Pregenerated sensors for NOP14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036693Ensembl transcript IDs: ENSMUST00000041364.13, ENSMUST00000201897.2
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | ATTTGCCTCAGTCGCTGTCAGGGTGCTCAGTCTATTTaGCCAGTGCAAGGGGAGGCTTCCCCTCTGCCAGGT | + |
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Preference number: 3 (lower is better) Translates to: ICLSRCQGAQSI*PVQGEASPLPG Trigger: ACCTGGCAGAGGGGAAGCCTCCCCTTGCACTGGGCAAATAGACTGAGCACCCTGACAGCGACTGAGGCAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201897.2 |
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| CDS-3UTR CCA 90 bp | CAGTCGCTGTCAGGGTGCTCAGTCTATTTGCCCAGTGCAAGGGGAGGCTTCCCCGAGCACATCCAACCCTaGAAACGCTGCCCGGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: QSLSGCSVYLPSARGGFPEHIQP*KRCPAF Trigger: AAAGGCCGGGCAGCGTTTCCAGGGTTGGATGTGCTC...GGGGAAGCCTCCCCTTGCACTGGGCAAATAGACTGAGCACCCTGACAGCGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201897.2 |
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| 3UTR CAA 72 bp | GATTTGCCTCAGTCGCTGTCAGGGTGCTCAGTCTATTaGCCCAGTGCAAGGGGAGGCTTCCCCTCTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: DLPQSLSGCSVY*PSARGGFPSAR Trigger: CCTGGCAGAGGGGAAGCCTCCCCTTGCACTGGGCAAATAGACTGAGCACCCTGACAGCGACTGAGGCAAATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201897.2 |
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| CDS-3UTR GCA 90 bp | TGTCAGGGTGCTCAGTCTATTTGCCCAGTGCAAGGGGAGGCTTCCCCTCTGCCACAACCCTGGAAACGCTaGCCGGCCTTTGGTCTCAAT | + |
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Preference number: 4 (lower is better) Translates to: CQGAQSICPVQGEASPLPQPWKR*PAFGLN Trigger: ATTGAGACCAAAGGCCGGGCAGCGTTTCCAGGGTTG...TGGCAGAGGGGAAGCCTCCCCTTGCACTGGGCAAATAGACTGAGCACCCTGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201897.2 |
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| CDS-3UTR CCA 90 bp | TCAGGGTGCTCAGTCTATTTGCCCAGTGCAAGGGGAGGCTTCCCCTCTGCCAGGACGCTGCCCGGCCTTTaGTCTCAATCATTTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: SGCSVYLPSARGGFPSARTLPGL*SQSFLP Trigger: TGGAAGAAATGATTGAGACCAAAGGCCGGGCAGCGT...CCTGGCAGAGGGGAAGCCTCCCCTTGCACTGGGCAAATAGACTGAGCACCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201897.2 |
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| CDS-3UTR CCA 90 bp | GTCGCTGTCAGGGTGCTCAGTCTATTTGCCCAGTGCAAGGGGAGGCTTCCCCTCGGCAGGAGTCACAACTaGATGCCAGAAATCAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: VAVRVLSLFAQCKGRLPLGRSHN*MPEIRG Trigger: ACCTCTGATTTCTGGCATCCAGTTGTGACTCCTGCC...GAGGGGAAGCCTCCCCTTGCACTGGGCAAATAGACTGAGCACCCTGACAGCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201897.2 |
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| CDS-3UTR GCA 90 bp | CGCTGTCAGGGTGCTCAGTCTATTTGCCCAGTGCAAGGGGAGGCTTCCCCTCTGGGAGTCACAACTGGATaGCAGAAATCAGAGGTTGGA | + |
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Preference number: 4 (lower is better) Translates to: RCQGAQSICPVQGEASPLGVTTG*QKSEVG Trigger: TCCAACCTCTGATTTCTGGCATCCAGTTGTGACTCC...CAGAGGGGAAGCCTCCCCTTGCACTGGGCAAATAGACTGAGCACCCTGACAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201897.2 |
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| CDS-3UTR GCA 90 bp | CTGTCAGGGTGCTCAGTCTATTTGCCCAGTGCAAGGGGAGGCTTCCCCTCTGCCATTTCTTCCATCTCGTaGATGGCATCTCGGAGAACA | + |
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Preference number: 4 (lower is better) Translates to: LSGCSVYLPSARGGFPSAISSIS*MASRRT Trigger: TGTTCTCCGAGATGCCATGCACGAGATGGAAGAAAT...GGCAGAGGGGAAGCCTCCCCTTGCACTGGGCAAATAGACTGAGCACCCTGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201897.2 |
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| CDS-3UTR GCA 90 bp | GCTGTCAGGGTGCTCAGTCTATTTGCCCAGTGCAAGGGGAGGCTTCCCCTCTGCCGAGTTCTTCCCAAGTaGTCTTGGCTCTTTGTGTTT | + |
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Preference number: 4 (lower is better) Translates to: AVRVLSLFAQCKGRLPLCRVLPK*SWLFVF Trigger: AAACACAAAGAGCCAAGAGCACTTGGGAAGAACTCG...GCAGAGGGGAAGCCTCCCCTTGCACTGGGCAAATAGACTGAGCACCCTGACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201897.2 |
