Pregenerated sensors for NONO (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031311Ensembl transcript IDs: ENSMUST00000033673.7, ENSMUST00000147708.8
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGGGATGGGGCTAGGTCATTGGAGGATGTTTATGGTTTGTGGTATATATGGCAGGAGTTCATTTTCCCATaGTTCTCCAGGCCCTCAACA | + |
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Preference number: 2 (lower is better) Translates to: RDGARSLEDVYGLWYIWQEFIFP*FSRPST Trigger: TGTTGAGGGCCTGGAGAACCATGGGAAAATGAACTC...CTGCCATATATACCACAAACCATAAACATCCTCCAATGACCTAGCCCCATCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033673.7 |
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| 3UTR-3UTR TCA 90 bp | GGGGCTAGGTCATTGGAGGATGTTTATGGTTTGTGGTATATATGGCAGTGTCTCATATACCACAGACTTTaGCTTGTTGAATACCACCCC | + |
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Preference number: 2 (lower is better) Translates to: GARSLEDVYGLWYIWQCLIYHRL*LVEYHP Trigger: GGGGTGGTATTCAACAAGTCAAAGTCTGTGGTATAT...GAGACACTGCCATATATACCACAAACCATAAACATCCTCCAATGACCTAGCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033673.7 |
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| 3UTR-3UTR GCA 90 bp | AGGGATGGGGCTAGGTCATTGGAGGATGTTTATGGTTTGTGGTATATATGGCAGCCTTCTTTTAAGGGCTaGAGGAAACTAGACAATGCA | + |
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Preference number: 2 (lower is better) Translates to: RDGARSLEDVYGLWYIWQPSFKG*RKLDNA Trigger: TGCATTGTCTAGTTTCCTGCAGCCCTTAAAAGAAGG...CTGCCATATATACCACAAACCATAAACATCCTCCAATGACCTAGCCCCATCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033673.7 |
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| 3UTR-3UTR TCA 90 bp | AGGGATGGGGCTAGGTCATTGGAGGATGTTTATGGTTTGTGGTATATATGGCAGAGATTAATGGAGCTCTaGGTTCATTTTCCCATGGTT | + |
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Preference number: 2 (lower is better) Translates to: RDGARSLEDVYGLWYIWQRLMEL*VHFPMV Trigger: AACCATGGGAAAATGAACTCAGAGCTCCATTAATCT...CTGCCATATATACCACAAACCATAAACATCCTCCAATGACCTAGCCCCATCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033673.7 |
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| 3UTR-3UTR TCA 90 bp | GGGGCTAGGTCATTGGAGGATGTTTATGGTTTGTGGTATATATGGCAGTGTCTCAAGAGAGAGAAGGAATaGTCAAGATTAATGGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: GARSLEDVYGLWYIWQCLKREKE*SRLMEL Trigger: GAGCTCCATTAATCTTGATCATTCCTTCTCTCTCTT...GAGACACTGCCATATATACCACAAACCATAAACATCCTCCAATGACCTAGCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033673.7 |
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| 3UTR-3UTR CCA 90 bp | CAACCGTACGTATGCTGTAACCTCTGTGGACATTTGTCTGAATTCTTACCTGGGATTGGAGGATGTTTATaGTTTGTGGTATATATGGCA | + |
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Preference number: 2 (lower is better) Translates to: QPYVCCNLCGHLSEFLPGIGGCL*FVVYMA Trigger: TGCCATATATACCACAAACCATAAACATCCTCCAAT...CCCAGGTAAGAATTCAGACAAATGTCCACAGAGGTTACAGCATACGTACGGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033673.7 |
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| 3UTR-3UTR CAA 90 bp | TTATGGTTTGTGGTATATATGGCAGTGTCTCAGGGGTTGAGGGGAATAAAGATGGGGAAGGCCTATCTATaGGGAAGAACCCCTAACACT | + |
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Preference number: 3 (lower is better) Translates to: LWFVVYMAVSQGLRGIKMGKAYL*GRTPNT Trigger: AGTGTTAGGGGTTCTTCCCAATAGATAGGCCTTCCC...CATCTTTATTCCCCTCAACCCCTGAGACACTGCCATATATACCACAAACCATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000033673.7 |
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| 3UTR-3UTR CAA 90 bp | TTATGGTTTGTGGTATATATGGCAGTGTCTCAGGGGTTGAGGGGAATAAAGATGACCACAGACTTTGACTaGTTGAATACCACCCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: LWFVVYMAVSQGLRGIKMTTDFD*LNTTPP Trigger: GGGAGGGGTGGTATTCAACAAGTCAAAGTCTGTGGT...CATCTTTATTCCCCTCAACCCCTGAGACACTGCCATATATACCACAAACCATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033673.7 |
