA 90 bp AGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAGCGCTGCCTTTCTCCAGTaGTTCCACAGCCACAGGTTC +
Preference number: 5 (lower is better)
Translates to: RERVKGSLQSIKAYEEGSAAFLQ*FHSHRF
Trigger: GAACCTGTGGCTGTGGAACAACTGGAGAAAGGCAGC...GCTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CAA 90 bp TTTGCAGAGTACTGGGTTACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTAAAAGGCGGTGAGGACTaGTCCAAACACCCCACGCTG +
Preference number: 5 (lower is better)
Translates to: FAEYWVTERCLGLTVKELKGGED*SKHPTL
Trigger: CAGCGTGGGGTGTTTGGACAAGTCCTCACCGCCTTT...TAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGTAACCCAGTACTCTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR CAA 90 bp ACTCCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGTGTCCTCAGGAGGTCTaGCACGTAGGTCTTGGGGCT +
Preference number: 5 (lower is better)
Translates to: TPERELKGVYSPSKHMKRCPQEV*HVGLGA
Trigger: AGCCCCAAGACCTACGTGCAAGACCTCCTGAGGACA...CCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR CAA 90 bp GAGAGAAGAAAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTCCATGCCGCCCTCTGTaGCCAGAATTCTCTGCACGG +
Preference number: 5 (lower is better)
Translates to: ERRKILNWQPCNQCCRHSPCRPL*PEFSAR
Trigger: CCGTGCAGAGAATTCTGGCAACAGAGGGCGGCATGG...AGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTTTCTTCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR CAA 90 bp AAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGTCCACAGGGATGAGGTaGTCCTGGTGTCCAGATCCA +
Preference number: 5 (lower is better)
Translates to: KILNWQPCNQCCRHSSERSTGMR*SWCPDP
Trigger: TGGATCTGGACACCAGGACAACCTCATCCCTGTGGA...CCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CAA 90 bp CCAGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAAGCCATACAGAATGGTaGCCTTCACACGCTTCGCCA +
Preference number: 5 (lower is better)
Translates to: PERELKGVYSPSKHMKRASHTEW*PSHASP
Trigger: TGGCGAAGCGTGTGAAGGCAACCATTCTGTATGGCT...TGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CAA 90 bp AGAGAGAGAGTTAAAGGGAGTCTACAGTCCATCAAAGCATATGAAGAGGGCAGCCCTGCACTGTCTGTGTaGCTAGACTCCTTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: RERVKGSLQSIKAYEEGSPALSV*LDSFLL
Trigger: CAAGAGGAAGGAGTCTAGCAACACAGACAGTGCAGG...GCTGCCCTCTTCATATGCTTTGATGGACTGTAGACTCCCTTTAACTCTCTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CAA 90 bp AAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGGCTGCCTTTCTCCAGTaGTTCCACAGCCACAGGTTC +
Preference number: 5 (lower is better)
Translates to: KILNWQPCNQCCRHSSERAAFLQ*FHSHRF
Trigger: GAACCTGTGGCTGTGGAACAACTGGAGAAAGGCAGC...CCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CAA 90 bp TTTGCAGAGTACTGGGTTACAGAGAGGTGTCTGGGACTCACTGTCAAAGAATTAGTAGAGATGGTCCAGTaGGGAGCATCGGCAGCCAAA +
Preference number: 5 (lower is better)
Translates to: FAEYWVTERCLGLTVKELVEMVQ*GASAAK
