Pregenerated sensors for NOP53 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041560Ensembl transcript IDs: ENSMUST00000044158.13
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TACGCACTAGCAAAGTGTGGTGGTGTTAAGCTGAAATCCCAGAATTaGGAGGAGGAAGCAGGAAGATCAGAGGTAACCCTCGGTTACATA | + |
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Preference number: 1 (lower is better) Translates to: YALAKCGGVKLKSQN*EEEAGRSEVTLGYI Trigger: TATGTAACCGAGGGTTACCTCTGATCTTCCTGCTTCCTCCTCCCAATTCTGGGATTTCAGCTTAACACCACCACACTTTGCTAGTGCGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| 3UTR CCA 90 bp | GTTCTGAGGTTCAGCAGCCACATTGTGGCTCACAACCATCTGAAATaGGATCTGATGTCCTCTTCTGGTGTGTTTGAAGTTAGCTACAGT | + |
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Preference number: 1 (lower is better) Translates to: VLRFSSHIVAHNHLK*DLMSSSGVFEVSYS Trigger: ACTGTAGCTAACTTCAAACACACCAGAAGAGGACATCAGATCCCATTTCAGATGGTTGTGAGCCACAATGTGGCTGCTGAACCTCAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| 3UTR-3UTR GCA 90 bp | CATAAGAAACCATTGGATCCCCAAAACCTAACTGTATATGAGGCTGTGAGGACCGGTAAGAGCACAGACTaGTCTTCGGGAGGTCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: HKKPLDPQNLTVYEAVRTGKSTD*SSGGPE Trigger: CTCAGGACCTCCCGAAGAGCAGTCTGTGCTCTTACC...GGTCCTCACAGCCTCATATACAGTTAGGTTTTGGGGATCCAATGGTTTCTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| 3UTR-3UTR CCA 90 bp | ACGTCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTTAGATATAATAAGAGCTGTGCTAAGACCTaGGCAGCAGAGGAGGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: TSSSGVSEDSYSVLRYNKSCAKT*AAEEGQ Trigger: CTGCCCCTCCTCTGCTGCCCAGGTCTTAGCACAGCT...CTTATTATATCTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| 3UTR-3UTR CCA 90 bp | CTGAAAATTGAGCAAAGATCTGAAGGAACTGAAGAAGAAACTCATGATCCACAGCCCAGTGAGGGGCTGTaGGTGTGGCTCAGTGATCGA | + |
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Preference number: 2 (lower is better) Translates to: LKIEQRSEGTEEETHDPQPSEGL*VWLSDR Trigger: TCGATCACTGAGCCACACCCACAGCCCCTCACTGGG...CTGTGGATCATGAGTTTCTTCTTCAGTTCCTTCAGATCTTTGCTCAATTTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| 3UTR-3UTR TCA 90 bp | AAAAATAACGGAAGTTCTAAGATAAATAGAATGCCAAGAGTGACAGATGCAACCCCTAGAATCCCCCAGTaGGGGGCTGTGGGTGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: KNNGSSKINRMPRVTDATPRIPQ*GAVGVA Trigger: AGCCACACCCACAGCCCCTCACTGGGGGATTCTAGG...GGTTGCATCTGTCACTCTTGGCATTCTATTTATCTTAGAACTTCCGTTATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| 3UTR-3UTR TCA 90 bp | ACGTCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTTAGATATAATAAGCCACATATTCAGCACTaGAGGCAGACTGTGGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: TSSSGVSEDSYSVLRYNKPHIQH*RQTVVE Trigger: CTCCACCACAGTCTGCCTTCAGTGCTGAATATGTGG...CTTATTATATCTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGACGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| 3UTR-3UTR TCA 90 bp | ACGTCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTTAGATATAATAAGGTGGTGGTGTTAAGCTaGAATCCCAGAATTGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: TSSSGVSEDSYSVLRYNKVVVLS*NPRIGR Trigger: CCTCCCAATTCTGGGATTTCAGCTTAACACCACCAC...CTTATTATATCTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGACGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| 3UTR-3UTR CCA 90 bp | CTGAAAATTGAGCAAAGATCTGAAGGAACTGAAGAAGAAACTCATGATCCACAGGAAGGCAGACTGTGGTaGAGAGGAGCTGTGCTAAGA | + |