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| CDS-3UTR CCA 90 bp | CAGGGTGCTCAGTCTATTTGCCCAGTGCAAGGGGAGGCTTCCCCTCTGCCAGGTCCAGAAATCAGAGGTTaGAAACAACAGCCCAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: QGAQSICPVQGEASPLPGPEIRG*KQQPSD Trigger: ATCACTGGGCTGTTGTTTCCAACCTCTGATTTCTGG...ACCTGGCAGAGGGGAAGCCTCCCCTTGCACTGGGCAAATAGACTGAGCACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201897.2 |
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| CDS CCA 90 bp | TTCCTGATGGCACGAGCGCGGGACACCCCGGGCAGGCCCACATCGTaGCGCGTCTTCCTGCCAAGGATCTGGAACTTCTGCCGGTTGACT | + |
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Preference number: 5 (lower is better) Translates to: FLMARARDTPGRPTS*RVFLPRIWNFCRLT Trigger: AGTCAACCGGCAGAAGTTCCAGATCCTTGGCAGGAAGACGCGCCACGATGTGGGCCTGCCCGGGGTGTCCCGCGCTCGTGCCATCAGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS TCA 90 bp | TCTTGGGGGAGGCTACAATCTGCAAGATGCTTCGACAGGAGGGCTTaGTGGGGCCTGAAGATGGCGTGGAAGGACGGCAGTGCCTGGTAC | + |
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Preference number: 5 (lower is better) Translates to: SWGRLQSARCFDRRA*WGLKMAWKDGSAWY Trigger: GTACCAGGCACTGCCGTCCTTCCACGCCATCTTCAGGCCCCATCAAGCCCTCCTGTCGAAGCATCTTGCAGATTGTAGCCTCCCCCAAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS TCA 90 bp | CTCACACACCAGCGGGCGGCAGTGCTGCTTCTGGCCTTCCATTGCTaGCAGTATGCTTTGAGCCAGCTCCTGAAGTTCTTGGGGGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: LTHQRAAVLLLAFHC*QYALSQLLKFLGEA Trigger: AGCCTCCCCCAAGAACTTCAGGAGCTGGCTCAAAGCATACTGTCAGCAATGGAAGGCCAGAAGCAGCACTGCCGCCCGCTGGTGTGTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS GCA 90 bp | TGCCCAGTGCAAGGGGAGGCTTCCCCTCTGCCAGGTGGTCACATCTaGTTTGTCGGAGACCACGAGCAATTCCGAGTTCTTCCCAAGTGC | + |
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Preference number: 5 (lower is better) Translates to: CPVQGEASPLPGGHI*FVGDHEQFRVLPKC Trigger: GCACTTGGGAAGAACTCGGAATTGCTCGTGGTCTCCGACAAAGCAGATGTGACCACCTGGCAGAGGGGAAGCCTCCCCTTGCACTGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS GCA 90 bp | AAGATGGCGTGGAAGGACGGCAGTGCCTGGTACATGAGCACGCAGTaGTTCATCAGGCTCAAACACGAGGCTACGCAGGACAGCCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: KMAWKDGSAWYMSTQ*FIRLKHEATQDSLV Trigger: CACCAGGCTGTCCTGCGTAGCCTCGTGTTTGAGCCTGATGAAGCACTGCGTGCTCATGTACCAGGCACTGCCGTCCTTCCACGCCATCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS GCA 90 bp | CAGGAGGGCTTGATGGGGCCTGAAGATGGCGTGGAAGGACGGCAGTaGCTGGTACATGAGCACGCAGTGCTTCATCAGGCTCAAACACGA | + |
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Preference number: 5 (lower is better) Translates to: QEGLMGPEDGVEGRQ*LVHEHAVLHQAQTR Trigger: TCGTGTTTGAGCCTGATGAAGCACTGCGTGCTCATGTACCAGGCACTGCCGTCCTTCCACGCCATCTTCAGGCCCCATCAAGCCCTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CCA 90 bp | CCTGCCAAGGATCTGGAACTTCTGCCGGTTGACTTTCACTTCAAATaGGTTTGGGTTAGTTTTCGCCGGGCCTCCGGACGCCCCTGCGGG | + |
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Preference number: 5 (lower is better) Translates to: PAKDLELLPVDFHFK*VWVSFRRASGRPCG Trigger: CCCGCAGGGGCGTCCGGAGGCCCGGCGAAAACTAACCCAAACCCATTTGAAGTGAAAGTCAACCGGCAGAAGTTCCAGATCCTTGGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS-3UTR CAA 90 bp | AGGGTGCTCAGTCTATTTGCCCAGTGCAAGGGGAGGCTTCCCCTCTGCCAGGTGAACGCTGCCCGGCCTTaGGTCTCAATCATTTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: RVLSLFAQCKGRLPLCQVNAARP*VSIISS Trigger: GGAAGAAATGATTGAGACCAAAGGCCGGGCAGCGTT...CACCTGGCAGAGGGGAAGCCTCCCCTTGCACTGGGCAAATAGACTGAGCACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201897.2 |
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| CDS CCA 90 bp | AAGGATCTGGAACTTCTGCCGGTTGACTTTCACTTCAAATGGGTTTaGGTTAGTTTTCGCCGGGCCTCCGGACGCCCCTGCGGGCGCTTT | + |
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Preference number: 5 (lower is better) Translates to: KDLELLPVDFHFKWV*VSFRRASGRPCGRF Trigger: AAAGCGCCCGCAGGGGCGTCCGGAGGCCCGGCGAAAACTAACCCAAACCCATTTGAAGTGAAAGTCAACCGGCAGAAGTTCCAGATCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CCA 90 bp | ACCCCGGGCAGGCCCACATCGTGGCGCGTCTTCCTGCCAAGGATCTaGAACTTCTGCCGGTTGACTTTCACTTCAAATGGGTTTGGGTTA | + |
