RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NOLC1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000015176

Ensembl transcript IDs: ENSMUST00000165017.2, ENSMUST00000223683.2, ENSMUST00000223728.2, ENSMUST00000223741.2, ENSMUST00000224490.2, ENSMUST00000225780.2, ENSMUST00000235620.2

Found 473 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGAGCCCTCCTGCCTCCTTGGGCTGTCTCCTGCTGCTGCTCCAGGTaGCCAGGAGATCCAGTGTATCTACTTCACACCAGGGTTCATAGG +
Preference number: 1 (lower is better)
Translates to: RALLPPWAVSCCCSR*PGDPVYLLHTRVHR
Trigger: CCTATGAACCCTGGTGTGAAGTAGATACACTGGATCTCCTGGGCACCTGGAGCAGCAGCAGGAGACAGCCCAAGGAGGCAGGAGGGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR GCA 90 bp TGCTTAGTTAGAGCCCTCCTGCCTCCTTGGGCTGTCTCCTGCTGCTaGTCCAGGTGCCCAGGAGATCCAGTGTATCTACTTCACACCAGG +
Preference number: 1 (lower is better)
Translates to: CLVRALLPPWAVSCC*SRCPGDPVYLLHTR
Trigger: CCTGGTGTGAAGTAGATACACTGGATCTCCTGGGCACCTGGAGCAGCAGCAGGAGACAGCCCAAGGAGGCAGGAGGGCTCTAACTAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR GCA 90 bp TCCTGCTTAGTTAGAGCCCTCCTGCCTCCTTGGGCTGTCTCCTGCTaGTGCTCCAGGTGCCCAGGAGATCCAGTGTATCTACTTCACACC +
Preference number: 1 (lower is better)
Translates to: SCLVRALLPPWAVSC*CSRCPGDPVYLLHT
Trigger: GGTGTGAAGTAGATACACTGGATCTCCTGGGCACCTGGAGCAGCAGCAGGAGACAGCCCAAGGAGGCAGGAGGGCTCTAACTAAGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR GCA 90 bp TGGTCCTGCTTAGTTAGAGCCCTCCTGCCTCCTTGGGCTGTCTCCTaGTGCTGCTCCAGGTGCCCAGGAGATCCAGTGTATCTACTTCAC +
Preference number: 1 (lower is better)
Translates to: WSCLVRALLPPWAVS*CCSRCPGDPVYLLH
Trigger: GTGAAGTAGATACACTGGATCTCCTGGGCACCTGGAGCAGCAGCAGGAGACAGCCCAAGGAGGCAGGAGGGCTCTAACTAAGCAGGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR CCA 90 bp ACTTCACCTTTGGGGCTTTGGTGGACCTGCTTTAATCCCAGCACTTaGAAGGCAGAGGCAGAGGCAGGCGGATTTCTGAGTTCAAGGCCA +
Preference number: 1 (lower is better)
Translates to: TSPLGLWWTCFNPST*KAEAEAGGFLSSRP
Trigger: TGGCCTTGAACTCAGAAATCCGCCTGCCTCTGCCTCTGCCTTCCAAGTGCTGGGATTAAAGCAGGTCCACCAAAGCCCCAAAGGTGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224490.2
3UTR TCA 90 bp AAATCCTTTTTGTCCTTGATATTCAGCTGTCCAGAAAAAGGAGCCTaGGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCG +
Preference number: 1 (lower is better)
Translates to: KSFLSLIFSCPEKGA*EDCRLTHLRTCSTP
Trigger: CGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCTGGACAGCTGAATATCAAGGACAAAAAGGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
3UTR CCA 90 bp CACCAAGAATGGCAATTTTATCCCCCAAAGTTGGTAGATCCACGCTaGCTTCTAGAAGCTTTGGTGCCGGGCCCAATGGATGAAGATGAG +
Preference number: 1 (lower is better)
Translates to: HQEWQFYPPKLVDPR*LLEALVPGPMDEDE
Trigger: CTCATCTTCATCCATTGGGCCCGGCACCAAAGCTTCTAGAAGCCAGCGTGGATCTACCAACTTTGGGGGATAAAATTGCCATTCTTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR GCA 90 bp GAAGCTTTGGTGCCGGGCCCAATGGATGAAGATGAGCACAGAGTATaGTTAGCAGACAATCATCACAAGACTTATGTCATTGCCCACCAG +
Preference number: 1 (lower is better)
Translates to: EALVPGPMDEDEHRV*LADNHHKTYVIAHQ
Trigger: CTGGTGGGCAATGACATAAGTCTTGTGATGATTGTCTGCTAAGCATACTCTGTGCTCATCTTCATCCATTGGGCCCGGCACCAAAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR CCA 90 bp ACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACTGCACCAAGAATaGCAATTTTATCCCCCAAAGTTGGTAGATCCACGCTGGCTTCTA +
Preference number: 1 (lower is better)
Translates to: TRESCLPISRLLHQE*QFYPPKLVDPRWLL
Trigger: TAGAAGCCAGCGTGGATCTACCAACTTTGGGGGATAAAATTGCCATTCTTGGTGCAGTAACCTACTAATTGGCAGGCAGGATTCTCGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR CCA 90 bp ATGCTAAGCAAGCACACTACCACCCAGCTATGCCTCCCTGCCTCCTaGCTAGTCTGTATCAGTAACATTATAGGTAAGGTACTAATAGTG +
Preference number: 1 (lower is better)
Translates to: MLSKHTTTQLCLPAS*LVCISNIIGKVLIV
Trigger: CACTATTAGTACCTTACCTATAATGTTACTGATACAGACTAGCCAGGAGGCAGGGAGGCATAGCTGGGTGGTAGTGTGCTTGCTTAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR GCA 90 bp AAACAAAGACAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTaGCAATTAGTAGGTTACTGCACCAAGAATGGCAATTTTATCCCC +
Preference number: 1 (lower is better)
Translates to: KQRQLHGIHTLENPA*QLVGYCTKNGNFIP
Trigger: GGGGATAAAATTGCCATTCTTGGTGCAGTAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTGTCTTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR GCA 90 bp GCACAGAGTATGCTTAGCAGACAATCATCACAAGACTTATGTCATTaGCCACCAGGGCTTTCACATAAAGAGAATCCTCCAGTAGGGAAA +
Preference number: 1 (lower is better)