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Preference number: 2 (lower is better) Translates to: LKIEQRSEGTEEETHDPQEGRLW*RGAVLR Trigger: TCTTAGCACAGCTCCTCTCCACCACAGTCTGCCTTC...CTGTGGATCATGAGTTTCTTCTTCAGTTCCTTCAGATCTTTGCTCAATTTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| 3UTR-3UTR CCA 90 bp | AAAAATAACGGAAGTTCTAAGATAAATAGAATGCCAAGAGTGACAGATGCAACCGAGGGGCTGTGGGTGTaGCTCAGTGATCGAGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: KNNGSSKINRMPRVTDATEGLWV*LSDRVF Trigger: GAACACTCGATCACTGAGCCACACCCACAGCCCCTC...GGTTGCATCTGTCACTCTTGGCATTCTATTTATCTTAGAACTTCCGTTATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| 3UTR-3UTR CCA 90 bp | ACGTCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTTAGATATAATAAGATGATCCACAGAAAGTaGGTATGGCTCAATGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: TSSSGVSEDSYSVLRYNKMIHRK*VWLNEE Trigger: CTCTTCATTGAGCCATACCCACTTTCTGTGGATCAT...CTTATTATATCTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGACGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| 3UTR-3UTR TCA 90 bp | AAAAATAACGGAAGTTCTAAGATAAATAGAATGCCAAGAGTGACAGATGCAACCATAGGACACAGGTTATaGGAGACCACAGTGAGATCT | + |
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Preference number: 2 (lower is better) Translates to: KNNGSSKINRMPRVTDATIGHRL*ETTVRS Trigger: AGATCTCACTGTGGTCTCTCATAACCTGTGTCCTAT...GGTTGCATCTGTCACTCTTGGCATTCTATTTATCTTAGAACTTCCGTTATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| 3UTR CCA 72 bp | TGTGCTCTCCACATATTCAGCACTGAAGGCAGACTGTaGTGGAGAGGAGCTGTGCTAAGACCTGGGCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: CALHIFSTEGRL*WRGAVLRPGQQ Trigger: CTGCTGCCCAGGTCTTAGCACAGCTCCTCTCCACCACAGTCTGCCTTCAGTGCTGAATATGTGGAGAGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| 3UTR CCA 72 bp | TTCAGCAGCCACATTGTGGCTCACAACCATCTGAAATaGGATCTGATGTCCTCTTCTGGTGTGTTTGAAGTT | + |
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Preference number: 3 (lower is better) Translates to: FSSHIVAHNHLK*DLMSSSGVFEV Trigger: AACTTCAAACACACCAGAAGAGGACATCAGATCCCATTTCAGATGGTTGTGAGCCACAATGTGGCTGCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| 3UTR GCA 72 bp | AAACAGGAAATGAAGAGGGACCCCGATCTCCTAAAATaGTTGGATCTTGGACACTTAACTGGAATAGTCACT | + |
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Preference number: 3 (lower is better) Translates to: KQEMKRDPDLLK*LDLGHLTGIVT Trigger: AGTGACTATTCCAGTTAAGTGTCCAAGATCCAAGCATTTTAGGAGATCGGGGTCCCTCTTCATTTCCTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| 3UTR-3UTR CAA 90 bp | CATAAGAAACCATTGGATCCCCAAAACCTAACTGTATATGAGGCTGTGAGGACCGATCTCCTAAAATGCTaGGATCTTGGACACTTAACT | + |
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Preference number: 3 (lower is better) Translates to: HKKPLDPQNLTVYEAVRTDLLKC*DLGHLT Trigger: AGTTAAGTGTCCAAGATCCAAGCATTTTAGGAGATC...GGTCCTCACAGCCTCATATACAGTTAGGTTTTGGGGATCCAATGGTTTCTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| 3UTR TCA 72 bp | AATAGGACACAGGTTATGAGAGACCACAGTGAGATCTaGAAATTGAGCAAAGATCTGAAGGAACTGAAGAAG | + |
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Preference number: 3 (lower is better) Translates to: NRTQVMRDHSEI*KLSKDLKELKK Trigger: CTTCTTCAGTTCCTTCAGATCTTTGCTCAATTTTCAGATCTCACTGTGGTCTCTCATAACCTGTGTCCTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR GCA 90 bp | CACATATTCAGCACTGAAGGCAGACTGTGGTGGAGAGGAGCTGTGCTAAGACCTCTCAGTGCAGCCTGCTaGACCCGCAGCTTGCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: HIFSTEGRLWWRGAVLRPLSAAC*TRSLRA Trigger: TGCTCGCAAGCTGCGGGTGCAGCAGGCTGCACTGAG...AGGTCTTAGCACAGCTCCTCTCCACCACAGTCTGCCTTCAGTGCTGAATATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR CCA 90 bp | ACGTCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTTAGATATAATAAGCGCGCTTCTTGTTTCTaGGGCCCCGCCGCCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: TSSSGVSEDSYSVLRYNKRASCF*GPAAAA Trigger: GGCGGCGGCGGCGGGGCCCCAGAAACAAGAAGCGCG...CTTATTATATCTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR CCA 90 bp | CACATATTCAGCACTGAAGGCAGACTGTGGTGGAGAGGAGCTGTGCTAAGACCTTCCACTGCAGGCACCTaGGAAGGCTTGATGTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: HIFSTEGRLWWRGAVLRPSTAGT*EGLMWR Trigger: CCTCCACATCAAGCCTTCCCAGGTGCCTGCAGTGGA...AGGTCTTAGCACAGCTCCTCTCCACCACAGTCTGCCTTCAGTGCTGAATATGTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR TCA 90 bp | CATAAGAAACCATTGGATCCCCAAAACCTAACTGTATATGAGGCTGTGAGGACCCAGGAGCCTGGTACTTaGGCCGTCCCAGCCTTCGGG | + |
