Pregenerated sensors for NOS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020826Ensembl transcript IDs: ENSMUST00000018610.7, ENSMUST00000214397.3
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | GCATGGTGCCTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTaGAGTTTTTCTCTGCTCTCAGCTCCAAGGAAGAGTGAGAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: AWCLLVVTQSASVRR*SFSLLSAPRKSERQ Trigger: TTGCCTCTCACTCTTCCTTGGAGCTGAGAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| 3UTR GCA 72 bp | AGCGGCGGCATGGTGCCTCCTGGTGGTCACCCAAAGTaGTTCAGTCAGGAGGTTGAGTTTTTCTCTGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: SGGMVPPGGHPK*FSQEVEFFSAL Trigger: GAGAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCATGCCGCCGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| 3UTR GCA 72 bp | TACATAGTGCAGCTAAGTATTAGAGCGGCGGCATGGTaGCTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: YIVQLSIRAAAW*LLVVTQSASVR Trigger: CCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCATGCCGCCGCTCTAATACTTAGCTGCACTATGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| 3UTR CCA 72 bp | CTGTACATAGTGCAGCTAAGTATTAGAGCGGCGGCATaGTGCCTCCTGGTGGTCACCCAAAGTGCTTCAGTC | + |
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Preference number: 3 (lower is better) Translates to: LYIVQLSIRAAA*CLLVVTQSASV Trigger: GACTGAAGCACTTTGGGTGACCACCAGGAGGCACCATGCCGCCGCTCTAATACTTAGCTGCACTATGTACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| 3UTR TCA 72 bp | GTTGAGTTTTTCTCTGCTCTCAGCTCCAAGGAAGAGTaGGAGGCAAAGGAGGAGAAGGAGAAGGAGGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: VEFFSALSSKEE*EAKEEKEKEGA Trigger: AGCTCCCTCCTTCTCCTTCTCCTCCTTTGCCTCTCACTCTTCCTTGGAGCTGAGAGCAGAGAAAAACTCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR TCA 90 bp | GGCGGCATGGTGCCTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGCATCCTCCTGCCCACTaGGTTCGTCCCCTTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: GGMVPPGGHPKCFSQEVEHPPAH*VRPLLL Trigger: CAGGAGAAGGGGACGAACTCAGTGGGCAGGAGGATG...CTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCATGCCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR GCA 90 bp | GGCGGCATGGTGCCTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGACTGGATCCTGCCGATaGAGCGAGGGGCATTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: GGMVPPGGHPKCFSQEVETGSCR*SEGHSS Trigger: GGAGGAATGCCCCTCGCTGCATCGGCAGGATCCAGT...CTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCATGCCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR GCA 90 bp | GGCGGCATGGTGCCTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGCGAGCGTCAAAGACCTaGAGGTTGGACCACTGGATC | + |
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Preference number: 4 (lower is better) Translates to: GGMVPPGGHPKCFSQEVERASKT*RLDHWI Trigger: GATCCAGTGGTCCAACCTGCAGGTCTTTGACGCTCG...CTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCATGCCGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR GCA 90 bp | CCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAGAAGCTGGAACTCTGGGCTCCAGGGCGGTCTGGTTaGCTGGGAAGATCCCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: PKPLTIIFTQCQKLELWAPGRSG*LGRSPG Trigger: ACCTGGGGATCTTCCCAGGCAACCAGACCGCCCTGG...AGCCCAGAGTTCCAGCTTCTGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR CCA 90 bp | GGCGGCATGGTGCCTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTCATTCTGCCAGATGTaGGTCTTCCAGGGCTCGATC | + |
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Preference number: 4 (lower is better) Translates to: GGMVPPGGHPKCFSQEVESFCQM*VFQGSI Trigger: GATCGAGCCCTGGAAGACCCACATCTGGCAGAATGA...CTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCATGCCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR CCA 90 bp | CCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTCTGCTCTCAGCTCCAAGGAACCCCAGGCAGGTAGCTaGGCCCTCGGCTGCCCTCGA | + |
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Preference number: 4 (lower is better) Translates to: PKCFSQEVEFFSALSSKEPQAGS*ALGCPR Trigger: TCGAGGGCAGCCGAGGGCCCAGCTACCTGCCTGGGG...TTCCTTGGAGCTGAGAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR TCA 90 bp | GGCGGCATGGTGCCTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGCTGTGTGGTGGTCCATaGTGGTCACATTCTGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GGMVPPGGHPKCFSQEVELCGGP*WSHSAS Trigger: AGAAGCAGAATGTGACCATCATGGACCACCACACAG...CTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCATGCCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR GCA 90 bp | GATTGCATTTCGCTGTCTCCCCAAGCCCCTCACCATTATCTTTACTCAGTGCCACAGCCAAATCCAGTCTaGCGGGCAGCCTCCACGGGC | + |
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Preference number: 4 (lower is better) Translates to: DCISLSPQAPHHYLYSVPQPNPV*RAASTG Trigger: GCCCGTGGAGGCTGCCCGGCAGACTGGATTTGGCTG...TGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGAAATGCAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR GCA 90 bp | GGCGGCATGGTGCCTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGAGAACTGAGGGTACATaGTGGAGCCAAGGCCAAACA | + |
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Preference number: 4 (lower is better) Translates to: GGMVPPGGHPKCFSQEVERTEGT*WSQGQT Trigger: TGTTTGGCCTTGGCTCCAGCATGTACCCTCAGTTCT...CTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCATGCCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR GCA 90 bp | TGGTGCCTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTTGGTCCTCCTCCGGGTaGCGGCACCCAAACACCAAG | + |
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Preference number: 4 (lower is better) Translates to: WCLLVVTQSASVRRLSFSWSSSG*RHPNTK Trigger: CTTGGTGTTTGGGTGCCGGCACCCGGAGGAGGACCA...AGAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR CCA 90 bp | GGATTGCATTTCGCTGTCTCCCCAAGCCCCTCACCATTATCTTTACTCAGTGCCTGGCCCTGCTCCCCGTaGAGCACGCTGAGTACCTCA | + |