Trigger: TTTGGCTGCCGATGCTCCCAACTGGACCATCTCTAC...TAATTCTTTGACAGTGAGTCCCAGACACCTCTCTGTAACCCAGTACTCTGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR CAA 90 bp AAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGATTTCTAGCAGCATGTaGGACACAGCTGGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: KILNWQPCNQCCRHSSERISSSM*DTAGRA
Trigger: TGCCCTCCCAGCTGTGTCCAACATGCTGCTAGAAAT...CCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CAA 90 bp AAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTTCAGAGAGGATTTCCACCGCTGCCTaGTCTTTCCACAGGGATGAG +
Preference number: 5 (lower is better)
Translates to: KILNWQPCNQCCRHSSERISTAA*SFHRDE
Trigger: CTCATCCCTGTGGAAAGACAAGGCAGCGGTGGAAAT...CCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CAA 90 bp TCAATCATTGTAACTCACAAGGTTTGGGTTGGGCATCTGGCATGGTCTTTTATGGGCTCTGTAACTTCCTaGGAAACACCAGGGATCCCA +
Preference number: 5 (lower is better)
Translates to: SIIVTHKVWVGHLAWSFMGSVTS*ETPGIP
Trigger: TGGGATCCCTGGTGTTTCCAAGGAAGTTACAGAGCC...CATAAAAGACCATGCCAGATGCCCAACCCAAACCTTGTGAGTTACAATGATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR CAA 90 bp GAGAGAAGAAAGATCTTAAATTGGCAGCCTTGCAACCAATGCTGTAGGCATTCTATTTCCACCGCTGCCTaGTCTTTCCACAGGGATGAG +
Preference number: 5 (lower is better)
Translates to: ERRKILNWQPCNQCCRHSISTAA*SFHRDE
Trigger: CTCATCCCTGTGGAAAGACAAGGCAGCGGTGGAAAT...AGAATGCCTACAGCATTGGTTGCAAGGCTGCCAATTTAAGATCTTTCTTCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS-3UTR CAA 90 bp TCAATCATTGTAACTCACAAGGTTTGGGTTGGGCATCTGGCATGGTCTTTTATGAGCCATACAGAATGGTaGCCTTCACACGCTTCGCCA +
Preference number: 5 (lower is better)
Translates to: SIIVTHKVWVGHLAWSFMSHTEW*PSHASP
Trigger: TGGCGAAGCGTGTGAAGGCAACCATTCTGTATGGCT...CATAAAAGACCATGCCAGATGCCCAACCCAAACCTTGTGAGTTACAATGATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS-3UTR CAA 90 bp GGTTGGGCATCTGGCATGGTCTTTTATGATAATTTTTCAATAAATACCGGGATGTCCACAGGGATGAGGTaGTCCTGGTGTCCAGATCCA +
Preference number: 5 (lower is better)
Translates to: GWASGMVFYDNFSINTGMSTGMR*SWCPDP
Trigger: TGGATCTGGACACCAGGACAACCTCATCCCTGTGGA...CATCCCGGTATTTATTGAAAAATTATCATAAAAGACCATGCCAGATGCCCAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS GCA 72 bp GCTGTGGTCTGGTGCTGGTCGGGTTGGGGACGGGGGTaGTGGCGCCTGGCTAGGCTCCGGTGCTGGAGAGGC +
Preference number: 6 (lower is better)
Translates to: AVVWCWSGWGRG*WRLARLRCWRG
Trigger: GCCTCTCCAGCACCGGAGCCTAGCCAGGCGCCAGCACCCCCGTCCCCAACCCGACCAGCACCAGACCACAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CCA 72 bp GTGGTCTGGTGCTGGTCGGGTTGGGGACGGGGGTGCTaGCGCCTGGCTAGGCTCCGGTGCTGGAGAGGCTGG +
Preference number: 6 (lower is better)
Translates to: VVWCWSGWGRGC*RLARLRCWRGW
Trigger: CCAGCCTCTCCAGCACCGGAGCCTAGCCAGGCGCCAGCACCCCCGTCCCCAACCCGACCAGCACCAGACCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CAA 90 bp GCTGGCGCCTGGCTAGGCTCCGGTGCTGGAGAGGCTGGGCCCTGCTaGCCGCACAGCCCTAAACCCAGCCCGAGCCCTAGGCCACAGGGT +
Preference number: 6 (lower is better)
Translates to: AGAWLGSGAGEAGPC*PHSPKPSPSPRPQG