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Preference number: 4 (lower is better) Translates to: HKKPLDPQNLTVYEAVRTQEPGT*AVPAFG Trigger: CCCGAAGGCTGGGACGGCTCAAGTACCAGGCTCCTG...GGTCCTCACAGCCTCATATACAGTTAGGTTTTGGGGATCCAATGGTTTCTTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR CCA 90 bp | CATAAGAAACCATTGGATCCCCAAAACCTAACTGTATATGAGGCTGTGAGGACCTGGGAAGGCTTGATGTaGAGGCGTTGTGGCCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: HKKPLDPQNLTVYEAVRTWEGLM*RRCGRL Trigger: GAGGCGGCCACAACGCCTCCACATCAAGCCTTCCCA...GGTCCTCACAGCCTCATATACAGTTAGGTTTTGGGGATCCAATGGTTTCTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR CCA 90 bp | CATAAGAAACCATTGGATCCCCAAAACCTAACTGTATATGAGGCTGTGAGGACCCCCAGGTTTGGCCTTTaGTGTGGGAGGGCTAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: HKKPLDPQNLTVYEAVRTPRFGL*CGRAKE Trigger: CTCCTTAGCCCTCCCACACCAAAGGCCAAACCTGGG...GGTCCTCACAGCCTCATATACAGTTAGGTTTTGGGGATCCAATGGTTTCTTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR TCA 90 bp | CATAAGAAACCATTGGATCCCCAAAACCTAACTGTATATGAGGCTGTGAGGACCAAAAGTTCTTGGTGCTaGAGCCGGGCTGCCCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: HKKPLDPQNLTVYEAVRTKSSWC*SRAALS Trigger: ACTGAGGGCAGCCCGGCTTCAGCACCAAGAACTTTT...GGTCCTCACAGCCTCATATACAGTTAGGTTTTGGGGATCCAATGGTTTCTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR GCA 90 bp | CTGAAAATTGAGCAAAGATCTGAAGGAACTGAAGAAGAAACTCATGATCCACAGACAAGCCACCGGTCGTaGGCTCCTGTAGCCGGACGT | + |
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Preference number: 4 (lower is better) Translates to: LKIEQRSEGTEEETHDPQTSHRS*APVAGR Trigger: ACGTCCGGCTACAGGAGCGCACGACCGGTGGCTTGT...CTGTGGATCATGAGTTTCTTCTTCAGTTCCTTCAGATCTTTGCTCAATTTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR CCA 90 bp | ACGTCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTTAGATATAATAAGACACGGACTCCTGGGTaGCAGCTTGCTCTGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TSSSGVSEDSYSVLRYNKTRTPG*QLALRW Trigger: CCACCTCAGAGCAAGCTGCCACCCAGGAGTCCGTGT...CTTATTATATCTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGACGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR CCA 90 bp | ACGTCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTTAGATATAATAAGGACCAGCAGCACCAGTaGGTGAGATCTCGGTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: TSSSGVSEDSYSVLRYNKDQQHQ*VRSRWS Trigger: GGACCACCGAGATCTCACCCACTGGTGCTGCTGGTC...CTTATTATATCTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGACGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR GCA 90 bp | CATAAGAAACCATTGGATCCCCAAAACCTAACTGTATATGAGGCTGTGAGGACCATTAGGGACCTGATGTaGGAGGATGTCTTTGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: HKKPLDPQNLTVYEAVRTIRDLM*EDVFGS Trigger: GCTCCCAAAGACATCCTCGCACATCAGGTCCCTAAT...GGTCCTCACAGCCTCATATACAGTTAGGTTTTGGGGATCCAATGGTTTCTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR GCA 90 bp | CTGAAAATTGAGCAAAGATCTGAAGGAACTGAAGAAGAAACTCATGATCCACAGGCACGGCCTGCCTCATaGTCATCCTCACCATCAGAC | + |