Translates to: AQSMLSRQSSQDLCH*PPGLSHKENPPVGK
Trigger: TTTCCCTACTGGAGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTGTGATGATTGTCTGCTAAGCATACTCTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR CCA 90 bp CATGTAGCAGTAACAGCTACCAAGAACAAAACAAAGACAGCTGCATaGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTA +
Preference number: 1 (lower is better)
Translates to: HVAVTATKNKTKTAA*HSHTRESCLPISRL
Trigger: TAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTGTCTTTGTTTTGTTCTTGGTAGCTGTTACTGCTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR-3UTR CCA 90 bp TGCTCTCTGAAGCTTTGGCTGCTGCCTTTCCAGCATGCTGAGGCACACTGGCTCCGGCAGCCTTCTGTGTaGGAAGTCCCTGGGCTTTTT +
Preference number: 2 (lower is better)
Translates to: CSLKLWLLPFQHAEAHWLRQPSV*EVPGLF
Trigger: AAAAAGCCCAGGGACTTCCCACACAGAAGGCTGCCG...GAGCCAGTGTGCCTCAGCATGCTGGAAAGGCAGCAGCCAAAGCTTCAGAGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224490.2
3UTR-3UTR GCA 90 bp AAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCTCCACTGGAGTTGAGTaGCAGTCTCCCAAAATCACC +
Preference number: 2 (lower is better)
Translates to: KRSLRGLQADTPQDLLHTSTGVE*QSPKIT
Trigger: GGTGATTTTGGGAGACTGGCACTCAACTCCAGTGGA...GGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
3UTR-3UTR GCA 90 bp TACCAGGTGAGCGTGGACACCAAACAGGGGAGGCAATGCCCGGTATCCGTTTCTGCCCAGGAATCTCTCTaGTCTTTACTTCCTGCGGTG +
Preference number: 2 (lower is better)
Translates to: YQVSVDTKQGRQCPVSVSAQESL*SLLPAV
Trigger: CACCGCAGGAAGTAAAGAGCAGAGAGATTCCTGGGC...AGAAACGGATACCGGGCATTGCCTCCCCTGTTTGGTGTCCACGCTCACCTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR-3UTR TCA 90 bp GTAACTTCACCTTTGGGGCTTTGGTGGACCTGCTTTAATCCCAGCACTTGGAAGGCCAGACTGGTCTACTaGGTTCCAGGACAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: VTSPLGLWWTCFNPSTWKARLVY*VPGQPG
Trigger: CCCTGGCTGTCCTGGAACTCAGTAGACCAGTCTGGC...CTTCCAAGTGCTGGGATTAAAGCAGGTCCACCAAAGCCCCAAAGGTGAAGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224490.2
3UTR-3UTR GCA 90 bp TTTATAATCCACTCCCTTGGCCCAGGAATCTCTCTGCTCTTTACTTCCTGCGGTGCTGTCTCCTGCTGCTaGTCCAGGTGCCCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: FIIHSLGPGISLLFTSCGAVSCC*SRCPGD
Trigger: ATCTCCTGGGCACCTGGAGCAGCAGCAGGAGACAGC...ACCGCAGGAAGTAAAGAGCAGAGAGATTCCTGGGCCAAGGGAGTGGATTATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR-3UTR GCA 90 bp AATGGTCACATCCTACAGCTTTATAATCCACTCCCTTGGCCCAGGAATCTCTCTCCTTGGGCTGTCTCCTaGTGCTGCTCCAGGTGCCCA +
Preference number: 2 (lower is better)
Translates to: NGHILQLYNPLPWPRNLSPWAVS*CCSRCP
Trigger: TGGGCACCTGGAGCAGCAGCAGGAGACAGCCCAAGG...AGAGAGATTCCTGGGCCAAGGGAGTGGATTATAAAGCTGTAGGATGTGACCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR-3UTR CCA 90 bp ATGCTAAGCAAGCACACTACCACCCAGCTATGCCTCCCTGCCTCCTGGCTAGTCACAAAGACAGCTGCATaGCATTCACACACTCGAGAA +
Preference number: 2 (lower is better)
Translates to: MLSKHTTTQLCLPASWLVTKTAA*HSHTRE
Trigger: TTCTCGAGTGTGTGAATGCCATGCAGCTGTCTTTGT...GACTAGCCAGGAGGCAGGGAGGCATAGCTGGGTGGTAGTGTGCTTGCTTAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR-3UTR TCA 90 bp AAGACACAGAACTTTGACCATGCAGCCTTCCACAAGGAGCTGCCACAGCTTTTACCAGAAAAAGGAGCCTaGGAGGACTGCAGGCTGACA +
Preference number: 2 (lower is better)
Translates to: KTQNFDHAAFHKELPQLLPEKGA*EDCRLT
Trigger: TGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCTGG...TAAAAGCTGTGGCAGCTCCTTGTGGAAGGCTGCATGGTCAAAGTTCTGTGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR-3UTR GCA 90 bp AAGCACACTACCACCCAGCTATGCCTCCCTGCCTCCTGGCTAGTCTGTATCAGTCAAGACTTATGTCATTaGCCACCAGGGCTTTCACAT +
Preference number: 2 (lower is better)
Translates to: KHTTTQLCLPASWLVCISQDLCH*PPGLSH
Trigger: ATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTG...ACTGATACAGACTAGCCAGGAGGCAGGGAGGCATAGCTGGGTGGTAGTGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR-3UTR TCA 90 bp AATGGTCACATCCTACAGCTTTATAATCCACTCCCTTGGCCCAGGAATCTCTCTCCAGAAAAAGGAGCCTaGGAGGACTGCAGGCTGACA +
Preference number: 2 (lower is better)
Translates to: NGHILQLYNPLPWPRNLSPEKGA*EDCRLT
Trigger: TGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCTGG...AGAGAGATTCCTGGGCCAAGGGAGTGGATTATAAAGCTGTAGGATGTGACCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR-3UTR GCA 90 bp AAGACACAGAACTTTGACCATGCAGCCTTCCACAAGGAGCTGCCACAGCTTTTAAAACAGGGGAGGCAATaGCCGGTATCCGTTTCTCAC +
Preference number: 2 (lower is better)
Translates to: KTQNFDHAAFHKELPQLLKQGRQ*PVSVSH