Trigger: ACCCTGTGGCCTAGGGCTCGGGCTGGGTTTAGGGCTGTGCGGCAAGCAGGGCCCAGCCTCTCCAGCACCGGAGCCTAGCCAGGCGCCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CAA 72 bp TGGCTAGGCTCCGGTGCTGGAGAGGCTGGGCCCTGCTaGCCGCACAGCCCTAAACCCAGCCCGAGCCCTAGG +
Preference number: 6 (lower is better)
Translates to: WLGSGAGEAGPC*PHSPKPSPSPR
Trigger: CCTAGGGCTCGGGCTGGGTTTAGGGCTGTGCGGCAAGCAGGGCCCAGCCTCTCCAGCACCGGAGCCTAGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS TCA 72 bp CCTCGTGGTAGCGTTGCTGATCCCGCAGCACGCCGATaGCGTCACCGGCTTCATCCAGCTCCATGCCGCCCT +
Preference number: 6 (lower is better)
Translates to: PRGSVADPAARR*RHRLHPAPCRP
Trigger: AGGGCGGCATGGAGCTGGATGAAGCCGGTGACGTCATCGGCGTGCTGCGGGATCAGCAACGCTACCACGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS CCA 72 bp ACACAGAAGGTTTCACAGGCAGCCTGGAAGGCGGCCTaGGCCCAGCCTCGGAAAGCCTCCTCCTGGCCACAG +
Preference number: 6 (lower is better)
Translates to: TQKVSQAAWKAA*AQPRKASSWPQ
Trigger: CTGTGGCCAGGAGGAGGCTTTCCGAGGCTGGGCCCAGGCCGCCTTCCAGGCTGCCTGTGAAACCTTCTGTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CCA 72 bp CGGTTGGGTGGGCACACACCTATGTGGTCCCCTGGCTaGTACTGCAGTCCCTCCTGGCCTCCGGTGTCCAGA +
Preference number: 6 (lower is better)
Translates to: RLGGHTPMWSPG*YCSPSWPPVSR
Trigger: TCTGGACACCGGAGGCCAGGAGGGACTGCAGTACCAGCCAGGGGACCACATAGGTGTGTGCCCACCCAACCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CCA 72 bp CTCGGCTCAGCAGTGCCTCCACTAGGCCAGGACGGTTaGGTGGGCACACACCTATGTGGTCCCCTGGCTGGT +
Preference number: 6 (lower is better)
Translates to: LGSAVPPLGQDG*VGTHLCGPLAG
Trigger: ACCAGCCAGGGGACCACATAGGTGTGTGCCCACCCAACCGTCCTGGCCTAGTGGAGGCACTGCTGAGCCGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CAA 72 bp GCTGCAGTAGTCGCTCCCCGCCCAGCTCCTCCAGCCTaGTGTCCACCGCTCGAGCAAAGGCACAGAAGTGGG +
Preference number: 6 (lower is better)
Translates to: AAVVAPRPAPPA*CPPLEQRHRSG
Trigger: CCCACTTCTGTGCCTTTGCTCGAGCGGTGGACACAAGGCTGGAGGAGCTGGGCGGGGAGCGACTACTGCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CAA 72 bp ACTCGGCTCAGCAGTGCCTCCACTAGGCCAGGACGGTaGGGTGGGCACACACCTATGTGGTCCCCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: TRLSSASTRPGR*GGHTPMWSPGW
Trigger: CCAGCCAGGGGACCACATAGGTGTGTGCCCACCCAACCGTCCTGGCCTAGTGGAGGCACTGCTGAGCCGAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CAA 90 bp CTTGGCCCAGCTGCAGTAGTCGCTCCCCGCCCAGCTCCTCCAGCCTaGTGTCCACCGCTCGAGCAAAGGCACAGAAGTGGGGGTATGCTC +
Preference number: 6 (lower is better)
Translates to: LGPAAVVAPRPAPPA*CPPLEQRHRSGGML
Trigger: GAGCATACCCCCACTTCTGTGCCTTTGCTCGAGCGGTGGACACAAGGCTGGAGGAGCTGGGCGGGGAGCGACTACTGCAGCTGGGCCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS TCA 72 bp GGTGGATCTCTCCTGGGTGGGCGCTGGGTGCTGAACTaGCAGAGTAGTACCGGGGCTGGAGCAAGGGCAGCT +
Preference number: 6 (lower is better)
Translates to: GGSLLGGRWVLN*QSSTGAGARAA
Trigger: AGCTGCCCTTGCTCCAGCCCCGGTACTACTCTGTCAGTTCAGCACCCAGCGCCCACCCAGGAGAGATCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS TCA 72 bp GGTGAGGTGGATCTCTCCTGGGTGGGCGCTGGGTGCTaGACTGACAGAGTAGTACCGGGGCTGGAGCAAGGG +