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Preference number: 4 (lower is better) Translates to: LKIEQRSEGTEEETHDPQARPAS*SSSPSD Trigger: GTCTGATGGTGAGGATGAGCATGAGGCAGGCCGTGC...CTGTGGATCATGAGTTTCTTCTTCAGTTCCTTCAGATCTTTGCTCAATTTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR GCA 90 bp | CATAAGAAACCATTGGATCCCCAAAACCTAACTGTATATGAGGCTGTGAGGACCAACTCAGAGCTGAGCTaGACATCAATGTCAGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: HKKPLDPQNLTVYEAVRTNSELS*TSMSGA Trigger: GGCTCCTGACATTGATGTGCAGCTCAGCTCTGAGTT...GGTCCTCACAGCCTCATATACAGTTAGGTTTTGGGGATCCAATGGTTTCTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR CCA 90 bp | CATAAGAAACCATTGGATCCCCAAAACCTAACTGTATATGAGGCTGTGAGGACCGTCCAGAGGGTTGTCTaGGTTCCAGAGGTCATAGAA | + |
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Preference number: 4 (lower is better) Translates to: HKKPLDPQNLTVYEAVRTVQRVV*VPEVIE Trigger: TTCTATGACCTCTGGAACCCAGACAACCCTCTGGAC...GGTCCTCACAGCCTCATATACAGTTAGGTTTTGGGGATCCAATGGTTTCTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR TCA 90 bp | ACGTCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTTAGATATAATAAGCTTCAGTGTCCTGAGTaGGCCAGACAACTCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: TSSSGVSEDSYSVLRYNKLQCPE*ARQLRA Trigger: AGCTCTGAGTTGTCTGGCTCACTCAGGACACTGAAG...CTTATTATATCTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGACGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR GCA 90 bp | CTGAAAATTGAGCAAAGATCTGAAGGAACTGAAGAAGAAACTCATGATCCACAGCTGGGCAGTTCGCCCTaGTTTGCCAGTTTCTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: LKIEQRSEGTEEETHDPQLGSSP*FASFSH Trigger: ATGGGAGAAACTGGCAAAGCAGGGCGAACTGCCCAG...CTGTGGATCATGAGTTTCTTCTTCAGTTCCTTCAGATCTTTGCTCAATTTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR CCA 90 bp | CTGAAAATTGAGCAAAGATCTGAAGGAACTGAAGAAGAAACTCATGATCCACAGCGCTCAATGATGTCCTaGGGCCCAGGTTTGGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: LKIEQRSEGTEEETHDPQRSMMS*GPGLAF Trigger: AAAGGCCAAACCTGGGCCCCAGGACATCATTGAGCG...CTGTGGATCATGAGTTTCTTCTTCAGTTCCTTCAGATCTTTGCTCAATTTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR GCA 90 bp | CTGAAAATTGAGCAAAGATCTGAAGGAACTGAAGAAGAAACTCATGATCCACAGTCGCTCCAGCTTTTCTaGCTCTTTCTCACGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LKIEQRSEGTEEETHDPQSLQLF*LFLTLQ Trigger: CTGCAGCGTGAGAAAGAGGCAGAAAAGCTGGAGCGA...CTGTGGATCATGAGTTTCTTCTTCAGTTCCTTCAGATCTTTGCTCAATTTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR TCA 90 bp | AAAAATAACGGAAGTTCTAAGATAAATAGAATGCCAAGAGTGACAGATGCAACCCGAAGCAGGGCCTGGTaGTCTTCAAAGGTTGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: KNNGSSKINRMPRVTDATRSRAW*SSKVGL Trigger: CAACCCAACCTTTGAAGATCACCAGGCCCTGCTTCG...GGTTGCATCTGTCACTCTTGGCATTCTATTTATCTTAGAACTTCCGTTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR TCA 90 bp | AAAAATAACGGAAGTTCTAAGATAAATAGAATGCCAAGAGTGACAGATGCAACCCTGGCTTCAGTGTCCTaGGTGAGCCAGACAACTCAG | + |
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Preference number: 4 (lower is better) Translates to: KNNGSSKINRMPRVTDATLASVS*VSQTTQ Trigger: CTGAGTTGTCTGGCTCACTCAGGACACTGAAGCCAG...GGTTGCATCTGTCACTCTTGGCATTCTATTTATCTTAGAACTTCCGTTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR GCA 90 bp | AAAAATAACGGAAGTTCTAAGATAAATAGAATGCCAAGAGTGACAGATGCAACCAGGAATCACCTCCACTaGAGGCACCTGGGAAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: KNNGSSKINRMPRVTDATRNHLH*RHLGRL Trigger: AAGCCTTCCCAGGTGCCTGCAGTGGAGGTGATTCCT...GGTTGCATCTGTCACTCTTGGCATTCTATTTATCTTAGAACTTCCGTTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR GCA 90 bp | AAAAATAACGGAAGTTCTAAGATAAATAGAATGCCAAGAGTGACAGATGCAACCGTTGTAGGAGGCTCCTaGAGGAATCACCTCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: KNNGSSKINRMPRVTDATVVGGS*RNHLHC Trigger: GCAGTGGAGGTGATTCCTGCAGGAGCCTCCTACAAC...GGTTGCATCTGTCACTCTTGGCATTCTATTTATCTTAGAACTTCCGTTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR CCA 90 bp | AAAAATAACGGAAGTTCTAAGATAAATAGAATGCCAAGAGTGACAGATGCAACCTCAATGTCAGGAGCCTaGTACTTGAGCCGTCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: KNNGSSKINRMPRVTDATSMSGA*YLSRPS Trigger: GCTGGGACGGCTCAAGTACCAGGCTCCTGACATTGA...GGTTGCATCTGTCACTCTTGGCATTCTATTTATCTTAGAACTTCCGTTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR TCA 90 bp | CTGAAAATTGAGCAAAGATCTGAAGGAACTGAAGAAGAAACTCATGATCCACAGGCAGGGATCTTAGAATaGTTCTCAAGGGCAAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LKIEQRSEGTEEETHDPQAGILE*FSRARS Trigger: TGACCTTGCCCTTGAGAATCATTCTAAGATCCCTGC...CTGTGGATCATGAGTTTCTTCTTCAGTTCCTTCAGATCTTTGCTCAATTTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR TCA 90 bp | CTGAAAATTGAGCAAAGATCTGAAGGAACTGAAGAAGAAACTCATGATCCACAGTCTTCTGGAAGCTCTTaGACCTGTCTCGGAGAATGT | + |
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Preference number: 4 (lower is better) Translates to: LKIEQRSEGTEEETHDPQSSGSS*TCLGEC Trigger: ACATTCTCCGAGACAGGTTCAAGAGCTTCCAGAAGA...CTGTGGATCATGAGTTTCTTCTTCAGTTCCTTCAGATCTTTGCTCAATTTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| 3UTR CAA 72 bp | ATGTTTGTATGCACACAAAGAGGCCATAAGAAACCATaGGATCCCCAAAACCTAACTGTATATGAGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: MFVCTQRGHKKP*DPQNLTVYEAV Trigger: CACAGCCTCATATACAGTTAGGTTTTGGGGATCCAATGGTTTCTTATGGCCTCTTTGTGTGCATACAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS GCA 90 bp | GTCAGCCTCTGCCAGTCGCCGTATGCGCCGCTGCTCCCTCCGGCGTaGCAGTTCTGCCAGCCTTCGGGCCACCTGGGCCTTGATCCCACG | + |
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Preference number: 5 (lower is better) Translates to: VSLCQSPYAPLLPPA*QFCQPSGHLGLDPT Trigger: CGTGGGATCAAGGCCCAGGTGGCCCGAAGGCTGGCAGAACTGGCACGCCGGAGGGAGCAGCGGCGCATACGGCGACTGGCAGAGGCTGAC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS GCA 90 bp | ACGCAGCCTGAAAAGTTCTTGGTGCTGAAGCCGGGCTGCCCTCAGTaGAGCCTGCTGCACCCGCAGCTTGCGAGCAGCTTTCTCCCGCCG | + |
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Preference number: 5 (lower is better) Translates to: TQPEKFLVLKPGCPQ*SLLHPQLASSFLPP Trigger: CGGCGGGAGAAAGCTGCTCGCAAGCTGCGGGTGCAGCAGGCTGCACTGAGGGCAGCCCGGCTTCAGCACCAAGAACTTTTCAGGCTGCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS CCA 90 bp | CCATCCTCTTCTCAGGACCAGCAGCACCAGTGGGTGAGATCTCGGTaGTCCCATCACCAGCCTCTGGCTGCCCGGCACGGCCTGCCTCAT | + |
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Preference number: 5 (lower is better) Translates to: PSSSQDQQHQWVRSR*SHHQPLAARHGLPH Trigger: ATGAGGCAGGCCGTGCCGGGCAGCCAGAGGCTGGTGATGGGACCACCGAGATCTCACCCACTGGTGCTGCTGGTCCTGAGAAGAGGATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS TCA 90 bp | CGTCTTCTTCTCCATCCTCTTCTCAGGACCAGCAGCACCAGTGGGTaGGATCTCGGTGGTCCCATCACCAGCCTCTGGCTGCCCGGCACG | + |
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Preference number: 5 (lower is better) Translates to: RLLLHPLLRTSSTSG*DLGGPITSLWLPGT Trigger: CGTGCCGGGCAGCCAGAGGCTGGTGATGGGACCACCGAGATCTCACCCACTGGTGCTGCTGGTCCTGAGAAGAGGATGGAGAAGAAGACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS CCA 90 bp | GCTCCGTCTTCTTCTCCATCCTCTTCTCAGGACCAGCAGCACCAGTaGGTGAGATCTCGGTGGTCCCATCACCAGCCTCTGGCTGCCCGG | + |