Trigger: GTGAGAAACGGATACCGGGCATTGCCTCCCCTGTTT...TAAAAGCTGTGGCAGCTCCTTGTGGAAGGCTGCATGGTCAAAGTTCTGTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR-3UTR CCA 90 bp ATGCTAAGCAAGCACACTACCACCCAGCTATGCCTCCCTGCCTCCTGGCTAGTCTTACTGCACCAAGAATaGCAATTTTATCCCCCAAAG +
Preference number: 2 (lower is better)
Translates to: MLSKHTTTQLCLPASWLVLLHQE*QFYPPK
Trigger: CTTTGGGGGATAAAATTGCCATTCTTGGTGCAGTAA...GACTAGCCAGGAGGCAGGGAGGCATAGCTGGGTGGTAGTGTGCTTGCTTAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR-3UTR GCA 90 bp CACTCCCTTGGCCCAGGAATCTCTCTGCTCTTTACTTCCTGCGGTGATAGAGATCACACTCGAGAATCCTaGCTGCCAATTAGTAGGTTA +
Preference number: 2 (lower is better)
Translates to: HSLGPGISLLFTSCGDRDHTRES*LPISRL
Trigger: TAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTG...ATCTCTATCACCGCAGGAAGTAAAGAGCAGAGAGATTCCTGGGCCAAGGGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR-3UTR GCA 90 bp GGCCCAATGGATGAAGATGAGCACAGAGTATGCTTAGCAGACAATCATCACAAGTCCACTGGAGTTGAGTaGCAGTCTCCCAAAATCACC +
Preference number: 2 (lower is better)
Translates to: GPMDEDEHRVCLADNHHKSTGVE*QSPKIT
Trigger: GGTGATTTTGGGAGACTGGCACTCAACTCCAGTGGA...CTTGTGATGATTGTCTGCTAAGCATACTCTGTGCTCATCTTCATCCATTGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR-3UTR GCA 90 bp CACAAGACTTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTCCAGTCCACTGGAGTTGAGTaGCAGTCTCCCAAAATCACC +
Preference number: 2 (lower is better)
Translates to: HKTYVIAHQGFHIKRILQSTGVE*QSPKIT
Trigger: GGTGATTTTGGGAGACTGGCACTCAACTCCAGTGGA...CTGGAGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR-3UTR GCA 90 bp TTACTGCACCAAGAATGGCAATTTTATCCCCCAAAGTTGGTAGATCCACGCTGGTCCACTGGAGTTGAGTaGCAGTCTCCCAAAATCACC +
Preference number: 2 (lower is better)
Translates to: LLHQEWQFYPPKLVDPRWSTGVE*QSPKIT
Trigger: GGTGATTTTGGGAGACTGGCACTCAACTCCAGTGGA...CCAGCGTGGATCTACCAACTTTGGGGGATAAAATTGCCATTCTTGGTGCAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR-3UTR TCA 90 bp CAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACACAAATCTCTCAGTATaGAGACCCACAGAACAGGAA +
Preference number: 2 (lower is better)
Translates to: QLHGIHTLENPACQLVGYTNLSV*RPTEQE
Trigger: TTCCTGTTCTGTGGGTCTTCATACTGAGAGATTTGT...GTAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR-3UTR GCA 90 bp ACTGCACCAAGAATGGCAATTTTATCCCCCAAAGTTGGTAGATCCACGCTGGCTGATGAGCACAGAGTATaGTTAGCAGACAATCATCAC +
Preference number: 2 (lower is better)
Translates to: TAPRMAILSPKVGRSTLADEHRV*LADNHH
Trigger: GTGATGATTGTCTGCTAAGCATACTCTGTGCTCATC...AGCCAGCGTGGATCTACCAACTTTGGGGGATAAAATTGCCATTCTTGGTGCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR-3UTR TCA 90 bp TTTATAATCCACTCCCTTGGCCCAGGAATCTCTCTGCTCTTTACTTCCTGCGGTAATCCTTTTTGTCCTTaGTATTCAGCTGTCCAGAAA +
Preference number: 2 (lower is better)
Translates to: FIIHSLGPGISLLFTSCGNPFCP*YSAVQK
Trigger: TTTCTGGACAGCTGAATATCAAGGACAAAAAGGATT...ACCGCAGGAAGTAAAGAGCAGAGAGATTCCTGGGCCAAGGGAGTGGATTATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR-3UTR GCA 90 bp TCATCACAAGACTTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTTACCATGTGTTGTTTTaGTTTGCCTTAGGCAACAGC +
Preference number: 2 (lower is better)
Translates to: SSQDLCHCPPGLSHKENPYHVLF*FALGNS
Trigger: GCTGTTGCCTAAGGCAAAGCAAAACAACACATGGTA...AGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTGTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR-3UTR GCA 90 bp AAGACACAGAACTTTGACCATGCAGCCTTCCACAAGGAGCTGCCACAGCTTTTACAATTAGTAGGTTACTaGACCAAGAATGGCAATTTT +
Preference number: 2 (lower is better)
Translates to: KTQNFDHAAFHKELPQLLQLVGY*TKNGNF
Trigger: AAAATTGCCATTCTTGGTGCAGTAACCTACTAATTG...TAAAAGCTGTGGCAGCTCCTTGTGGAAGGCTGCATGGTCAAAGTTCTGTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR CAA 90 bp TCCTTGACCAGTGACTCAACCATGCAGGTACTTACCAGCCTGTCCTaGATGTTAATAAGAATCAAATACATCCATGAACTTGTCAATATA +
Preference number: 2 (lower is better)
Translates to: SLTSDSTMQVLTSLS*MLIRIKYIHELVNI
Trigger: TATATTGACAAGTTCATGGATGTATTTGATTCTTATTAACATCAAGGACAGGCTGGTAAGTACCTGCATGGTTGAGTCACTGGTCAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR-3UTR TCA 90 bp GGAAAATTATTACCATGTGTTGTTTTGCTTTGCCTTAGGCAACAGCTAAGACTTACAAATCTCTCAGTATaGAGACCCACAGAACAGGAA +
Preference number: 2 (lower is better)
Translates to: GKLLPCVVLLCLRQQLRLTNLSV*RPTEQE
Trigger: TTCCTGTTCTGTGGGTCTTCATACTGAGAGATTTGT...AAGTCTTAGCTGTTGCCTAAGGCAAAGCAAAACAACACATGGTAATAATTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR TCA 72 bp CTCTCTGAAGCTTTGGCTGCTGCCTTTCCAGCATGCTaGGGCACACTGGCTCGCTTGACCTGTGCGGCAGCC +
Preference number: 3 (lower is better)