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Preference number: 4 (lower is better) Translates to: GLHFAVSPSPSPLSLLSAWPCSP*STLSTS Trigger: TGAGGTACTCAGCGTGCTCCACGGGGAGCAGGGCCA...GGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGAAATGCAATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR TCA 90 bp | GATTGCATTTCGCTGTCTCCCCAAGCCCCTCACCATTATCTTTACTCAGTGCCATCTGTGCTGTCCCAGTaGGGAGCTGCGGGGAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: DCISLSPQAPHHYLYSVPSVLSQ*GAAGSH Trigger: ATGGCTCCCCGCAGCTCCTCACTGGGACAGCACAGA...TGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGAAATGCAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR TCA 90 bp | CCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTCTGCTCTCAGCTCCAAGGAACCCTCGAAGGTGAGCTaGACGAGGAGGGTGGTGCGG | + |
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Preference number: 4 (lower is better) Translates to: PKCFSQEVEFFSALSSKEPSKVS*TRRVVR Trigger: CCGCACCACCCTCCTCGTTCAGCTCACCTTCGAGGG...TTCCTTGGAGCTGAGAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR GCA 90 bp | TTTCGCTGTCTCCCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAGAAGCTGTGGACCACTGGATCCTaGCGATGCAGCGAGGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: FRCLPKPLTIIFTQCQKLWTTGS*RCSEGH Trigger: ATGCCCCTCGCTGCATCGGCAGGATCCAGTGGTCCA...CAGCTTCTGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR GCA 90 bp | TTTCGCTGTCTCCCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAGAAGCTGGGCCACGGCAGGCAGTaGATACCACTTCAACCCGAG | + |
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Preference number: 4 (lower is better) Translates to: FRCLPKPLTIIFTQCQKLGHGRQ*IPLQPE Trigger: CTCGGGTTGAAGTGGTATGCACTGCCTGCCGTGGCC...CAGCTTCTGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR GCA 90 bp | ATGGTGCCTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCCGCTCCAAGATTCCCTaGACCAGGGCGGTCTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: MVPPGGHPKCFSQEVEFFRSKIP*TRAVWL Trigger: CAACCAGACCGCCCTGGTGCAGGGAATCTTGGAGCG...GAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR CCA 90 bp | TTTCGCTGTCTCCCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAGAAGCTGTTGCCGTCACTCCGCTaGGGGAACACAGTGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: FRCLPKPLTIIFTQCQKLLPSLR*GNTVMA Trigger: GGCCATCACTGTGTTCCCCCAGCGGAGTGACGGCAA...CAGCTTCTGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR CCA 90 bp | CCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAGAAGCTGGAACTCTGGGCTATTGAAGGGGCAGGCTaGGAATTCGAGGCCACCCAC | + |
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Preference number: 4 (lower is better) Translates to: PKPLTIIFTQCQKLELWAIEGAG*EFEATH Trigger: GTGGGTGGCCTCGAATTCCCAGCCTGCCCCTTCAAT...AGCCCAGAGTTCCAGCTTCTGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR CCA 90 bp | GGATTGCATTTCGCTGTCTCCCCAAGCCCCTCACCATTATCTTTACTCAGTGCCCAGGGCACTGGGTCCTaGGGCTTCAGGTTCCTGATC | + |
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Preference number: 4 (lower is better) Translates to: GLHFAVSPSPSPLSLLSAQGTGS*GFRFLI Trigger: GATCAGGAACCTGAAGCCCCAGGACCCAGTGCCCTG...GGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGAAATGCAATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR CCA 90 bp | ATGGTGCCTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCGGGTCCTCAGGGAGCTaGAAGCCACTGACACTTCGC | + |
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Preference number: 4 (lower is better) Translates to: MVPPGGHPKCFSQEVEFFGSSGS*KPLTLR Trigger: GCGAAGTGTCAGTGGCTTCCAGCTCCCTGAGGACCC...GAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR TCA 90 bp | ATGGTGCCTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCGCAAAGGCGCAGAACTaGGGGTACATGCTGGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: MVPPGGHPKCFSQEVEFFAKAQN*GYMLEP Trigger: TGGCTCCAGCATGTACCCTCAGTTCTGCGCCTTTGC...GAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR TCA 90 bp | TGGTGCCTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTTCATGCGGCCTCCTTTaGGCCCTTTGTGCTGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: WCLLVVTQSASVRRLSFSSCGLL*ALCAGS Trigger: ACTCCCAGCACAAAGGGCTCAAAGGAGGCCGCATGA...AGAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR GCA 90 bp | GGATTGCATTTCGCTGTCTCCCCAAGCCCCTCACCATTATCTTTACTCAGTGCCTTTGTACAGCCCAGCTaGGGAAGGCATCCTCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: GLHFAVSPSPSPLSLLSAFVQPS*GRHPPA Trigger: GGCAGGAGGATGCCTTCCGCAGCTGGGCTGTACAAA...GGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGAAATGCAATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR GCA 90 bp | CCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAGAAGCTGGAACTCTGGGCTTTCAAGATAGGGAGCTaGGACAGCAGGAAGGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: PKPLTIIFTQCQKLELWAFKIGS*DSRKAA Trigger: CGCTGCCTTCCTGCTGTCGCAGCTCCCTATCTTGAA...AGCCCAGAGTTCCAGCTTCTGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR CCA 90 bp | TTTCGCTGTCTCCCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAGAAGCTGTGCAGGTTGGACCACTaGATCCTGCCGATGCAGCGA | + |
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Preference number: 4 (lower is better) Translates to: FRCLPKPLTIIFTQCQKLCRLDH*ILPMQR Trigger: TCGCTGCATCGGCAGGATCCAGTGGTCCAACCTGCA...CAGCTTCTGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR TCA 90 bp | CCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTCTGCTCTCAGCTCCAAGGAATGGCAGCATCCCCTCTaGTGGTGCCATCGGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: PKCFSQEVEFFSALSSKEWQHPL*WCHRAS Trigger: AGATGCCCGATGGCACCATCAGAGGGGATGCTGCCA...TTCCTTGGAGCTGAGAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR TCA 90 bp | GATTGCATTTCGCTGTCTCCCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAGGGGCTTCAGGTTCCTaGTCCAAGTGCTGCAGACAC | + |
