Pregenerated sensors for NOP9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019297Ensembl transcript IDs: ENSMUST00000019441.9
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCTCCGTTGGACTTCCTCGCTGCTGCAAGGCCTGGGCCATATGCTaGTGGGCATCTCCTCCACCCTTCGCCATGTGGTGGAGGGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: SSVGLPRCCKAWAIC*WASPPPFAMWWRGL Trigger: CAGCCCCCTCCACCACATGGCGAAGGGTGGAGGAGATGCCCAGCAGCATATGGCCCAGGCCTTGCAGCAGCGAGGAAGTCCAACGGAGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR GCA 90 bp | AGCTCCTCCGTTGGACTTCCTCGCTGCTGCAAGGCCTGGGCCATATaGTGCTGGGCATCTCCTCCACCCTTCGCCATGTGGTGGAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: SSSVGLPRCCKAWAI*CWASPPPFAMWWRG Trigger: CCCCCTCCACCACATGGCGAAGGGTGGAGGAGATGCCCAGCAGCATATGGCCCAGGCCTTGCAGCAGCGAGGAAGTCCAACGGAGGAGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR CCA 90 bp | TGGGCCATATGCTGCTGGGCATCTCCTCCACCCTTCGCCATGTGGTaGAGGGGGCTGATCGATGGCAGTGGCACGGGCAGAGACACCTCC | + |
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Preference number: 1 (lower is better) Translates to: WAICCWASPPPFAMW*RGLIDGSGTGRDTS Trigger: GGAGGTGTCTCTGCCCGTGCCACTGCCATCGATCAGCCCCCTCCACCACATGGCGAAGGGTGGAGGAGATGCCCAGCAGCATATGGCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR CCA 90 bp | TCCGTTGGACTTCCTCGCTGCTGCAAGGCCTGGGCCATATGCTGCTaGGCATCTCCTCCACCCTTCGCCATGTGGTGGAGGGGGCTGATC | + |
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Preference number: 1 (lower is better) Translates to: SVGLPRCCKAWAICC*ASPPPFAMWWRGLI Trigger: GATCAGCCCCCTCCACCACATGGCGAAGGGTGGAGGAGATGCCCAGCAGCATATGGCCCAGGCCTTGCAGCAGCGAGGAAGTCCAACGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR CCA 90 bp | CTGCTTAGGTCTCCACTCCTTTCTGGTCCTCCCTGGCTTCTTCCCTaGCCTACCACTGACCTGTGGGGGCACAGGCTCTGGGGAGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: LLRSPLLSGPPWLLP*PTTDLWGHRLWGAV Trigger: CACAGCTCCCCAGAGCCTGTGCCCCCACAGGTCAGTGGTAGGCCAGGGAAGAAGCCAGGGAGGACCAGAAAGGAGTGGAGACCTAAGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR TCA 90 bp | TCCACTCCTTTCTGGTCCTCCCTGGCTTCTTCCCTGGCCTACCACTaGCCTGTGGGGGCACAGGCTCTGGGGAGCTGTGAAGGACATCAA | + |
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Preference number: 1 (lower is better) Translates to: STPFWSSLASSLAYH*PVGAQALGSCEGHQ Trigger: TTGATGTCCTTCACAGCTCCCCAGAGCCTGTGCCCCCACAGGTCAGTGGTAGGCCAGGGAAGAAGCCAGGGAGGACCAGAAAGGAGTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR TCA 90 bp | AACCAGCGTGAGGCTGACGGGGCCTCCCTTCCTGCCTCTTGTCACTaGCAGGTCCTGGAGACCTTGCTGCTACGTGGAGTGCTAACACTG | + |
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Preference number: 1 (lower is better) Translates to: NQREADGASLPASCH*QVLETLLLRGVLTL Trigger: CAGTGTTAGCACTCCACGTAGCAGCAAGGTCTCCAGGACCTGTCAGTGACAAGAGGCAGGAAGGGAGGCCCCGTCAGCCTCACGCTGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR CCA 90 bp | TCCTGCCTCTTGTCACTGACAGGTCCTGGAGACCTTGCTGCTACGTaGAGTGCTAACACTGGTCCTGGAGGAGGATGGGACTGCTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: SCLLSLTGPGDLAAT*SANTGPGGGWDCCG Trigger: TCCACAGCAGTCCCATCCTCCTCCAGGACCAGTGTTAGCACTCCACGTAGCAGCAAGGTCTCCAGGACCTGTCAGTGACAAGAGGCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR CCA 90 bp | CAAGCTGACTCCATCCTAACAGATCTGCACACTGCCTTGTTCCTCTaGCCTGTACATCTTCCTGAAGAATGCTACCTGTCTTCCCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: QADSILTDLHTALFL*PVHLPEECYLSSLH Trigger: GTGGAGGGAAGACAGGTAGCATTCTTCAGGAAGATGTACAGGCCAGAGGAACAAGGCAGTGTGCAGATCTGTTAGGATGGAGTCAGCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR GCA 90 bp | GGAGTTGGCCCTAAAAGAGTACTCAGGTCAGAGACCAATCTGTCATaGAACCCTCGGATCCATGTATCCCATAAACTCCCCCTTATCAGC | + |
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Preference number: 1 (lower is better) Translates to: GVGPKRVLRSETNLS*NPRIHVSHKLPLIS Trigger: GCTGATAAGGGGGAGTTTATGGGATACATGGATCCGAGGGTTGCATGACAGATTGGTCTCTGACCTGAGTACTCTTTTAGGGCCAACTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR CCA 90 bp | CCTCCACTCCTAATGAGATCATGCTTTGAGCCTGTGCTGAAAGACTaGTTCCATGTGACACAGGAGGGTAGTAAAGGCACCATCAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: PPLLMRSCFEPVLKD*FHVTQEGSKGTIRL Trigger: AAGCCTGATGGTGCCTTTACTACCCTCCTGTGTCACATGGAACCAGTCTTTCAGCACAGGCTCAAAGCATGATCTCATTAGGAGTGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR CCA 90 bp | CCGCATCACCTTCGATGTGTACAAGCAAAATCCCCGAGACCTCTTTaGCAGCCTCAACGTGAAAGCTACATTCTATGGACTCTACTCCAT | + |
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Preference number: 1 (lower is better) Translates to: PHHLRCVQAKSPRPL*QPQRESYILWTLLH Trigger: ATGGAGTAGAGTCCATAGAATGTAGCTTTCACGTTGAGGCTGCCAAAGAGGTCTCGGGGATTTTGCTTGTACACATCGAAGGTGATGCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR-3UTR GCA 90 bp | TGCCCTCCAGGGAGCTCCTCCGTTGGACTTCCTCGCTGCTGCAAGGCCTGGGCCAACAGATCTGCACACTaGCTTGTTCCTCTGGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: CPPGSSSVGLPRCCKAWANRSAH*LVPLAC Trigger: ACAGGCCAGAGGAACAAGGCAGTGTGCAGATCTGTT...GGCCCAGGCCTTGCAGCAGCGAGGAAGTCCAACGGAGGAGCTCCCTGGAGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR CAA 90 bp | GTGGACAGTGAGGACTTCTTCCAGCTGCTGGAGGACGACACGTGCTaGATGGTGCTTGAGCAGGGCCAGAGCTGGAGCCCCAAGGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: VDSEDFFQLLEDDTC*MVLEQGQSWSPKVR Trigger: TCTCACCTTGGGGCTCCAGCTCTGGCCCTGCTCAAGCACCATCAAGCACGTGTCGTCCTCCAGCAGCTGGAAGAAGTCCTCACTGTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR-3UTR GCA 90 bp | AGCCCCACAGTGGGGCTGCTTAGGTCTCCACTCCTTTCTGGTCCTCCCTGGCTTGTTGGACTTCCTCGCTaGTGCAAGGCCTGGGCCATA | + |
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Preference number: 2 (lower is better) Translates to: SPTVGLLRSPLLSGPPWLVGLPR*CKAWAI Trigger: TATGGCCCAGGCCTTGCAGCAGCGAGGAAGTCCAAC...AAGCCAGGGAGGACCAGAAAGGAGTGGAGACCTAAGCAGCCCCACTGTGGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR-3UTR CCA 90 bp | GATATGCCAACCAGCGTGAGGCTGACGGGGCCTCCCTTCCTGCCTCTTGTCACTAGGGAGCTCCTCCGTTaGACTTCCTCGCTGCTGCAA | + |
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Preference number: 2 (lower is better) Translates to: DMPTSVRLTGPPFLPLVTRELLR*TSSLLQ Trigger: TTGCAGCAGCGAGGAAGTCCAACGGAGGAGCTCCCT...AGTGACAAGAGGCAGGAAGGGAGGCCCCGTCAGCCTCACGCTGGTTGGCATATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR-3UTR GCA 90 bp | AACCCCGACCTCCTTGCAGCTTCCTTTAACTCTCTGATCTCCACTCTGCCCTCCGCCTGGGCCATATGCTaGTGGGCATCTCCTCCACCC | + |
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Preference number: 2 (lower is better) Translates to: NPDLLAASFNSLISTLPSAWAIC*WASPPP Trigger: GGGTGGAGGAGATGCCCAGCAGCATATGGCCCAGGC...GGAGGGCAGAGTGGAGATCAGAGAGTTAAAGGAAGCTGCAAGGAGGTCGGGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR-3UTR CCA 90 bp | GATATGCCAACCAGCGTGAGGCTGACGGGGCCTCCCTTCCTGCCTCTTGTCACTGTCTCCACTCCTTTCTaGTCCTCCCTGGCTTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: DMPTSVRLTGPPFLPLVTVSTPF*SSLASS Trigger: GGAAGAAGCCAGGGAGGACCAGAAAGGAGTGGAGAC...AGTGACAAGAGGCAGGAAGGGAGGCCCCGTCAGCCTCACGCTGGTTGGCATATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR-3UTR CCA 90 bp | GATGTTGTCATACGGCCTAGGACGGGAGAAGCCAAAACACAGCAAGGACATCGCCCCTTCGCCATGTGGTaGAGGGGGCTGATCGATGGC | + |