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Preference number: 5 (lower is better) Translates to: TPGRPTSWRVFLPRI*NFCRLTFTSNGFGL Trigger: TAACCCAAACCCATTTGAAGTGAAAGTCAACCGGCAGAAGTTCCAGATCCTTGGCAGGAAGACGCGCCACGATGTGGGCCTGCCCGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CCA 90 bp | TCAGTCTATTTGCCCAGTGCAAGGGGAGGCTTCCCCTCTGCCAGGTaGTCACATCTGCTTTGTCGGAGACCACGAGCAATTCCGAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: SVYLPSARGGFPSAR*SHLLCRRPRAIPSS Trigger: AGAACTCGGAATTGCTCGTGGTCTCCGACAAAGCAGATGTGACCACCTGGCAGAGGGGAAGCCTCCCCTTGCACTGGGCAAATAGACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS-3UTR CAA 90 bp | TGTCAGGGTGCTCAGTCTATTTGCCCAGTGCAAGGGGAGGCTTCCCCTCTGCCATCTTCCCAAGTGCTCTaGGCTCTTTGTGTTTGGAGT | + |
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Preference number: 5 (lower is better) Translates to: CQGAQSICPVQGEASPLPSSQVL*ALCVWS Trigger: ACTCCAAACACAAAGAGCCAAGAGCACTTGGGAAGA...TGGCAGAGGGGAAGCCTCCCCTTGCACTGGGCAAATAGACTGAGCACCCTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201897.2 |
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| CDS TCA 90 bp | GCATCCCTTTCCATGATTTCTGAGAGCTGCATCCTGGCCAGGAACTaGTTGTCCTTTCGGATCTCTCGGACGGCGCCTTTAAATTCCCGC | + |
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Preference number: 5 (lower is better) Translates to: ASLSMISESCILARN*LSFRISRTAPLNSR Trigger: GCGGGAATTTAAAGGCGCCGTCCGAGAGATCCGAAAGGACAATCAGTTCCTGGCCAGGATGCAGCTCTCAGAAATCATGGAAAGGGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS GCA 90 bp | AGGCCCACATCGTGGCGCGTCTTCCTGCCAAGGATCTGGAACTTCTaGCGGTTGACTTTCACTTCAAATGGGTTTGGGTTAGTTTTCGCC | + |
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Preference number: 5 (lower is better) Translates to: RPTSWRVFLPRIWNF*RLTFTSNGFGLVFA Trigger: GGCGAAAACTAACCCAAACCCATTTGAAGTGAAAGTCAACCGGCAGAAGTTCCAGATCCTTGGCAGGAAGACGCGCCACGATGTGGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS-3UTR CAA 90 bp | TTGCCTCAGTCGCTGTCAGGGTGCTCAGTCTATTTGCCCAGTGCAAGGGGAGGCAGTGCTCTTGGCTCTTaGTGTTTGGAGTTGCTATAT | + |
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Preference number: 5 (lower is better) Translates to: LPQSLSGCSVYLPSARGGSALGS*CLELLY Trigger: ATATAGCAACTCCAAACACAAAGAGCCAAGAGCACT...GCCTCCCCTTGCACTGGGCAAATAGACTGAGCACCCTGACAGCGACTGAGGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201897.2 |
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| CDS-3UTR CAA 90 bp | TTTGCCTCAGTCGCTGTCAGGGTGCTCAGTCTATTTGCCCAGTGCAAGGGGAGGATCCCAAGTAGAAAATaGAATAGCTCGGGGATGAAC | + |
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Preference number: 5 (lower is better) Translates to: FASVAVRVLSLFAQCKGRIPSRK*NSSGMN Trigger: GTTCATCCCCGAGCTATTCAATTTTCTACTTGGGAT...CCTCCCCTTGCACTGGGCAAATAGACTGAGCACCCTGACAGCGACTGAGGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000201897.2 |
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| CDS GCA 90 bp | GGAAACGCTGCCCGGCCTTTGGTCTCAATCATTTCTTCCATCTCGTaGATGGCATCTCGGAGAACAAATCTTATGGAGTCACTTGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: GNAARPLVSIISSIS*MASRRTNLMESLAD Trigger: GTCTGCAAGTGACTCCATAAGATTTGTTCTCCGAGATGCCATGCACGAGATGGAAGAAATGATTGAGACCAAAGGCCGGGCAGCGTTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS GCA 90 bp | ATCTGCTTTGTCGGAGACCACGAGCAATTCCGAGTTCTTCCCAAGTaGTCTAAAAGGGTGCACCAGAGTGGAACCTTGGCTCTTTGTGTT | + |
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Preference number: 5 (lower is better) Translates to: ICFVGDHEQFRVLPK*SKRVHQSGTLALCV Trigger: AACACAAAGAGCCAAGGTTCCACTCTGGTGCACCCTTTTAGAGCACTTGGGAAGAACTCGGAATTGCTCGTGGTCTCCGACAAAGCAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CCA 90 bp | ACGCTGCCCGGCCTTTGGTCTCAATCATTTCTTCCATCTCGTGCATaGCATCTCGGAGAACAAATCTTATGGAGTCACTTGCAGACTCAG | + |
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Preference number: 5 (lower is better) Translates to: TLPGLWSQSFLPSRA*HLGEQILWSHLQTQ Trigger: CTGAGTCTGCAAGTGACTCCATAAGATTTGTTCTCCGAGATGCCATGCACGAGATGGAAGAAATGATTGAGACCAAAGGCCGGGCAGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS-3UTR CAA 90 bp | AGTCGCTGTCAGGGTGCTCAGTCTATTTGCCCAGTGCAAGGGGAGGCTTCCCCTCTTGGCTCTTTGTGTTaGGAGTTGCTATATAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: SRCQGAQSICPVQGEASPLGSLC*ELLYKE Trigger: TTCTTTATATAGCAACTCCAAACACAAAGAGCCAAG...AGGGGAAGCCTCCCCTTGCACTGGGCAAATAGACTGAGCACCCTGACAGCGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201897.2 |
