Pregenerated sensors for NOP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038279Ensembl transcript IDs: ENSMUST00000044200.11, ENSMUST00000204185.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | ATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCAACCGACGTCAACAGACCCTaGCCTCCTCTTGGCTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: ICMHRGRPALHQDLKVPTDVNRP*PPLGCP Trigger: CGGGCAGCCAAGAGGAGGGCAGGGTCTGTTGACGTC...GGTTGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR CCA 90 bp | TTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCCGAAGTCCAGGCCGGTaGGCACCAGCCGCACATTCC | + |
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Preference number: 4 (lower is better) Translates to: FHMYAQGEASLASGSKSSRSPGR*APAAHS Trigger: GGAATGTGCGGCTGGTGCCCACCGGCCTGGACTTCG...GGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR CCA 90 bp | AATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTGGAGCCTGGCCATCCTaGTCCGTCTCCCCAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: NFICMHRGRPALHQDLKVGAWPS*SVSPAG Trigger: CCCTGCTGGGGAGACGGACCAGGATGGCCAGGCTCC...AACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR TCA 90 bp | ATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCAACCTCCTGGATCCGCTTGTaGACTCGCTGCAGGTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: ICMHRGRPALHQDLKVPTSWIRL*TRCRSG Trigger: TCCAGACCTGCAGCGAGTTCACAAGCGGATCCAGGA...GGTTGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR TCA 90 bp | TTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCACGATTGATCAGAGCCTaGGCAAGGTCTCGGCGACGG | + |
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Preference number: 4 (lower is better) Translates to: FICMHRGRPALHQDLKVPRLIRA*ARSRRR Trigger: CCGTCGCCGAGACCTTGCTCAGGCTCTGATCAATCG...TGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR TCA 90 bp | TTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCAAGCAGCAGTTCCTTCTaGAGGTGGGCACAGCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: FICMHRGRPALHQDLKVPSSSSF*RWAQRW Trigger: CCAGCGCTGTGCCCACCTTCAGAAGGAACTGCTGCT...TGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR GCA 90 bp | TTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCCTCATGCTCCTGAGGTaGCAGGGCCATGACGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: FHMYAQGEASLASGSKSSLMLLR*QGHDGQ Trigger: TTGCCCGTCATGGCCCTGGCACCTCAGGAGCATGAG...GGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR CCA 90 bp | TTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCAACTCGCTGCAGGTCTaGAGCCTGGCCATCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FHMYAQGEASLASGSKSSNSLQV*SLAILV Trigger: GACCAGGATGGCCAGGCTCCAGACCTGCAGCGAGTT...GGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR CCA 90 bp | TTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCGGTAGAAGCGCCGGGTaGAACGCAGAGTGGGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: FHMYAQGEASLASGSKSSGRSAG*NAEWGE Trigger: TTCACCCCACTCTGCGTTCCACCCGGCGCTTCTACC...GGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR CCA 90 bp | ATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCAACCCCTCCTTTTTGCTGGTaGGGGCCTGGTGGAACTGTG | + |
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Preference number: 4 (lower is better) Translates to: ICMHRGRPALHQDLKVPTPPFCW*GPGGTV Trigger: CACAGTTCCACCAGGCCCCCACCAGCAAAAAGGAGG...GGTTGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR TCA 90 bp | AATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTATCCGCTCATGCTCCTaGGGTGCCAGGGCCATGACG | + |
|
Preference number: 4 (lower is better) Translates to: NFICMHRGRPALHQDLKVIRSCS*GARAMT Trigger: CGTCATGGCCCTGGCACCTCAGGAGCATGAGCGGAT...AACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR GCA 90 bp | ATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCAACCTGCTGCCGAGTTTCCTaGATGGGGCTGGGGAATAGA | + |
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Preference number: 4 (lower is better) Translates to: ICMHRGRPALHQDLKVPTCCRVS*MGLGNR Trigger: TCTATTCCCCAGCCCCATGCAGGAAACTCGGCAGCA...GGTTGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR GCA 90 bp | ATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCAACCGGCTGTCTCAGCAACTaGTGCTTTGCCTTCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: ICMHRGRPALHQDLKVPTGCLSN*CFAFTA Trigger: GGCTGTGAAGGCAAAGCAGCAGTTGCTGAGACAGCC...GGTTGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR CCA 90 bp | TTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCAGGTAGCCTCCGGTCTTaGAGGCAGCGTTCACTGAGT | + |
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Preference number: 4 (lower is better) Translates to: FICMHRGRPALHQDLKVPGSLRS*RQRSLS Trigger: ACTCAGTGAACGCTGCCTCCAAGACCGGAGGCTACC...TGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR GCA 90 bp | TTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCAGGGGTGAAAGCGCCTTaGTTGGAAGCGGGTAAAACC | + |
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Preference number: 4 (lower is better) Translates to: FICMHRGRPALHQDLKVPGVKAP*LEAGKT Trigger: GGTTTTACCCGCTTCCAAGCAAGGCGCTTTCACCCC...TGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR GCA 90 bp | AATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCAGCAACTGCTGCTTTaGCTTCACAGCCCCACGGGC | + |
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Preference number: 4 (lower is better) Translates to: NFICMHRGRPALHQDLKVQQLLL*LHSPTG Trigger: GCCCGTGGGGCTGTGAAGGCAAAGCAGCAGTTGCTG...AACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR CCA 90 bp | ATATGTATATTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGACCCTGCCCTCCTCTTaGCTGCCCGCTTTCGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: ICILNFICMHRGRPALHQTLPSS*LPAFGH Trigger: GTGCCCGAAAGCGGGCAGCCAAGAGGAGGGCAGGGT...CTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAATATACATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR CCA 90 bp | TTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCTCATCCTTTCTGGGGTaGGACTCAGGGGACACACCA | + |