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Preference number: 2 (lower is better) Translates to: DVVIRPRTGEAKTQQGHRPFAMW*RGLIDG Trigger: GCCATCGATCAGCCCCCTCCACCACATGGCGAAGGG...GCGATGTCCTTGCTGTGTTTTGGCTTCTCCCGTCCTAGGCCGTATGACAACATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR-3UTR CCA 90 bp | GGACGGGAGAAGCCAAAACACAGCAAGGACATCGCCCGCATCACCTTCGATGTGTGGGCCATATGCTGCTaGGCATCTCCTCCACCCTTC | + |
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Preference number: 2 (lower is better) Translates to: GREKPKHSKDIARITFDVWAICC*ASPPPF Trigger: GAAGGGTGGAGGAGATGCCCAGCAGCATATGGCCCA...CACATCGAAGGTGATGCGGGCGATGTCCTTGCTGTGTTTTGGCTTCTCCCGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR-3UTR CCA 90 bp | ATCGCCCGCATCACCTTCGATGTGTACAAGCAAAATCCCCGAGACCTCTTTGGCCCACCCTTCGCCATGTaGTGGAGGGGGCTGATCGAT | + |
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Preference number: 2 (lower is better) Translates to: IARITFDVYKQNPRDLFGPPFAM*WRGLID Trigger: ATCGATCAGCCCCCTCCACCACATGGCGAAGGGTGG...GCCAAAGAGGTCTCGGGGATTTTGCTTGTACACATCGAAGGTGATGCGGGCGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR-3UTR CCA 90 bp | CAGAGACCAATCTGTCATGCAACCCTCGGATCCATGTATCCCATAAACTCCCCCCGCTGCTGCAAGGCCTaGGCCATATGCTGCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: QRPICHATLGSMYPINSPRCCKA*AICCWA Trigger: TGCCCAGCAGCATATGGCCCAGGCCTTGCAGCAGCG...GGGGGAGTTTATGGGATACATGGATCCGAGGGTTGCATGACAGATTGGTCTCTG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR-3UTR TCA 90 bp | AGCCCCACAGTGGGGCTGCTTAGGTCTCCACTCCTTTCTGGTCCTCCCTGGCTTGCCTGTACATCTTCCTaGAGAATGCTACCTGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: SPTVGLLRSPLLSGPPWLACTSS*RMLPVF Trigger: GAAGACAGGTAGCATTCTTCAGGAAGATGTACAGGC...AAGCCAGGGAGGACCAGAAAGGAGTGGAGACCTAAGCAGCCCCACTGTGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR-3UTR GCA 90 bp | AACCCCGACCTCCTTGCAGCTTCCTTTAACTCTCTGATCTCCACTCTGCCCTCCTCTTCCCTCCACTCCTaGCTTCCACATACCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: NPDLLAASFNSLISTLPSSSLHS*LPHTLQ Trigger: CTGCAGGGTATGTGGAAGGCAGGAGTGGAGGGAAGA...GGAGGGCAGAGTGGAGATCAGAGAGTTAAAGGAAGCTGCAAGGAGGTCGGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR-3UTR TCA 90 bp | CAGAGACCAATCTGTCATGCAACCCTCGGATCCATGTATCCCATAAACTCCCCCTTGTCCCCTGCATCCTaGTCCCACCGTAATCGCTGC | + |
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Preference number: 2 (lower is better) Translates to: QRPICHATLGSMYPINSPLSPAS*SHRNRC Trigger: GCAGCGATTACGGTGGGATCAGGATGCAGGGGACAA...GGGGGAGTTTATGGGATACATGGATCCGAGGGTTGCATGACAGATTGGTCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR CAA 90 bp | GGGCAGGTCCACTTCAATGATGAGAATGTCCCACAGAGTGGGATGTaGTCATACGGCCTAGGACGGGAGAAGCCAAAACACAGCAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: GQVHFNDENVPQSGM*SYGLGREKPKHSKD Trigger: GTCCTTGCTGTGTTTTGGCTTCTCCCGTCCTAGGCCGTATGACAACATCCCACTCTGTGGGACATTCTCATCATTGAAGTGGACCTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR-3UTR GCA 90 bp | TGTGTACAAGCAAAATCCCCGAGACCTCTTTGGCAGCCTCAACGTGAAAGCTACAAGGCCTGGGCCATATaGTGCTGGGCATCTCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: CVQAKSPRPLWQPQRESYKAWAI*CWASPP Trigger: TGGAGGAGATGCCCAGCAGCATATGGCCCAGGCCTT...GTAGCTTTCACGTTGAGGCTGCCAAAGAGGTCTCGGGGATTTTGCTTGTACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR-3UTR TCA 90 bp | GGACGGGAGAAGCCAAAACACAGCAAGGACATCGCCCGCATCACCTTCGATGTGAATGAGATCATGCTTTaGGCCTGTGCTGAAAGACTG | + |
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Preference number: 2 (lower is better) Translates to: GREKPKHSKDIARITFDVNEIML*ACAERL Trigger: CAGTCTTTCAGCACAGGCTCAAAGCATGATCTCATT...CACATCGAAGGTGATGCGGGCGATGTCCTTGCTGTGTTTTGGCTTCTCCCGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR-3UTR GCA 90 bp | AAAGAGTACTCAGGTCAGAGACCAATCTGTCATGCAACCCTCGGATCCATGTATGGACTTCCTCGCTGCTaGAAGGCCTGGGCCATATGC | + |
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Preference number: 2 (lower is better) Translates to: KEYSGQRPICHATLGSMYGLPRC*KAWAIC Trigger: GCATATGGCCCAGGCCTTGCAGCAGCGAGGAAGTCC...ATACATGGATCCGAGGGTTGCATGACAGATTGGTCTCTGACCTGAGTACTCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR-3UTR GCA 90 bp | GGACGGGAGAAGCCAAAACACAGCAAGGACATCGCCCGCATCACCTTCGATGTGCTCCTAATGAGATCATaGTTTGAGCCTGTGCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: GREKPKHSKDIARITFDVLLMRS*FEPVLK Trigger: TTTCAGCACAGGCTCAAAGCATGATCTCATTAGGAG...CACATCGAAGGTGATGCGGGCGATGTCCTTGCTGTGTTTTGGCTTCTCCCGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR-3UTR CCA 90 bp | CCGAGACCTCTTTGGCAGCCTCAACGTGAAAGCTACATTCTATGGACTCTACTCCCTGTGCTGAAAGACTaGTTCCATGTGACACAGGAG | + |
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Preference number: 2 (lower is better) Translates to: PRPLWQPQRESYILWTLLPVLKD*FHVTQE Trigger: CTCCTGTGTCACATGGAACCAGTCTTTCAGCACAGG...GAGTAGAGTCCATAGAATGTAGCTTTCACGTTGAGGCTGCCAAAGAGGTCTCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGTCCACTTCAATGATGAGAATGTCCCACAGAGTGGGATGTTGTCATACGGCACTGCCTTGTTCCTCTaGCCTGTACATCTTCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: QVHFNDENVPQSGMLSYGTALFL*PVHLPE Trigger: TTCAGGAAGATGTACAGGCCAGAGGAACAAGGCAGT...GCCGTATGACAACATCCCACTCTGTGGGACATTCTCATCATTGAAGTGGACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR-3UTR CCA 90 bp | GGACGGGAGAAGCCAAAACACAGCAAGGACATCGCCCGCATCACCTTCGATGTGTCTTGTTTTACCCTCTaGAATAGTAGGTTTACAGTT | + |
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Preference number: 2 (lower is better) Translates to: GREKPKHSKDIARITFDVSCFTL*NSRFTV Trigger: AACTGTAAACCTACTATTCCAGAGGGTAAAACAAGA...CACATCGAAGGTGATGCGGGCGATGTCCTTGCTGTGTTTTGGCTTCTCCCGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR-3UTR TCA 90 bp | GCTTGGGGTCTGCAGTGTACCCTAGGTAACCAAGCTGACTCCATCCTAACAGATCTAGCCTTGAATTCTTaGTATTCTTGTTTTACCCTC | + |
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Preference number: 2 (lower is better) Translates to: AWGLQCTLGNQADSILTDLALNS*YSCFTL Trigger: GAGGGTAAAACAAGAATATCAAGAATTCAAGGCTAG...ATCTGTTAGGATGGAGTCAGCTTGGTTACCTAGGGTACACTGCAGACCCCAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR-3UTR GCA 90 bp | TGTGTACAAGCAAAATCCCCGAGACCTCTTTGGCAGCCTCAACGTGAAAGCTACAGGTTTACAGTTTTGTaGATGTTACTACATCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: CVQAKSPRPLWQPQRESYRFTVL*MLLHLA Trigger: AGCCAGATGTAGTAACATGCACAAAACTGTAAACCT...GTAGCTTTCACGTTGAGGCTGCCAAAGAGGTCTCGGGGATTTTGCTTGTACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR GCA 72 bp | CCTCCAGGGAGCTCCTCCGTTGGACTTCCTCGCTGCTaGAAGGCCTGGGCCATATGCTGCTGGGCATCTCCT | + |