Preference number: 6 (lower is better)
Translates to: GEVDLSWVGAGC*TDRVVPGLEQG
Trigger: CCCTTGCTCCAGCCCCGGTACTACTCTGTCAGTTCAGCACCCAGCGCCCACCCAGGAGAGATCCACCTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CCA 72 bp GCGCCCCTCAGCTGTCGCTCCTGCAAAGAAAAGCTCTaGGTGCGTATGCGGCTTGTCACCTCCTGGGTGCGC +
Preference number: 6 (lower is better)
Translates to: APLSCRSCKEKL*VRMRLVTSWVR
Trigger: GCGCACCCAGGAGGTGACAAGCCGCATACGCACCCAGAGCTTTTCTTTGCAGGAGCGACAGCTGAGGGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS CAA 90 bp GCTCAGTGGGTGAAGGGCCCTGGGTGGGCCGGCTCTGTAACTTCCTaGGAAACACCAGGGATCCCAAGCAGCGTCTTGAGGTACAGGGCC +
Preference number: 6 (lower is better)
Translates to: AQWVKGPGWAGSVTS*ETPGIPSSVLRYRA
Trigger: GGCCCTGTACCTCAAGACGCTGCTTGGGATCCCTGGTGTTTCCAAGGAAGTTACAGAGCCGGCCCACCCAGGGCCCTTCACCCACTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS TCA 72 bp GCCCATCCTGGGTTCTGTAAGCCAGCACAGCTATGGTaGGGTGGATCTCTCCTGGGTGGGCGCTGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: AHPGFCKPAQLW*GGSLLGGRWVL
Trigger: CAGCACCCAGCGCCCACCCAGGAGAGATCCACCTCACCATAGCTGTGCTGGCTTACAGAACCCAGGATGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CAA 72 bp CAGCCATGTTGGATACAGAGCTCAGTGATCTCCACGTaGGCGGGGTCCCCTCGCACGGAGCCATCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: QPCWIQSSVIST*AGSPRTEPSCC
Trigger: GCAGCAGGATGGCTCCGTGCGAGGGGACCCCGCCAACGTGGAGATCACTGAGCTCTGTATCCAACATGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CCA 72 bp GACCCAATAGCTGCTCAGTGGGTGAAGGGCCCTGGGTaGGCCGGCTCTGTAACTTCCTTGGAAACACCAGGG +
Preference number: 6 (lower is better)
Translates to: DPIAAQWVKGPG*AGSVTSLETPG
Trigger: CCCTGGTGTTTCCAAGGAAGTTACAGAGCCGGCCCACCCAGGGCCCTTCACCCACTGAGCAGCTATTGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CCA 72 bp TTCCAGATCCGGAAGTCTCCCCGGCCAGGGCAGCGCTaGGGGAACACTGTGATGGCTGAACGAAGATTGCCT +
Preference number: 6 (lower is better)
Translates to: FQIRKSPRPGQR*GNTVMAERRLP
Trigger: AGGCAATCTTCGTTCAGCCATCACAGTGTTCCCCCAGCGCTGCCCTGGCCGGGGAGACTTCCGGATCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CCA 72 bp AGCTCTGGGCCCGGCCAGTCTCAGAGCCATACAGAATaGTTGCCTTCACACGCTTCGCCATCACCGTGCCCA +
Preference number: 6 (lower is better)
Translates to: SSGPGQSQSHTE*LPSHASPSPCP
Trigger: TGGGCACGGTGATGGCGAAGCGTGTGAAGGCAACCATTCTGTATGGCTCTGAGACTGGCCGGGCCCAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CCA 72 bp CCTCCTGGCCTCCGGTGTCCAGACGCACCAGGATCGTaGCTCGGGTGGATTTGCTGCTCTGTAGGTTTTCCA +
Preference number: 6 (lower is better)
Translates to: PPGLRCPDAPGS*LGWICCSVGFP
Trigger: TGGAAAACCTACAGAGCAGCAAATCCACCCGAGCCACGATCCTGGTGCGTCTGGACACCGGAGGCCAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CAA 72 bp GTGAAGGGCCCTGGGTGGGCCGGCTCTGTAACTTCCTaGGAAACACCAGGGATCCCAAGCAGCGTCTTGAGG +
Preference number: 6 (lower is better)
Translates to: VKGPGWAGSVTS*ETPGIPSSVLR