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| CDS-3UTR GCA 90 bp | TTATGGTTTGTGGTATATATGGCAGTGTCTCAGGGGTTGAGGGGAATAAAGATGGGCCTGCTGGCCATTTaGAGGTATTGGTGGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LWFVVYMAVSQGLRGIKMGLLAI*RYWWGW Trigger: CCACCCCCACCAATACCTGCAAATGGCCAGCAGGCC...CATCTTTATTCCCCTCAACCCCTGAGACACTGCCATATATACCACAAACCATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033673.7 |
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| CDS-3UTR CCA 90 bp | CAACCGTACGTATGCTGTAACCTCTGTGGACATTTGTCTGAATTCTTACCTGGGTCGGCGGCGTTTATTTaGAGCAAATTCAGCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: QPYVCCNLCGHLSEFLPGSAAFI*SKFSSR Trigger: CCGGGAGCTGAATTTGCTCCAAATAAACGCCGCCGA...CCCAGGTAAGAATTCAGACAAATGTCCACAGAGGTTACAGCATACGTACGGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033673.7 |
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| CDS-3UTR TCA 90 bp | AGGGATGGGGCTAGGTCATTGGAGGATGTTTATGGTTTGTGGTATATATGGCAGATGTTCCGATCCACTTaGTCCTGCTGTTGCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: RDGARSLEDVYGLWYIWQMFRST*SCCCFS Trigger: GGAGAAGCAACAGCAGGATCAAGTGGATCGGAACAT...CTGCCATATATACCACAAACCATAAACATCCTCCAATGACCTAGCCCCATCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033673.7 |
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| CDS-3UTR GCA 90 bp | GGGGCTAGGTCATTGGAGGATGTTTATGGTTTGTGGTATATATGGCAGTGTCTCTATCAGGGGGAAGATTaGCCACAAAGAGACGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: GARSLEDVYGLWYIWQCLYQGED*PQRDGY Trigger: GTAGCCGTCTCTTTGTGGGCAATCTTCCCCCTGATA...GAGACACTGCCATATATACCACAAACCATAAACATCCTCCAATGACCTAGCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033673.7 |
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| CDS-3UTR GCA 90 bp | AGGGATGGGGCTAGGTCATTGGAGGATGTTTATGGTTTGTGGTATATATGGCAGCTGCGTTCCTCTTCCTaGCTGAGTTCTAACTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: RDGARSLEDVYGLWYIWQLRSSS*LSSNCF Trigger: AAAGCAGTTAGAACTCAGGCAGGAAGAGGAACGCAG...CTGCCATATATACCACAAACCATAAACATCCTCCAATGACCTAGCCCCATCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033673.7 |
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| CDS-3UTR TCA 90 bp | TTATGGTTTGTGGTATATATGGCAGTGTCTCAGGGGTTGAGGGGAATAAAGATGGTTCCTCTTCCTGCCTaGGTTCTAACTGCTTTCGCT | + |
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Preference number: 4 (lower is better) Translates to: LWFVVYMAVSQGLRGIKMVPLPA*VLTAFA Trigger: AGCGAAAGCAGTTAGAACTCAGGCAGGAAGAGGAAC...CATCTTTATTCCCCTCAACCCCTGAGACACTGCCATATATACCACAAACCATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033673.7 |
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| CDS-3UTR CCA 90 bp | TTATGGTTTGTGGTATATATGGCAGTGTCTCAGGGGTTGAGGGGAATAAAGATGACGTTCAGTTGTTGGTaGGGTCAATCCAAGGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LWFVVYMAVSQGLRGIKMTFSCW*GQSKGS Trigger: GGAACCCTTGGATTGACCCCACCAACAACTGAACGT...CATCTTTATTCCCCTCAACCCCTGAGACACTGCCATATATACCACAAACCATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033673.7 |
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| CDS-3UTR CCA 90 bp | AGGGATGGGGCTAGGTCATTGGAGGATGTTTATGGTTTGTGGTATATATGGCAGCTGATGATGCTTCCTTaGAGTATGATTCTGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: RDGARSLEDVYGLWYIWQLMMLP*SMILLL Trigger: GAGAAGCAGAATCATACTCCAAGGAAGCATCATCAG...CTGCCATATATACCACAAACCATAAACATCCTCCAATGACCTAGCCCCATCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033673.7 |
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| CDS-3UTR CCA 90 bp | TTATGGTTTGTGGTATATATGGCAGTGTCTCAGGGGTTGAGGGGAATAAAGATGTTGTGCAAATCTGGGTaGCTGTTCTCTCTCCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: LWFVVYMAVSQGLRGIKMLCKSG*LFSLLV Trigger: CACAAGGAGAGAGAACAGCCACCCAGATTTGCACAA...CATCTTTATTCCCCTCAACCCCTGAGACACTGCCATATATACCACAAACCATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033673.7 |
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| CDS-3UTR CCA 90 bp | GGGGCTAGGTCATTGGAGGATGTTTATGGTTTGTGGTATATATGGCAGTGTCTCTATAACCAGTTTCTCTaGAAGTCCCTCTTCATCATC | + |
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Preference number: 4 (lower is better) Translates to: GARSLEDVYGLWYIWQCLYNQFL*KSLFII Trigger: GATGATGAAGAGGGACTTCCAGAGAAACTGGTTATA...GAGACACTGCCATATATACCACAAACCATAAACATCCTCCAATGACCTAGCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033673.7 |