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Preference number: 4 (lower is better) Translates to: FHMYAQGEASLASGSKSSSSFLG*DSGDTP Trigger: TGGTGTGTCCCCTGAGTCCCACCCCAGAAAGGATGA...GGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR CCA 90 bp | TTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCACACGGGCTTTCTTGGTaGGCTGACTACCGTTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: FICMHRGRPALHQDLKVPHGLSW*ADYRSQ Trigger: CTGAGAACGGTAGTCAGCCCACCAAGAAAGCCCGTG...TGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR CCA 90 bp | TTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCTTCAGTGGACAAGCCTaGCCCTTTGGCGATGCCGTT | + |
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Preference number: 4 (lower is better) Translates to: FHMYAQGEASLASGSKSSFSGQA*PFGDAV Trigger: AACGGCATCGCCAAAGGGCCAGGCTTGTCCACTGAA...GGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR CCA 90 bp | AATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTGGCCTGGTGGAACTGTaGGGAGACACAAAGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NFICMHRGRPALHQDLKVGLVEL*GDTKGA Trigger: AGCCCCCTTTGTGTCTCCCCACAGTTCCACCAGGCC...AACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR TCA 90 bp | TTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCTCCCCATCACTGTTTTaGATTGGTGCTGGGCGCTTC | + |
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Preference number: 4 (lower is better) Translates to: FHMYAQGEASLASGSKSSSPSLF*IGAGRF Trigger: GAAGCGCCCAGCACCAATTCAAAACAGTGATGGGGA...GGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR GCA 90 bp | TTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCGCATCCTGGGCTTTCTaGTTCAGGGCAGCTCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: FHMYAQGEASLASGSKSSASWAF*FRAALS Trigger: TGAAAGAGCTGCCCTGAAGCAGAAAGCCCAGGATGC...GGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR CCA 90 bp | ATATGTATATTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGTGCAGGTCTGGAGCCTaGCCATCCTGGTCCGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: ICILNFICMHRGRPALHQCRSGA*PSWSVS Trigger: GGAGACGGACCAGGATGGCCAGGCTCCAGACCTGCA...CTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAATATACATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR CCA 90 bp | ATATTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAGGTCCGAAGGGTGATTaGCCGGGGCACCTCATTAGC | + |
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Preference number: 4 (lower is better) Translates to: ILNFICMHRGRPALHQDLGPKGD*PGHLIS Trigger: GCTAATGAGGTGCCCCGGCCAATCACCCTTCGGACC...TAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR CCA 90 bp | AATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTGGCTTCCCCAAGGGATaGAGCACAGTCCTTAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: NFICMHRGRPALHQDLKVGFPKG*STVLRP Trigger: AGGCCTAAGGACTGTGCTCCATCCCTTGGGGAAGCC...AACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR CCA 90 bp | ATATTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTACTGGTGGGGGCCTGGTaGAACTGTGGGGAGACACAA | + |
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Preference number: 4 (lower is better) Translates to: ILNFICMHRGRPALHQDLLVGAW*NCGETQ Trigger: TTGTGTCTCCCCACAGTTCCACCAGGCCCCCACCAG...TAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR GCA 90 bp | TTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCCTGCAAATCCCCCTCTaGTTTGTCATCCTTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: FHMYAQGEASLASGSKSSLQIPL*FVILSG Trigger: CCCAGAAAGGATGACAAAGCAGAGGGGGATTTGCAG...GGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR GCA 90 bp | TTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCGCTCCATTAGCAGGCTaGTGTGCTAACTGCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: FHMYAQGEASLASGSKSSAPLAG*CANCCF Trigger: AAAGCAGCAGTTAGCACAGCAGCCTGCTAATGGAGC...GGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR CCA 90 bp | ATATGTATATTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGCCCCAAAGGTCCCCCTaGGTCACCACATCGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: ICILNFICMHRGRPALHQPQRSP*VTTSSS Trigger: GGAAGACGATGTGGTGACCCAGGGGGACCTTTGGGG...CTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAATATACATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR CCA 90 bp | TTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAACCAGCTGTGGCATCCTaGGCTTTCTGCTTCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LNFICMHRGRPALHQDLKPAVAS*AFCFRA Trigger: TGCCCTGAAGCAGAAAGCCCAGGATGCCACAGCTGG...TTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR CCA 90 bp | ATATGTATATTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGAGCCCCCTACCACCTTaGGGAACTGGCGCCCATCAT | + |
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Preference number: 4 (lower is better) Translates to: ICILNFICMHRGRPALHQSPLPP*GTGAHH Trigger: ATGATGGGCGCCAGTTCCCCAAGGTGGTAGGGGGCT...CTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAATATACATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR CCA 90 bp | ATATGTATATTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGCGGGTAAAACCTTCCTaGCCGAAGTCCAGGCCGGTG | + |