Trigger: CCTCAAGACGCTGCTTGGGATCCCTGGTGTTTCCAAGGAAGTTACAGAGCCGGCCCACCCAGGGCCCTTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CAA 72 bp CGTCACCGGCTTCATCCAGCTCCATGCCGCCCTCTGTaGCCAGAATTCTCTGCACGGTTTGCAGGACGCTGG +
Preference number: 6 (lower is better)
Translates to: RHRLHPAPCRPL*PEFSARFAGRW
Trigger: CCAGCGTCCTGCAAACCGTGCAGAGAATTCTGGCAACAGAGGGCGGCATGGAGCTGGATGAAGCCGGTGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS CAA 90 bp GTGCCCAGGGCTCCTGCACTGTCTGTGTTGCTAGACTCCTTCCTCTaGCGCCGCCAAGAGGATACCAGTGGGTCTGAGCAGGAGACACTG +
Preference number: 6 (lower is better)
Translates to: VPRAPALSVLLDSFL*RRQEDTSGSEQETL
Trigger: CAGTGTCTCCTGCTCAGACCCACTGGTATCCTCTTGGCGGCGCAAGAGGAAGGAGTCTAGCAACACAGACAGTGCAGGAGCCCTGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS TCA 72 bp GTGCTGCTCAGGCCTAGGGGAGCTGTTGTACGGGCCTaGCATTTCCATGAGCGCTGCTGCAAAGCTCTCTCC +
Preference number: 6 (lower is better)
Translates to: VLLRPRGAVVRA*HFHERCCKALS
Trigger: GGAGAGAGCTTTGCAGCAGCGCTCATGGAAATGTCAGGCCCGTACAACAGCTCCCCTAGGCCTGAGCAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS TCA 72 bp GCCGGTACCTCTGGCGCTTCCAGCTGCGTTTGGGGCTaGAGATATCTCGGGCAGCAGCTTTGGCATCTTCTC +
Preference number: 6 (lower is better)
Translates to: AGTSGASSCVWG*RYLGQQLWHLL
Trigger: GAGAAGATGCCAAAGCTGCTGCCCGAGATATCTTCAGCCCCAAACGCAGCTGGAAGCGCCAGAGGTACCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS TCA 72 bp ACCACTTCCATTCTTCGTAGCGCCGGGGGTCCTGGCTaGGAGCCTCTAGCTCCTGCTGTTCGCTGGACTCTT +
Preference number: 6 (lower is better)
Translates to: TTSILRSAGGPG*EPLAPAVRWTL
Trigger: AAGAGTCCAGCGAACAGCAGGAGCTAGAGGCTCTCAGCCAGGACCCCCGGCGCTACGAAGAATGGAAGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS GCA 72 bp ATCAAACGCCTTCCGGAAGAGTCTTCCCAGCTGCTGTaGGTAGCTCTGGGCCCGGCCAGTCTCAGAGCCATA +
Preference number: 6 (lower is better)
Translates to: IKRLPEESSQLL*VALGPASLRAI
Trigger: TATGGCTCTGAGACTGGCCGGGCCCAGAGCTACGCACAGCAGCTGGGAAGACTCTTCCGGAAGGCGTTTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS GCA 72 bp AGGATCAGCGGGGCAGGCAGTGCCACTGAAGGAAATTaGTCCAGCACCTCTAGCAGTGTGGGGCAGCTGAAC +
Preference number: 6 (lower is better)
Translates to: RISGAGSATEGN*SSTSSSVGQLN
Trigger: GTTCAGCTGCCCCACACTGCTAGAGGTGCTGGAGCAATTTCCTTCAGTGGCACTGCCTGCCCCGCTGATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS GCA 72 bp GTCACCGGCTTCATCCAGCTCCATGCCGCCCTCTGTTaGCAGAATTCTCTGCACGGTTTGCAGGACGCTGGT +
Preference number: 6 (lower is better)
Translates to: VTGFIQLHAALC*QNSLHGLQDAG
Trigger: ACCAGCGTCCTGCAAACCGTGCAGAGAATTCTGGCAACAGAGGGCGGCATGGAGCTGGATGAAGCCGGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS GCA 72 bp TATTTCTGGGCCAGGCGGGTCAAAGGACCAGGGCACTaGGCCCCTCAGCTGTCGCTCCTGCAAAGAAAAGCT +
Preference number: 6 (lower is better)
Translates to: YFWARRVKGPGH*APQLSLLQRKA
Trigger: AGCTTTTCTTTGCAGGAGCGACAGCTGAGGGGCGCAGTGCCCTGGTCCTTTGACCCGCCTGGCCCAGAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS CCA 72 bp TGCAGGCTCTCAGCCTGGGTACTCAGCCGGTACCTCTaGCGCTTCCAGCTGCGTTTGGGGCTGAAGATATCT +
Preference number: 6 (lower is better)