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| CDS CCA 90 bp | CAAGCCTTCATTCTGGCTGCTGGCCTGCTGGCCATTTGCAGGTATTaGTGGGGGTGGCTGTTGCTGCTGCTGCTGCTGTTGCTGCTGATG | + |
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Preference number: 5 (lower is better) Translates to: QAFILAAGLLAICRY*WGWLLLLLLLLLLM Trigger: CATCAGCAGCAACAGCAGCAGCAGCAGCAACAGCCACCCCCACCAATACCTGCAAATGGCCAGCAGGCCAGCAGCCAGAATGAAGGCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033673.7 ENSMUST00000147708.8 |
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| CDS GCA 90 bp | GTCAATAGTCAAGCCTTCATTCTGGCTGCTGGCCTGCTGGCCATTTaGAGGTATTGGTGGGGGTGGCTGTTGCTGCTGCTGCTGCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: VNSQAFILAAGLLAI*RYWWGWLLLLLLLL Trigger: CAACAGCAGCAGCAGCAGCAACAGCCACCCCCACCAATACCTGCAAATGGCCAGCAGGCCAGCAGCCAGAATGAAGGCTTGACTATTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033673.7 ENSMUST00000147708.8 |
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| CDS-3UTR CAA 90 bp | AGGGATGGGGCTAGGTCATTGGAGGATGTTTATGGTTTGTGGTATATATGGCAGGGCCATTTGCAGGTATaGGTGGGGGTGGCTGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: RDGARSLEDVYGLWYIWQGHLQV*VGVAVA Trigger: AGCAACAGCCACCCCCACCAATACCTGCAAATGGCC...CTGCCATATATACCACAAACCATAAACATCCTCCAATGACCTAGCCCCATCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033673.7 |
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| CDS-3UTR CAA 90 bp | TTATGGTTTGTGGTATATATGGCAGTGTCTCAGGGGTTGAGGGGAATAAAGATGTGGCCTGCTGGCCATTaGCAGGTATTGGTGGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: LWFVVYMAVSQGLRGIKMWPAGH*QVLVGV Trigger: CACCCCCACCAATACCTGCAAATGGCCAGCAGGCCA...CATCTTTATTCCCCTCAACCCCTGAGACACTGCCATATATACCACAAACCATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033673.7 |
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| CDS-3UTR CAA 90 bp | AGGGATGGGGCTAGGTCATTGGAGGATGTTTATGGTTTGTGGTATATATGGCAGGCCCATCCGTATCTCTaGTTCTCTCGCATCAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: RDGARSLEDVYGLWYIWQAHPYL*FSRIRE Trigger: TTCCCTGATGCGAGAGAACAAGAGATACGGATGGGC...CTGCCATATATACCACAAACCATAAACATCCTCCAATGACCTAGCCCCATCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033673.7 |
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| CDS-3UTR CAA 90 bp | AGGGATGGGGCTAGGTCATTGGAGGATGTTTATGGTTTGTGGTATATATGGCAGATCGGCGGCGTTTATTaGGAGCAAATTCAGCTCCCG | + |
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Preference number: 5 (lower is better) Translates to: RDGARSLEDVYGLWYIWQIGGVY*EQIQLP Trigger: CGGGAGCTGAATTTGCTCCAAATAAACGCCGCCGAT...CTGCCATATATACCACAAACCATAAACATCCTCCAATGACCTAGCCCCATCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033673.7 |
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| CDS CAA 90 bp | TCAAGCCTTCATTCTGGCTGCTGGCCTGCTGGCCATTTGCAGGTATaGGTGGGGGTGGCTGTTGCTGCTGCTGCTGCTGTTGCTGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: SSLHSGCWPAGHLQV*VGVAVAAAAAVAAD Trigger: ATCAGCAGCAACAGCAGCAGCAGCAGCAACAGCCACCCCCACCAATACCTGCAAATGGCCAGCAGGCCAGCAGCCAGAATGAAGGCTTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033673.7 ENSMUST00000147708.8 |
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| CDS CAA 72 bp | TATTGGTGGGGGTGGCTGTTGCTGCTGCTGCTGCTGTaGCTGCTGATGGTGCTGCTGGTGGTGATGCTGATG | + |
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Preference number: 6 (lower is better) Translates to: YWWGWLLLLLLL*LLMVLLVVMLM Trigger: CATCAGCATCACCACCAGCAGCACCATCAGCAGCAACAGCAGCAGCAGCAGCAACAGCCACCCCCACCAATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033673.7 ENSMUST00000147708.8 |
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| CDS CAA 90 bp | ATTTGCAGGTATTGGTGGGGGTGGCTGTTGCTGCTGCTGCTGCTGTaGCTGCTGATGGTGCTGCTGGTGGTGATGCTGATGATGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: ICRYWWGWLLLLLLL*LLMVLLVVMLMMLP Trigger: AGGAAGCATCATCAGCATCACCACCAGCAGCACCATCAGCAGCAACAGCAGCAGCAGCAGCAACAGCCACCCCCACCAATACCTGCAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033673.7 ENSMUST00000147708.8 |
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