Translates to: LSEALAAAFPAC*GTLARLTCAAA
Trigger: GGCTGCCGCACAGGTCAAGCGAGCCAGTGTGCCTCAGCATGCTGGAAAGGCAGCAGCCAAAGCTTCAGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224490.2
3UTR GCA 72 bp TACCAGGTGAGCGTGGACACCAAACAGGGGAGGCAATaGCCGGTATCCGTTTCTCACCAGGCCAGCCACGTC +
Preference number: 3 (lower is better)
Translates to: YQVSVDTKQGRQ*PVSVSHQASHV
Trigger: GACGTGGCTGGCCTGGTGAGAAACGGATACCGGGCATTGCCTCCCCTGTTTGGTGTCCACGCTCACCTGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR GCA 72 bp TATCCGTTTCTCACCAGGCCAGCCACGTCCCACCCCTaGCCTCACTGCCAATGGTCACATCCTACAGCTTTA +
Preference number: 3 (lower is better)
Translates to: YPFLTRPATSHP*PHCQWSHPTAL
Trigger: TAAAGCTGTAGGATGTGACCATTGGCAGTGAGGGCAGGGGTGGGACGTGGCTGGCCTGGTGAGAAACGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR TCA 72 bp TTGTCCTTGATATTCAGCTGTCCAGAAAAAGGAGCCTaGGAGGACTGCAGGCTGACACACCTCAGGACCTGC +
Preference number: 3 (lower is better)
Translates to: LSLIFSCPEKGA*EDCRLTHLRTC
Trigger: GCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCTGGACAGCTGAATATCAAGGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
3UTR-3UTR CAA 90 bp CAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACTGGCTTCTAGAAGCTTaGGTGCCGGGCCCAATGGAT +
Preference number: 3 (lower is better)
Translates to: QLHGIHTLENPACQLVGYWLLEA*VPGPMD
Trigger: ATCCATTGGGCCCGGCACCAAAGCTTCTAGAAGCCA...GTAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR-3UTR CAA 90 bp TGCTCTCTGAAGCTTTGGCTGCTGCCTTTCCAGCATGCTGAGGCACACTGGCTCTGGTCACTGGTCCATTaGACTGTAACTTCACCTTTG +
Preference number: 3 (lower is better)
Translates to: CSLKLWLLPFQHAEAHWLWSLVH*TVTSPL
Trigger: CAAAGGTGAAGTTACAGTCAAATGGACCAGTGACCA...GAGCCAGTGTGCCTCAGCATGCTGGAAAGGCAGCAGCCAAAGCTTCAGAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224490.2
3UTR GCA 72 bp TTACTCCTGTGTACCGACTTCAAGACAAAATGGTCCTaGTTAGTTAGAGCCCTCCTGCCTCCTTGGGCTGTC +
Preference number: 3 (lower is better)
Translates to: LLLCTDFKTKWS*LVRALLPPWAV
Trigger: GACAGCCCAAGGAGGCAGGAGGGCTCTAACTAAGCAGGACCATTTTGTCTTGAAGTCGGTACACAGGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR CCA 72 bp TGGCAATTTTATCCCCCAAAGTTGGTAGATCCACGCTaGCTTCTAGAAGCTTTGGTGCCGGGCCCAATGGAT +
Preference number: 3 (lower is better)
Translates to: WQFYPPKLVDPR*LLEALVPGPMD
Trigger: ATCCATTGGGCCCGGCACCAAAGCTTCTAGAAGCCAGCGTGGATCTACCAACTTTGGGGGATAAAATTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR-3UTR CAA 90 bp CCAGCCACGTCCCACCCCTGCCCTCACTGCCAATGGTCACATCCTACAGCTTTAACAACAGTCAAGTTGTaGCAAAATGTCTGTCAGAAA +
Preference number: 3 (lower is better)
Translates to: PATSHPCPHCQWSHPTALTTVKL*QNVCQK
Trigger: TTTCTGACAGACATTTTGCAACAACTTGACTGTTGT...TAAAGCTGTAGGATGTGACCATTGGCAGTGAGGGCAGGGGTGGGACGTGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR TCA 72 bp CTTCACACCAGGGTTCATAGGTCATCTCCATTTCCTTaGCCAGTGACTCAACCATGCAGGTACTTACCAGCC +
Preference number: 3 (lower is better)
Translates to: LHTRVHRSSPFP*PVTQPCRYLPA
Trigger: GGCTGGTAAGTACCTGCATGGTTGAGTCACTGGTCAAGGAAATGGAGATGACCTATGAACCCTGGTGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR GCA 72 bp CAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTaGCAATTAGTAGGTTACTGCACCAAGAATGGCAAT +
Preference number: 3 (lower is better)
Translates to: QLHGIHTLENPA*QLVGYCTKNGN
Trigger: ATTGCCATTCTTGGTGCAGTAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR GCA 72 bp AGCAGTAACAGCTACCAAGAACAAAACAAAGACAGCTaGATGGCATTCACACACTCGAGAATCCTGCCTGCC +
Preference number: 3 (lower is better)
Translates to: SSNSYQEQNKDS*MAFTHSRILPA
Trigger: GGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTGTCTTTGTTTTGTTCTTGGTAGCTGTTACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR CCA 72 bp AAGCACACTACCACCCAGCTATGCCTCCCTGCCTCCTaGCTAGTCTGTATCAGTAACATTATAGGTAAGGTA +
Preference number: 3 (lower is better)
Translates to: KHTTTQLCLPAS*LVCISNIIGKV
Trigger: TACCTTACCTATAATGTTACTGATACAGACTAGCCAGGAGGCAGGGAGGCATAGCTGGGTGGTAGTGTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR-3UTR CAA 90 bp AGCCACGTCCCACCCCTGCCCTCACTGCCAATGGTCACATCCTACAGCTTTATAAATTATTACCATGTGTaGTTTTGCTTTGCCTTAGGC +
Preference number: 3 (lower is better)
Translates to: SHVPPLPSLPMVTSYSFINYYHV*FCFALG
Trigger: GCCTAAGGCAAAGCAAAACAACACATGGTAATAATT...TATAAAGCTGTAGGATGTGACCATTGGCAGTGAGGGCAGGGGTGGGACGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR CCA 72 bp TCCTGCCTGCCAATTAGTAGGTTACTGCACCAAGAATaGCAATTTTATCCCCCAAAGTTGGTAGATCCACGC +