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Preference number: 4 (lower is better) Translates to: ICILNFICMHRGRPALHQRVKPS*PKSRPV Trigger: CACCGGCCTGGACTTCGGCCAGGAAGGTTTTACCCG...CTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAATATACATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR TCA 90 bp | ATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCAACCGTTGCCCTTTGTCATTaGTTTCCTCCTTTTTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ICMHRGRPALHQDLKVPTVALCH*FPPFCW Trigger: CCAGCAAAAAGGAGGAAATCAATGACAAAGGGCAAC...GGTTGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR GCA 90 bp | ATATTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAGCTCTTGAGCCGGTCTaGATTGGCATCGTTGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: ILNFICMHRGRPALHQDLALEPV*IGIVGK Trigger: CTTGCCAACGATGCCAATGCAGACCGGCTCAAGAGC...TAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR GCA 90 bp | TTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAACTCTGTAGGGGTAGCTaGTGCCGAGTTTCCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: LNFICMHRGRPALHQDLKLCRGS*CRVSCM Trigger: CATGCAGGAAACTCGGCAGCAGCTACCCCTACAGAG...TTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR CCA 90 bp | ATATGTATATTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGACAGGACCCCAGCTGTaGCATCCTGGGCTTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: ICILNFICMHRGRPALHQTGPQL*HPGLSA Trigger: AGCAGAAAGCCCAGGATGCCACAGCTGGGGTCCTGT...CTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAATATACATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR CCA 90 bp | ATATGTATATTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGCCCCACGGGCTTTCTTaGTGGGCTGACTACCGTTCT | + |
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Preference number: 4 (lower is better) Translates to: ICILNFICMHRGRPALHQPHGLS*WADYRS Trigger: AGAACGGTAGTCAGCCCACCAAGAAAGCCCGTGGGG...CTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAATATACATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR TCA 90 bp | TTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCCTCCAGGCAATGTTTTaGTCCCAGGAGACTTATTTG | + |
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Preference number: 4 (lower is better) Translates to: FHMYAQGEASLASGSKSSLQAMF*SQETYL Trigger: CAAATAAGTCTCCTGGGATCAAAACATTGCCTGGAG...GGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR TCA 90 bp | ATATTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTACACAAGTCCAGACTTTaGCCACTTCCCCAGTGGATC | + |
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Preference number: 4 (lower is better) Translates to: ILNFICMHRGRPALHQDLHKSRL*PLPQWI Trigger: GATCCACTGGGGAAGTGGTCAAAGTCTGGACTTGTG...TAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR TCA 90 bp | AATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTGCTTTCTTGGTGGGCTaGCTACCGTTCTCAGACTTT | + |
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Preference number: 4 (lower is better) Translates to: NFICMHRGRPALHQDLKVAFLVG*LPFSDF Trigger: AAAGTCTGAGAACGGTAGTCAGCCCACCAAGAAAGC...AACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR GCA 90 bp | TTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCAATTCTCATCGCCAGCTaGAGGCAAAAATCTGACCAA | + |
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Preference number: 4 (lower is better) Translates to: FICMHRGRPALHQDLKVPILIAS*RQKSDQ Trigger: TTGGTCAGATTTTTGCCTGCAGCTGGCGATGAGAAT...TGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR GCA 90 bp | ATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCAACCTCTTCCACATTAATCTaGAAATCCCCCTCTGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: ICMHRGRPALHQDLKVPTSSTLI*KSPSAL Trigger: CAAAGCAGAGGGGGATTTGCAGATTAATGTGGAAGA...GGTTGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR GCA 90 bp | ATATGTATATTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGCTGGCCCTTTGGCGATaGCGTTCAACTTCTGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: ICILNFICMHRGRPALHQLALWR*RSTSGR Trigger: CCTTCCAGAAGTTGAACGGCATCGCCAAAGGGCCAG...CTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAATATACATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR CCA 90 bp | AATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCTGCATTGGCATCGTTaGCAAGGATCACTCCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: NFICMHRGRPALHQDLKVLHWHR*QGSLLC Trigger: ACACAGGAGTGATCCTTGCCAACGATGCCAATGCAG...AACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR CCA 90 bp | AATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTTCTGGAAGGGCTTCTTaGAATGTGGCTGTCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: NFICMHRGRPALHQDLKVSGRAS*NVAVSA Trigger: TGCTGAGACAGCCACATTCCAAGAAGCCCTTCCAGA...AACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS-3UTR GCA 90 bp | ATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCAACCTGCTGTGCTAACTGCTaGTTTCCTTTCTGTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ICMHRGRPALHQDLKVPTCCANC*FPFCFF Trigger: AAAGAAACAGAAAGGAAAGCAGCAGTTAGCACAGCA...GGTTGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CCA 90 bp | ATATGTATATTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGACTCGACAGCCTCTTaGAATTCTCATCGCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ICILNFICMHRGRPALHQDSTAS*NSHRQL Trigger: CAGCTGGCGATGAGAATTCCAAGAGGCTGTCGAGTC...CTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAATATACATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CCA 90 bp | ATATGTATATTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGCTTTGTCATCCTTTCTaGGGTGGGACTCAGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: ICILNFICMHRGRPALHQLCHPF*GGTQGT Trigger: TGTCCCCTGAGTCCCACCCCAGAAAGGATGACAAAG...CTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAATATACATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CCA 90 bp | ATATGTATATTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGACAGTCCTTAGGCCTTaGGGCAGCACGGATTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ICILNFICMHRGRPALHQTVLRP*GSTDFR Trigger: TCTGAAATCCGTGCTGCCCCAAGGCCTAAGGACTGT...CTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAATATACATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CCA 90 bp | AATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTATCACTGTTTTGAATTaGTGCTGGGCGCTTCTTACC | + |