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Preference number: 3 (lower is better) Translates to: PPGSSSVGLPRC*KAWAICCWASP Trigger: AGGAGATGCCCAGCAGCATATGGCCCAGGCCTTGCAGCAGCGAGGAAGTCCAACGGAGGAGCTCCCTGGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR CCA 72 bp | ATATGCTGCTGGGCATCTCCTCCACCCTTCGCCATGTaGTGGAGGGGGCTGATCGATGGCAGTGGCACGGGC | + |
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Preference number: 3 (lower is better) Translates to: ICCWASPPPFAM*WRGLIDGSGTG Trigger: GCCCGTGCCACTGCCATCGATCAGCCCCCTCCACCACATGGCGAAGGGTGGAGGAGATGCCCAGCAGCATAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR CCA 72 bp | CTTCCTCGCTGCTGCAAGGCCTGGGCCATATGCTGCTaGGCATCTCCTCCACCCTTCGCCATGTGGTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: LPRCCKAWAICC*ASPPPFAMWWR Trigger: CCTCCACCACATGGCGAAGGGTGGAGGAGATGCCCAGCAGCATATGGCCCAGGCCTTGCAGCAGCGAGGAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR TCA 72 bp | GAGGCTGACGGGGCCTCCCTTCCTGCCTCTTGTCACTaGCAGGTCCTGGAGACCTTGCTGCTACGTGGAGTG | + |
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Preference number: 3 (lower is better) Translates to: EADGASLPASCH*QVLETLLLRGV Trigger: CACTCCACGTAGCAGCAAGGTCTCCAGGACCTGTCAGTGACAAGAGGCAGGAAGGGAGGCCCCGTCAGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR GCA 72 bp | GTTGGACTTCCTCGCTGCTGCAAGGCCTGGGCCATATaGTGCTGGGCATCTCCTCCACCCTTCGCCATGTGG | + |
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Preference number: 3 (lower is better) Translates to: VGLPRCCKAWAI*CWASPPPFAMW Trigger: CCACATGGCGAAGGGTGGAGGAGATGCCCAGCAGCATATGGCCCAGGCCTTGCAGCAGCGAGGAAGTCCAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR CCA 72 bp | TCTCCACTCCTTTCTGGTCCTCCCTGGCTTCTTCCCTaGCCTACCACTGACCTGTGGGGGCACAGGCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: SPLLSGPPWLLP*PTTDLWGHRLW Trigger: CCAGAGCCTGTGCCCCCACAGGTCAGTGGTAGGCCAGGGAAGAAGCCAGGGAGGACCAGAAAGGAGTGGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR-3UTR CAA 90 bp | TGTGTACAAGCAAAATCCCCGAGACCTCTTTGGCAGCCTCAACGTGAAAGCTACCAGGGAGCTCCTCCGTaGGACTTCCTCGCTGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: CVQAKSPRPLWQPQRESYQGAPP*DFLAAA Trigger: TGCAGCAGCGAGGAAGTCCAACGGAGGAGCTCCCTG...GTAGCTTTCACGTTGAGGCTGCCAAAGAGGTCTCGGGGATTTTGCTTGTACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR-3UTR CAA 90 bp | TGTGTACAAGCAAAATCCCCGAGACCTCTTTGGCAGCCTCAACGTGAAAGCTACAAGGCACCATCAGGCTaGGGGTCTGCAGTGTACCCT | + |
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Preference number: 3 (lower is better) Translates to: CVQAKSPRPLWQPQRESYKAPSG*GSAVYP Trigger: AGGGTACACTGCAGACCCCAAGCCTGATGGTGCCTT...GTAGCTTTCACGTTGAGGCTGCCAAAGAGGTCTCGGGGATTTTGCTTGTACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR GCA 72 bp | GCCTTGTTCCTCTGGCCTGTACATCTTCCTGAAGAATaGTACCTGTCTTCCCTCCACTCCTGCCTTCCACAT | + |
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Preference number: 3 (lower is better) Translates to: ALFLWPVHLPEE*YLSSLHSCLPH Trigger: ATGTGGAAGGCAGGAGTGGAGGGAAGACAGGTAGCATTCTTCAGGAAGATGTACAGGCCAGAGGAACAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR GCA 72 bp | GCACGGGCAGAGACACCTCCACTCCTAATGAGATCATaGTTTGAGCCTGTGCTGAAAGACTGGTTCCATGTG | + |
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Preference number: 3 (lower is better) Translates to: ARAETPPLLMRS*FEPVLKDWFHV Trigger: CACATGGAACCAGTCTTTCAGCACAGGCTCAAAGCATGATCTCATTAGGAGTGGAGGTGTCTCTGCCCGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR TCA 72 bp | GGCAGAGACACCTCCACTCCTAATGAGATCATGCTTTaGGCCTGTGCTGAAAGACTGGTTCCATGTGACACA | + |
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Preference number: 3 (lower is better) Translates to: GRDTSTPNEIML*ACAERLVPCDT Trigger: TGTGTCACATGGAACCAGTCTTTCAGCACAGGCTCAAAGCATGATCTCATTAGGAGTGGAGGTGTCTCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR-3UTR CAA 90 bp | AAAGAGTACTCAGGTCAGAGACCAATCTGTCATGCAACCCTCGGATCCATGTATGATCTGCACACTGCCTaGTTCCTCTGGCCTGTACAT | + |
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Preference number: 3 (lower is better) Translates to: KEYSGQRPICHATLGSMYDLHTA*FLWPVH Trigger: ATGTACAGGCCAGAGGAACAAGGCAGTGTGCAGATC...ATACATGGATCCGAGGGTTGCATGACAGATTGGTCTCTGACCTGAGTACTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| 3UTR GCA 72 bp | CCTAAAAGAGTACTCAGGTCAGAGACCAATCTGTCATaGAACCCTCGGATCCATGTATCCCATAAACTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: PKRVLRSETNLS*NPRIHVSHKLP Trigger: GGGGAGTTTATGGGATACATGGATCCGAGGGTTGCATGACAGATTGGTCTCTGACCTGAGTACTCTTTTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| 3UTR CCA 72 bp | TCCATCCTAACAGATCTGCACACTGCCTTGTTCCTCTaGCCTGTACATCTTCCTGAAGAATGCTACCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SILTDLHTALFL*PVHLPEECYLS Trigger: AGACAGGTAGCATTCTTCAGGAAGATGTACAGGCCAGAGGAACAAGGCAGTGTGCAGATCTGTTAGGATGGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| 3UTR CCA 72 bp | CTAATGAGATCATGCTTTGAGCCTGTGCTGAAAGACTaGTTCCATGTGACACAGGAGGGTAGTAAAGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: LMRSCFEPVLKD*FHVTQEGSKGT Trigger: GGTGCCTTTACTACCCTCCTGTGTCACATGGAACCAGTCTTTCAGCACAGGCTCAAAGCATGATCTCATTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| 3UTR-3UTR CAA 90 bp | CCGAGACCTCTTTGGCAGCCTCAACGTGAAAGCTACATTCTATGGACTCTACTCGTGATTTCCAAGGAGTaGGCCCTAAAAGAGTACTCA | + |
|
Preference number: 3 (lower is better) Translates to: PRPLWQPQRESYILWTLLVISKE*ALKEYS Trigger: TGAGTACTCTTTTAGGGCCAACTCCTTGGAAATCAC...GAGTAGAGTCCATAGAATGTAGCTTTCACGTTGAGGCTGCCAAAGAGGTCTCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| 3UTR CCA 72 bp | CTTCGATGTGTACAAGCAAAATCCCCGAGACCTCTTTaGCAGCCTCAACGTGAAAGCTACATTCTATGGACT | + |
|
Preference number: 3 (lower is better) Translates to: LRCVQAKSPRPL*QPQRESYILWT Trigger: AGTCCATAGAATGTAGCTTTCACGTTGAGGCTGCCAAAGAGGTCTCGGGGATTTTGCTTGTACACATCGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| 3UTR CAA 72 bp | GAGGACTTCTTCCAGCTGCTGGAGGACGACACGTGCTaGATGGTGCTTGAGCAGGGCCAGAGCTGGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: EDFFQLLEDDTC*MVLEQGQSWSP Trigger: GGGGCTCCAGCTCTGGCCCTGCTCAAGCACCATCAAGCACGTGTCGTCCTCCAGCAGCTGGAAGAAGTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR CCA 90 bp | AGGCCTGGGCCATATGCTGCTGGGCATCTCCTCCACCCTTCGCCATGTGGTGGACCTCCCTCAGCGCTCTaGCTGTGGCCATTTCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: RPGPYAAGHLLHPSPCGGPPSAL*LWPFQP Trigger: AGGTTGAAATGGCCACAGCCAGAGCGCTGAGGGAGG...TCCACCACATGGCGAAGGGTGGAGGAGATGCCCAGCAGCATATGGCCCAGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR CCA 90 bp | CCGAGACCTCTTTGGCAGCCTCAACGTGAAAGCTACATTCTATGGACTCTACTCGGCGACGACGACCCCTaGGTGGCCCTGGGCCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PRPLWQPQRESYILWTLLGDDDP*VALGQH Trigger: GTGCTGGCCCAGGGCCACCCAGGGGTCGTCGTCGCC...GAGTAGAGTCCATAGAATGTAGCTTTCACGTTGAGGCTGCCAAAGAGGTCTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCCACAGTGGGGCTGCTTAGGTCTCCACTCCTTTCTGGTCCTCCCTGGCTTAATACACGGCTGCCATaGCGGCTACAGGCAAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPTVGLLRSPLLSGPPWLNTRLP*RLQARA