Preference number: 3 (lower is better)
Translates to: SCLPISRLLHQE*QFYPPKLVDPR
Trigger: GCGTGGATCTACCAACTTTGGGGGATAAAATTGCCATTCTTGGTGCAGTAACCTACTAATTGGCAGGCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR-3UTR CAA 90 bp ACAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTATTACCATGTGTTGTTTaGCTTTGCCTTAGGCAACAG +
Preference number: 3 (lower is better)
Translates to: TAAWHSHTRESCLPISRLLPCVV*LCLRQQ
Trigger: CTGTTGCCTAAGGCAAAGCAAAACAACACATGGTAA...TAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR GCA 72 bp GTGCCGGGCCCAATGGATGAAGATGAGCACAGAGTATaGTTAGCAGACAATCATCACAAGACTTATGTCATT +
Preference number: 3 (lower is better)
Translates to: VPGPMDEDEHRV*LADNHHKTYVI
Trigger: AATGACATAAGTCTTGTGATGATTGTCTGCTAAGCATACTCTGTGCTCATCTTCATCCATTGGGCCCGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR GCA 72 bp ACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACTaGACCAAGAATGGCAATTTTATCCCCCAAAGTTGG +
Preference number: 3 (lower is better)
Translates to: TLENPACQLVGY*TKNGNFIPQSW
Trigger: CCAACTTTGGGGGATAAAATTGCCATTCTTGGTGCAGTAACCTACTAATTGGCAGGCAGGATTCTCGAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR CCA 72 bp GTAACAGCTACCAAGAACAAAACAAAGACAGCTGCATaGCATTCACACACTCGAGAATCCTGCCTGCCAATT +
Preference number: 3 (lower is better)
Translates to: VTATKNKTKTAA*HSHTRESCLPI
Trigger: AATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTGTCTTTGTTTTGTTCTTGGTAGCTGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR-3UTR CAA 90 bp CACAAGACTTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTCCAGAGAACAGGAAGGCAATaGACAACTGAATGGGTTTCT +
Preference number: 3 (lower is better)
Translates to: HKTYVIAHQGFHIKRILQRTGRQ*TTEWVS
Trigger: AGAAACCCATTCAGTTGTCAATTGCCTTCCTGTTCT...CTGGAGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR-3UTR CAA 90 bp AGCAGTAACAGCTACCAAGAACAAAACAAAGACAGCTGCATGGCATTCACACACAGAACAGGAAGGCAATaGACAACTGAATGGGTTTCT +
Preference number: 3 (lower is better)
Translates to: SSNSYQEQNKDSCMAFTHRTGRQ*TTEWVS
Trigger: AGAAACCCATTCAGTTGTCAATTGCCTTCCTGTTCT...GTGTGTGAATGCCATGCAGCTGTCTTTGTTTTGTTCTTGGTAGCTGTTACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR-3UTR CAA 90 bp TTTATAATCCACTCCCTTGGCCCAGGAATCTCTCTGCTCTTTACTTCCTGCGGTTATACAACAGTCAAGTaGTTGCAAAATGTCTGTCAG +
Preference number: 3 (lower is better)
Translates to: FIIHSLGPGISLLFTSCGYTTVK*LQNVCQ
Trigger: CTGACAGACATTTTGCAACAACTTGACTGTTGTATA...ACCGCAGGAAGTAAAGAGCAGAGAGATTCCTGGGCCAAGGGAGTGGATTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR GCA 72 bp ATGCTTAGCAGACAATCATCACAAGACTTATGTCATTaGCCACCAGGGCTTTCACATAAAGAGAATCCTCCA +
Preference number: 3 (lower is better)
Translates to: MLSRQSSQDLCH*PPGLSHKENPP
Trigger: TGGAGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTGTGATGATTGTCTGCTAAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp AGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTGCTGGAGCTCTTCTaGGTGGGGGCGGCAGCTACT +
Preference number: 4 (lower is better)
Translates to: RSLRGLQADTPQDLLHTVLLELF*VGAAAT
Trigger: AGTAGCTGCCGCCCCCACCCAGAAGAGCTCCAGCAG...GACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp CACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGCTGTCCCCAGCAGCCTaGGGGGCCTGTTTGGCGGGT +
Preference number: 4 (lower is better)
Translates to: HLRTCSTPSLSQLSPNTELSPAA*GACLAG
Trigger: ACCCGCCAAACAGGCCCCTCAGGCTGCTGGGGACAG...CTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTCTGTCCCCAGCAGCCTaGGGGGCCTGTTTGGCGGGT +
Preference number: 4 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPLSPAA*GACLAG
Trigger: ACCCGCCAAACAGGCCCCTCAGGCTGCTGGGGACAG...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp AGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCGCTGCTCTTGGCCTCTaGTTTCTTCCCAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RSLRGLQADTPQDLLHTVAALGL*FLPRGW
Trigger: CCAGCCCCTGGGAAGAAAGCAGAGGCCAAGAGCAGC...GACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp AAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGCACACTGGCTCGCTTaGCCTGTGCGGCAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: KRSLRGLQADTPQDLLHTAHWLA*PVRQPS
Trigger: AGAAGGCTGCCGCACAGGTCAAGCGAGCCAGTGTGC...GGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp GCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCACCTGTCCCCAGCAGCCTaGGGGGCCTGTTTGGCGGGT +
Preference number: 4 (lower is better)
Translates to: APHRPCHNCLLTRSFWVHLSPAA*GACLAG