|
Preference number: 4 (lower is better) Translates to: NFICMHRGRPALHQDLKVITVLN*CWALLT Trigger: GGTAAGAAGCGCCCAGCACCAATTCAAAACAGTGAT...AACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| 3UTR CAA 72 bp | TTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTaGCATCAGGATCTAAAAGTTCCAACCCAGAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: LNFICMHRGRPA*HQDLKVPTQRQ Trigger: TTGTCTCTGGGTTGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR GCA 90 bp | ATATGTATATTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGGCTGCTGTGCTAACTaGTGCTTTCCTTTCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ICILNFICMHRGRPALHQGCCAN*CFPFCF Trigger: GAAACAGAAAGGAAAGCAGCAGTTAGCACAGCAGCC...CTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAATATACATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CCA 90 bp | TTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAACTTTCTGTTTCTTTTTaGCTTCCCCAAGGGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LNFICMHRGRPALHQDLKLSVSF*LPQGME Trigger: CTCCATCCCTTGGGGAAGCCAAAAAGAAACAGAAAG...TTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CCA 90 bp | ATATGTATATTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGTTTCCTGCATGGGGCTaGGGAATAGAATTGGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ICILNFICMHRGRPALHQFPAWG*GIELEN Trigger: ATTTTCCAATTCTATTCCCCAGCCCCATGCAGGAAA...CTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAATATACATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS GCA 90 bp | AGGGTAGAAGCGCCGGGTGGAACGCAGAGTGGGGTGAAAGCGCCTTaGTTGGAAGCGGGTAAAACCTTCCTGGCCGAAGTCCAGGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: RVEAPGGTQSGVKAP*LEAGKTFLAEVQAG Trigger: ACCGGCCTGGACTTCGGCCAGGAAGGTTTTACCCGCTTCCAAGCAAGGCGCTTTCACCCCACTCTGCGTTCCACCCGGCGCTTCTACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS CCA 90 bp | AGCCCCACGGGCTTTCTTGGTGGGCTGACTACCGTTCTCAGACTTTaGGGTGACCTGATCCTTCAGGTCAGGCTCTGTAGGGGTAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SPTGFLGGLTTVLRL*GDLILQVRLCRGSC Trigger: GCAGCTACCCCTACAGAGCCTGACCTGAAGGATCAGGTCACCCCAAAGTCTGAGAACGGTAGTCAGCCCACCAAGAAAGCCCGTGGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS TCA 90 bp | GGTGCAGTAGACCAGGTAGCCTCCGGTCTTGGAGGCAGCGTTCACTaGGTCGATAGCACTGAGCAGCAGTTCCTTCTGAAGGTGGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: GAVDQVASGLGGSVH*VDSTEQQFLLKVGT Trigger: TGTGCCCACCTTCAGAAGGAACTGCTGCTCAGTGCTATCGACTCAGTGAACGCTGCCTCCAAGACCGGAGGCTACCTGGTCTACTGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS GCA 90 bp | TTTGATCCCAGGAGACTTATTTGGCTTAGGGACGTCAACAGACCCTaGCCTCCTCTTGGCTGCCCGCTTTCGGGCACGACTCGACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: FDPRRLIWLRDVNRP*PPLGCPLSGTTRQP Trigger: AGGCTGTCGAGTCGTGCCCGAAAGCGGGCAGCCAAGAGGAGGGCAGGGTCTGTTGACGTCCCTAAGCCAAATAAGTCTCCTGGGATCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044200.11 ENSMUST00000204185.2 |
||
| CDS GCA 90 bp | GACTCCCAAGCGGTGCAGGTTGCCCACCACGCTCTTGAGCCGGTCTaGATTGGCATCGTTGGCAAGGATCACTCCTGTGTTCTTCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: DSQAVQVAHHALEPV*IGIVGKDHSCVLHQ Trigger: CTGATGAAGAACACAGGAGTGATCCTTGCCAACGATGCCAATGCAGACCGGCTCAAGAGCGTGGTGGGCAACCTGCACCGCTTGGGAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS CCA 90 bp | CCCTTTGGCGATGCCGTTCAACTTCTGGAAGGGCTTCTTGGAATGTaGCTGTCTCAGCAACTGCTGCTTTGCCTTCACAGCCCCACGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PFGDAVQLLEGLLGM*LSQQLLLCLHSPTG Trigger: GCCCGTGGGGCTGTGAAGGCAAAGCAGCAGTTGCTGAGACAGCCACATTCCAAGAAGCCCTTCCAGAAGTTGAACGGCATCGCCAAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS GCA 90 bp | CTGGAAGGGCTTCTTGGAATGTGGCTGTCTCAGCAACTGCTGCTTTaGCTTCACAGCCCCACGGGCTTTCTTGGTGGGCTGACTACCGTT | + |
|
Preference number: 5 (lower is better) Translates to: LEGLLGMWLSQQLLL*LHSPTGFLGGLTTV Trigger: AACGGTAGTCAGCCCACCAAGAAAGCCCGTGGGGCTGTGAAGGCAAAGCAGCAGTTGCTGAGACAGCCACATTCCAAGAAGCCCTTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS CCA 90 bp | AGCCTGGCCCTTTGGCGATGCCGTTCAACTTCTGGAAGGGCTTCTTaGAATGTGGCTGTCTCAGCAACTGCTGCTTTGCCTTCACAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLALWRCRSTSGRAS*NVAVSATAALPSQP Trigger: GGGCTGTGAAGGCAAAGCAGCAGTTGCTGAGACAGCCACATTCCAAGAAGCCCTTCCAGAAGTTGAACGGCATCGCCAAAGGGCCAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CAA 90 bp | TTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCAGACCCTGCCCTCCTCTaGGCTGCCCGCTTTCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FICMHRGRPALHQDLKVPDPALL*AARFRA Trigger: TGCCCGAAAGCGGGCAGCCAAGAGGAGGGCAGGGTC...TGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS TCA 90 bp | AGCACATGTCTAAGATCCGCTCATGCTCCTGAGGTGCCAGGGCCATaGCGGGCAACATACTGGAAGCTCCCTGCAGCATATAGTGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: STCLRSAHAPEVPGP*RATYWKLPAAYSVQ Trigger: CTGGACACTATATGCTGCAGGGAGCTTCCAGTATGTTGCCCGTCATGGCCCTGGCACCTCAGGAGCATGAGCGGATCTTAGACATGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS CCA 90 bp | CTTGGGCATCTGGGACAGAAGGTTCAGTGGACAAGCCTGGCCCTTTaGCGATGCCGTTCAACTTCTGGAAGGGCTTCTTGGAATGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGHLGQKVQWTSLAL*RCRSTSGRASWNVA Trigger: AGCCACATTCCAAGAAGCCCTTCCAGAAGTTGAACGGCATCGCCAAAGGGCCAGGCTTGTCCACTGAACCTTCTGTCCCAGATGCCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS CCA 90 bp | GGTAGACACTTGGGCATCTGGGACAGAAGGTTCAGTGGACAAGCCTaGCCCTTTGGCGATGCCGTTCAACTTCTGGAAGGGCTTCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GRHLGIWDRRFSGQA*PFGDAVQLLEGLLG Trigger: TCCAAGAAGCCCTTCCAGAAGTTGAACGGCATCGCCAAAGGGCCAGGCTTGTCCACTGAACCTTCTGTCCCAGATGCCCAAGTGTCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS CCA 90 bp | TTTCTTTTTGGCTTCCCCAAGGGATGGAGCACAGTCCTTAGGCCTTaGGGCAGCACGGATTTCAGAGGGAGTCGGCACAGGAGGTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FLFGFPKGWSTVLRP*GSTDFRGSRHRRCS Trigger: AGAACACCTCCTGTGCCGACTCCCTCTGAAATCCGTGCTGCCCCAAGGCCTAAGGACTGTGCTCCATCCCTTGGGGAAGCCAAAAAGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CAA 90 bp | ATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCAACCAAGCCCCCTACCACCTaGGGGAACTGGCGCCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: ICMHRGRPALHQDLKVPTKPPTT*GNWRPS Trigger: TGATGGGCGCCAGTTCCCCAAGGTGGTAGGGGGCTT...GGTTGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS TCA 90 bp | TCGACAGCCTCTTGGAATTCTCATCGCCAGCTGCAGGCAAAAATCTaGCCAATTCGGTCTCCGCACCCTTCTGTTTTCGGGCCTTTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: STASWNSHRQLQAKI*PIRSPHPSVFGPFG Trigger: GCCGAAAGGCCCGAAAACAGAAGGGTGCGGAGACCGAATTGGTCAGATTTTTGCCTGCAGCTGGCGATGAGAATTCCAAGAGGCTGTCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044200.11 ENSMUST00000204185.2 |
||
| CDS GCA 90 bp | CATCTGGGACAGAAGGTTCAGTGGACAAGCCTGGCCCTTTGGCGATaGCGTTCAACTTCTGGAAGGGCTTCTTGGAATGTGGCTGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HLGQKVQWTSLALWR*RSTSGRASWNVAVS Trigger: TGAGACAGCCACATTCCAAGAAGCCCTTCCAGAAGTTGAACGGCATCGCCAAAGGGCCAGGCTTGTCCACTGAACCTTCTGTCCCAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS CCA 90 bp | GGTTCAGTGGACAAGCCTGGCCCTTTGGCGATGCCGTTCAACTTCTaGAAGGGCTTCTTGGAATGTGGCTGTCTCAGCAACTGCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GSVDKPGPLAMPFNF*KGFLECGCLSNCCF Trigger: AAAGCAGCAGTTGCTGAGACAGCCACATTCCAAGAAGCCCTTCCAGAAGTTGAACGGCATCGCCAAAGGGCCAGGCTTGTCCACTGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CAA 90 bp | ATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCAACCTCAGCAACTGCTGCTTaGCCTTCACAGCCCCACGGG | + |
|
Preference number: 5 (lower is better) Translates to: ICMHRGRPALHQDLKVPTSATAA*PSQPHG Trigger: CCCGTGGGGCTGTGAAGGCAAAGCAGCAGTTGCTGA...GGTTGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CAA 90 bp | ATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCAACCTTGAGCCGGTCTGCATaGGCATCGTTGGCAAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: ICMHRGRPALHQDLKVPTLSRSA*ASLARI Trigger: GATCCTTGCCAACGATGCCAATGCAGACCGGCTCAA...GGTTGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CAA 90 bp | ATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCAACCAACAGCTCCATGAGCTaGCTCAGCAGGAAGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ICMHRGRPALHQDLKVPTNSSMS*LSRKSP Trigger: TGGAGACTTCCTGCTGAGCAAGCTCATGGAGCTGTT...GGTTGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CAA 90 bp | ATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCAACCGTGAAAGCGCCTTGCTaGGAAGCGGGTAAAACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ICMHRGRPALHQDLKVPTVKAPC*EAGKTF Trigger: GAAGGTTTTACCCGCTTCCAAGCAAGGCGCTTTCAC...GGTTGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CAA 90 bp | ATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCAACCTTCTGGAAGGGCTTCTaGGAATGTGGCTGTCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ICMHRGRPALHQDLKVPTFWKGF*ECGCLS Trigger: GCTGAGACAGCCACATTCCAAGAAGCCCTTCCAGAA...GGTTGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CAA 90 bp | TTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCATTGATTTCCTCCTTTTaGCTGGTGGGGGCCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FICMHRGRPALHQDLKVPLISSF*LVGAWW Trigger: CCACCAGGCCCCCACCAGCAAAAAGGAGGAAATCAA...TGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CAA 90 bp | TTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCGCCTGGACTGCTCCTTaGGATAACTCTCCAGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: FHMYAQGEASLASGSKSSAWTAP*DNSPGN Trigger: ATTGCCTGGAGAGTTATCCAAAGGAGCAGTCCAGGC...GGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CAA 90 bp | TTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCAAATCCCCCTCTGCTTaGTCATCCTTTCTGGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FHMYAQGEASLASGSKSSKSPSA*SSFLGW Trigger: CCACCCCAGAAAGGATGACAAAGCAGAGGGGGATTT...GGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS TCA 90 bp | TGTCTTTCTCATCCTTGTTCGTCTTCACAGCAGGGTCTTTGGAGATaGCTCCTGTGCCACTACAAGGAGCATCCAGTAGCACTCGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: CLSHPCSSSQQGLWR*LLCHYKEHPVALDQ Trigger: TTGATCGAGTGCTACTGGATGCTCCTTGTAGTGGCACAGGAGTCATCTCCAAAGACCCTGCTGTGAAGACGAACAAGGATGAGAAAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CAA 90 bp | ATATGTATATTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGGGCCTGGTAGACACTaGGGCATCTGGGACAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ICILNFICMHRGRPALHQGPGRH*GIWDRR Trigger: CCTTCTGTCCCAGATGCCCAAGTGTCTACCAGGCCC...CTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAATATACATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CAA 90 bp | TTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCCATCACTGTTTTGAATaGGTGCTGGGCGCTTCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: FHMYAQGEASLASGSKSSHHCFE*VLGASY Trigger: GTAAGAAGCGCCCAGCACCAATTCAAAACAGTGATG...GGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CAA 90 bp | TTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGGGGCTGAGGGTCCCTaGGAAACAGCATCTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LNFICMHRGRPALHQDLKGAEGP*ETASSF Trigger: GAAAGAAGATGCTGTTTCCAAGGGACCCTCAGCCCC...TTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CAA 90 bp | TTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCAGCTGGCTGTTGCCCTTaGTCATTGATTTCCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FICMHRGRPALHQDLKVPAGCCP*SLISSF Trigger: AAAGGAGGAAATCAATGACAAAGGGCAACAGCCAGC...TGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CAA 90 bp | ATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCAACCTCTCCAGGCAATGTTTaGATCCCAGGAGACTTATTT | + |