Trigger: GGCTCTTGCCTGTAGCCGCCATGGCAGCCGTGTATT...AAGCCAGGGAGGACCAGAAAGGAGTGGAGACCTAAGCAGCCCCACTGTGGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR TCA 90 bp | GATATGCCAACCAGCGTGAGGCTGACGGGGCCTCCCTTCCTGCCTCTTGTCACTCAGGCGCTCAGGTCCTaGAGGCGATTCAAGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: DMPTSVRLTGPPFLPLVTQALRS*RRFKKV Trigger: AACCTTCTTGAATCGCCTTCAGGACCTGAGCGCCTG...AGTGACAAGAGGCAGGAAGGGAGGCCCCGTCAGCCTCACGCTGGTTGGCATATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR TCA 90 bp | AGGCCTGGGCCATATGCTGCTGGGCATCTCCTCCACCCTTCGCCATGTGGTGGAAGGGCTGCCATCTGCTaGAGAATTCCGAGAACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPGPYAAGHLLHPSPCGGRAAIC*RIPRTQ Trigger: CTGAGTTCTCGGAATTCTTCAGCAGATGGCAGCCCT...TCCACCACATGGCGAAGGGTGGAGGAGATGCCCAGCAGCATATGGCCCAGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR GCA 90 bp | GGGAGAAGCCAAAACACAGCAAGGACATCGCCCGCATCACCTTCGATGTGTACACTCCTCCTCCTCCTCTaGCTCCGCAGGACGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRSQNTARTSPASPSMCTLLLLL*LRRTPQ Trigger: CTGAGGCGTCCTGCGGAGGCAGAGGAGGAGGAGGAG...TGTACACATCGAAGGTGATGCGGGCGATGTCCTTGCTGTGTTTTGGCTTCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR GCA 90 bp | AGGCCTGGGCCATATGCTGCTGGGCATCTCCTCCACCCTTCGCCATGTGGTGGAACCACGAAGCTGCCATaGGTGTCTCCACAGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RPGPYAAGHLLHPSPCGGTTKLP*VSPQKN Trigger: GTTCTTCTGTGGAGACACGCATGGCAGCTTCGTGGT...TCCACCACATGGCGAAGGGTGGAGGAGATGCCCAGCAGCATATGGCCCAGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCCACAGTGGGGCTGCTTAGGTCTCCACTCCTTTCTGGTCCTCCCTGGCTTTACCAGTCCTGTTCGTaGCCAAGGCTAGAGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPTVGLLRSPLLSGPPWLYQSCS*PRLEPE Trigger: CTCAGGCTCTAGCCTTGGCCACGAACAGGACTGGTA...AAGCCAGGGAGGACCAGAAAGGAGTGGAGACCTAAGCAGCCCCACTGTGGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR TCA 90 bp | GGGAGAAGCCAAAACACAGCAAGGACATCGCCCGCATCACCTTCGATGTGTACAAAGACCTGGGCTTGGTaGGTCCCAACCCTGCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRSQNTARTSPASPSMCTKTWAW*VPTLRQ Trigger: CTGCCGCAGGGTTGGGACTCACCAAGCCCAGGTCTT...TGTACACATCGAAGGTGATGCGGGCGATGTCCTTGCTGTGTTTTGGCTTCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR GCA 90 bp | TGTGTACAAGCAAAATCCCCGAGACCTCTTTGGCAGCCTCAACGTGAAAGCTACGGTGAGTCCCAACCCTaGGGCAGGCTTCCACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CVQAKSPRPLWQPQRESYGESQP*GRLPPG Trigger: CCCTGGTGGAAGCCTGCCGCAGGGTTGGGACTCACC...GTAGCTTTCACGTTGAGGCTGCCAAAGAGGTCTCGGGGATTTTGCTTGTACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR GCA 90 bp | GCTTGGGGTCTGCAGTGTACCCTAGGTAACCAAGCTGACTCCATCCTAACAGATCCGAGCCCCCAAAGCTaGTCCACTCCAGATGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: AWGLQCTLGNQADSILTDPSPQS*STPDGI Trigger: GATGCCATCTGGAGTGGAGCAGCTTTGGGGGCTCGG...ATCTGTTAGGATGGAGTCAGCTTGGTTACCTAGGGTACACTGCAGACCCCAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR CCA 90 bp | AGGTCAGAGACCAATCTGTCATGCAACCCTCGGATCCATGTATCCCATAAACTCCCACGAAGCGCAAGTTaGGGCGCAGAGCGGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RSETNLSCNPRIHVSHKLPRSAS*GAERPT Trigger: TGTGGGCCGCTCTGCGCCCCAACTTGCGCTTCGTGG...GAGTTTATGGGATACATGGATCCGAGGGTTGCATGACAGATTGGTCTCTGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR TCA 90 bp | ATCGCCCGCATCACCTTCGATGTGTACAAGCAAAATCCCCGAGACCTCTTTGGCGCCAAGGCTAGAGCCTaGGCCTCCACTTCCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: IARITFDVYKQNPRDLFGAKARA*ASTSFK Trigger: TTTGAAGGAAGTGGAGGCTCAGGCTCTAGCCTTGGC...GCCAAAGAGGTCTCGGGGATTTTGCTTGTACACATCGAAGGTGATGCGGGCGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR TCA 90 bp | CCGAGACCTCTTTGGCAGCCTCAACGTGAAAGCTACATTCTATGGACTCTACTCCCTGCAGCAGAGTTCTaGCCACGAAGCTGCCATGCG | + |
|
Preference number: 4 (lower is better) Translates to: PRPLWQPQRESYILWTLLPAAEF*PRSCHA Trigger: CGCATGGCAGCTTCGTGGTCAGAACTCTGCTGCAGG...GAGTAGAGTCCATAGAATGTAGCTTTCACGTTGAGGCTGCCAAAGAGGTCTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR TCA 90 bp | GCTTGGGGTCTGCAGTGTACCCTAGGTAACCAAGCTGACTCCATCCTAACAGATGCAGCTCAGGGGAAGTaGTTGCATCCAGCAAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: AWGLQCTLGNQADSILTDAAQGK*LHPASA Trigger: AGCGCTTGCTGGATGCAATCACTTCCCCTGAGCTGC...ATCTGTTAGGATGGAGTCAGCTTGGTTACCTAGGGTACACTGCAGACCCCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR TCA 90 bp | GCTTGGGGTCTGCAGTGTACCCTAGGTAACCAAGCTGACTCCATCCTAACAGATCTGCTTGTGTGTCACTaGGGGGCTACTCAGGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: AWGLQCTLGNQADSILTDLLVCH*GATQDG Trigger: GCCATCCTGAGTAGCCCCTCAGTGACACACAAGCAG...ATCTGTTAGGATGGAGTCAGCTTGGTTACCTAGGGTACACTGCAGACCCCAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR CCA 90 bp | AAAGAGTACTCAGGTCAGAGACCAATCTGTCATGCAACCCTCGGATCCATGTATACGACGACCCCTGGGTaGCCCTGGGCCAGCACCATT | + |
|
Preference number: 4 (lower is better) Translates to: KEYSGQRPICHATLGSMYTTTPG*PWASTI Trigger: AATGGTGCTGGCCCAGGGCCACCCAGGGGTCGTCGT...ATACATGGATCCGAGGGTTGCATGACAGATTGGTCTCTGACCTGAGTACTCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR CCA 90 bp | CCGAGACCTCTTTGGCAGCCTCAACGTGAAAGCTACATTCTATGGACTCTACTCGAGCCAGCGGGGCTTTaGGCCAGAGTCAGAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PRPLWQPQRESYILWTLLEPAGL*ARVRSC Trigger: ACAGCTTCTGACTCTGGCCCAAAGCCCCGCTGGCTC...GAGTAGAGTCCATAGAATGTAGCTTTCACGTTGAGGCTGCCAAAGAGGTCTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR CCA 90 bp | GATGTTGTCATACGGCCTAGGACGGGAGAAGCCAAAACACAGCAAGGACATCGCATGCCCGCCTCCGCTTaGCCACAGTACTTTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DVVIRPRTGEAKTQQGHRMPASA*PQYFAV Trigger: AACAGCAAAGTACTGTGGCCAAGCGGAGGCGGGCAT...GCGATGTCCTTGCTGTGTTTTGGCTTCTCCCGTCCTAGGCCGTATGACAACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR TCA 90 bp | CCGAGACCTCTTTGGCAGCCTCAACGTGAAAGCTACATTCTATGGACTCTACTCGTGGCCATTTCAACCTaGTGCTCTGCAGGCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PRPLWQPQRESYILWTLLVAIST*CSAGTA Trigger: GGCTGTGCCTGCAGAGCATCAGGTTGAAATGGCCAC...GAGTAGAGTCCATAGAATGTAGCTTTCACGTTGAGGCTGCCAAAGAGGTCTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR TCA 90 bp | AGCCCCACAGTGGGGCTGCTTAGGTCTCCACTCCTTTCTGGTCCTCCCTGGCTTTGGCCAAAAGGATCTTaGATCAACTCCTGGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPTVGLLRSPLLSGPPWLWPKGS*INSWFF Trigger: AAAGAACCAGGAGTTGATTCAAGATCCTTTTGGCCA...AAGCCAGGGAGGACCAGAAAGGAGTGGAGACCTAAGCAGCCCCACTGTGGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR GCA 90 bp | GCTTGGGGTCTGCAGTGTACCCTAGGTAACCAAGCTGACTCCATCCTAACAGATAAGTATAGAGCTCAATaGCCGCCTCCGCTTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AWGLQCTLGNQADSILTDKYRAQ*PPPLGH Trigger: GTGGCCAAGCGGAGGCGGGCATTGAGCTCTATACTT...ATCTGTTAGGATGGAGTCAGCTTGGTTACCTAGGGTACACTGCAGACCCCAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR TCA 90 bp | TGTGTACAAGCAAAATCCCCGAGACCTCTTTGGCAGCCTCAACGTGAAAGCTACGCCAAGGAGCATAGCTaGCCCTGGAAGTGGTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: CVQAKSPRPLWQPQRESYAKEHS*PWKWSL Trigger: TAAGGACCACTTCCAGGGTCAGCTATGCTCCTTGGC...GTAGCTTTCACGTTGAGGCTGCCAAAGAGGTCTCGGGGATTTTGCTTGTACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR TCA 90 bp | GATGTTGTCATACGGCCTAGGACGGGAGAAGCCAAAACACAGCAAGGACATCGCGGGGGCTCTGCACAATaGAATGCCTCAAATAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: DVVIRPRTGEAKTQQGHRGGSAQ*NASNNS Trigger: GCTGTTATTTGAGGCATTTCATTGTGCAGAGCCCCC...GCGATGTCCTTGCTGTGTTTTGGCTTCTCCCGTCCTAGGCCGTATGACAACATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR TCA 90 bp | GCTTGGGGTCTGCAGTGTACCCTAGGTAACCAAGCTGACTCCATCCTAACAGATATGGCATCAAATACATaGGAGCCAGCGGGGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AWGLQCTLGNQADSILTDMASNT*EPAGLW Trigger: CCAAAGCCCCGCTGGCTCTCATGTATTTGATGCCAT...ATCTGTTAGGATGGAGTCAGCTTGGTTACCTAGGGTACACTGCAGACCCCAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR GCA 90 bp | TGTGTACAAGCAAAATCCCCGAGACCTCTTTGGCAGCCTCAACGTGAAAGCTACGTACCTCCCAAGACCTaGAGCAGAGTTCTGACCACG | + |
|
Preference number: 4 (lower is better) Translates to: CVQAKSPRPLWQPQRESYVPPKT*SRVLTT Trigger: CGTGGTCAGAACTCTGCTGCAGGTCTTGGGAGGTAC...GTAGCTTTCACGTTGAGGCTGCCAAAGAGGTCTCGGGGATTTTGCTTGTACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR GCA 90 bp | CCGAGACCTCTTTGGCAGCCTCAACGTGAAAGCTACATTCTATGGACTCTACTCGCATCCAGCAAGCGCTaGAAAGGGAAGTTCGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: PRPLWQPQRESYILWTLLASSKR*KGKFAM Trigger: CATTGCGAACTTCCCTTTGCAGCGCTTGCTGGATGC...GAGTAGAGTCCATAGAATGTAGCTTTCACGTTGAGGCTGCCAAAGAGGTCTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| 3UTR CAA 72 bp | CAAGCTGACTCCATCCTAACAGATCTGCACACTGCCTaGTTCCTCTGGCCTGTACATCTTCCTGAAGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: QADSILTDLHTA*FLWPVHLPEEC Trigger: GCATTCTTCAGGAAGATGTACAGGCCAGAGGAACAAGGCAGTGTGCAGATCTGTTAGGATGGAGTCAGCTTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR GCA 90 bp | AAAGAGTACTCAGGTCAGAGACCAATCTGTCATGCAACCCTCGGATCCATGTATCTCAGGGGAAGTGATTaGATCCAGCAAGCGCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KEYSGQRPICHATLGSMYLRGSD*IQQALQ Trigger: TTGCAGCGCTTGCTGGATGCAATCACTTCCCCTGAG...ATACATGGATCCGAGGGTTGCATGACAGATTGGTCTCTGACCTGAGTACTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR CCA 90 bp | AAAGAGTACTCAGGTCAGAGACCAATCTGTCATGCAACCCTCGGATCCATGTATCTGCTCCACTCCAGATaGCATCTAATACACGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KEYSGQRPICHATLGSMYLLHSR*HLIHGC Trigger: GCAGCCGTGTATTAGATGCCATCTGGAGTGGAGCAG...ATACATGGATCCGAGGGTTGCATGACAGATTGGTCTCTGACCTGAGTACTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| 3UTR CAA 72 bp | GTCTACAATCCCAGGACCCAGCAAACTAACACAGAATaGCTAAGTTTGGGAGCAGGCTGCACTACACCAACA | + |
|
Preference number: 4 (lower is better) Translates to: VYNPRTQQTNTE*LSLGAGCTTPT Trigger: TGTTGGTGTAGTGCAGCCTGCTCCCAAACTTAGCAATTCTGTGTTAGTTTGCTGGGTCCTGGGATTGTAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR GCA 90 bp | GCTTGGGGTCTGCAGTGTACCCTAGGTAACCAAGCTGACTCCATCCTAACAGATAGCAATCGAGGTAGCTaGAGCAAAGCACTTTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: AWGLQCTLGNQADSILTDSNRGS*SKALCN Trigger: ATTACAAAGTGCTTTGCTGCAGCTACCTCGATTGCT...ATCTGTTAGGATGGAGTCAGCTTGGTTACCTAGGGTACACTGCAGACCCCAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR CCA 90 bp | AAAGAGTACTCAGGTCAGAGACCAATCTGTCATGCAACCCTCGGATCCATGTATAAATACAGCAAATGCTaGAGCAGTAGAGACCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KEYSGQRPICHATLGSMYKYSKC*SSRDPS Trigger: ACTTGGGTCTCTACTGCTCCAGCATTTGCTGTATTT...ATACATGGATCCGAGGGTTGCATGACAGATTGGTCTCTGACCTGAGTACTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS GCA 90 bp | GCTGACAGCGCCCGTCGGAAATATCCAAGAGCCTCCGGGCTCAGATaGGGGAGAGCCTCGGGGGCCTGCTCCGCACGCGCGGCTGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: ADSARRKYPRASGLR*GRASGACSARAAAG Trigger: GCCGGCAGCCGCGCGTGCGGAGCAGGCCCCCGAGGCTCTCCCGCATCTGAGCCCGGAGGCTCTTGGATATTTCCGACGGGCGCTGTCAGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS CCA 90 bp | CCAACCCTGCGGCAGGCTTCCACCAGGGCGACGACGACCCCTGGGTaGCCCTGGGCCAGCACCATTTCCAAGGCAGGGCTCAGCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PTLRQASTRATTTPG*PWASTISKAGLSSS Trigger: TGAGGAGCTGAGCCCTGCCTTGGAAATGGTGCTGGCCCAGGGCCACCCAGGGGTCGTCGTCGCCCTGGTGGAAGCCTGCCGCAGGGTTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS CCA 90 bp | AGTCCCAACCCTGCGGCAGGCTTCCACCAGGGCGACGACGACCCCTaGGTGGCCCTGGGCCAGCACCATTTCCAAGGCAGGGCTCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPNPAAGFHQGDDDP*VALGQHHFQGRAQL Trigger: GAGCTGAGCCCTGCCTTGGAAATGGTGCTGGCCCAGGGCCACCCAGGGGTCGTCGTCGCCCTGGTGGAAGCCTGCCGCAGGGTTGGGACT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS CCA 90 bp | CTGCGGCAGGCTTCCACCAGGGCGACGACGACCCCTGGGTGGCCCTaGGCCAGCACCATTTCCAAGGCAGGGCTCAGCTCCTCAAACACA | + |
|
Preference number: 5 (lower is better) Translates to: LRQASTRATTTPGWP*ASTISKAGLSSSNT Trigger: TGTGTTTGAGGAGCTGAGCCCTGCCTTGGAAATGGTGCTGGCCCAGGGCCACCCAGGGGTCGTCGTCGCCCTGGTGGAAGCCTGCCGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS GCA 90 bp | CCTCAAATAACAGCTGCAAGACCTGGGCTTGGTGAGTCCCAACCCTaGGGCAGGCTTCCACCAGGGCGACGACGACCCCTGGGTGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PQITAARPGLGESQP*GRLPPGRRRPLGGP Trigger: AGGGCCACCCAGGGGTCGTCGTCGCCCTGGTGGAAGCCTGCCGCAGGGTTGGGACTCACCAAGCCCAGGTCTTGCAGCTGTTATTTGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS GCA 90 bp | TCACACACTTCAGCGGCTAGTCCCAGGACTAGCTCCTCCAGAGTTTaGGAGGGACCACCCTCCTCCTCTTCCTCCTCCTCCTCCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SHTSAASPRTSSSRV*EGPPSSSSSSSSSA Trigger: GGCAGAGGAGGAGGAGGAGGAAGAGGAGGAGGGTGGTCCCTCGCAAACTCTGGAGGAGCTAGTCCTGGGACTAGCCGCTGAAGTGTGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS CCA 90 bp | GTAATACGTGGACCCCACACCGATGACAAGCCACGAAGCGCAAGTTaGGGCGCAGAGCGGCCCACACTCGACACAGGGGTTTCAAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VIRGPHTDDKPRSAS*GAERPTLDTGVSKD Trigger: GTCCTTTGAAACCCCTGTGTCGAGTGTGGGCCGCTCTGCGCCCCAACTTGCGCTTCGTGGCTTGTCATCGGTGTGGGGTCCACGTATTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR CAA 90 bp | GGACGGGAGAAGCCAAAACACAGCAAGGACATCGCCCGCATCACCTTCGATGTGAGAGCCAGCGGGGCTTaGGGCCAGAGTCAGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GREKPKHSKDIARITFDVRASGA*GQSQKL Trigger: CAGCTTCTGACTCTGGCCCAAAGCCCCGCTGGCTCT...CACATCGAAGGTGATGCGGGCGATGTCCTTGCTGTGTTTTGGCTTCTCCCGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS TCA 90 bp | GGTAGCTGCAGCAAAGCACTTTGTAATACGTGGACCCCACACCGATaGCAAGCCACGAAGCGCAAGTTGGGGCGCAGAGCGGCCCACACT | + |
|