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Preference number: 4 (lower is better) Translates to: DCISLSPQAPHHYLYSVPGASGS*SKCCRH Trigger: GTGTCTGCAGCACTTGGATCAGGAACCTGAAGCCCC...TGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGAAATGCAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR GCA 90 bp | ATGGTGCCTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCGAACGAGGAGGGTGGTaGGGCTGGACTTTTCACTCT | + |
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Preference number: 4 (lower is better) Translates to: MVPPGGHPKCFSQEVEFFERGGW*GWTFHS Trigger: AGAGTGAAAAGTCCAGCCGCACCACCCTCCTCGTTC...GAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR CCA 90 bp | ATGGTGCCTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCGATGCTCCCAGACACTaGAGGGACCAGCCAAATCCA | + |
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Preference number: 4 (lower is better) Translates to: MVPPGGHPKCFSQEVEFFDAPRH*RDQPNP Trigger: TGGATTTGGCTGGTCCCTCCAGTGTCTGGGAGCATC...GAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR TCA 90 bp | GAGGAGAGAGATTTAGTAGTCCACAATAGTACAATACTACTTGGTAGGGTGGAGCCTGTTGGGGCAAGCTaGGAGGCTCCCAGGTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: EERDLVVHNSTILLGRVEPVGAS*EAPRWD Trigger: GTCCCACCTGGGAGCCTCTCAGCTTGCCCCAACAGG...CTCCACCCTACCAAGTAGTATTGTACTATTGTGGACTACTAAATCTCTCTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR TCA 90 bp | CTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTCTGCTCTTGTACTCTGAGGGCTaGCACAAGGCCTCCAATCTC | + |
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Preference number: 4 (lower is better) Translates to: LLVVTQSASVRRLSFSLLLYSEG*HKASNL Trigger: GAGATTGGAGGCCTTGTGTCAGCCCTCAGAGTACAA...GAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR TCA 90 bp | GAGGAGAGAGATTTAGTAGTCCACAATAGTACAATACTACTTGGTAGGGTGGAGACGGCCACAGTGAGGTaGACCTCCGAGGGGGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: EERDLVVHNSTILLGRVETATVR*TSEGVW Trigger: CCACACCCCCTCGGAGGTTCACCTCACTGTGGCCGT...CTCCACCCTACCAAGTAGTATTGTACTATTGTGGACTACTAAATCTCTCTCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR GCA 90 bp | GGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTCTGCTCTCAGCCACTCGTACTTGGGATaGTCCATGGTCACCTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: GGHPKCFSQEVEFFSALSHSYLG*SMVTSN Trigger: GTTGGAGGTGACCATGGAGCATCCCAAGTACGAGTG...GCTGAGAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR CCA 90 bp | ATGGTGCCTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCAGGTCGATGCACAACTaGGTGAACTCCAAGGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: MVPPGGHPKCFSQEVEFFRSMHN*VNSKVA Trigger: TGCCACCTTGGAGTTCACCCAGTTGTGCATCGACCT...GAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR CCA 90 bp | TTTCGCTGTCTCCCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAGAAGCTGGACTCTGAGGCTGTGTaGTGGTCCATGATGGTCACA | + |
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Preference number: 4 (lower is better) Translates to: FRCLPKPLTIIFTQCQKLDSEAV*WSMMVT Trigger: TGTGACCATCATGGACCACCACACAGCCTCAGAGTC...CAGCTTCTGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR CCA 90 bp | CCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAGAAGCTGGAACTCTGGGCTAACACGTTCTTTGCATaGATGCTGCTGAGGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: PKPLTIIFTQCQKLELWANTFFA*MLLRAL Trigger: CAGAGCCCTCAGCAGCATCCATGCAAAGAACGTGTT...AGCCCAGAGTTCCAGCTTCTGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR CCA 90 bp | TTTCGCTGTCTCCCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAGAAGCTGCGCTCAAGTTCAGCTTaGTGGCCACCAGCTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: FRCLPKPLTIIFTQCQKLRSSSA*WPPASS Trigger: TGAAGAAGCTGGTGGCCACCAAGCTGAACTTGAGCG...CAGCTTCTGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR TCA 90 bp | CTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTCTGCTCCACTGCCCCAGTTTTTaGTCCTCACATACTGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: LLVVTQSASVRRLSFSLLHCPSF*SSHTVD Trigger: GTCCACAGTATGTGAGGATCAAAAACTGGGGCAGTG...GAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR GCA 90 bp | CCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAGAAGCTGGAACTCTGGGCTACATTTCCTGTGCTGTaGTACAGTTCCGAGCGTCAA | + |
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Preference number: 4 (lower is better) Translates to: PKPLTIIFTQCQKLELWATFPVL*YSSERQ Trigger: TTGACGCTCGGAACTGTAGCACAGCACAGGAAATGT...AGCCCAGAGTTCCAGCTTCTGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR GCA 90 bp | GGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTCTGCTCTCAGCCTCAGCTTCTCATTCTaGCAGATGTGGGTCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GGHPKCFSQEVEFFSALSLSFSF*QMWVFQ Trigger: CTGGAAGACCCACATCTGGCAGAATGAGAAGCTGAG...GCTGAGAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR GCA 90 bp | TGGTGCCTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTACCACCAGCAGTAGTTaGTCCTCTTCCAAGGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: WCLLVVTQSASVRRLSFSTTSSS*SSSKVL Trigger: AAGCACCTTGGAAGAGGAGCAACTACTGCTGGTGGT...AGAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR GCA 90 bp | CCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAGAAGCTGGAACTCTGGGCTGATTTCTTCAGAGTCTaGCCATTGCTGGGACAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKPLTIIFTQCQKLELWADFFRV*PLLGQS Trigger: AGACTGTCCCAGCAATGGGCAGACTCTGAAGAAATC...AGCCCAGAGTTCCAGCTTCTGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR GCA 90 bp | GATTGCATTTCGCTGTCTCCCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAAAGGCAGCGGGCACATaGAAGGAAGGGAACTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DCISLSPQAPHHYLYSVPKAAGT*KEGNSS Trigger: TGAAGAGTTCCCTTCCTTGCATGTGCCCGCTGCCTT...TGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGAAATGCAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR CCA 90 bp | ATGGTGCCTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCCTTGTCCAGGGATTCTaGAACATTCTGTGCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: MVPPGGHPKCFSQEVEFFLVQGF*NILCCP Trigger: GGGACAGCACAGAATGTTCCAGAATCCCTGGACAAG...GAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR CCA 90 bp | GGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTCTGCTCTCAGCTCTGAGGCTGTGTGGTaGTCCATGATGGTCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: GGHPKCFSQEVEFFSALSSEAVW*SMMVTF Trigger: GAATGTGACCATCATGGACCACCACACAGCCTCAGA...GCTGAGAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR TCA 90 bp | GGATTGCATTTCGCTGTCTCCCCAAGCCCCTCACCATTATCTTTACTCAGTGCCACTTGGACTTGCAAGTaGAATCCGATGTGGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLHFAVSPSPSPLSLLSATWTCK*NPMWPC Trigger: ACAAGGCCACATCGGATTTCACTTGCAAGTCCAAGT...GGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGAAATGCAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR TCA 90 bp | GATTGCATTTCGCTGTCTCCCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAAACTCTTGGGGTTCATaGTGGACCCCAAGCAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: DCISLSPQAPHHYLYSVPNSWGS*WTPSKT Trigger: AGTCTTGCTTGGGGTCCATCATGAACCCCAAGAGTT...TGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGAAATGCAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR TCA 90 bp | CCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTCTGCTCTCAGCTCCAAGGAAGTACCGGATGAGCTGTaGATTCCAGAGCCTGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PKCFSQEVEFFSALSSKEVPDEL*IPEPEV Trigger: GACTTCAGGCTCTGGAATTCACAGCTCATCCGGTAC...TTCCTTGGAGCTGAGAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR GCA 90 bp | GGCGGCATGGTGCCTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGATGTTCCTCTATTTTTaGCTCTTTAAAGGAGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: GGMVPPGGHPKCFSQEVEMFLYF*LFKGAI Trigger: TATGGCTCCTTTAAAGAGGCAAAAATAGAGGAACAT...CTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCATGCCGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR GCA 90 bp | GGCGGCATGGTGCCTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGCATAAAGTATGTGTCTaGAGATGTGCTGAAACATTT | + |
|
Preference number: 4 (lower is better) Translates to: GGMVPPGGHPKCFSQEVEHKVCV*RCAETF Trigger: AAATGTTTCAGCACATCTGCAGACACATACTTTATG...CTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCATGCCGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR GCA 90 bp | CTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTCTGCTCCTGTGGCTCCCATGTTaGATTGGAAGTGAAGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLVVTQSASVRRLSFSLLLWLPC*IGSEAF Trigger: AAACGCTTCACTTCCAATGCAACATGGGAGCCACAG...GAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR GCA 90 bp | GATTGCATTTCGCTGTCTCCCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAGGTAAACACGTTCTTTaGATGGATGCTGCTGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DCISLSPQAPHHYLYSVPGKHVL*MDAAEG Trigger: GCCCTCAGCAGCATCCATGCAAAGAACGTGTTTACC...TGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGAAATGCAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR GCA 90 bp | GATTGCATTTCGCTGTCTCCCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAGGAACAGCACTCTCTTaGGGACCATCTCCTGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: DCISLSPQAPHHYLYSVPGTALS*GPSPAF Trigger: AAATGCAGGAGATGGTCCGCAAGAGAGTGCTGTTCC...TGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGAAATGCAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR CCA 90 bp | GAGGAGAGAGATTTAGTAGTCCACAATAGTACAATACTACTTGGTAGGGTGGAGAGGGAGGCCAGTGTGTaGGTCTCCAGGCCCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EERDLVVHNSTILLGRVEREASV*VSRPIL Trigger: AAGGATGGGCCTGGAGACCCACACACTGGCCTCCCT...CTCCACCCTACCAAGTAGTATTGTACTATTGTGGACTACTAAATCTCTCTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR CCA 90 bp | CCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAGAAGCTGGAACTCTGGGCTTGCTTCTGGAAACTATaGAGCACAGCCACATTGATC | + |
|
Preference number: 4 (lower is better) Translates to: PKPLTIIFTQCQKLELWACFWKL*STATLI Trigger: GATCAATGTGGCTGTGCTCCATAGTTTCCAGAAGCA...AGCCCAGAGTTCCAGCTTCTGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR CCA 90 bp | CTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTCTGCTCGTCACATTCTGCTTCTaGAAACTATGGAGCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLVVTQSASVRRLSFSLLVTFCF*KLWSTA Trigger: GGCTGTGCTCCATAGTTTCCAGAAGCAGAATGTGAC...GAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR TCA 90 bp | CCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTCTGCTCTCAGCTCCAAGGAAAAGACCTCTGGATCTTaGCCATCAGCTTGCAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: PKCFSQEVEFFSALSSKEKTSGS*PSACKT Trigger: GGTCTTGCAAGCTGATGGTCAAGATCCAGAGGTCTT...TTCCTTGGAGCTGAGAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR TCA 90 bp | CCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTCTGCTCTCAGCTCCAAGGAATCTGCATGTGCTTCATaGAGGACTCTGAGGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PKCFSQEVEFFSALSSKESACAS*RTLRLC Trigger: ACACAGCCTCAGAGTCCTTCATGAAGCACATGCAGA...TTCCTTGGAGCTGAGAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR GCA 90 bp | CTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTCTGCTCCTGGACTTTTCACTCTaGAGATTCTGCTGGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLVVTQSASVRRLSFSLLLDFSL*RFCWDF Trigger: GAAATCCCAGCAGAATCTGCAGAGTGAAAAGTCCAG...GAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR CCA 90 bp | GATTGCATTTCGCTGTCTCCCCAAGCCCCTCACCATTATCTTTACTCAGTGCCACTCTGCAGATTCTGCTaGGATTTCAGCCTCATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: DCISLSPQAPHHYLYSVPLCRFC*DFSLMV Trigger: TACCATGAGGCTGAAATCCCAGCAGAATCTGCAGAG...TGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGAAATGCAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR GCA 90 bp | CCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTCTGCTCTCAGCTCCAAGGAACTGAAACATTTCCTGTaGTGTGCTACAGTTCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PKCFSQEVEFFSALSSKELKHFL*CATVPS Trigger: GCTCGGAACTGTAGCACAGCACAGGAAATGTTTCAG...TTCCTTGGAGCTGAGAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR GCA 90 bp | TTTCGCTGTCTCCCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAGAAGCTGCCCATAGGAAAAGACTaGACCGAAGATATCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: FRCLPKPLTIIFTQCQKLPIGKD*TEDIFM Trigger: CATGAAGATATCTTCGGTGCAGTCTTTTCCTATGGG...CAGCTTCTGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR CCA 90 bp | GGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTCTGCTCTCAGCGATTTCAAAGACCTCTaGATCTTGACCATCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GGHPKCFSQEVEFFSALSDFKDL*ILTISL Trigger: CAAGCTGATGGTCAAGATCCAGAGGTCTTTGAAATC...GCTGAGAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR CCA 90 bp | CCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTCTGCTCTCAGCTCCAAGGAAACTTGGGATGCTCCATaGTCACCTCCAACACAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PKCFSQEVEFFSALSSKETWDAP*SPPTQD Trigger: ATCTTGTGTTGGAGGTGACCATGGAGCATCCCAAGT...TTCCTTGGAGCTGAGAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR CCA 90 bp | GAGGAGAGAGATTTAGTAGTCCACAATAGTACAATACTACTTGGTAGGGTGGAGGGAGGGTGGTGCGGCTaGACTTTTCACTCTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: EERDLVVHNSTILLGRVEGGWCG*TFHSAD Trigger: ATCTGCAGAGTGAAAAGTCCAGCCGCACCACCCTCC...CTCCACCCTACCAAGTAGTATTGTACTATTGTGGACTACTAAATCTCTCTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR CCA 90 bp | CCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTCTGCTCTCAGCTCCAAGGAAGCACACAGTTTGGTGTaGTGTAGGACAATCCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: PKCFSQEVEFFSALSSKEAHSLV*CRTIHN Trigger: GTTGTGGATTGTCCTACACCACACCAAACTGTGTGC...TTCCTTGGAGCTGAGAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR TCA 90 bp | GAGGAGAGAGATTTAGTAGTCCACAATAGTACAATACTACTTGGTAGGGTGGAGCCATGTACCAACCATTaGAGGGGCAGGCTGGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: EERDLVVHNSTILLGRVEPCTNH*RGRLGI Trigger: AATTCCCAGCCTGCCCCTTCAATGGTTGGTACATGG...CTCCACCCTACCAAGTAGTATTGTACTATTGTGGACTACTAAATCTCTCTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR TCA 90 bp | GAGGAGAGAGATTTAGTAGTCCACAATAGTACAATACTACTTGGTAGGGTGGAGCTTCATGAAGGACTCTaGGGCTGTGTGGTGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EERDLVVHNSTILLGRVELHEGL*GCVVVH Trigger: ATGGACCACCACACAGCCTCAGAGTCCTTCATGAAG...CTCCACCCTACCAAGTAGTATTGTACTATTGTGGACTACTAAATCTCTCTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR GCA 90 bp | GAGGAGAGAGATTTAGTAGTCCACAATAGTACAATACTACTTGGTAGGGTGGAGGCTCCTCTTCCAAGGTaGTTGCCTTATACTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EERDLVVHNSTILLGRVEAPLPR*LPYTGP Trigger: TGGACCAGTATAAGGCAAGCACCTTGGAAGAGGAGC...CTCCACCCTACCAAGTAGTATTGTACTATTGTGGACTACTAAATCTCTCTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR CCA 90 bp | GAGGAGAGAGATTTAGTAGTCCACAATAGTACAATACTACTTGGTAGGGTGGAGTGTCTCTGGGTCCTCTaGTCAAACTCTTGGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EERDLVVHNSTILLGRVECLWVL*SNSWGS Trigger: TGAACCCCAAGAGTTTGACCAGAGGACCCAGAGACA...CTCCACCCTACCAAGTAGTATTGTACTATTGTGGACTACTAAATCTCTCTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR TCA 90 bp | GAGGAGAGAGATTTAGTAGTCCACAATAGTACAATACTACTTGGTAGGGTGGAGGATGTGGCCTTGTGGTaGAGAGTGTCATGCAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: EERDLVVHNSTILLGRVEDVALW*RVSCKI Trigger: GATTTTGCATGACACTCTTCACCACAAGGCCACATC...CTCCACCCTACCAAGTAGTATTGTACTATTGTGGACTACTAAATCTCTCTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR GCA 90 bp | GAGGAGAGAGATTTAGTAGTCCACAATAGTACAATACTACTTGGTAGGGTGGAGTCACTCTGCAGATTCTaGTGGGATTTCAGCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: EERDLVVHNSTILLGRVESLCRF*WDFSLM Trigger: CATGAGGCTGAAATCCCAGCAGAATCTGCAGAGTGA...CTCCACCCTACCAAGTAGTATTGTACTATTGTGGACTACTAAATCTCTCTCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR CCA 90 bp | GAGGAGAGAGATTTAGTAGTCCACAATAGTACAATACTACTTGGTAGGGTGGAGTGTTGCCATTGTTGGTaGCATAAAGTATGTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EERDLVVHNSTILLGRVECCHCW*HKVCVC Trigger: GCAGACACATACTTTATGCCACCAACAATGGCAACA...CTCCACCCTACCAAGTAGTATTGTACTATTGTGGACTACTAAATCTCTCTCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS TCA 90 bp | GGTGTTCCCCAGGCAGGTAGCTGGGCCCTCGGCTGCCCTCGAAGGTaGGCTGAACGAGGAGGGTGGTGCGGCTGGACTTTTCACTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GVPQAGSWALGCPRR*AERGGWCGWTFHSA Trigger: TGCAGAGTGAAAAGTCCAGCCGCACCACCCTCCTCGTTCAGCTCACCTTCGAGGGCAGCCGAGGGCCCAGCTACCTGCCTGGGGAACACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018610.7 ENSMUST00000214397.3 |
||
| CDS CCA 90 bp | TTGATCTCCGTGACAGCCCGGTCTTTCCAGAGGGAGGCCAGTGTGTaGGTCTCCAGGCCCATCCTTCGGCCCACTTCCTCCAGGATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LISVTARSFQREASV*VSRPILRPTSSRML Trigger: CAACATCCTGGAGGAAGTGGGCCGAAGGATGGGCCTGGAGACCCACACACTGGCCTCCCTCTGGAAAGACCGGGCTGTCACGGAGATCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018610.7 ENSMUST00000214397.3 |
||