Trigger: ACCCGCCAAACAGGCCCCTCAGGCTGCTGGGGACAG...GTGGACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp CCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCTGTCCCCAGCAGCCTaGGGGGCCTGTTTGGCGGGT +
Preference number: 4 (lower is better)
Translates to: PAPHRPCHNCLLTRSFWVLSPAA*GACLAG
Trigger: ACCCGCCAAACAGGCCCCTCAGGCTGCTGGGGACAG...GACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp CCTGCTGCTGCTCCAGGTGCCCAGGAGATCCAGTGTATCTACTTCACACCAGGGGAGGCATTGGCGTCCTaGTGTGTAGCGCCGGTCGCT +
Preference number: 4 (lower is better)
Translates to: PAAAPGAQEIQCIYFTPGEALAS*CVAPVA
Trigger: AGCGACCGGCGCTACACAGCAGGACGCCAATGCCTC...CCCTGGTGTGAAGTAGATACACTGGATCTCCTGGGCACCTGGAGCAGCAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR GCA 90 bp AGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCAACGGCTCCACCTGCTaGCTTCTTCTTAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RSLRGLQADTPQDLLHTVNGSTC*LLLSWG
Trigger: CCCCCAGCTAAGAAGAAGGCAGCAGGTGGAGCCGTT...GACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp CCAGCCACGTCCCACCCCTGCCCTCACTGCCAATGGTCACATCCTACAGCTTTAGGGGATAAAGGTCGCTaGGAACCACGCGGCGCAAGC +
Preference number: 4 (lower is better)
Translates to: PATSHPCPHCQWSHPTALGDKGR*EPRGAS
Trigger: GCTTGCGCCGCGTGGTTCCCAGCGACCTTTATCCCC...TAAAGCTGTAGGATGTGACCATTGGCAGTGAGGGCAGGGGTGGGACGTGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CCA 90 bp GGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTCTGCTGGAGCTCTTCTaGGTGGGGGCGGCAGCTACT +
Preference number: 4 (lower is better)
Translates to: GLQADTPQDLLHTVLVTTLLELF*VGAAAT
Trigger: AGTAGCTGCCGCCCCCACCCAGAAGAGCTCCAGCAG...AGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTGCACACTGGCTCGCTTaGCCTGTGCGGCAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPAHWLA*PVRQPS
Trigger: AGAAGGCTGCCGCACAGGTCAAGCGAGCCAGTGTGC...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp AGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCACTGCTGGAACTATCTaGGTCAGAGCTGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: RSLRGLQADTPQDLLHTVTAGTI*VRAAVP
Trigger: GGGGACAGCAGCTCTGACTCAGATAGTTCCAGCAGT...GACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp CACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGGAGGCATTGGCGTCCTaGTGTGTAGCGCCGGTCGCT +
Preference number: 4 (lower is better)
Translates to: HLRTCSTPSLSQLSPNTEEALAS*CVAPVA
Trigger: AGCGACCGGCGCTACACAGCAGGACGCCAATGCCTC...CTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACGAGGCATTGGCGTCCTaGTGTGTAGCGCCGGTCGCT +
Preference number: 4 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHEALAS*CVAPVA
Trigger: AGCGACCGGCGCTACACAGCAGGACGCCAATGCCTC...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTGGCTCGCTTGACCTGTaGGGCAGCCTTCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPGSLDL*GSLLCG
Trigger: CCCACACAGAAGGCTGCCGCACAGGTCAAGCGAGCC...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACGGCTCGCTTGACCTGTaGGGCAGCCTTCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHGSLDL*GSLLCG
Trigger: CCCACACAGAAGGCTGCCGCACAGGTCAAGCGAGCC...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp CCAGCCACGTCCCACCCCTGCCCTCACTGCCAATGGTCACATCCTACAGCTTTACGCAGGAGGTCTGACTaGCTTGGCTTGGGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: PATSHPCPHCQWSHPTALRRRSD*LGLGLS
Trigger: GCTAAGCCCCAAGCCAAGGCAGTCAGACCTCCTGCG...TAAAGCTGTAGGATGTGACCATTGGCAGTGAGGGCAGGGGTGGGACGTGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR GCA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTCCTCCTCGCTGGAGCTaGTTTCCTCCTCGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPPPRWS*FPPRWS
Trigger: GCTCCAGCGAGGAGGAAAGCAGCTCCAGCGAGGAGG...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACCCTCCTCGCTGGAGCTaGTTTCCTCCTCGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHPPRWS*FPPRWS
Trigger: GCTCCAGCGAGGAGGAAAGCAGCTCCAGCGAGGAGG...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp AGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCTATCTGAGTCAGAGCTaGTGTCCCCAGCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RSLRGLQADTPQDLLHTVYLSQS*CPQQPE
Trigger: CTCAGGCTGCTGGGGACAGCAGCTCTGACTCAGATA...GACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTGGGGATAAAGGTCGCTaGGAACCACGCGGCGCAAGC +
Preference number: 4 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPGDKGR*EPRGAS