Translates to: CRLSAWVLSRYL*RFQLRLGLKIS
Trigger: AGATATCTTCAGCCCCAAACGCAGCTGGAAGCGCCAGAGGTACCGGCTGAGTACCCAGGCTGAGAGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CCA 72 bp TGCCTTTCTCCAGTTGTTCCACAGCCACAGGTTCTGTaGATGGCGGAGGGTCCTCCACTCGGCTCAGCAGTG +
Preference number: 6 (lower is better)
Translates to: CLSPVVPQPQVL*MAEGPPLGSAV
Trigger: CACTGCTGAGCCGAGTGGAGGACCCTCCGCCATCCACAGAACCTGTGGCTGTGGAACAACTGGAGAAAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CAA 72 bp ACTTCCTTGGAAACACCAGGGATCCCAAGCAGCGTCTaGAGGTACAGGGCCCATCCTGCTGAGCCTGGGCAC +
Preference number: 6 (lower is better)
Translates to: TSLETPGIPSSV*RYRAHPAEPGH
Trigger: GTGCCCAGGCTCAGCAGGATGGGCCCTGTACCTCAAGACGCTGCTTGGGATCCCTGGTGTTTCCAAGGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CAA 72 bp AACCTGAGGGTGCCCAGGGCTCCTGCACTGTCTGTGTaGCTAGACTCCTTCCTCTTGCGCCGCCAAGAGGAT +
Preference number: 6 (lower is better)
Translates to: NLRVPRAPALSV*LDSFLLRRQED
Trigger: ATCCTCTTGGCGGCGCAAGAGGAAGGAGTCTAGCAACACAGACAGTGCAGGAGCCCTGGGCACCCTCAGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CAA 72 bp GTACTCAGCCGGTACCTCTGGCGCTTCCAGCTGCGTTaGGGGCTGAAGATATCTCGGGCAGCAGCTTTGGCA +
Preference number: 6 (lower is better)
Translates to: VLSRYLWRFQLR*GLKISRAAALA
Trigger: TGCCAAAGCTGCTGCCCGAGATATCTTCAGCCCCAAACGCAGCTGGAAGCGCCAGAGGTACCGGCTGAGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CAA 90 bp AACACACAGAACCTGAGGGTGCCCAGGGCTCCTGCACTGTCTGTGTaGCTAGACTCCTTCCTCTTGCGCCGCCAAGAGGATACCAGTGGG +
Preference number: 6 (lower is better)
Translates to: NTQNLRVPRAPALSV*LDSFLLRRQEDTSG
Trigger: CCCACTGGTATCCTCTTGGCGGCGCAAGAGGAAGGAGTCTAGCAACACAGACAGTGCAGGAGCCCTGGGCACCCTCAGGTTCTGTGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS GCA 72 bp ATGCCGCCCTCTGTTGCCAGAATTCTCTGCACGGTTTaGAGGACGCTGGTTGCCATAGTGACATCGCCGCAG +
Preference number: 6 (lower is better)
Translates to: MPPSVARILCTV*RTLVAIVTSPQ
Trigger: CTGCGGCGATGTCACTATGGCAACCAGCGTCCTGCAAACCGTGCAGAGAATTCTGGCAACAGAGGGCGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS CAA 72 bp GCTCCTGCACTGTCTGTGTTGCTAGACTCCTTCCTCTaGCGCCGCCAAGAGGATACCAGTGGGTCTGAGCAG +
Preference number: 6 (lower is better)
Translates to: APALSVLLDSFL*RRQEDTSGSEQ
Trigger: CTGCTCAGACCCACTGGTATCCTCTTGGCGGCGCAAGAGGAAGGAGTCTAGCAACACAGACAGTGCAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CAA 72 bp CATGCCGCCCTCTGTTGCCAGAATTCTCTGCACGGTTaGCAGGACGCTGGTTGCCATAGTGACATCGCCGCA +
Preference number: 6 (lower is better)
Translates to: HAALCCQNSLHG*QDAGCHSDIAA
Trigger: TGCGGCGATGTCACTATGGCAACCAGCGTCCTGCAAACCGTGCAGAGAATTCTGGCAACAGAGGGCGGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS GCA 72 bp GGCTACTTCCTTAAAGGTCTTCTTCCTGGTGATGCCTaGCCCCTTTGCTGCACTTCCCTTCCAGGGGTCTGG +
Preference number: 6 (lower is better)
Translates to: GYFLKGLLPGDA*PLCCTSLPGVW
Trigger: CCAGACCCCTGGAAGGGAAGTGCAGCAAAGGGGGCAGGCATCACCAGGAAGAAGACCTTTAAGGAAGTAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CCA 72 bp ACATCAAAGCGGCCATTTCCTGGGGTCCAGCCATGTTaGATACAGAGCTCAGTGATCTCCACGTTGGCGGGG +