| CDS-3UTR CAA 90 bp | CCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAGAAGCTGGAACTCTGGGCTCGTCCCCTTCTCCTGTaGGGGCAAGCTGAGAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PKPLTIIFTQCQKLELWARPLLL*GQAERL Trigger: GAGCCTCTCAGCTTGCCCCAACAGGAGAAGGGGACG...AGCCCAGAGTTCCAGCTTCTGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR CAA 90 bp | ATGGTGCCTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCACCAGGGCGGTCTGGTaGCCTGGGAAGATCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: MVPPGGHPKCFSQEVEFFTRAVW*PGKIPR Trigger: CCTGGGGATCTTCCCAGGCAACCAGACCGCCCTGGT...GAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR CAA 90 bp | TGGTGCCTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTGGCTGCCCGGAAGGTTaGTACAGCCCAGCTGCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: WCLLVVTQSASVRRLSFSGCPEG*YSPAAE Trigger: TTCCGCAGCTGGGCTGTACAAACCTTCCGGGCAGCC...AGAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR CAA 90 bp | GGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTCTGCTCTCAGCTCCAGAGGGGTAGGCTaGTCTCTGGGTCCTCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GGHPKCFSQEVEFFSALSSRGVG*SLGPLV Trigger: GACCAGAGGACCCAGAGACAAGCCTACCCCTCTGGA...GCTGAGAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR CAA 90 bp | ATGGTGCCTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCAGCCTGAAGTCATGTTaGCCGTCACTCCGCTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: MVPPGGHPKCFSQEVEFFSLKSC*PSLRWG Trigger: CCCCCAGCGGAGTGACGGCAAACATGACTTCAGGCT...GAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR CAA 90 bp | CTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTCTGCTCACCTCCAGTAGCATGTaGGCCACGGCAGGCAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLVVTQSASVRRLSFSLLTSSSM*ATAGSA Trigger: TGCACTGCCTGCCGTGGCCAACATGCTACTGGAGGT...GAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR CAA 90 bp | ATGGTGCCTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCCTCATGCGGCCTCCTTaGAGCCCTTTGTGCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: MVPPGGHPKCFSQEVEFFLMRPP*SPLCWE Trigger: CTCCCAGCACAAAGGGCTCAAAGGAGGCCGCATGAG...GAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS GCA 90 bp | GGTCGATGTCACATGCAGCTTGTCCAGGGATTCTGGAACATTCTGTaGTGTCCCAGTGAGGAGCTGCGGGGAGCCATTTTGGTGACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GRCHMQLVQGFWNIL*CPSEELRGAILVTL Trigger: AAGAGTCACCAAAATGGCTCCCCGCAGCTCCTCACTGGGACAGCACAGAATGTTCCAGAATCCCTGGACAAGCTGCATGTGACATCGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018610.7 ENSMUST00000214397.3 |
||
| CDS-3UTR CAA 90 bp | GGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTCTGCTCTCAGCCCTCCTTTGAGCCCTTaGTGCTGGGAGTCATGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGHPKCFSQEVEFFSALSPPLSP*CWESWS Trigger: GCTCCATGACTCCCAGCACAAAGGGCTCAAAGGAGG...GCTGAGAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR CAA 90 bp | CTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTCTGCTCCTGCGGGGAGCCATTTaGGTGACTCTTAGGGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: LLVVTQSASVRRLSFSLLLRGAI*VTLRVI Trigger: GATGACCCTAAGAGTCACCAAAATGGCTCCCCGCAG...GAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS-3UTR CAA 90 bp | CTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTCTGCTCCCTCTGGTCAAACTCTaGGGGTTCATGATGGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLVVTQSASVRRLSFSLLPLVKL*GFMMDP Trigger: GGGGTCCATCATGAACCCCAAGAGTTTGACCAGAGG...GAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
||
| CDS CCA 90 bp | ACTTCAACCCGAGCTCCTGGAACCACTCGTACTTGGGATGCTCCATaGTCACCTCCAACACAAGATCAGGAGGGATTTCAAAGACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TSTRAPGTTRTWDAP*SPPTQDQEGFQRPL Trigger: CAGAGGTCTTTGAAATCCCTCCTGATCTTGTGTTGGAGGTGACCATGGAGCATCCCAAGTACGAGTGGTTCCAGGAGCTCGGGTTGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018610.7 ENSMUST00000214397.3 |
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| CDS CCA 90 bp | ACGAGGAGGGTGGTGCGGCTGGACTTTTCACTCTGCAGATTCTGCTaGGATTTCAGCCTCATGGTAAACACGTTCTTTGCATGGATGCTG | + |
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Preference number: 5 (lower is better) Translates to: TRRVVRLDFSLCRFC*DFSLMVNTFFAWML Trigger: CAGCATCCATGCAAAGAACGTGTTTACCATGAGGCTGAAATCCCAGCAGAATCTGCAGAGTGAAAAGTCCAGCCGCACCACCCTCCTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018610.7 ENSMUST00000214397.3 |
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| CDS-3UTR CAA 90 bp | ATGGTGCCTCCTGGTGGTCACCCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTTCCTCCAGGCCATCTaGGTGGCAAAGATGAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: MVPPGGHPKCFSQEVEFFFLQAI*VAKMSS Trigger: TGAGCTCATCTTTGCCACCAAGATGGCCTGGAGGAA...GAAAAACTCAACCTCCTGACTGAAGCACTTTGGGTGACCACCAGGAGGCACCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR CAA 90 bp | TTTCGCTGTCTCCCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAGAAGCTGATCTTGACCATCAGCTaGCAAGACCAGAGGCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: FRCLPKPLTIIFTQCQKLILTIS*QDQRQH Trigger: GTGCTGCCTCTGGTCTTGCAAGCTGATGGTCAAGAT...CAGCTTCTGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR CAA 90 bp | GGATTGCATTTCGCTGTCTCCCCAAGCCCCTCACCATTATCTTTACTCAGTGCCCTGGATGAGCCTATATaGCTGTGGCTCCCATGTTGC | + |
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Preference number: 5 (lower is better) Translates to: GLHFAVSPSPSPLSLLSALDEPI*LWLPCC Trigger: GCAACATGGGAGCCACAGCAATATAGGCTCATCCAG...GGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGAAATGCAATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR CAA 90 bp | TTTCGCTGTCTCCCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAGAAGCTGTGGAACAGCACTCTCTaGCGGACCATCTCCTGCATT | + |
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Preference number: 5 (lower is better) Translates to: FRCLPKPLTIIFTQCQKLWNSTL*RTISCI Trigger: AATGCAGGAGATGGTCCGCAAGAGAGTGCTGTTCCA...CAGCTTCTGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS TCA 90 bp | ACCTCCAACACAAGATCAGGAGGGATTTCAAAGACCTCTGGATCTTaGCCATCAGCTTGCAAGACCAGAGGCAGCACATCAAAGCGGCCA | + |
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Preference number: 5 (lower is better) Translates to: TSNTRSGGISKTSGS*PSACKTRGSTSKRP Trigger: TGGCCGCTTTGATGTGCTGCCTCTGGTCTTGCAAGCTGATGGTCAAGATCCAGAGGTCTTTGAAATCCCTCCTGATCTTGTGTTGGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018610.7 ENSMUST00000214397.3 |
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| CDS-3UTR CAA 90 bp | TTTCGCTGTCTCCCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAGAAGCTGGATGTCACATGCAGCTaGTCCAGGGATTCTGGAACA | + |