Trigger: GCTTGCGCCGCGTGGTTCCCAGCGACCTTTATCCCC...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp AGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCTGCCACAGCTGCCTTTaGCTTCTGGGTCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: RSLRGLQADTPQDLLHTVCHSCL*LLGLWC
Trigger: ACACCACAGACCCAGAAGCCAAAGGCAGCTGTGGCA...GACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp CACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGCTGCTGGAGCTCTTCTaGGTGGGGGCGGCAGCTACT +
Preference number: 4 (lower is better)
Translates to: HLRTCSTPSLSQLSPNTELLELF*VGAAAT
Trigger: AGTAGCTGCCGCCCCCACCCAGAAGAGCTCCAGCAG...CTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp CCTGCTGCTGCTCCAGGTGCCCAGGAGATCCAGTGTATCTACTTCACACCAGGGCGCAGCAGCTTTCTTTaGAGCCTGGGTTCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: PAAAPGAQEIQCIYFTPGRSSFL*SLGSRG
Trigger: TCCCCGGGAACCCAGGCTCCAAAGAAAGCTGCTGCG...CCCTGGTGTGAAGTAGATACACTGGATCTCCTGGGCACCTGGAGCAGCAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CCA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACCCTCCTCCTCCTCGCTaGAGCTGCTTTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHPPPPR*SCFPPR
Trigger: GCGAGGAGGAAAGCAGCTCCAGCGAGGAGGAGGAGG...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp AAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCCAGATGGCTTCGGAGTaGCAGCTGGCTTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: KRSLRGLQADTPQDLLHTQMASE*QLAWDS
Trigger: AGAGTCCCAAGCCAGCTGTCACTCCGAAGCCATCTG...GGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp CACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGCGCAGGAGGTCTGACTaGCTTGGCTTGGGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: HLRTCSTPSLSQLSPNTERRRSD*LGLGLS
Trigger: GCTAAGCCCCAAGCCAAGGCAGTCAGACCTCCTGCG...CTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp AGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCTGGAAGAATCCTCACTaGTGGAGCTCTTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: RSLRGLQADTPQDLLHTVWKNPH*WSSSGW
Trigger: CCACCCAGAAGAGCTCCAGCAGTGAGGATTCTTCCA...GACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp AGCCACGTCCCACCCCTGCCCTCACTGCCAATGGTCACATCCTACAGCTTTATACCTCCTCGCTGGAGCTaGTTTCCTCCTCGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SHVPPLPSLPMVTSYSFIPPRWS*FPPRWS
Trigger: GCTCCAGCGAGGAGGAAAGCAGCTCCAGCGAGGAGG...TATAAAGCTGTAGGATGTGACCATTGGCAGTGAGGGCAGGGGTGGGACGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CCA 90 bp GCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCACGGGGATAAAGGTCGCTaGGAACCACGCGGCGCAAGC +
Preference number: 4 (lower is better)
Translates to: APHRPCHNCLLTRSFWVHGDKGR*EPRGAS
Trigger: GCTTGCGCCGCGTGGTTCCCAGCGACCTTTATCCCC...GTGGACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp AAGCACACTACCACCCAGCTATGCCTCCCTGCCTCCTGGCTAGTCTGTATCAGTGGGGATAAAGGTCGCTaGGAACCACGCGGCGCAAGC +
Preference number: 4 (lower is better)
Translates to: KHTTTQLCLPASWLVCISGDKGR*EPRGAS
Trigger: GCTTGCGCCGCGTGGTTCCCAGCGACCTTTATCCCC...ACTGATACAGACTAGCCAGGAGGCAGGGAGGCATAGCTGGGTGGTAGTGTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CCA 90 bp GGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTCTGACTGCCTTGGCTTaGGGCTTAGCTGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GLQADTPQDLLHTVLVTTLTALA*GLAAFC
Trigger: GCAGAAGGCAGCTAAGCCCCAAGCCAAGGCAGTCAG...AGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp AGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCGCTGCCTTTGGCTTCTaGGTCTGTGGTGTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RSLRGLQADTPQDLLHTVAAFGF*VCGVSS
Trigger: GGAAGAAACACCACAGACCCAGAAGCCAAAGGCAGC...GACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACCGCAGCAGCTTTCTTTaGAGCCTGGGTTCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHRSSFL*SLGSRG
Trigger: TCCCCGGGAACCCAGGCTCCAAAGAAAGCTGCTGCG...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTCGCAGCAGCTTTCTTTaGAGCCTGGGTTCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPRSSFL*SLGSRG
Trigger: TCCCCGGGAACCCAGGCTCCAAAGAAAGCTGCTGCG...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp GCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCACCCTCCTCCTCCTCGCTaGAGCTGCTTTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: APHRPCHNCLLTRSFWVHPPPPR*SCFPPR
Trigger: GCGAGGAGGAAAGCAGCTCCAGCGAGGAGGAGGAGG...GTGGACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp GGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGCCTCCTCCTCCTCGCTaGAGCTGCTTTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: GPAPHRPCHNCLLTRSFWPPPPR*SCFPPR