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Preference number: 5 (lower is better) Translates to: APSSSPSSSQDQQHQ*VRSRWSHHQPLAAR Trigger: CCGGGCAGCCAGAGGCTGGTGATGGGACCACCGAGATCTCACCCACTGGTGCTGCTGGTCCTGAGAAGAGGATGGAGAAGAAGACGGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS GCA 90 bp | CTTGATCCCACGCAGCCTGAAAAGTTCTTGGTGCTGAAGCCGGGCTaGCCTCAGTGCAGCCTGCTGCACCCGCAGCTTGCGAGCAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: LDPTQPEKFLVLKPG*PQCSLLHPQLASSF Trigger: AAAGCTGCTCGCAAGCTGCGGGTGCAGCAGGCTGCACTGAGGGCAGCCCGGCTTCAGCACCAAGAACTTTTCAGGCTGCGTGGGATCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS CCA 90 bp | CCTGCAGGAATCACCTCCACTGCAGGCACCTGGGAAGGCTTGATGTaGAGGCGTTGTGGCCGCCTCACGCCTTTCTTCTTGGTCTGTTCC | + |
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Preference number: 5 (lower is better) Translates to: PAGITSTAGTWEGLM*RRCGRLTPFFLVCS Trigger: GGAACAGACCAAGAAGAAAGGCGTGAGGCGGCCACAACGCCTCCACATCAAGCCTTCCCAGGTGCCTGCAGTGGAGGTGATTCCTGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS GCA 90 bp | TTCAAAGGTTGGGTTGTAGGAGGCTCCTGCAGGAATCACCTCCACTaGAGGCACCTGGGAAGGCTTGATGTGGAGGCGTTGTGGCCGCCT | + |
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Preference number: 5 (lower is better) Translates to: FKGWVVGGSCRNHLH*RHLGRLDVEALWPP Trigger: AGGCGGCCACAACGCCTCCACATCAAGCCTTCCCAGGTGCCTGCAGTGGAGGTGATTCCTGCAGGAGCCTCCTACAACCCAACCTTTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS CCA 90 bp | CACCTCATGGGCCTCTCGAAGCAGGGCCTGGTGATCTTCAAAGGTTaGGTTGTAGGAGGCTCCTGCAGGAATCACCTCCACTGCAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: HLMGLSKQGLVIFKG*VVGGSCRNHLHCRH Trigger: GTGCCTGCAGTGGAGGTGATTCCTGCAGGAGCCTCCTACAACCCAACCTTTGAAGATCACCAGGCCCTGCTTCGAGAGGCCCATGAGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR CAA 90 bp | CACATATTCAGCACTGAAGGCAGACTGTGGTGGAGAGGAGCTGTGCTAAGACCTTGCTGCACCCGCAGCTaGCGAGCAGCTTTCTCCCGC | + |
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Preference number: 5 (lower is better) Translates to: HIFSTEGRLWWRGAVLRPCCTRS*RAAFSR Trigger: GCGGGAGAAAGCTGCTCGCAAGCTGCGGGTGCAGCA...AGGTCTTAGCACAGCTCCTCTCCACCACAGTCTGCCTTCAGTGCTGAATATGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS GCA 90 bp | AAGCAGGGCCTGGTGATCTTCAAAGGTTGGGTTGTAGGAGGCTCCTaGAGGAATCACCTCCACTGCAGGCACCTGGGAAGGCTTGATGTG | + |
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Preference number: 5 (lower is better) Translates to: KQGLVIFKGWVVGGS*RNHLHCRHLGRLDV Trigger: CACATCAAGCCTTCCCAGGTGCCTGCAGTGGAGGTGATTCCTGCAGGAGCCTCCTACAACCCAACCTTTGAAGATCACCAGGCCCTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS GCA 90 bp | TCTGGCTTCAGTGTCCTGAGTGAGCCAGACAACTCAGAGCTGAGCTaGACATCAATGTCAGGAGCCTGGTACTTGAGCCGTCCCAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: SGFSVLSEPDNSELS*TSMSGAWYLSRPSL Trigger: AAGGCTGGGACGGCTCAAGTACCAGGCTCCTGACATTGATGTGCAGCTCAGCTCTGAGTTGTCTGGCTCACTCAGGACACTGAAGCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR CAA 90 bp | CACATATTCAGCACTGAAGGCAGACTGTGGTGGAGAGGAGCTGTGCTAAGACCTCTTGATGTGGAGGCGTaGTGGCCGCCTCACGCCTTT | + |
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Preference number: 5 (lower is better) Translates to: HIFSTEGRLWWRGAVLRPLDVEA*WPPHAF Trigger: AAAGGCGTGAGGCGGCCACAACGCCTCCACATCAAG...AGGTCTTAGCACAGCTCCTCTCCACCACAGTCTGCCTTCAGTGCTGAATATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR CAA 90 bp | CACATATTCAGCACTGAAGGCAGACTGTGGTGGAGAGGAGCTGTGCTAAGACCTCAGCCTGAAAAGTTCTaGGTGCTGAAGCCGGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: HIFSTEGRLWWRGAVLRPQPEKF*VLKPGC Trigger: GCAGCCCGGCTTCAGCACCAAGAACTTTTCAGGCTG...AGGTCTTAGCACAGCTCCTCTCCACCACAGTCTGCCTTCAGTGCTGAATATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR CAA 90 bp | ACGTCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTTAGATATAATAAGCCCAGCCTTCGGGGCTaGTCAGCCTCTGCCAGTCGC | + |