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Preference number: 5 (lower is better) Translates to: FRCLPKPLTIIFTQCQKLDVTCS*SRDSGT Trigger: TGTTCCAGAATCCCTGGACAAGCTGCATGTGACATC...CAGCTTCTGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR CAA 90 bp | TTTCGCTGTCTCCCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAGAAGCTGCCACTGCCCCAGTTTTaGATCCTCACATACTGTGGA | + |
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Preference number: 5 (lower is better) Translates to: FRCLPKPLTIIFTQCQKLPLPQF*ILTYCG Trigger: TCCACAGTATGTGAGGATCAAAAACTGGGGCAGTGG...CAGCTTCTGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR CAA 90 bp | CCAAAGTGCTTCAGTCAGGAGGTTGAGTTTTTCTCTGCTCTCAGCTCCAAGGAAGACCCCAAGCAAGACTaGGACTTGCAAGTGAAATCC | + |
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Preference number: 5 (lower is better) Translates to: PKCFSQEVEFFSALSSKEDPKQD*DLQVKS Trigger: GGATTTCACTTGCAAGTCCAAGTCTTGCTTGGGGTC...TTCCTTGGAGCTGAGAGCAGAGAAAAACTCAACCTCCTGACTGAAGCACTTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR CAA 90 bp | CCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAGAAGCTGGAACTCTGGGCTCTCTTTCAGGTCACTTaGGTAGGATTTGACTTTGAA | + |
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Preference number: 5 (lower is better) Translates to: PKPLTIIFTQCQKLELWALFQVT*VGFDFE Trigger: TTCAAAGTCAAATCCTACCAAAGTGACCTGAAAGAG...AGCCCAGAGTTCCAGCTTCTGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR CAA 90 bp | TTTCGCTGTCTCCCCAAGCCCCTCACCATTATCTTTACTCAGTGCCAGAAGCTGTTGTTTCTATTTCCTTaGTTACAGCTTCCAGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: FRCLPKPLTIIFTQCQKLLFLFP*LQLPAW Trigger: CCAGGCTGGAAGCTGTAACAAAGGAAATAGAAACAA...CAGCTTCTGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR CAA 90 bp | GAGGAGAGAGATTTAGTAGTCCACAATAGTACAATACTACTTGGTAGGGTGGAGCTCCAGGCACACAGTTaGGTGTGGTGTAGGACAATC | + |
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Preference number: 5 (lower is better) Translates to: EERDLVVHNSTILLGRVELQAHS*VWCRTI Trigger: GATTGTCCTACACCACACCAAACTGTGTGCCTGGAG...CTCCACCCTACCAAGTAGTATTGTACTATTGTGGACTACTAAATCTCTCTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR CAA 90 bp | GAGGAGAGAGATTTAGTAGTCCACAATAGTACAATACTACTTGGTAGGGTGGAGGCTGGTAGGTTCCTGTaGTTTCTATTTCCTTTGTTA | + |
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Preference number: 5 (lower is better) Translates to: EERDLVVHNSTILLGRVEAGRFL*FLFPLL Trigger: TAACAAAGGAAATAGAAACAACAGGAACCTACCAGC...CTCCACCCTACCAAGTAGTATTGTACTATTGTGGACTACTAAATCTCTCTCCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS-3UTR CAA 90 bp | GAGGAGAGAGATTTAGTAGTCCACAATAGTACAATACTACTTGGTAGGGTGGAGGTTTTCTTCACGTTGTaGTTAATGTCCTTTTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: EERDLVVHNSTILLGRVEVFFTL*LMSFSS Trigger: AGAGGAAAAGGACATTAACAACAACGTGAAGAAAAC...CTCCACCCTACCAAGTAGTATTGTACTATTGTGGACTACTAAATCTCTCTCCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS CAA 72 bp | ACTCGCTCCAAGATTCCCTGCACCAGGGCGGTCTGGTaGCCTGGGAAGATCCCCAGGTGTTCCCCAGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: TRSKIPCTRAVW*PGKIPRCSPGR Trigger: CCTGCCTGGGGAACACCTGGGGATCTTCCCAGGCAACCAGACCGCCCTGGTGCAGGGAATCTTGGAGCGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018610.7 ENSMUST00000214397.3 |
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| CDS CCA 72 bp | CAGTTCCGAGCGTCAAAGACCTGCAGGTTGGACCACTaGATCCTGCCGATGCAGCGAGGGGCATTCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: QFRASKTCRLDH*ILPMQRGAFLQ Trigger: CTGGAGGAATGCCCCTCGCTGCATCGGCAGGATCCAGTGGTCCAACCTGCAGGTCTTTGACGCTCGGAACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018610.7 ENSMUST00000214397.3 |
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| CDS GCA 72 bp | GCTTTTGCAGGATGTCCTGAACGTAGACCTTGGGTTTaGCGGGCAGCCGGGAGTAGCCTGTGTGCACCTGGA | + |
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Preference number: 6 (lower is better) Translates to: AFAGCPERRPWV*RAAGSSLCAPG Trigger: TCCAGGTGCACACAGGCTACTCCCGGCTGCCCGGCAAACCCAAGGTCTACGTTCAGGACATCCTGCAAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018610.7 ENSMUST00000214397.3 |
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| CDS CCA 72 bp | ACGGCAGGCAGTGCATACCACTTCAACCCGAGCTCCTaGAACCACTCGTACTTGGGATGCTCCATGGTCACC | + |
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Preference number: 6 (lower is better) Translates to: TAGSAYHFNPSS*NHSYLGCSMVT Trigger: GGTGACCATGGAGCATCCCAAGTACGAGTGGTTCCAGGAGCTCGGGTTGAAGTGGTATGCACTGCCTGCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018610.7 ENSMUST00000214397.3 |
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| CDS CAA 90 bp | TGGAACATTCTGTGCTGTCCCAGTGAGGAGCTGCGGGGAGCCATTTaGGTGACTCTTAGGGTCATCTTGTATTGTTGGGCTGGCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: WNILCCPSEELRGAI*VTLRVILYCWAGWA Trigger: GGCCCAGCCAGCCCAACAATACAAGATGACCCTAAGAGTCACCAAAATGGCTCCCCGCAGCTCCTCACTGGGACAGCACAGAATGTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214397.3 |
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| CDS TCA 72 bp | GCTGTCCCAGTGAGGAGCTGCGGGGAGCCATTTTGGTaGCTCTTAGGGTCATCTTGTATTGTTGGGCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: AVPVRSCGEPFW*LLGSSCIVGLA Trigger: AGCCAGCCCAACAATACAAGATGACCCTAAGAGTCACCAAAATGGCTCCCCGCAGCTCCTCACTGGGACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214397.3 |
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| CDS GCA 72 bp | CACATGCAGCTTGTCCAGGGATTCTGGAACATTCTGTaGTGTCCCAGTGAGGAGCTGCGGGGAGCCATTTTG | + |
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Preference number: 6 (lower is better) Translates to: HMQLVQGFWNIL*CPSEELRGAIL Trigger: CAAAATGGCTCCCCGCAGCTCCTCACTGGGACAGCACAGAATGTTCCAGAATCCCTGGACAAGCTGCATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018610.7 ENSMUST00000214397.3 |