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| CDS TCA 90 bp | CTCGCTGAGCCTGTCTTTCCCTCTTCTCTTGCTTTGACTTTGCAATaGGCTCCTCAATCAGTTCCTTCCGTGTCTTTGGCTTGTCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: LAEPVFPSSLALTLQ*APQSVPSVSLACLH Trigger: ATGGAGACAAGCCAAAGACACGGAAGGAACTGATTGAGGAGCTCATTGCAAAGTCAAAGCAAGAGAAGAGGGAAAGACAGGCTCAGCGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS GCA 90 bp | GAGACCACGAGCAATTCCGAGTTCTTCCCAAGTGCTCTAAAAGGGTaGACCAGAGTGGAACCTTGGCTCTTTGTGTTTGGAGTTGCTATA | + |
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Preference number: 5 (lower is better) Translates to: ETTSNSEFFPSALKG*TRVEPWLFVFGVAI Trigger: TATAGCAACTCCAAACACAAAGAGCCAAGGTTCCACTCTGGTGCACCCTTTTAGAGCACTTGGGAAGAACTCGGAATTGCTCGTGGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS GCA 90 bp | GTAAGCATCTGGCTCATACACAGCAGGGCAGGAGTCACAACTGGATaGCAGAAATCAGAGGTTGGAAACAACAGCCCAGTGATTTTCAAA | + |
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Preference number: 5 (lower is better) Translates to: VSIWLIHSRAGVTTG*QKSEVGNNSPVIFK Trigger: TTTGAAAATCACTGGGCTGTTGTTTCCAACCTCTGATTTCTGGCATCCAGTTGTGACTCCTGCCCTGCTGTGTATGAGCCAGATGCTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041364.13 ENSMUST00000201897.2 |
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| CDS CCA 90 bp | CTTAGTAAGCATCTGGCTCATACACAGCAGGGCAGGAGTCACAACTaGATGCCAGAAATCAGAGGTTGGAAACAACAGCCCAGTGATTTT | + |
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Preference number: 5 (lower is better) Translates to: LSKHLAHTQQGRSHN*MPEIRGWKQQPSDF Trigger: AAAATCACTGGGCTGTTGTTTCCAACCTCTGATTTCTGGCATCCAGTTGTGACTCCTGCCCTGCTGTGTATGAGCCAGATGCTTACTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041364.13 ENSMUST00000201897.2 |
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| CDS CCA 90 bp | TTTATCACATCTTGTAGGGACATGACTGGACACTTAGTAAGCATCTaGCTCATACACAGCAGGGCAGGAGTCACAACTGGATGCCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: FITSCRDMTGHLVSI*LIHSRAGVTTGCQK Trigger: TTTCTGGCATCCAGTTGTGACTCCTGCCCTGCTGTGTATGAGCCAGATGCTTACTAAGTGTCCAGTCATGTCCCTACAAGATGTGATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041364.13 ENSMUST00000201897.2 |
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| CDS CCA 90 bp | ACACAGCAGGGCAGGAGTCACAACTGGATGCCAGAAATCAGAGGTTaGAAACAACAGCCCAGTGATTTTCAAATAAATGAGCACATCCAA | + |
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Preference number: 5 (lower is better) Translates to: TQQGRSHNWMPEIRG*KQQPSDFQINEHIQ Trigger: TTGGATGTGCTCATTTATTTGAAAATCACTGGGCTGTTGTTTCCAACCTCTGATTTCTGGCATCCAGTTGTGACTCCTGCCCTGCTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041364.13 ENSMUST00000201897.2 |
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| CDS GCA 90 bp | GCTCCAGAGCAAATCTCTTCATCATCTTTTCCTCTGGGCTTATGTTaGTATTATACTCCCCAAAGCGTTTGTCTGCGAACACATTGGACT | + |
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Preference number: 5 (lower is better) Translates to: APEQISSSSFPLGLC*YYTPQSVCLRTHWT Trigger: AGTCCAATGTGTTCGCAGACAAACGCTTTGGGGAGTATAATAGCAACATAAGCCCAGAGGAAAAGATGATGAAGAGATTTGCTCTGGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CCA 90 bp | CGGAGAACAAATCTTATGGAGTCACTTGCAGACTCAGGAAACATCTaGCAAAGACTATATAAGTGCACAACCAACTTATCGATGGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: RRTNLMESLADSGNI*QRLYKCTTNLSMVL Trigger: CAAGACCATCGATAAGTTGGTTGTGCACTTATATAGTCTTTGCCAGATGTTTCCTGAGTCTGCAAGTGACTCCATAAGATTTGTTCTCCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CCA 90 bp | TCATTTCTTCCATCTCGTGCATGGCATCTCGGAGAACAAATCTTATaGAGTCACTTGCAGACTCAGGAAACATCTGGCAAAGACTATATA | + |
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Preference number: 5 (lower is better) Translates to: SFLPSRAWHLGEQIL*SHLQTQETSGKDYI Trigger: TATATAGTCTTTGCCAGATGTTTCCTGAGTCTGCAAGTGACTCCATAAGATTTGTTCTCCGAGATGCCATGCACGAGATGGAAGAAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CCA 90 bp | TTATGTTGCTATTATACTCCCCAAAGCGTTTGTCTGCGAACACATTaGACTTGTTCCTTTCTTTGTACTCCTTTAGTAAAGTTTGGGTTC | + |