Preference number: 6 (lower is better)
Translates to: TSKRPFPGVQPC*IQSSVISTLAG
Trigger: CCCCGCCAACGTGGAGATCACTGAGCTCTGTATCCAACATGGCTGGACCCCAGGAAATGGCCGCTTTGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CCA 72 bp GGCAGAGTGAAGAGTTCTGGGGGCTCATCAGGAGCCTaGAGTAACAGGGGCAGCACATCAAAGCGGCCATTT +
Preference number: 6 (lower is better)
Translates to: GRVKSSGGSSGA*SNRGSTSKRPF
Trigger: AAATGGCCGCTTTGATGTGCTGCCCCTGTTACTCCAGGCTCCTGATGAGCCCCCAGAACTCTTCACTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CCA 72 bp GAAAAGCTCTGGGTGCGTATGCGGCTTGTCACCTCCTaGGTGCGCAATGTGAGTCCGAAAATGTCCTCGTGG +
Preference number: 6 (lower is better)
Translates to: EKLWVRMRLVTS*VRNVSPKMSSW
Trigger: CCACGAGGACATTTTCGGACTCACATTGCGCACCCAGGAGGTGACAAGCCGCATACGCACCCAGAGCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS CAA 72 bp CACATCAAAGCGGCCATTTCCTGGGGTCCAGCCATGTaGGATACAGAGCTCAGTGATCTCCACGTTGGCGGG +
Preference number: 6 (lower is better)
Translates to: HIKAAISWGPAM*DTELSDLHVGG
Trigger: CCCGCCAACGTGGAGATCACTGAGCTCTGTATCCAACATGGCTGGACCCCAGGAAATGGCCGCTTTGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CAA 72 bp TGCCATAGTGACATCGCCGCAGACAAACATATGTCCTaGCTCAAGGCACAGCACACGGTGAACCTCCGCGGC +
Preference number: 6 (lower is better)
Translates to: CHSDIAADKHMS*LKAQHTVNLRG
Trigger: GCCGCGGAGGTTCACCGTGTGCTGTGCCTTGAGCAAGGACATATGTTTGTCTGCGGCGATGTCACTATGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS CAA 90 bp ATCCAGCTCCATGCCGCCCTCTGTTGCCAGAATTCTCTGCACGGTTaGCAGGACGCTGGTTGCCATAGTGACATCGCCGCAGACAAACAT +
Preference number: 6 (lower is better)
Translates to: IQLHAALCCQNSLHG*QDAGCHSDIAADKH
Trigger: ATGTTTGTCTGCGGCGATGTCACTATGGCAACCAGCGTCCTGCAAACCGTGCAGAGAATTCTGGCAACAGAGGGCGGCATGGAGCTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS TCA 72 bp AGGATTGTAGCCTGGAACATCTTCCGCCTGTGCACGTaGGTCAGCCCTGGTAGTAATTGCAGGCTCTCAGCC +
Preference number: 6 (lower is better)
Translates to: RIVAWNIFRLCT*VSPGSNCRLSA
Trigger: GGCTGAGAGCCTGCAATTACTACCAGGGCTGACTCACGTGCACAGGCGGAAGATGTTCCAGGCTACAATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS TCA 72 bp ACAAACATATGTCCTTGCTCAAGGCACAGCACACGGTaGACCTCCGCGGCTAGCTCTGTCCTCAGGAGGTCT +
Preference number: 6 (lower is better)
Translates to: TNICPCSRHSTR*TSAASSVLRRS
Trigger: AGACCTCCTGAGGACAGAGCTAGCCGCGGAGGTTCACCGTGTGCTGTGCCTTGAGCAAGGACATATGTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS TCA 72 bp TGCGTATGCGGCTTGTCACCTCCTGGGTGCGCAATGTaGGTCCGAAAATGTCCTCGTGGTAGCGTTGCTGAT +
Preference number: 6 (lower is better)
Translates to: CVCGLSPPGCAM*VRKCPRGSVAD
Trigger: ATCAGCAACGCTACCACGAGGACATTTTCGGACTCACATTGCGCACCCAGGAGGTGACAAGCCGCATACGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS TCA 72 bp TGCCTTCACACGCTTCGCCATCACCGTGCCCATGAGTaGGGCAGAGATCTTCACTGCATTGGCTACTTCCTT +
Preference number: 6 (lower is better)