Preference number: 5 (lower is better) Translates to: GSCSKALCNTWTPHR*QATKRKLGRRAAHT Trigger: AGTGTGGGCCGCTCTGCGCCCCAACTTGCGCTTCGTGGCTTGTCATCGGTGTGGGGTCCACGTATTACAAAGTGCTTTGCTGCAGCTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS GCA 90 bp | CGGGGCTTGCCTCTCTCGGACTCCAAAAGAGTACCTCCCAAGACCTaGAGCAGAGTTCTGACCACGAAGCTGCCATGCGTGTCTCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: RGLPLSDSKRVPPKT*SRVLTTKLPCVSPQ Trigger: CTGTGGAGACACGCATGGCAGCTTCGTGGTCAGAACTCTGCTGCAGGTCTTGGGAGGTACTCTTTTGGAGTCCGAGAGAGGCAAGCCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS GCA 90 bp | GAGCTGAAGTCCTCTGTGTTTCAGACGACTGGGAGCCACGGGGCTTaGCTCTCTCGGACTCCAAAAGAGTACCTCCCAAGACCTGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ELKSSVFQTTGSHGA*LSRTPKEYLPRPAA Trigger: TGCTGCAGGTCTTGGGAGGTACTCTTTTGGAGTCCGAGAGAGGCAAGCCCCGTGGCTCCCAGTCGTCTGAAACACAGAGGACTTCAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS GCA 90 bp | GAGCCCCCAAAGCTGCTCCACTCCAGATGGCATCTAATACACGGCTaGCATGGCGGCTACAGGCAAGAGCCACATACTGTCCCTTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: EPPKLLHSRWHLIHG*HGGYRQEPHTVPLG Trigger: CCCTAAAGGGACAGTATGTGGCTCTTGCCTGTAGCCGCCATGGCAGCCGTGTATTAGATGCCATCTGGAGTGGAGCAGCTTTGGGGGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS CCA 90 bp | GCACACGACGACGCTGCTTGTGTGTCACTGAGGGGCTACTCAGGATaGCATCAAATACATGAGAGCCAGCGGGGCTTTGGGCCAGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AHDDAACVSLRGYSG*HQIHESQRGFGPES Trigger: TGACTCTGGCCCAAAGCCCCGCTGGCTCTCATGTATTTGATGCCATCCTGAGTAGCCCCTCAGTGACACACAAGCAGCGTCGTCGTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS TCA 90 bp | TGCTTGTGTGTCACTGAGGGGCTACTCAGGATGGCATCAAATACATaGGAGCCAGCGGGGCTTTGGGCCAGAGTCAGAAGCTGTGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: CLCVTEGLLRMASNT*EPAGLWARVRSCGP Trigger: CGGACCACAGCTTCTGACTCTGGCCCAAAGCCCCGCTGGCTCTCATGTATTTGATGCCATCCTGAGTAGCCCCTCAGTGACACACAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGACCAATCTGTCATGCAACCCTCGGATCCATGTATCCCATAAACTCCCCCCTGCAAGACCTGGGCTaGGTGAGTCCCAACCCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: QRPICHATLGSMYPINSPLQDLG*VSPNPA Trigger: CGCAGGGTTGGGACTCACCAAGCCCAGGTCTTGCAG...GGGGGAGTTTATGGGATACATGGATCCGAGGGTTGCATGACAGATTGGTCTCTG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR CAA 90 bp | AACCCCGACCTCCTTGCAGCTTCCTTTAACTCTCTGATCTCCACTCTGCCCTCCACACGACGACGCTGCTaGTGTGTCACTGAGGGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: NPDLLAASFNSLISTLPSTRRRC*CVTEGL Trigger: TAGCCCCTCAGTGACACACAAGCAGCGTCGTCGTGT...GGAGGGCAGAGTGGAGATCAGAGAGTTAAAGGAAGCTGCAAGGAGGTCGGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS GCA 90 bp | ACAAGGGACAGCAGCTCAGGGGAAGTGATTGCATCCAGCAAGCGCTaGAAAGGGAAGTTCGCAATGGGATGCTCAGCCAAGGAGCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: TRDSSSGEVIASSKR*KGKFAMGCSAKEHS Trigger: GCTATGCTCCTTGGCTGAGCATCCCATTGCGAACTTCCCTTTGCAGCGCTTGCTGGATGCAATCACTTCCCCTGAGCTGCTGTCCCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS CCA 90 bp | CCCAAAGCTGCTCCACTCCAGATGGCATCTAATACACGGCTGCCATaGCGGCTACAGGCAAGAGCCACATACTGTCCCTTTAGGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PKAAPLQMASNTRLP*RLQARATYCPFRVF Trigger: GAAGACCCTAAAGGGACAGTATGTGGCTCTTGCCTGTAGCCGCCATGGCAGCCGTGTATTAGATGCCATCTGGAGTGGAGCAGCTTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR CAA 90 bp | GATATGCCAACCAGCGTGAGGCTGACGGGGCCTCCCTTCCTGCCTCTTGTCACTGTGGCCAAAAGGATCTaGAATCAACTCCTGGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: DMPTSVRLTGPPFLPLVTVAKRI*NQLLVL Trigger: AAGAACCAGGAGTTGATTCAAGATCCTTTTGGCCAC...AGTGACAAGAGGCAGGAAGGGAGGCCCCGTCAGCCTCACGCTGGTTGGCATATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS TCA 90 bp | TGCAGCATTTCGCTACCAGTCCTGTTCGTGGCCAAGGCTAGAGCCTaGGCCTCCACTTCCTTCAAAATATTGCGCGCCATCAACTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: CSISLPVLFVAKARA*ASTSFKILRAINSR Trigger: ACGAGAGTTGATGGCGCGCAATATTTTGAAGGAAGTGGAGGCTCAGGCTCTAGCCTTGGCCACGAACAGGACTGGTAGCGAAATGCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS GCA 90 bp | GTACCTCCCAAGACCTGCAGCAGAGTTCTGACCACGAAGCTGCCATaGGTGTCTCCACAGAAGAACAGAAAATCATCACACACTTCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: VPPKTCSRVLTTKLP*VSPQKNRKSSHTSA Trigger: CGCTGAAGTGTGTGATGATTTTCTGTTCTTCTGTGGAGACACGCATGGCAGCTTCGTGGTCAGAACTCTGCTGCAGGTCTTGGGAGGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS GCA 90 bp | AGAGCCACATACTGTCCCTTTAGGGTCTTCAGCACACGACGACGCTaGTTGTGTGTCACTGAGGGGCTACTCAGGATGGCATCAAATACA | + |
|
Preference number: 5 (lower is better) Translates to: RATYCPFRVFSTRRR*LCVTEGLLRMASNT Trigger: TGTATTTGATGCCATCCTGAGTAGCCCCTCAGTGACACACAAGCAGCGTCGTCGTGTGCTGAAGACCCTAAAGGGACAGTATGTGGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS GCA 90 bp | TCAAGTATAGAGCTCAATGCCCGCCTCCGCTTGGCCACAGTACTTTaGTGTTGTTCCCAAGCCTCTCGCCTCTTCAAGAAGGTAGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSIELNARLRLATVL*CCSQASRLFKKVVR Trigger: CCTTACTACCTTCTTGAAGAGGCGAGAGGCTTGGGAACAACAGCAAAGTACTGTGGCCAAGCGGAGGCGGGCATTGAGCTCTATACTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGACCAATCTGTCATGCAACCCTCGGATCCATGTATCCCATAAACTCCCCCCACAGTACTTTGCTGTaGTTCCCAAGCCTCTCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QRPICHATLGSMYPINSPHSTLL*FPSLSP Trigger: AGGCGAGAGGCTTGGGAACAACAGCAAAGTACTGTG...GGGGGAGTTTATGGGATACATGGATCCGAGGGTTGCATGACAGATTGGTCTCTG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR CAA 90 bp | TGTGTACAAGCAAAATCCCCGAGACCTCTTTGGCAGCCTCAACGTGAAAGCTACCTTGGCCACAGTACTTaGCTGTTGTTCCCAAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: CVQAKSPRPLWQPQRESYLGHST*LLFPSL Trigger: GAGGCTTGGGAACAACAGCAAAGTACTGTGGCCAAG...GTAGCTTTCACGTTGAGGCTGCCAAAGAGGTCTCGGGGATTTTGCTTGTACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR CAA 90 bp | AAAGAGTACTCAGGTCAGAGACCAATCTGTCATGCAACCCTCGGATCCATGTATAATGCCCGCCTCCGCTaGGCCACAGTACTTTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KEYSGQRPICHATLGSMYNARLR*ATVLCC Trigger: ACAGCAAAGTACTGTGGCCAAGCGGAGGCGGGCATT...ATACATGGATCCGAGGGTTGCATGACAGATTGGTCTCTGACCTGAGTACTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR CAA 90 bp | GATGTTGTCATACGGCCTAGGACGGGAGAAGCCAAAACACAGCAAGGACATCGCGAACCTCAAAATCAGTaGGTTTACATTCCCGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DVVIRPRTGEAKTQQGHREPQNQ*VYIPEL Trigger: CAGCTCGGGAATGTAAACCAACTGATTTTGAGGTTC...GCGATGTCCTTGCTGTGTTTTGGCTTCTCCCGTCCTAGGCCGTATGACAACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS GCA 90 bp | CTCAGACTTCGAAGTACAAGTCCAGGATTAGAAAAATACAGCAAATaGTGGAGCAGTAGAGACCCAAGTACAGTCACCTCCCTCAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRLRSTSPGLEKYSK*WSSRDPSTVTSLSA Trigger: AGCGCTGAGGGAGGTGACTGTACTTGGGTCTCTACTGCTCCAGCATTTGCTGTATTTTTCTAATCCTGGACTTGTACTTCGAAGTCTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS CCA 90 bp | AGACTTCGAAGTACAAGTCCAGGATTAGAAAAATACAGCAAATGCTaGAGCAGTAGAGACCCAAGTACAGTCACCTCCCTCAGCGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLRSTSPGLEKYSKC*SSRDPSTVTSLSAL Trigger: CAGAGCGCTGAGGGAGGTGACTGTACTTGGGTCTCTACTGCTCCAGCATTTGCTGTATTTTTCTAATCCTGGACTTGTACTTCGAAGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS TCA 90 bp | GTAGTAAGGGCCACATTTCGAGCCACATGGTGGCCAAAAGGATCTTaGATCAACTCCTGGTTCTTTTCTCCCAATTCAGCAGCAATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VVRATFRATWWPKGS*INSWFFSPNSAAIS Trigger: GGAAATTGCTGCTGAATTGGGAGAAAAGAACCAGGAGTTGATTCAAGATCCTTTTGGCCACCATGTGGCTCGAAATGTGGCCCTTACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS-3UTR CAA 90 bp | TGTGTACAAGCAAAATCCCCGAGACCTCTTTGGCAGCCTCAACGTGAAAGCTACCAAAAGCTGGAGATCTaGTCGGTGATAAATACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CVQAKSPRPLWQPQRESYQKLEI*SVINTA Trigger: TGCTGTATTTATCACCGACAAGATCTCCAGCTTTTG...GTAGCTTTCACGTTGAGGCTGCCAAAGAGGTCTCGGGGATTTTGCTTGTACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS TCA 90 bp | GTGATAAATACAGCAATGTCCTTCAGAAAGCAGGCGCTCAGGTCCTaGAGGCGATTCAAGAAGGTTTTAGGAACCTCAAAATCAGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VINTAMSFRKQALRS*RRFKKVLGTSKSVG Trigger: ACCAACTGATTTTGAGGTTCCTAAAACCTTCTTGAATCGCCTTCAGGACCTGAGCGCCTGCTTTCTGAAGGACATTGCTGTATTTATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS GCA 72 bp | CGGGAGAGCCTCGGGGGCCTGCTCCGCACGCGCGGCTaGCGGCAGCCGGGGATAACCATCGCGGCCGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RESLGGLLRTRG*RQPGITIAAGR Trigger: CCTCCCGGCCGCGATGGTTATCCCCGGCTGCCGGCAGCCGCGCGTGCGGAGCAGGCCCCCGAGGCTCTCCCG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS GCA 72 bp | GCCCGTCGGAAATATCCAAGAGCCTCCGGGCTCAGATaGGGGAGAGCCTCGGGGGCCTGCTCCGCACGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: ARRKYPRASGLR*GRASGACSARA Trigger: CGCGCGTGCGGAGCAGGCCCCCGAGGCTCTCCCGCATCTGAGCCCGGAGGCTCTTGGATATTTCCGACGGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS CCA 72 bp | CGGCAGGCTTCCACCAGGGCGACGACGACCCCTGGGTaGCCCTGGGCCAGCACCATTTCCAAGGCAGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RQASTRATTTPG*PWASTISKAGL Trigger: GAGCCCTGCCTTGGAAATGGTGCTGGCCCAGGGCCACCCAGGGGTCGTCGTCGCCCTGGTGGAAGCCTGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS CCA 72 bp | CCTGCGGCAGGCTTCCACCAGGGCGACGACGACCCCTaGGTGGCCCTGGGCCAGCACCATTTCCAAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PAAGFHQGDDDP*VALGQHHFQGR Trigger: CCTGCCTTGGAAATGGTGCTGGCCCAGGGCCACCCAGGGGTCGTCGTCGCCCTGGTGGAAGCCTGCCGCAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS CCA 72 bp | GCTTCCACCAGGGCGACGACGACCCCTGGGTGGCCCTaGGCCAGCACCATTTCCAAGGCAGGGCTCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASTRATTTPGWP*ASTISKAGLSS Trigger: GGAGCTGAGCCCTGCCTTGGAAATGGTGCTGGCCCAGGGCCACCCAGGGGTCGTCGTCGCCCTGGTGGAAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS GCA 72 bp | ACAGCTGCAAGACCTGGGCTTGGTGAGTCCCAACCCTaGGGCAGGCTTCCACCAGGGCGACGACGACCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: TAARPGLGESQP*GRLPPGRRRPL Trigger: CAGGGGTCGTCGTCGCCCTGGTGGAAGCCTGCCGCAGGGTTGGGACTCACCAAGCCCAGGTCTTGCAGCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS CCA 72 bp | GGACCCCACACCGATGACAAGCCACGAAGCGCAAGTTaGGGCGCAGAGCGGCCCACACTCGACACAGGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GPHTDDKPRSAS*GAERPTLDTGV Trigger: AACCCCTGTGTCGAGTGTGGGCCGCTCTGCGCCCCAACTTGCGCTTCGTGGCTTGTCATCGGTGTGGGGTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS GCA 72 bp | TCAGCGGCTAGTCCCAGGACTAGCTCCTCCAGAGTTTaGGAGGGACCACCCTCCTCCTCTTCCTCCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SAASPRTSSSRV*EGPPSSSSSSS Trigger: GGAGGAGGAGGAAGAGGAGGAGGGTGGTCCCTCGCAAACTCTGGAGGAGCTAGTCCTGGGACTAGCCGCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS CCA 72 bp | ACCCAAGTACAGTCACCTCCCTCAGCGCTCTGGCTGTaGCCATTTCAACCTGATGCTCTGCAGGCACAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: TQVQSPPSALWL*PFQPDALQAQP Trigger: GGGCTGTGCCTGCAGAGCATCAGGTTGAAATGGCCACAGCCAGAGCGCTGAGGGAGGTGACTGTACTTGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS CAA 72 bp | AGCCAACAAAGCAGCAAAGAGAGGCACGCAGGCTGCTaGCCGGGACGGGGGCTCTGCACAATGAAATGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SQQSSKERHAGC*PGRGLCTMKCL Trigger: GAGGCATTTCATTGTGCAGAGCCCCCGTCCCGGCAAGCAGCCTGCGTGCCTCTCTTTGCTGCTTTGTTGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS CAA 90 bp | CGAGCTGAAGTCCTCTGTGTTTCAGACGACTGGGAGCCACGGGGCTaGCCTCTCTCGGACTCCAAAAGAGTACCTCCCAAGACCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RAEVLCVSDDWEPRG*PLSDSKRVPPKTCS Trigger: GCTGCAGGTCTTGGGAGGTACTCTTTTGGAGTCCGAGAGAGGCAAGCCCCGTGGCTCCCAGTCGTCTGAAACACAGAGGACTTCAGCTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS CAA 90 bp | GGGGCTACTCAGGATGGCATCAAATACATGAGAGCCAGCGGGGCTTaGGGCCAGAGTCAGAAGCTGTGGTCCGGTCAAGGCACTCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: GATQDGIKYMRASGA*GQSQKLWSGQGTQT Trigger: AGTCTGAGTGCCTTGACCGGACCACAGCTTCTGACTCTGGCCCAAAGCCCCGCTGGCTCTCATGTATTTGATGCCATCCTGAGTAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS TCA 72 bp | ACGCAGGCTGCTTGCCGGGACGGGGGCTCTGCACAATaGAATGCCTCAAATAACAGCTGCAAGACCTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TQAACRDGGSAQ*NASNNSCKTWA Trigger: AGCCCAGGTCTTGCAGCTGTTATTTGAGGCATTTCATTGTGCAGAGCCCCCGTCCCGGCAAGCAGCCTGCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS CAA 72 bp | CAGGATGGCATCAAATACATGAGAGCCAGCGGGGCTTaGGGCCAGAGTCAGAAGCTGTGGTCCGGTCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: QDGIKYMRASGA*GQSQKLWSGQG Trigger: GCCTTGACCGGACCACAGCTTCTGACTCTGGCCCAAAGCCCCGCTGGCTCTCATGTATTTGATGCCATCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS TCA 72 bp | AGCAAAGCACTTTGTAATACGTGGACCCCACACCGATaGCAAGCCACGAAGCGCAAGTTGGGGCGCAGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: SKALCNTWTPHR*QATKRKLGRRA Trigger: CGCTCTGCGCCCCAACTTGCGCTTCGTGGCTTGTCATCGGTGTGGGGTCCACGTATTACAAAGTGCTTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS GCA 72 bp | TCTGCCTCCGCAGGACGCCTCAGCAATCGAGGTAGCTaGAGCAAAGCACTTTGTAATACGTGGACCCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: SASAGRLSNRGS*SKALCNTWTPH Trigger: GTGTGGGGTCCACGTATTACAAAGTGCTTTGCTGCAGCTACCTCGATTGCTGAGGCGTCCTGCGGAGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS GCA 72 bp | CCTCTCTCGGACTCCAAAAGAGTACCTCCCAAGACCTaGAGCAGAGTTCTGACCACGAAGCTGCCATGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: PLSDSKRVPPKT*SRVLTTKLPCV Trigger: CACGCATGGCAGCTTCGTGGTCAGAACTCTGCTGCAGGTCTTGGGAGGTACTCTTTTGGAGTCCGAGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS GCA 72 bp | ATAAGCCAACAAAGCAGCAAAGAGAGGCACGCAGGCTaGTTGCCGGGACGGGGGCTCTGCACAATGAAATGC | + |
|