|
Preference number: 5 (lower is better) Translates to: ICMHRGRPALHQDLKVPTSPGNV*IPGDLF Trigger: AAATAAGTCTCCTGGGATCAAAACATTGCCTGGAGA...GGTTGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CAA 90 bp | ATATGTATATTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGTCTGCATTGGCATCGTaGGCAAGGATCACTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ICILNFICMHRGRPALHQSALAS*ARITPV Trigger: CACAGGAGTGATCCTTGCCAACGATGCCAATGCAGA...CTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAATATACATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CAA 90 bp | ATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCAACCGAAAATTTCTTGAACTaGGCGATAAAGAAACCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ICMHRGRPALHQDLKVPTENFLN*AIKKPS Trigger: GGACGGTTTCTTTATCGCCAAGTTCAAGAAATTTTC...GGTTGGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CAA 90 bp | TTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGTTCCTGTTGCCCTTTGTCATaGATTTCCTCCTTTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FHMYAQGEASLASGSKSSCCPLS*ISSFLL Trigger: CAGCAAAAAGGAGGAAATCAATGACAAAGGGCAACA...GGAACTTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CAA 90 bp | ATATGTATATTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGCCTTTCTGTTTCTTTTaGGCTTCCCCAAGGGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: ICILNFICMHRGRPALHQPFCFF*ASPRDG Trigger: TCCATCCCTTGGGGAAGCCAAAAAGAAACAGAAAGG...CTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAATATACATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS-3UTR CAA 90 bp | TTAAATTTCATATGTATGCACAGGGGGAGGCCAGCCTTGCATCAGGATCTAAAAGGCTGGGGAATAGAATaGGAAAATTTCTTGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LNFICMHRGRPALHQDLKGWGIE*ENFLNL Trigger: CAAGTTCAAGAAATTTTCCAATTCTATTCCCCAGCC...TTTTAGATCCTGATGCAAGGCTGGCCTCCCCCTGTGCATACATATGAAATTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
||
| CDS CAA 90 bp | GTAGAAGCGCCGGGTGGAACGCAGAGTGGGGTGAAAGCGCCTTGCTaGGAAGCGGGTAAAACCTTCCTGGCCGAAGTCCAGGCCGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VEAPGGTQSGVKAPC*EAGKTFLAEVQAGG Trigger: CCCACCGGCCTGGACTTCGGCCAGGAAGGTTTTACCCGCTTCCAAGCAAGGCGCTTTCACCCCACTCTGCGTTCCACCCGGCGCTTCTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS GCA 72 bp | GCGCCGGGTGGAACGCAGAGTGGGGTGAAAGCGCCTTaGTTGGAAGCGGGTAAAACCTTCCTGGCCGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: APGGTQSGVKAP*LEAGKTFLAEV Trigger: GACTTCGGCCAGGAAGGTTTTACCCGCTTCCAAGCAAGGCGCTTTCACCCCACTCTGCGTTCCACCCGGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS CCA 72 bp | GGCTTCCCCAAGGGATGGAGCACAGTCCTTAGGCCTTaGGGCAGCACGGATTTCAGAGGGAGTCGGCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: GFPKGWSTVLRP*GSTDFRGSRHR Trigger: CCTGTGCCGACTCCCTCTGAAATCCGTGCTGCCCCAAGGCCTAAGGACTGTGCTCCATCCCTTGGGGAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS CAA 72 bp | TTTGGCTTAGGGACGTCAACAGACCCTGCCCTCCTCTaGGCTGCCCGCTTTCGGGCACGACTCGACAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FGLGTSTDPALL*AARFRARLDSL Trigger: GAGGCTGTCGAGTCGTGCCCGAAAGCGGGCAGCCAAGAGGAGGGCAGGGTCTGTTGACGTCCCTAAGCCAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044200.11 ENSMUST00000204185.2 |
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| CDS CAA 72 bp | GTGACTCCCAAGCGGTGCAGGTTGCCCACCACGCTCTaGAGCCGGTCTGCATTGGCATCGTTGGCAAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: VTPKRCRLPTTL*SRSALASLARI Trigger: GATCCTTGCCAACGATGCCAATGCAGACCGGCTCAAGAGCGTGGTGGGCAACCTGCACCGCTTGGGAGTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS CAA 72 bp | CCGGGTGGAACGCAGAGTGGGGTGAAAGCGCCTTGCTaGGAAGCGGGTAAAACCTTCCTGGCCGAAGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PGGTQSGVKAPC*EAGKTFLAEVQ Trigger: CTGGACTTCGGCCAGGAAGGTTTTACCCGCTTCCAAGCAAGGCGCTTTCACCCCACTCTGCGTTCCACCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS TCA 72 bp | CTTAGATACTCAGCTCGAGACCGGCCCTCTTCTCGCTaGGCTCCGAAATCCCGCAGCACTCCCACGATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LRYSARDRPSSR*APKSRSTPTMS Trigger: GGACATCGTGGGAGTGCTGCGGGATTTCGGAGCTCAGCGAGAAGAGGGCCGGTCTCGAGCTGAGTATCTAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS GCA 72 bp | GCGGTGCAGGTTGCCCACCACGCTCTTGAGCCGGTCTaGATTGGCATCGTTGGCAAGGATCACTCCTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: AVQVAHHALEPV*IGIVGKDHSCV Trigger: AACACAGGAGTGATCCTTGCCAACGATGCCAATGCAGACCGGCTCAAGAGCGTGGTGGGCAACCTGCACCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS CAA 72 bp | CTGATGATGGTGTTGGTGACTCCCAAGCGGTGCAGGTaGCCCACCACGCTCTTGAGCCGGTCTGCATTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LMMVLVTPKRCR*PTTLLSRSALA Trigger: TGCCAATGCAGACCGGCTCAAGAGCGTGGTGGGCAACCTGCACCGCTTGGGAGTCACCAACACCATCATCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS CAA 90 bp | ATGGTGTTGGTGACTCCCAAGCGGTGCAGGTTGCCCACCACGCTCTaGAGCCGGTCTGCATTGGCATCGTTGGCAAGGATCACTCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: MVLVTPKRCRLPTTL*SRSALASLARITPV Trigger: CACAGGAGTGATCCTTGCCAACGATGCCAATGCAGACCGGCTCAAGAGCGTGGTGGGCAACCTGCACCGCTTGGGAGTCACCAACACCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS CAA 90 bp | GCCCTCCTCTTGGCTGCCCGCTTTCGGGCACGACTCGACAGCCTCTaGGAATTCTCATCGCCAGCTGCAGGCAAAAATCTGACCAATTCG | + |
|
Preference number: 6 (lower is better) Translates to: ALLLAARFRARLDSL*EFSSPAAGKNLTNS Trigger: CGAATTGGTCAGATTTTTGCCTGCAGCTGGCGATGAGAATTCCAAGAGGCTGTCGAGTCGTGCCCGAAAGCGGGCAGCCAAGAGGAGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044200.11 ENSMUST00000204185.2 |