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Preference number: 5 (lower is better) Translates to: LCCYYTPQSVCLRTH*TCSFLCTPLVKFGF Trigger: GAACCCAAACTTTACTAAAGGAGTACAAAGAAAGGAACAAGTCCAATGTGTTCGCAGACAAACGCTTTGGGGAGTATAATAGCAACATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CCA 72 bp | TTCGCCGGGCCTCCGGACGCCCCTGCGGGCGCTTTGTaGACCTGCCTCCGCGCCCCAGTCCGCTTGGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: FAGPPDAPAGAL*TCLRAPVRLAF Trigger: GAAAGCCAAGCGGACTGGGGCGCGGAGGCAGGTCCACAAAGCGCCCGCAGGGGCGTCCGGAGGCCCGGCGAA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CCA 72 bp | GCACGAGCGCGGGACACCCCGGGCAGGCCCACATCGTaGCGCGTCTTCCTGCCAAGGATCTGGAACTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: ARARDTPGRPTS*RVFLPRIWNFC Trigger: GCAGAAGTTCCAGATCCTTGGCAGGAAGACGCGCCACGATGTGGGCCTGCCCGGGGTGTCCCGCGCTCGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS TCA 72 bp | CTGCAAGATGCTTCGACAGGAGGGCTTGATGGGGCCTaGAGATGGCGTGGAAGGACGGCAGTGCCTGGTACA | + |
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Preference number: 6 (lower is better) Translates to: LQDASTGGLDGA*RWRGRTAVPGT Trigger: TGTACCAGGCACTGCCGTCCTTCCACGCCATCTTCAGGCCCCATCAAGCCCTCCTGTCGAAGCATCTTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS GCA 72 bp | TCAGTCGCTGTCAGGGTGCTCAGTCTATTTGCCCAGTaGAAGGGGAGGCTTCCCCTCTGCCAGGTGGTCACA | + |
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Preference number: 6 (lower is better) Translates to: SVAVRVLSLFAQ*KGRLPLCQVVT Trigger: TGTGACCACCTGGCAGAGGGGAAGCCTCCCCTTGCACTGGGCAAATAGACTGAGCACCCTGACAGCGACTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS GCA 72 bp | AGTCTATTTGCCCAGTGCAAGGGGAGGCTTCCCCTCTaGCAGGTGGTCACATCTGCTTTGTCGGAGACCACG | + |
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Preference number: 6 (lower is better) Translates to: SLFAQCKGRLPL*QVVTSALSETT Trigger: CGTGGTCTCCGACAAAGCAGATGTGACCACCTGGCAGAGGGGAAGCCTCCCCTTGCACTGGGCAAATAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS GCA 72 bp | TGGAAGGACGGCAGTGCCTGGTACATGAGCACGCAGTaGTTCATCAGGCTCAAACACGAGGCTACGCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: WKDGSAWYMSTQ*FIRLKHEATQD Trigger: GTCCTGCGTAGCCTCGTGTTTGAGCCTGATGAAGCACTGCGTGCTCATGTACCAGGCACTGCCGTCCTTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS GCA 72 bp | TTGATGGGGCCTGAAGATGGCGTGGAAGGACGGCAGTaGCTGGTACATGAGCACGCAGTGCTTCATCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: LMGPEDGVEGRQ*LVHEHAVLHQA Trigger: AGCCTGATGAAGCACTGCGTGCTCATGTACCAGGCACTGCCGTCCTTCCACGCCATCTTCAGGCCCCATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS GCA 72 bp | ACGGGCTTGCTCTTCTCACACACCAGCGGGCGGCAGTaGTGCTTCTGGCCTTCCATTGCTGACAGTATGCTT | + |
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Preference number: 6 (lower is better) Translates to: TGLLFSHTSGRQ*CFWPSIADSML Trigger: AAGCATACTGTCAGCAATGGAAGGCCAGAAGCAGCACTGCCGCCCGCTGGTGTGTGAGAAGAGCAAGCCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CCA 72 bp | TTGCCCAGTGCAAGGGGAGGCTTCCCCTCTGCCAGGTaGTCACATCTGCTTTGTCGGAGACCACGAGCAATT | + |
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Preference number: 6 (lower is better) Translates to: LPSARGGFPSAR*SHLLCRRPRAI Trigger: AATTGCTCGTGGTCTCCGACAAAGCAGATGTGACCACCTGGCAGAGGGGAAGCCTCCCCTTGCACTGGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CCA 72 bp | TGGGGCCTGAAGATGGCGTGGAAGGACGGCAGTGCCTaGTACATGAGCACGCAGTGCTTCATCAGGCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: WGLKMAWKDGSA*YMSTQCFIRLK Trigger: TTTGAGCCTGATGAAGCACTGCGTGCTCATGTACCAGGCACTGCCGTCCTTCCACGCCATCTTCAGGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CAA 72 bp | GGGAGGCTTCCCCTCTGCCAGGTGGTCACATCTGCTTaGTCGGAGACCACGAGCAATTCCGAGTTCTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: GRLPLCQVVTSA*SETTSNSEFFP Trigger: TGGGAAGAACTCGGAATTGCTCGTGGTCTCCGACAAAGCAGATGTGACCACCTGGCAGAGGGGAAGCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CAA 90 bp | CAGTGCAAGGGGAGGCTTCCCCTCTGCCAGGTGGTCACATCTGCTTaGTCGGAGACCACGAGCAATTCCGAGTTCTTCCCAAGTGCTCTA | + |
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Preference number: 6 (lower is better) Translates to: QCKGRLPLCQVVTSA*SETTSNSEFFPSAL Trigger: TAGAGCACTTGGGAAGAACTCGGAATTGCTCGTGGTCTCCGACAAAGCAGATGTGACCACCTGGCAGAGGGGAAGCCTCCCCTTGCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CAA 90 bp | TCTTCTCACACACCAGCGGGCGGCAGTGCTGCTTCTGGCCTTCCATaGCTGACAGTATGCTTTGAGCCAGCTCCTGAAGTTCTTGGGGGA | + |