Translates to: CLHTLRHHRAHE*GRDLHCIGYFL
Trigger: AAGGAAGTAGCCAATGCAGTGAAGATCTCTGCCTCACTCATGGGCACGGTGATGGCGAAGCGTGTGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS TCA 72 bp TGGTTGCCTTCACACGCTTCGCCATCACCGTGCCCATaGGTGAGGCAGAGATCTTCACTGCATTGGCTACTT +
Preference number: 6 (lower is better)
Translates to: WLPSHASPSPCP*VRQRSSLHWLL
Trigger: AAGTAGCCAATGCAGTGAAGATCTCTGCCTCACTCATGGGCACGGTGATGGCGAAGCGTGTGAAGGCAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CAA 72 bp TTTCCACCGCTGCCTTGTCTTTCCACAGGGATGAGGTaGTCCTGGTGTCCAGATCCATGCACACAGCCACAT +
Preference number: 6 (lower is better)
Translates to: FPPLPCLSTGMR*SWCPDPCTQPH
Trigger: ATGTGGCTGTGTGCATGGATCTGGACACCAGGACAACCTCATCCCTGTGGAAAGACAAGGCAGCGGTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS TCA 72 bp CCGGCCAGGGCAGCGCTGGGGGAACACTGTGATGGCTaGACGAAGATTGCCTCTATTTGTTGCGTATTTAAT +
Preference number: 6 (lower is better)
Translates to: PARAALGEHCDG*TKIASICCVFN
Trigger: ATTAAATACGCAACAAATAGAGGCAATCTTCGTTCAGCCATCACAGTGTTCCCCCAGCGCTGCCCTGGCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS GCA 72 bp TGTAGCCCTTTGATCTCAATGTCGTGTAGTCTGTCTTaGCAGAATCCCCGGAAGGGTGCAATGCCAGTCCCT +
Preference number: 6 (lower is better)
Translates to: CSPLISMSCSLS*QNPRKGAMPVP
Trigger: AGGGACTGGCATTGCACCCTTCCGGGGATTCTGGCAAGACAGACTACACGACATTGAGATCAAAGGGCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS GCA 72 bp TGCCAGAATTCTCTGCACGGTTTGCAGGACGCTGGTTaGCATAGTGACATCGCCGCAGACAAACATATGTCC +
Preference number: 6 (lower is better)
Translates to: CQNSLHGLQDAG*HSDIAADKHMS
Trigger: GGACATATGTTTGTCTGCGGCGATGTCACTATGGCAACCAGCGTCCTGCAAACCGTGCAGAGAATTCTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030834.7
CDS TCA 72 bp ATTAATTTCCACCGCTGCCTTGTCTTTCCACAGGGATaGGGTTGTCCTGGTGTCCAGATCCATGCACACAGC +
Preference number: 6 (lower is better)
Translates to: INFHRCLVFPQG*GCPGVQIHAHS
Trigger: GCTGTGTGCATGGATCTGGACACCAGGACAACCTCATCCCTGTGGAAAGACAAGGCAGCGGTGGAAATTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS TCA 72 bp AAGAGGATACCAGTGGGTCTGAGCAGGAGACACTGTTaGATCGGATTTTGTAGCTCTTGTGCTGCTCAGGCC +
Preference number: 6 (lower is better)
Translates to: KRIPVGLSRRHC*IGFCSSCAAQA
Trigger: GGCCTGAGCAGCACAAGAGCTACAAAATCCGATTCAACAGTGTCTCCTGCTCAGACCCACTGGTATCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS TCA 72 bp CAAACACCAAAGTCATGGGGGCAGGTTGTAGCCCTTTaGTCTCAATGTCGTGTAGTCTGTCTTGCCAGAATC +
Preference number: 6 (lower is better)
Translates to: QTPKSWGQVVAL*SQCRVVCLARI
Trigger: GATTCTGGCAAGACAGACTACACGACATTGAGATCAAAGGGCTACAACCTGCCCCCATGACTTTGGTGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6
CDS CAA 72 bp CCAAACACCAAAGTCATGGGGGCAGGTTGTAGCCCTTaGATCTCAATGTCGTGTAGTCTGTCTTGCCAGAAT +
Preference number: 6 (lower is better)
Translates to: PNTKVMGAGCSP*ISMSCSLSCQN
Trigger: ATTCTGGCAAGACAGACTACACGACATTGAGATCAAAGGGCTACAACCTGCCCCCATGACTTTGGTGTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030834.7
ENSMUST00000115090.6