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| CDS CAA 90 bp | CACATCGTCTTCCCCCGAGTCTTCCTCCTCGTCCCCATCACTGTTTaGAATTGGTGCTGGGCGCTTCTTACCTCGAGCCTGGACTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: HIVFPRVFLLVPITV*NWCWALLTSSLDCS Trigger: GGAGCAGTCCAGGCTCGAGGTAAGAAGCGCCCAGCACCAATTCAAAACAGTGATGGGGACGAGGAGGAAGACTCGGGGGAAGACGATGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044200.11 ENSMUST00000204185.2 |
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| CDS GCA 72 bp | AGGAGACTTATTTGGCTTAGGGACGTCAACAGACCCTaGCCTCCTCTTGGCTGCCCGCTTTCGGGCACGACT | + |
|
Preference number: 6 (lower is better) Translates to: RRLIWLRDVNRP*PPLGCPLSGTT Trigger: AGTCGTGCCCGAAAGCGGGCAGCCAAGAGGAGGGCAGGGTCTGTTGACGTCCCTAAGCCAAATAAGTCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044200.11 ENSMUST00000204185.2 |
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| CDS CCA 72 bp | CGTCCATATTGTGAGTGTGAGGGTAGAAGCGCCGGGTaGAACGCAGAGTGGGGTGAAAGCGCCTTGCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RPYCECEGRSAG*NAEWGESALLG Trigger: TCCAAGCAAGGCGCTTTCACCCCACTCTGCGTTCCACCCGGCGCTTCTACCCTCACACTCACAATATGGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS CAA 90 bp | TCTGGAAGGGCTTCTTGGAATGTGGCTGTCTCAGCAACTGCTGCTTaGCCTTCACAGCCCCACGGGCTTTCTTGGTGGGCTGACTACCGT | + |
|
Preference number: 6 (lower is better) Translates to: SGRASWNVAVSATAA*PSQPHGLSWWADYR Trigger: ACGGTAGTCAGCCCACCAAGAAAGCCCGTGGGGCTGTGAAGGCAAAGCAGCAGTTGCTGAGACAGCCACATTCCAAGAAGCCCTTCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS TCA 72 bp | CTAAGATCCGCTCATGCTCCTGAGGTGCCAGGGCCATaGCGGGCAACATACTGGAAGCTCCCTGCAGCATAT | + |
|
Preference number: 6 (lower is better) Translates to: LRSAHAPEVPGP*RATYWKLPAAY Trigger: ATATGCTGCAGGGAGCTTCCAGTATGTTGCCCGTCATGGCCCTGGCACCTCAGGAGCATGAGCGGATCTTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS TCA 72 bp | GGAGCACAGCACATGTCTAAGATCCGCTCATGCTCCTaGGGTGCCAGGGCCATGACGGGCAACATACTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GAQHMSKIRSCS*GARAMTGNILE Trigger: TTCCAGTATGTTGCCCGTCATGGCCCTGGCACCTCAGGAGCATGAGCGGATCTTAGACATGTGCTGTGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS TCA 72 bp | GACCAGGTAGCCTCCGGTCTTGGAGGCAGCGTTCACTaGGTCGATAGCACTGAGCAGCAGTTCCTTCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: DQVASGLGGSVH*VDSTEQQFLLK Trigger: CTTCAGAAGGAACTGCTGCTCAGTGCTATCGACTCAGTGAACGCTGCCTCCAAGACCGGAGGCTACCTGGTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS GCA 72 bp | CTTCTTGGAATGTGGCTGTCTCAGCAACTGCTGCTTTaGCTTCACAGCCCCACGGGCTTTCTTGGTGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLGMWLSQQLLL*LHSPTGFLGGL Trigger: CAGCCCACCAAGAAAGCCCGTGGGGCTGTGAAGGCAAAGCAGCAGTTGCTGAGACAGCCACATTCCAAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS CCA 72 bp | CGAGTCTTCCTCCTCGTCCCCATCACTGTTTTGAATTaGTGCTGGGCGCTTCTTACCTCGAGCCTGGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: RVFLLVPITVLN*CWALLTSSLDC Trigger: GCAGTCCAGGCTCGAGGTAAGAAGCGCCCAGCACCAATTCAAAACAGTGATGGGGACGAGGAGGAAGACTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044200.11 ENSMUST00000204185.2 |
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| CDS CCA 72 bp | CTGGGACAGAAGGTTCAGTGGACAAGCCTGGCCCTTTaGCGATGCCGTTCAACTTCTGGAAGGGCTTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LGQKVQWTSLAL*RCRSTSGRASW Trigger: CCAAGAAGCCCTTCCAGAAGTTGAACGGCATCGCCAAAGGGCCAGGCTTGTCCACTGAACCTTCTGTCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS CCA 72 bp | TTGGGCATCTGGGACAGAAGGTTCAGTGGACAAGCCTaGCCCTTTGGCGATGCCGTTCAACTTCTGGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LGIWDRRFSGQA*PFGDAVQLLEG Trigger: CCCTTCCAGAAGTTGAACGGCATCGCCAAAGGGCCAGGCTTGTCCACTGAACCTTCTGTCCCAGATGCCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS CAA 72 bp | CCGAGTCTTCCTCCTCGTCCCCATCACTGTTTTGAATaGGTGCTGGGCGCTTCTTACCTCGAGCCTGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: PSLPPRPHHCFE*VLGASYLEPGL Trigger: CAGTCCAGGCTCGAGGTAAGAAGCGCCCAGCACCAATTCAAAACAGTGATGGGGACGAGGAGGAAGACTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044200.11 ENSMUST00000204185.2 |
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| CDS CAA 72 bp | TGCAGGTTGCCCACCACGCTCTTGAGCCGGTCTGCATaGGCATCGTTGGCAAGGATCACTCCTGTGTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CRLPTTLLSRSA*ASLARITPVFF Trigger: GAAGAACACAGGAGTGATCCTTGCCAACGATGCCAATGCAGACCGGCTCAAGAGCGTGGTGGGCAACCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS CAA 72 bp | GCTTCTTGGAATGTGGCTGTCTCAGCAACTGCTGCTTaGCCTTCACAGCCCCACGGGCTTTCTTGGTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ASWNVAVSATAA*PSQPHGLSWWA Trigger: AGCCCACCAAGAAAGCCCGTGGGGCTGTGAAGGCAAAGCAGCAGTTGCTGAGACAGCCACATTCCAAGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS CAA 72 bp | AGCATTCCCAGCAGACTGACTGGGCCTGGTAGACACTaGGGCATCTGGGACAGAAGGTTCAGTGGACAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SIPSRLTGPGRH*GIWDRRFSGQA Trigger: GGCTTGTCCACTGAACCTTCTGTCCCAGATGCCCAAGTGTCTACCAGGCCCAGTCAGTCTGCTGGGAATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS CAA 90 bp | AAGCCTGGCCCTTTGGCGATGCCGTTCAACTTCTGGAAGGGCTTCTaGGAATGTGGCTGTCTCAGCAACTGCTGCTTTGCCTTCACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: KPGPLAMPFNFWKGF*ECGCLSNCCFAFTA Trigger: GGCTGTGAAGGCAAAGCAGCAGTTGCTGAGACAGCCACATTCCAAGAAGCCCTTCCAGAAGTTGAACGGCATCGCCAAAGGGCCAGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS CAA 90 bp | ACTTGGGCATCTGGGACAGAAGGTTCAGTGGACAAGCCTGGCCCTTaGGCGATGCCGTTCAACTTCTGGAAGGGCTTCTTGGAATGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: TWASGTEGSVDKPGP*AMPFNFWKGFLECG Trigger: GCCACATTCCAAGAAGCCCTTCCAGAAGTTGAACGGCATCGCCAAAGGGCCAGGCTTGTCCACTGAACCTTCTGTCCCAGATGCCCAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS GCA 72 bp | AAGGGCTTCTTGGAATGTGGCTGTCTCAGCAACTGCTaGTTTGCCTTCACAGCCCCACGGGCTTTCTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: KGFLECGCLSNC*FAFTAPRAFLV Trigger: CACCAAGAAAGCCCGTGGGGCTGTGAAGGCAAAGCAGCAGTTGCTGAGACAGCCACATTCCAAGAAGCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS GCA 72 bp | GTCCCCGCTGCTTCAGCTTCTCAGACCTCTTTCGTTTaGTGTTCACGTCAGCATTCCCAGCAGACTGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: VPAASASQTSFV*CSRQHSQQTDW Trigger: CCAGTCAGTCTGCTGGGAATGCTGACGTGAACAGCAAACGAAAGAGGTCTGAGAAGCTGAAGCAGCGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS GCA 72 bp | GCAGCCTCCTTAGAGGGCTTCCACTTAGGTCCCCGCTaGTTCAGCTTCTCAGACCTCTTTCGTTTGCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: AASLEGFHLGPR*FSFSDLFRLLF Trigger: GAACAGCAAACGAAAGAGGTCTGAGAAGCTGAAGCAGCGGGGACCTAAGTGGAAGCCCTCTAAGGAGGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS CCA 72 bp | GGCTTTCTTGGTGGGCTGACTACCGTTCTCAGACTTTaGGGTGACCTGATCCTTCAGGTCAGGCTCTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: GFLGGLTTVLRL*GDLILQVRLCR Trigger: CCTACAGAGCCTGACCTGAAGGATCAGGTCACCCCAAAGTCTGAGAACGGTAGTCAGCCCACCAAGAAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS CAA 72 bp | TCTGGGACAGAAGGTTCAGTGGACAAGCCTGGCCCTTaGGCGATGCCGTTCAACTTCTGGAAGGGCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SGTEGSVDKPGP*AMPFNFWKGFL Trigger: CAAGAAGCCCTTCCAGAAGTTGAACGGCATCGCCAAAGGGCCAGGCTTGTCCACTGAACCTTCTGTCCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS TCA 72 bp | TTTCGTTTGCTGTTCACGTCAGCATTCCCAGCAGACTaGCTGGGCCTGGTAGACACTTGGGCATCTGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: FRLLFTSAFPAD*LGLVDTWASGT Trigger: TGTCCCAGATGCCCAAGTGTCTACCAGGCCCAGTCAGTCTGCTGGGAATGCTGACGTGAACAGCAAACGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS GCA 72 bp | ACGACTCGACAGCCTCTTGGAATTCTCATCGCCAGCTaGAGGCAAAAATCTGACCAATTCGGTCTCCGCACC | + |
|
Preference number: 6 (lower is better) Translates to: TTRQPLGILIAS*RQKSDQFGLRT Trigger: GGTGCGGAGACCGAATTGGTCAGATTTTTGCCTGCAGCTGGCGATGAGAATTCCAAGAGGCTGTCGAGTCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044200.11 ENSMUST00000204185.2 |
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| CDS GCA 72 bp | CAGAAGGTTCAGTGGACAAGCCTGGCCCTTTGGCGATaGCGTTCAACTTCTGGAAGGGCTTCTTGGAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: QKVQWTSLALWR*RSTSGRASWNV Trigger: CACATTCCAAGAAGCCCTTCCAGAAGTTGAACGGCATCGCCAAAGGGCCAGGCTTGTCCACTGAACCTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS CAA 72 bp | GCTGGGCGCTTCTTACCTCGAGCCTGGACTGCTCCTTaGGATAACTCTCCAGGCAATGTTTTGATCCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: AGRFLPRAWTAP*DNSPGNVLIPG Trigger: TCCTGGGATCAAAACATTGCCTGGAGAGTTATCCAAAGGAGCAGTCCAGGCTCGAGGTAAGAAGCGCCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044200.11 ENSMUST00000204185.2 |
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| CDS TCA 72 bp | TTCACTGAGTCGATAGCACTGAGCAGCAGTTCCTTCTaGAGGTGGGCACAGCGCTGGATGTCTTTCTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: FTESIALSSSSF*RWAQRWMSFSS Trigger: GGATGAGAAAGACATCCAGCGCTGTGCCCACCTTCAGAAGGAACTGCTGCTCAGTGCTATCGACTCAGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS CCA 72 bp | GATGCCGTTCAACTTCTGGAAGGGCTTCTTGGAATGTaGCTGTCTCAGCAACTGCTGCTTTGCCTTCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: DAVQLLEGLLGM*LSQQLLLCLHS Trigger: GCTGTGAAGGCAAAGCAGCAGTTGCTGAGACAGCCACATTCCAAGAAGCCCTTCCAGAAGTTGAACGGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS CCA 72 bp | CTTTGGCGATGCCGTTCAACTTCTGGAAGGGCTTCTTaGAATGTGGCTGTCTCAGCAACTGCTGCTTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LWRCRSTSGRAS*NVAVSATAALP Trigger: AGGCAAAGCAGCAGTTGCTGAGACAGCCACATTCCAAGAAGCCCTTCCAGAAGTTGAACGGCATCGCCAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS CAA 90 bp | CCTCGAGCCTGGACTGCTCCTTTGGATAACTCTCCAGGCAATGTTTaGATCCCAGGAGACTTATTTGGCTTAGGGACGTCAACAGACCCT | + |
|
Preference number: 6 (lower is better) Translates to: PRAWTAPLDNSPGNV*IPGDLFGLGTSTDP Trigger: AGGGTCTGTTGACGTCCCTAAGCCAAATAAGTCTCCTGGGATCAAAACATTGCCTGGAGAGTTATCCAAAGGAGCAGTCCAGGCTCGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044200.11 ENSMUST00000204185.2 |
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| CDS TCA 72 bp | TCTTGGAATTCTCATCGCCAGCTGCAGGCAAAAATCTaGCCAATTCGGTCTCCGCACCCTTCTGTTTTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SWNSHRQLQAKI*PIRSPHPSVFG Trigger: CCCGAAAACAGAAGGGTGCGGAGACCGAATTGGTCAGATTTTTGCCTGCAGCTGGCGATGAGAATTCCAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044200.11 ENSMUST00000204185.2 |
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| CDS TCA 72 bp | CATCCTTGTTCGTCTTCACAGCAGGGTCTTTGGAGATaGCTCCTGTGCCACTACAAGGAGCATCCAGTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: HPCSSSQQGLWR*LLCHYKEHPVA Trigger: TGCTACTGGATGCTCCTTGTAGTGGCACAGGAGTCATCTCCAAAGACCCTGCTGTGAAGACGAACAAGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS CAA 72 bp | TCTTTCTCATCCTTGTTCGTCTTCACAGCAGGGTCTTaGGAGATGACTCCTGTGCCACTACAAGGAGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: SFSSLFVFTAGS*EMTPVPLQGAS Trigger: GGATGCTCCTTGTAGTGGCACAGGAGTCATCTCCAAAGACCCTGCTGTGAAGACGAACAAGGATGAGAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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| CDS TCA 72 bp | AGAACTCGATCAACTCAGACAGAGGGAACAGCTCCATaGGCTTGCTCAGCAGGAAGTCTCCATAAGAATAGT | + |
|
Preference number: 6 (lower is better) Translates to: RTRSTQTEGTAP*ACSAGSLHKNS Trigger: ACTATTCTTATGGAGACTTCCTGCTGAGCAAGCTCATGGAGCTGTTCCCTCTGTCTGAGTTGATCGAGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044200.11 |
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