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Preference number: 6 (lower is better) Translates to: SSHTPAGGSAASGLP*LTVCFEPAPEVLGG Trigger: TCCCCCAAGAACTTCAGGAGCTGGCTCAAAGCATACTGTCAGCAATGGAAGGCCAGAAGCAGCACTGCCGCCCGCTGGTGTGTGAGAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS TCA 72 bp | CGTGTCTTTGGCTTGTCTCCATCCTCGCCCTCCTTCTaGGAGCTGTTCTTGTGGACCCCACCACCAAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: RVFGLSPSSPSF*ELFLWTPPPKW Trigger: CCACTTTGGTGGTGGGGTCCACAAGAACAGCTCTCAGAAGGAGGGCGAGGATGGAGACAAGCCAAAGACACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS TCA 72 bp | CAGCGGGCGGCAGTGCTGCTTCTGGCCTTCCATTGCTaGCAGTATGCTTTGAGCCAGCTCCTGAAGTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: QRAAVLLLAFHC*QYALSQLLKFL Trigger: CAAGAACTTCAGGAGCTGGCTCAAAGCATACTGTCAGCAATGGAAGGCCAGAAGCAGCACTGCCGCCCGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS GCA 72 bp | CAAGGGGAGGCTTCCCCTCTGCCAGGTGGTCACATCTaGTTTGTCGGAGACCACGAGCAATTCCGAGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: QGEASPLPGGHI*FVGDHEQFRVL Trigger: AAGAACTCGGAATTGCTCGTGGTCTCCGACAAAGCAGATGTGACCACCTGGCAGAGGGGAAGCCTCCCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS GCA 72 bp | ACAGCCTGGTGTGATTTGCCTCAGTCGCTGTCAGGGTaGTCAGTCTATTTGCCCAGTGCAAGGGGAGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: TAWCDLPQSLSG*SVYLPSARGGF Trigger: GAAGCCTCCCCTTGCACTGGGCAAATAGACTGAGCACCCTGACAGCGACTGAGGCAAATCACACCAGGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CCA 72 bp | GAACTTCTGCCGGTTGACTTTCACTTCAAATGGGTTTaGGTTAGTTTTCGCCGGGCCTCCGGACGCCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: ELLPVDFHFKWV*VSFRRASGRPC Trigger: GCAGGGGCGTCCGGAGGCCCGGCGAAAACTAACCCAAACCCATTTGAAGTGAAAGTCAACCGGCAGAAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CAA 72 bp | ACACCAGCGGGCGGCAGTGCTGCTTCTGGCCTTCCATaGCTGACAGTATGCTTTGAGCCAGCTCCTGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: TPAGGSAASGLP*LTVCFEPAPEV Trigger: AACTTCAGGAGCTGGCTCAAAGCATACTGTCAGCAATGGAAGGCCAGAAGCAGCACTGCCGCCCGCTGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CCA 72 bp | AGGCCCACATCGTGGCGCGTCTTCCTGCCAAGGATCTaGAACTTCTGCCGGTTGACTTTCACTTCAAATGGG | + |
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Preference number: 6 (lower is better) Translates to: RPTSWRVFLPRI*NFCRLTFTSNG Trigger: CCCATTTGAAGTGAAAGTCAACCGGCAGAAGTTCCAGATCCTTGGCAGGAAGACGCGCCACGATGTGGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS GCA 72 bp | GTCGGAGACCACGAGCAATTCCGAGTTCTTCCCAAGTaGTCTAAAAGGGTGCACCAGAGTGGAACCTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: VGDHEQFRVLPK*SKRVHQSGTLA Trigger: AGCCAAGGTTCCACTCTGGTGCACCCTTTTAGAGCACTTGGGAAGAACTCGGAATTGCTCGTGGTCTCCGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CAA 90 bp | ACATCGTGGCGCGTCTTCCTGCCAAGGATCTGGAACTTCTGCCGGTaGACTTTCACTTCAAATGGGTTTGGGTTAGTTTTCGCCGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: TSWRVFLPRIWNFCR*TFTSNGFGLVFAGP Trigger: AGGCCCGGCGAAAACTAACCCAAACCCATTTGAAGTGAAAGTCAACCGGCAGAAGTTCCAGATCCTTGGCAGGAAGACGCGCCACGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS GCA 72 bp | TGGCTCATACACAGCAGGGCAGGAGTCACAACTGGATaGCAGAAATCAGAGGTTGGAAACAACAGCCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: WLIHSRAGVTTG*QKSEVGNNSPV Trigger: CACTGGGCTGTTGTTTCCAACCTCTGATTTCTGGCATCCAGTTGTGACTCCTGCCCTGCTGTGTATGAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041364.13 ENSMUST00000201897.2 |
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| CDS CCA 72 bp | TGCAATGAGCTCCTCAATCAGTTCCTTCCGTGTCTTTaGCTTGTCTCCATCCTCGCCCTCCTTCTGAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: CNELLNQFLPCL*LVSILALLLRA Trigger: AGCTCTCAGAAGGAGGGCGAGGATGGAGACAAGCCAAAGACACGGAAGGAACTGATTGAGGAGCTCATTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CCA 72 bp | CATCTGGCTCATACACAGCAGGGCAGGAGTCACAACTaGATGCCAGAAATCAGAGGTTGGAAACAACAGCCC | + |
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Preference number: 6 (lower is better) Translates to: HLAHTQQGRSHN*MPEIRGWKQQP Trigger: GGGCTGTTGTTTCCAACCTCTGATTTCTGGCATCCAGTTGTGACTCCTGCCCTGCTGTGTATGAGCCAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041364.13 ENSMUST00000201897.2 |
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| CDS CAA 72 bp | ATGAGCACATCCAACCCTGGAAACGCTGCCCGGCCTTaGGTCTCAATCATTTCTTCCATCTCGTGCATGGCA | + |