Preference number: 6 (lower is better) Translates to: ISQQSSKERHAG*LPGRGLCTMKC Trigger: GCATTTCATTGTGCAGAGCCCCCGTCCCGGCAAGCAGCCTGCGTGCCTCTCTTTGCTGCTTTGTTGGCTTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS GCA 72 bp | GAGCTCAATGCCCGCCTCCGCTTGGCCACAGTACTTTaGTGTTGTTCCCAAGCCTCTCGCCTCTTCAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ELNARLRLATVL*CCSQASRLFKK Trigger: CTTCTTGAAGAGGCGAGAGGCTTGGGAACAACAGCAAAGTACTGTGGCCAAGCGGAGGCGGGCATTGAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS CCA 72 bp | GACGCTGCTTGTGTGTCACTGAGGGGCTACTCAGGATaGCATCAAATACATGAGAGCCAGCGGGGCTTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: DAACVSLRGYSG*HQIHESQRGFG Trigger: CCCAAAGCCCCGCTGGCTCTCATGTATTTGATGCCATCCTGAGTAGCCCCTCAGTGACACACAAGCAGCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS TCA 72 bp | ACCAGCAGCACCTGCTCCAAGAGTCTAGAGCTCGTCTaGTCCCGAAGAAACAGGAGTAGAGGGCTGCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: TSSTCSKSLELV*SRRNRSRGLPS Trigger: AGATGGCAGCCCTCTACTCCTGTTTCTTCGGGATCAGACGAGCTCTAGACTCTTGGAGCAGGTGCTGCTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS GCA 72 bp | AGCAGCTCAGGGGAAGTGATTGCATCCAGCAAGCGCTaGAAAGGGAAGTTCGCAATGGGATGCTCAGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSSGEVIASSKR*KGKFAMGCSAK Trigger: CTTGGCTGAGCATCCCATTGCGAACTTCCCTTTGCAGCGCTTGCTGGATGCAATCACTTCCCCTGAGCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS GCA 72 bp | TACTGTCCCTTTAGGGTCTTCAGCACACGACGACGCTaGTTGTGTGTCACTGAGGGGCTACTCAGGATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: YCPFRVFSTRRR*LCVTEGLLRMA Trigger: TGCCATCCTGAGTAGCCCCTCAGTGACACACAAGCAGCGTCGTCGTGTGCTGAAGACCCTAAAGGGACAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS GCA 72 bp | AAGCTGCTCCACTCCAGATGGCATCTAATACACGGCTaGCATGGCGGCTACAGGCAAGAGCCACATACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: KLLHSRWHLIHG*HGGYRQEPHTV Trigger: GACAGTATGTGGCTCTTGCCTGTAGCCGCCATGGCAGCCGTGTATTAGATGCCATCTGGAGTGGAGCAGCTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
||
| CDS CCA 72 bp | AAAGCTCCTGCAGCATTTCGCTACCAGTCCTGTTCGTaGCCAAGGCTAGAGCCTGAGCCTCCACTTCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: KAPAAFRYQSCS*PRLEPEPPLPS Trigger: TGAAGGAAGTGGAGGCTCAGGCTCTAGCCTTGGCCACGAACAGGACTGGTAGCGAAATGCTGCAGGAGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS CCA 72 bp | TTGCATCCAGCAAGCGCTGCAAAGGGAAGTTCGCAATaGGATGCTCAGCCAAGGAGCATAGCTGACCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LHPASAAKGSSQ*DAQPRSIADPG Trigger: TCCAGGGTCAGCTATGCTCCTTGGCTGAGCATCCCATTGCGAACTTCCCTTTGCAGCGCTTGCTGGATGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS CCA 72 bp | GCTCCACTCCAGATGGCATCTAATACACGGCTGCCATaGCGGCTACAGGCAAGAGCCACATACTGTCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: APLQMASNTRLP*RLQARATYCPF Trigger: AAAGGGACAGTATGTGGCTCTTGCCTGTAGCCGCCATGGCAGCCGTGTATTAGATGCCATCTGGAGTGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS CAA 72 bp | TGTCCCTTTAGGGTCTTCAGCACACGACGACGCTGCTaGTGTGTCACTGAGGGGCTACTCAGGATGGCATCA | + |
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Preference number: 6 (lower is better) Translates to: CPFRVFSTRRRC*CVTEGLLRMAS Trigger: TGATGCCATCCTGAGTAGCCCCTCAGTGACACACAAGCAGCGTCGTCGTGTGCTGAAGACCCTAAAGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS CAA 72 bp | CAATGCCCGCCTCCGCTTGGCCACAGTACTTTGCTGTaGTTCCCAAGCCTCTCGCCTCTTCAAGAAGGTAGT | + |
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Preference number: 6 (lower is better) Translates to: QCPPPLGHSTLL*FPSLSPLQEGS Trigger: ACTACCTTCTTGAAGAGGCGAGAGGCTTGGGAACAACAGCAAAGTACTGTGGCCAAGCGGAGGCGGGCATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS CAA 72 bp | AGAGCTCAATGCCCGCCTCCGCTTGGCCACAGTACTTaGCTGTTGTTCCCAAGCCTCTCGCCTCTTCAAGAA | + |
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Preference number: 6 (lower is better) Translates to: RAQCPPPLGHST*LLFPSLSPLQE Trigger: TTCTTGAAGAGGCGAGAGGCTTGGGAACAACAGCAAAGTACTGTGGCCAAGCGGAGGCGGGCATTGAGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS CAA 90 bp | TATAGAGCTCAATGCCCGCCTCCGCTTGGCCACAGTACTTTGCTGTaGTTCCCAAGCCTCTCGCCTCTTCAAGAAGGTAGTAAGGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: YRAQCPPPLGHSTLL*FPSLSPLQEGSKGH Trigger: GTGGCCCTTACTACCTTCTTGAAGAGGCGAGAGGCTTGGGAACAACAGCAAAGTACTGTGGCCAAGCGGAGGCGGGCATTGAGCTCTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS TCA 72 bp | CCAAAAGAGTACCTCCCAAGACCTGCAGCAGAGTTCTaGCCACGAAGCTGCCATGCGTGTCTCCACAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: PKEYLPRPAAEF*PRSCHACLHRR Trigger: TCTTCTGTGGAGACACGCATGGCAGCTTCGTGGTCAGAACTCTGCTGCAGGTCTTGGGAGGTACTCTTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS CAA 72 bp | CAGTCTTCAAGTATAGAGCTCAATGCCCGCCTCCGCTaGGCCACAGTACTTTGCTGTTGTTCCCAAGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: QSSSIELNARLR*ATVLCCCSQAS Trigger: AGAGGCTTGGGAACAACAGCAAAGTACTGTGGCCAAGCGGAGGCGGGCATTGAGCTCTATACTTGAAGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS CAA 90 bp | TTCAAGTATAGAGCTCAATGCCCGCCTCCGCTTGGCCACAGTACTTaGCTGTTGTTCCCAAGCCTCTCGCCTCTTCAAGAAGGTAGTAAG | + |
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Preference number: 6 (lower is better) Translates to: FKYRAQCPPPLGHST*LLFPSLSPLQEGSK Trigger: CTTACTACCTTCTTGAAGAGGCGAGAGGCTTGGGAACAACAGCAAAGTACTGTGGCCAAGCGGAGGCGGGCATTGAGCTCTATACTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS TCA 72 bp | AGGAACCTCAAAATCAGTTGGTTTACATTCCCGAGCTaGAGTCCTCTGTGTTTCAGACGACTGGGAGCCACG | + |
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Preference number: 6 (lower is better) Translates to: RNLKISWFTFPS*SPLCFRRLGAT Trigger: CGTGGCTCCCAGTCGTCTGAAACACAGAGGACTTCAGCTCGGGAATGTAAACCAACTGATTTTGAGGTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS GCA 72 bp | AAGACCTGCAGCAGAGTTCTGACCACGAAGCTGCCATaGGTGTCTCCACAGAAGAACAGAAAATCATCACAC | + |
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Preference number: 6 (lower is better) Translates to: KTCSRVLTTKLP*VSPQKNRKSSH Trigger: GTGTGATGATTTTCTGTTCTTCTGTGGAGACACGCATGGCAGCTTCGTGGTCAGAACTCTGCTGCAGGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS GCA 72 bp | AGCTCGTCTGATCCCGAAGAAACAGGAGTAGAGGGCTaGCATCTGCTGAAGAATTCCGAGAACTCAGGTAAT | + |
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Preference number: 6 (lower is better) Translates to: SSSDPEETGVEG*HLLKNSENSGN Trigger: ATTACCTGAGTTCTCGGAATTCTTCAGCAGATGGCAGCCCTCTACTCCTGTTTCTTCGGGATCAGACGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS TCA 72 bp | ACAGCAATGTCCTTCAGAAAGCAGGCGCTCAGGTCCTaGAGGCGATTCAAGAAGGTTTTAGGAACCTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: TAMSFRKQALRS*RRFKKVLGTSK Trigger: TTTTGAGGTTCCTAAAACCTTCTTGAATCGCCTTCAGGACCTGAGCGCCTGCTTTCTGAAGGACATTGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS GCA 72 bp | CGAAGTACAAGTCCAGGATTAGAAAAATACAGCAAATaGTGGAGCAGTAGAGACCCAAGTACAGTCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: RSTSPGLEKYSK*WSSRDPSTVTS Trigger: GGAGGTGACTGTACTTGGGTCTCTACTGCTCCAGCATTTGCTGTATTTTTCTAATCCTGGACTTGTACTTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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| CDS CCA 72 bp | AGTACAAGTCCAGGATTAGAAAAATACAGCAAATGCTaGAGCAGTAGAGACCCAAGTACAGTCACCTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: STSPGLEKYSKC*SSRDPSTVTSL Trigger: GAGGGAGGTGACTGTACTTGGGTCTCTACTGCTCCAGCATTTGCTGTATTTTTCTAATCCTGGACTTGTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019441.9 |
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