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Preference number: 5 (lower is better) Translates to: TSSSGVSEDSYSVLRYNKPSLRG*SASASR Trigger: GCGACTGGCAGAGGCTGACAAGCCCCGAAGGCTGGG...CTTATTATATCTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR CAA 90 bp | CACATATTCAGCACTGAAGGCAGACTGTGGTGGAGAGGAGCTGTGCTAAGACCTTGTGCGAGGATGTCTTaGGGAGCAGGGATCTTAGAA | + |
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Preference number: 5 (lower is better) Translates to: HIFSTEGRLWWRGAVLRPCARMS*GAGILE Trigger: TTCTAAGATCCCTGCTCCCAAAGACATCCTCGCACA...AGGTCTTAGCACAGCTCCTCTCCACCACAGTCTGCCTTCAGTGCTGAATATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR CAA 90 bp | AAAAATAACGGAAGTTCTAAGATAAATAGAATGCCAAGAGTGACAGATGCAACCAGTCGGGCCTGTGCCTaGCGCACATCCCTGGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: KNNGSSKINRMPRVTDATSRACA*RTSLGS Trigger: ACTGCCCAGGGATGTGCGCAAGGCACAGGCCCGACT...GGTTGCATCTGTCACTCTTGGCATTCTATTTATCTTAGAACTTCCGTTATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR CAA 90 bp | AAAAATAACGGAAGTTCTAAGATAAATAGAATGCCAAGAGTGACAGATGCAACCTCAGGAGCCTGGTACTaGAGCCGTCCCAGCCTTCGG | + |
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Preference number: 5 (lower is better) Translates to: KNNGSSKINRMPRVTDATSGAWY*SRPSLR Trigger: CCGAAGGCTGGGACGGCTCAAGTACCAGGCTCCTGA...GGTTGCATCTGTCACTCTTGGCATTCTATTTATCTTAGAACTTCCGTTATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR CAA 90 bp | AAAAATAACGGAAGTTCTAAGATAAATAGAATGCCAAGAGTGACAGATGCAACCGGCGTGTCCAGAGGGTaGTCTGGGTTCCAGAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: KNNGSSKINRMPRVTDATGVSRG*SGFQRS Trigger: TGACCTCTGGAACCCAGACAACCCTCTGGACACGCC...GGTTGCATCTGTCACTCTTGGCATTCTATTTATCTTAGAACTTCCGTTATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR CAA 90 bp | ACGTCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTTAGATATAATAAGCTTGGTTCTTTTCTCTaGAATCCTGTGTCCACGAAG | + |
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Preference number: 5 (lower is better) Translates to: TSSSGVSEDSYSVLRYNKLGSFL*NPVSTK Trigger: CTTCGTGGACACAGGATTCAAGAGAAAAGAACCAAG...CTTATTATATCTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR CAA 90 bp | AAAAATAACGGAAGTTCTAAGATAAATAGAATGCCAAGAGTGACAGATGCAACCGGTGATCTTCAAAGGTaGGGTTGTAGGAGGCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: KNNGSSKINRMPRVTDATGDLQR*GCRRLL Trigger: CAGGAGCCTCCTACAACCCAACCTTTGAAGATCACC...GGTTGCATCTGTCACTCTTGGCATTCTATTTATCTTAGAACTTCCGTTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR CAA 90 bp | CTGAAAATTGAGCAAAGATCTGAAGGAACTGAAGAAGAAACTCATGATCCACAGAGCTTCACTTTGTATTaGCGCTTGAACTTGGCTCGT | + |
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Preference number: 5 (lower is better) Translates to: LKIEQRSEGTEEETHDPQSFTLY*RLNLAR Trigger: ACGAGCCAAGTTCAAGCGCAAATACAAAGTGAAGCT...CTGTGGATCATGAGTTTCTTCTTCAGTTCCTTCAGATCTTTGCTCAATTTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS-3UTR CAA 90 bp | AAAAATAACGGAAGTTCTAAGATAAATAGAATGCCAAGAGTGACAGATGCAACCTCCACCAGCTTCACTTaGTATTTGCGCTTGAACTTG | + |
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Preference number: 5 (lower is better) Translates to: KNNGSSKINRMPRVTDATSTSFT*YLRLNL Trigger: CAAGTTCAAGCGCAAATACAAAGTGAAGCTGGTGGA...GGTTGCATCTGTCACTCTTGGCATTCTATTTATCTTAGAACTTCCGTTATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS CCA 72 bp | TCTCAGGACCAGCAGCACCAGTGGGTGAGATCTCGGTaGTCCCATCACCAGCCTCTGGCTGCCCGGCACGGC | + |
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Preference number: 6 (lower is better) Translates to: SQDQQHQWVRSR*SHHQPLAARHG Trigger: GCCGTGCCGGGCAGCCAGAGGCTGGTGATGGGACCACCGAGATCTCACCCACTGGTGCTGCTGGTCCTGAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS GCA 72 bp | ACGCAGCCTGAAAAGTTCTTGGTGCTGAAGCCGGGCTaGCCTCAGTGCAGCCTGCTGCACCCGCAGCTTGCG | + |