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Preference number: 6 (lower is better) Translates to: MSTSNPGNAARP*VSIISSISCMA Trigger: TGCCATGCACGAGATGGAAGAAATGATTGAGACCAAAGGCCGGGCAGCGTTTCCAGGGTTGGATGTGCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041364.13 ENSMUST00000201897.2 |
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| CDS GCA 72 bp | TCGTGGCGCGTCTTCCTGCCAAGGATCTGGAACTTCTaGCGGTTGACTTTCACTTCAAATGGGTTTGGGTTA | + |
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Preference number: 6 (lower is better) Translates to: SWRVFLPRIWNF*RLTFTSNGFGL Trigger: TAACCCAAACCCATTTGAAGTGAAAGTCAACCGGCAGAAGTTCCAGATCCTTGGCAGGAAGACGCGCCACGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS GCA 72 bp | GCCCGGCCTTTGGTCTCAATCATTTCTTCCATCTCGTaGATGGCATCTCGGAGAACAAATCTTATGGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: ARPLVSIISSIS*MASRRTNLMES Trigger: TGACTCCATAAGATTTGTTCTCCGAGATGCCATGCACGAGATGGAAGAAATGATTGAGACCAAAGGCCGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CAA 72 bp | CGCGTCTTCCTGCCAAGGATCTGGAACTTCTGCCGGTaGACTTTCACTTCAAATGGGTTTGGGTTAGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: RVFLPRIWNFCR*TFTSNGFGLVF Trigger: GAAAACTAACCCAAACCCATTTGAAGTGAAAGTCAACCGGCAGAAGTTCCAGATCCTTGGCAGGAAGACGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CCA 72 bp | CCATCTCGTGCATGGCATCTCGGAGAACAAATCTTATaGAGTCACTTGCAGACTCAGGAAACATCTGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: PSRAWHLGEQIL*SHLQTQETSGK Trigger: TTTGCCAGATGTTTCCTGAGTCTGCAAGTGACTCCATAAGATTTGTTCTCCGAGATGCCATGCACGAGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS TCA 72 bp | TTTACGCTTTCTTTCTGCATCCCTTTCCATGATTTCTaGGAGCTGCATCCTGGCCAGGAACTGATTGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: FTLSFCIPFHDF*ELHPGQELIVL Trigger: AAGGACAATCAGTTCCTGGCCAGGATGCAGCTCTCAGAAATCATGGAAAGGGATGCAGAAAGAAAGCGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS GCA 72 bp | TTTCAAATAAATGAGCACATCCAACCCTGGAAACGCTaGCCGGCCTTTGGTCTCAATCATTTCTTCCATCTC | + |
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Preference number: 6 (lower is better) Translates to: FQINEHIQPWKR*PAFGLNHFFHL Trigger: GAGATGGAAGAAATGATTGAGACCAAAGGCCGGGCAGCGTTTCCAGGGTTGGATGTGCTCATTTATTTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041364.13 ENSMUST00000201897.2 |
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| CDS CCA 72 bp | GGCCTTTGGTCTCAATCATTTCTTCCATCTCGTGCATaGCATCTCGGAGAACAAATCTTATGGAGTCACTTG | + |
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Preference number: 6 (lower is better) Translates to: GLWSQSFLPSRA*HLGEQILWSHL Trigger: CAAGTGACTCCATAAGATTTGTTCTCCGAGATGCCATGCACGAGATGGAAGAAATGATTGAGACCAAAGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CAA 90 bp | TCCCCAAAGCGTTTGTCTGCGAACACATTGGACTTGTTCCTTTCTTaGTACTCCTTTAGTAAAGTTTGGGTTCTCTTCCTGATGGCACGA | + |
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Preference number: 6 (lower is better) Translates to: SPKRLSANTLDLFLS*YSFSKVWVLFLMAR Trigger: TCGTGCCATCAGGAAGAGAACCCAAACTTTACTAAAGGAGTACAAAGAAAGGAACAAGTCCAATGTGTTCGCAGACAAACGCTTTGGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CAA 90 bp | TGCTCCAGAGCAAATCTCTTCATCATCTTTTCCTCTGGGCTTATGTaGCTATTATACTCCCCAAAGCGTTTGTCTGCGAACACATTGGAC | + |
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Preference number: 6 (lower is better) Translates to: CSRANLFIIFSSGLM*LLYSPKRLSANTLD Trigger: GTCCAATGTGTTCGCAGACAAACGCTTTGGGGAGTATAATAGCAACATAAGCCCAGAGGAAAAGATGATGAAGAGATTTGCTCTGGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CAA 90 bp | CCATCTCGTGCATGGCATCTCGGAGAACAAATCTTATGGAGTCACTaGCAGACTCAGGAAACATCTGGCAAAGACTATATAAGTGCACAA | + |
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Preference number: 6 (lower is better) Translates to: PSRAWHLGEQILWSH*QTQETSGKDYISAQ Trigger: TTGTGCACTTATATAGTCTTTGCCAGATGTTTCCTGAGTCTGCAAGTGACTCCATAAGATTTGTTCTCCGAGATGCCATGCACGAGATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CCA 72 bp | GGCAGGAGTCACAACTGGATGCCAGAAATCAGAGGTTaGAAACAACAGCCCAGTGATTTTCAAATAAATGAG | + |
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Preference number: 6 (lower is better) Translates to: GRSHNWMPEIRG*KQQPSDFQINE Trigger: CTCATTTATTTGAAAATCACTGGGCTGTTGTTTCCAACCTCTGATTTCTGGCATCCAGTTGTGACTCCTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041364.13 ENSMUST00000201897.2 |