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| CDS CAA 90 bp | GGCAGTGCATACCACTTCAACCCGAGCTCCTGGAACCACTCGTACTaGGGATGCTCCATGGTCACCTCCAACACAAGATCAGGAGGGATT | + |
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Preference number: 6 (lower is better) Translates to: GSAYHFNPSSWNHSY*GCSMVTSNTRSGGI Trigger: AATCCCTCCTGATCTTGTGTTGGAGGTGACCATGGAGCATCCCAAGTACGAGTGGTTCCAGGAGCTCGGGTTGAAGTGGTATGCACTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018610.7 ENSMUST00000214397.3 |
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| CDS TCA 72 bp | GCTGTCCCAGTGAGGAGCTGCGGGGAGCCATTTTGGTaGCTCTTAGGGTCATCTTGTATTGTTGGGCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: AVPVRSCGEPFW*LLGSSCIVGLR Trigger: TCTCAGCCCAACAATACAAGATGACCCTAAGAGTCACCAAAATGGCTCCCCGCAGCTCCTCACTGGGACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS CCA 72 bp | CTCTCCACTGCCCCAGTTTTTGATCCTCACATACTGTaGACGGGTCGATGTCACATGCAGCTTGTCCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: LSTAPVFDPHIL*TGRCHMQLVQG Trigger: TCCCTGGACAAGCTGCATGTGACATCGACCCGTCCACAGTATGTGAGGATCAAAAACTGGGGCAGTGGAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018610.7 ENSMUST00000214397.3 |
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| CDS CAA 72 bp | CTGTGCTGTCCCAGTGAGGAGCTGCGGGGAGCCATTTaGGTGACTCTTAGGGTCATCTTGTATTGTTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LCCPSEELRGAI*VTLRVILYCWA Trigger: AGCCCAACAATACAAGATGACCCTAAGAGTCACCAAAATGGCTCCCCGCAGCTCCTCACTGGGACAGCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018610.7 ENSMUST00000214397.3 |
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| CDS CAA 90 bp | ATGATGGTCACATTCTGCTTCTGGAAACTATGGAGCACAGCCACATaGATCTCCGTGACAGCCCGGTCTTTCCAGAGGGAGGCCAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: MMVTFCFWKLWSTAT*ISVTARSFQREASV Trigger: CACACTGGCCTCCCTCTGGAAAGACCGGGCTGTCACGGAGATCAATGTGGCTGTGCTCCATAGTTTCCAGAAGCAGAATGTGACCATCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018610.7 ENSMUST00000214397.3 |
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| CDS CAA 90 bp | TGGAACATTCTGTGCTGTCCCAGTGAGGAGCTGCGGGGAGCCATTTaGGTGACTCTTAGGGTCATCTTGTATTGTTGGGCTGAGAACAGC | + |
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Preference number: 6 (lower is better) Translates to: WNILCCPSEELRGAI*VTLRVILYCWAENS Trigger: GCTGTTCTCAGCCCAACAATACAAGATGACCCTAAGAGTCACCAAAATGGCTCCCCGCAGCTCCTCACTGGGACAGCACAGAATGTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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| CDS CAA 90 bp | AAGATCAGGAGGGATTTCAAAGACCTCTGGATCTTGACCATCAGCTaGCAAGACCAGAGGCAGCACATCAAAGCGGCCATAGCGGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: KIRRDFKDLWILTIS*QDQRQHIKAAIAGL Trigger: AAGCCCCGCTATGGCCGCTTTGATGTGCTGCCTCTGGTCTTGCAAGCTGATGGTCAAGATCCAGAGGTCTTTGAAATCCCTCCTGATCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018610.7 ENSMUST00000214397.3 |
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| CDS CAA 72 bp | TCACCACCAGCAGTAGTTGCTCCTCTTCCAAGGTGCTaGCCTTATACTGGTCCATGCAGACAACCTTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: SPPAVVAPLPRC*PYTGPCRQPWC Trigger: ACACCAAGGTTGTCTGCATGGACCAGTATAAGGCAAGCACCTTGGAAGAGGAGCAACTACTGCTGGTGGTGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018610.7 ENSMUST00000214397.3 |
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| CDS GCA 72 bp | TTGATCCTCACATACTGTGGACGGGTCGATGTCACATaGAGCTTGTCCAGGGATTCTGGAACATTCTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: LILTYCGRVDVT*SLSRDSGTFCA Trigger: AGCACAGAATGTTCCAGAATCCCTGGACAAGCTGCATGTGACATCGACCCGTCCACAGTATGTGAGGATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018610.7 ENSMUST00000214397.3 |
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| CDS CCA 72 bp | GTGGTGCGGCTGGACTTTTCACTCTGCAGATTCTGCTaGGATTTCAGCCTCATGGTAAACACGTTCTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: VVRLDFSLCRFC*DFSLMVNTFFA Trigger: TGCAAAGAACGTGTTTACCATGAGGCTGAAATCCCAGCAGAATCTGCAGAGTGAAAAGTCCAGCCGCACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018610.7 ENSMUST00000214397.3 |
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| CDS CAA 72 bp | AAACTCTTGGGGTTCATGATGGACCCCAAGCAAGACTaGGACTTGCAAGTGAAATCCGATGTGGCCTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: KLLGFMMDPKQD*DLQVKSDVALW Trigger: CCACAAGGCCACATCGGATTTCACTTGCAAGTCCAAGTCTTGCTTGGGGTCCATCATGAACCCCAAGAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018610.7 ENSMUST00000214397.3 |
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| CDS TCA 72 bp | ACAAGATCAGGAGGGATTTCAAAGACCTCTGGATCTTaGCCATCAGCTTGCAAGACCAGAGGCAGCACATCA | + |
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Preference number: 6 (lower is better) Translates to: TRSGGISKTSGS*PSACKTRGSTS Trigger: TGATGTGCTGCCTCTGGTCTTGCAAGCTGATGGTCAAGATCCAGAGGTCTTTGAAATCCCTCCTGATCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018610.7 ENSMUST00000214397.3 |
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| CDS CAA 72 bp | CTAAGCATGAACAGAGATTTCTTCAGAGTCTGCCCATaGCTGGGACAGTCTCCATTCCCAAATGTGCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: LSMNRDFFRVCP*LGQSPFPNVLV Trigger: GACAAGCACATTTGGGAATGGAGACTGTCCCAGCAATGGGCAGACTCTGAAGAAATCTCTGTTCATGCTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018610.7 ENSMUST00000214397.3 |
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| CDS CAA 90 bp | TTTCTTCACGTTGTTGTTAATGTCCTTTTCCTCTTTCAGGTCACTTaGGTAGGATTTGACTTTGAAGAGAAACTTCCAGGGGCAAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: FLHVVVNVLFLFQVT*VGFDFEEKLPGASH Trigger: ATGGCTTGCCCCTGGAAGTTTCTCTTCAAAGTCAAATCCTACCAAAGTGACCTGAAAGAGGAAAAGGACATTAACAACAACGTGAAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018610.7 |
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