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Preference number: 6 (lower is better) Translates to: TQPEKFLVLKPG*PQCSLLHPQLA Trigger: CGCAAGCTGCGGGTGCAGCAGGCTGCACTGAGGGCAGCCCGGCTTCAGCACCAAGAACTTTTCAGGCTGCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS CCA 72 bp | GAGGCTCCTGCAGGAATCACCTCCACTGCAGGCACCTaGGAAGGCTTGATGTGGAGGCGTTGTGGCCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: EAPAGITSTAGT*EGLMWRRCGRL Trigger: GAGGCGGCCACAACGCCTCCACATCAAGCCTTCCCAGGTGCCTGCAGTGGAGGTGATTCCTGCAGGAGCCTC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS CAA 72 bp | GCAGGAATCACCTCCACTGCAGGCACCTGGGAAGGCTaGATGTGGAGGCGTTGTGGCCGCCTCACGCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: AGITSTAGTWEG*MWRRCGRLTPF Trigger: GAAAGGCGTGAGGCGGCCACAACGCCTCCACATCAAGCCTTCCCAGGTGCCTGCAGTGGAGGTGATTCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS TCA 72 bp | CTCCATCCTCTTCTCAGGACCAGCAGCACCAGTGGGTaGGATCTCGGTGGTCCCATCACCAGCCTCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LHPLLRTSSTSG*DLGGPITSLWL Trigger: CAGCCAGAGGCTGGTGATGGGACCACCGAGATCTCACCCACTGGTGCTGCTGGTCCTGAGAAGAGGATGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS GCA 72 bp | GAAAAGTTCTTGGTGCTGAAGCCGGGCTGCCCTCAGTaGAGCCTGCTGCACCCGCAGCTTGCGAGCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: EKFLVLKPGCPQ*SLLHPQLASSF Trigger: AAAGCTGCTCGCAAGCTGCGGGTGCAGCAGGCTGCACTGAGGGCAGCCCGGCTTCAGCACCAAGAACTTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS GCA 72 bp | GCCTGTGCCTTGCGCACATCCCTGGGCAGTTCGCCCTaGTTTGCCAGTTTCTCCCATAACTCCTCCTTTCGC | + |
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Preference number: 6 (lower is better) Translates to: ACALRTSLGSSP*FASFSHNSSFR Trigger: GCGAAAGGAGGAGTTATGGGAGAAACTGGCAAAGCAGGGCGAACTGCCCAGGGATGTGCGCAAGGCACAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS GCA 72 bp | TGGGTTGTAGGAGGCTCCTGCAGGAATCACCTCCACTaGAGGCACCTGGGAAGGCTTGATGTGGAGGCGTTG | + |
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Preference number: 6 (lower is better) Translates to: WVVGGSCRNHLH*RHLGRLDVEAL Trigger: CAACGCCTCCACATCAAGCCTTCCCAGGTGCCTGCAGTGGAGGTGATTCCTGCAGGAGCCTCCTACAACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS CCA 72 bp | ATCACCTCCACTGCAGGCACCTGGGAAGGCTTGATGTaGAGGCGTTGTGGCCGCCTCACGCCTTTCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: ITSTAGTWEGLM*RRCGRLTPFFL Trigger: CAAGAAGAAAGGCGTGAGGCGGCCACAACGCCTCCACATCAAGCCTTCCCAGGTGCCTGCAGTGGAGGTGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS CAA 72 bp | GGGCCTCTCGAAGCAGGGCCTGGTGATCTTCAAAGGTaGGGTTGTAGGAGGCTCCTGCAGGAATCACCTCCA | + |
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Preference number: 6 (lower is better) Translates to: GPLEAGPGDLQR*GCRRLLQESPP Trigger: TGGAGGTGATTCCTGCAGGAGCCTCCTACAACCCAACCTTTGAAGATCACCAGGCCCTGCTTCGAGAGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS CCA 72 bp | ATCCTGACCAATCAAAGGCGTGTCCAGAGGGTTGTCTaGGTTCCAGAGGTCATAGAAGGGTCGCTCAATGAT | + |
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Preference number: 6 (lower is better) Translates to: ILTNQRRVQRVV*VPEVIEGSLND Trigger: ATCATTGAGCGACCCTTCTATGACCTCTGGAACCCAGACAACCCTCTGGACACGCCTTTGATTGGTCAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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| CDS CAA 72 bp | TTCTCCACCAGCTTCACTTTGTATTTGCGCTTGAACTaGGCTCGTTCTCGGGGCTCAATCATATTTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: FSTSFTLYLRLN*ARSRGSIIFLF Trigger: GAAGAGAAATATGATTGAGCCCCGAGAACGAGCCAAGTTCAAGCGCAAATACAAAGTGAAGCTGGTGGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044158.13 |
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