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| CDS CAA 72 bp | AGACTATATAAGTGCACAACCAACTTATCGATGGTCTaGAGGTCTGGTGTGCTGTCTGTAGCCAAATCTCCT | + |
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Preference number: 6 (lower is better) Translates to: RLYKCTTNLSMV*RSGVLSVAKSP Trigger: AGGAGATTTGGCTACAGACAGCACACCAGACCTCAAGACCATCGATAAGTTGGTTGTGCACTTATATAGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CAA 90 bp | ATCTGGCAAAGACTATATAAGTGCACAACCAACTTATCGATGGTCTaGAGGTCTGGTGTGCTGTCTGTAGCCAAATCTCCTATGTATTGC | + |
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Preference number: 6 (lower is better) Translates to: IWQRLYKCTTNLSMV*RSGVLSVAKSPMYC Trigger: GCAATACATAGGAGATTTGGCTACAGACAGCACACCAGACCTCAAGACCATCGATAAGTTGGTTGTGCACTTATATAGTCTTTGCCAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CAA 72 bp | TCTGGGCTTATGTTGCTATTATACTCCCCAAAGCGTTaGTCTGCGAACACATTGGACTTGTTCCTTTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SGLMLLLYSPKR*SANTLDLFLSL Trigger: CAAAGAAAGGAACAAGTCCAATGTGTTCGCAGACAAACGCTTTGGGGAGTATAATAGCAACATAAGCCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CAA 72 bp | GCATGGCATCTCGGAGAACAAATCTTATGGAGTCACTaGCAGACTCAGGAAACATCTGGCAAAGACTATATA | + |
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Preference number: 6 (lower is better) Translates to: AWHLGEQILWSH*QTQETSGKDYI Trigger: TATATAGTCTTTGCCAGATGTTTCCTGAGTCTGCAAGTGACTCCATAAGATTTGTTCTCCGAGATGCCATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CAA 72 bp | AGACCACGAGCAATTCCGAGTTCTTCCCAAGTGCTCTaGGCTCTTTGTGTTTGGAGTTGCTATATAAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: RPRAIPSSSQVL*ALCVWSCYIKN Trigger: ATTCTTTATATAGCAACTCCAAACACAAAGAGCCAAGAGCACTTGGGAAGAACTCGGAATTGCTCGTGGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201897.2 |
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| CDS GCA 72 bp | GCTTATGTTGCTATTATACTCCCCAAAGCGTTTGTCTaGGAACACATTGGACTTGTTCCTTTCTTTGTACTC | + |
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Preference number: 6 (lower is better) Translates to: AYVAIILPKAFV*EHIGLVPFFVL Trigger: GAGTACAAAGAAAGGAACAAGTCCAATGTGTTCGCAGACAAACGCTTTGGGGAGTATAATAGCAACATAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS GCA 72 bp | CAAATCTCTTCATCATCTTTTCCTCTGGGCTTATGTTaGTATTATACTCCCCAAAGCGTTTGTCTGCGAACA | + |
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Preference number: 6 (lower is better) Translates to: QISSSSFPLGLC*YYTPQSVCLRT Trigger: TGTTCGCAGACAAACGCTTTGGGGAGTATAATAGCAACATAAGCCCAGAGGAAAAGATGATGAAGAGATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CAA 72 bp | GTCTGGTGTGCTGTCTGTAGCCAAATCTCCTATGTATaGCAAGAGGAAGCCAAACAATTTTTCCAATTTTGC | + |
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Preference number: 6 (lower is better) Translates to: VWCAVCSQISYV*QEEAKQFFQFC Trigger: GCAAAATTGGAAAAATTGTTTGGCTTCCTCTTGCAATACATAGGAGATTTGGCTACAGACAGCACACCAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CAA 90 bp | TTGCTATTATACTCCCCAAAGCGTTTGTCTGCGAACACATTGGACTaGTTCCTTTCTTTGTACTCCTTTAGTAAAGTTTGGGTTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LLLYSPKRLSANTLD*FLSLYSFSKVWVLF Trigger: GAAGAGAACCCAAACTTTACTAAAGGAGTACAAAGAAAGGAACAAGTCCAATGTGTTCGCAGACAAACGCTTTGGGGAGTATAATAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CAA 90 bp | CTTATGTTGCTATTATACTCCCCAAAGCGTTTGTCTGCGAACACATaGGACTTGTTCCTTTCTTTGTACTCCTTTAGTAAAGTTTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: LMLLLYSPKRLSANT*DLFLSLYSFSKVWV Trigger: AACCCAAACTTTACTAAAGGAGTACAAAGAAAGGAACAAGTCCAATGTGTTCGCAGACAAACGCTTTGGGGAGTATAATAGCAACATAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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| CDS CCA 72 bp | TATTATACTCCCCAAAGCGTTTGTCTGCGAACACATTaGACTTGTTCCTTTCTTTGTACTCCTTTAGTAAAG | + |
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Preference number: 6 (lower is better) Translates to: YYTPQSVCLRTH*TCSFLCTPLVK Trigger: CTTTACTAAAGGAGTACAAAGAAAGGAACAAGTCCAATGTGTTCGCAGACAAACGCTTTGGGGAGTATAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041364.13 |
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