Trigger: GCGAGGAGGAAAGCAGCTCCAGCGAGGAGGAGGAGG...CCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp ACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTGCACACTGGCTCGCTTaGCCTGTGCGGCAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: TCSTPSLSQLSPNTEFLGAHWLA*PVRQPS
Trigger: AGAAGGCTGCCGCACAGGTCAAGCGAGCCAGTGTGC...ACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACCAGATGGCTTCGGAGTaGCAGCTGGCTTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHQMASE*QLAWDS
Trigger: AGAGTCCCAAGCCAGCTGTCACTCCGAAGCCATCTG...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp GGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTACTGCTGGAACTATCTaGGTCAGAGCTGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: GLQADTPQDLLHTVLVTTTAGTI*VRAAVP
Trigger: GGGGACAGCAGCTCTGACTCAGATAGTTCCAGCAGT...AGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp CCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCGCAGGAGGTCTGACTaGCTTGGCTTGGGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: PAPHRPCHNCLLTRSFWVRRRSD*LGLGLS
Trigger: GCTAAGCCCCAAGCCAAGGCAGTCAGACCTCCTGCG...GACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp GGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGCGCAGGAGGTCTGACTaGCTTGGCTTGGGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: GPAPHRPCHNCLLTRSFWRRRSD*LGLGLS
Trigger: GCTAAGCCCCAAGCCAAGGCAGTCAGACCTCCTGCG...CCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp GCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCACGTCGTCACTGCTGTCTaGAGGCTGTGTCTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: APHRPCHNCLLTRSFWVHVVTAV*RLCLRS
Trigger: GCTGCGCAGACACAGCCTGCAGACAGCAGTGACGAC...GTGGACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp ACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCTCCTCGCTGGAGCTaGTTTCCTCCTCGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TCSTPSLSQLSPNTEFLGPPRWS*FPPRWS
Trigger: GCTCCAGCGAGGAGGAAAGCAGCTCCAGCGAGGAGG...ACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp AAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCTATCTGAGTCAGAGCTaGTGTCCCCAGCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: KRSLRGLQADTPQDLLHTYLSQS*CPQQPE
Trigger: CTCAGGCTGCTGGGGACAGCAGCTCTGACTCAGATA...GGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACGGCTCCACCTGCTaGCTTCTTCTTAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPNGSTC*LLLSWG
Trigger: CCCCCAGCTAAGAAGAAGGCAGCAGGTGGAGCCGTT...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp AAGCACACTACCACCCAGCTATGCCTCCCTGCCTCCTGGCTAGTCTGTATCAGTGCTGCTCTTGGCCTCTaGTTTCTTCCCAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KHTTTQLCLPASWLVCISAALGL*FLPRGW
Trigger: CCAGCCCCTGGGAAGAAAGCAGAGGCCAAGAGCAGC...ACTGATACAGACTAGCCAGGAGGCAGGGAGGCATAGCTGGGTGGTAGTGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR GCA 90 bp GGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGCTGCTCTTGGCCTCTaGTTTCTTCCCAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GPAPHRPCHNCLLTRSFWAALGL*FLPRGW
Trigger: CCAGCCCCTGGGAAGAAAGCAGAGGCCAAGAGCAGC...CCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp AAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCAGCCTCCCCGGTAGCTaGCTCGCTTCTTCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: KRSLRGLQADTPQDLLHTSLPGS*LASSSF
Trigger: AAACGAAGAAGAAGCGAGGCAGCTACCGGGGAGGCT...GGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTCTGACTGCCTTGGCTTaGGGCTTAGCTGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPLTALA*GLAAFC
Trigger: GCAGAAGGCAGCTAAGCCCCAAGCCAAGGCAGTCAG...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp AAGCACACTACCACCCAGCTATGCCTCCCTGCCTCCTGGCTAGTCTGTATCAGTTGCTGCTGCTGCTGCTaGCGGCTGCTTTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: KHTTTQLCLPASWLVCISCCCCC*RLLCHW
Trigger: CCAATGGCAAAGCAGCCGCCAGCAGCAGCAGCAGCA...ACTGATACAGACTAGCCAGGAGGCAGGGAGGCATAGCTGGGTGGTAGTGTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CCA 90 bp CCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCTGCTGCTGCTGCTGCTaGCGGCTGCTTTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: PAPHRPCHNCLLTRSFWVCCCCC*RLLCHW
Trigger: CCAATGGCAAAGCAGCCGCCAGCAGCAGCAGCAGCA...GACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp GGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGTGCTGCTGCTGCTGCTaGCGGCTGCTTTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: GPAPHRPCHNCLLTRSFWCCCCC*RLLCHW
Trigger: CCAATGGCAAAGCAGCCGCCAGCAGCAGCAGCAGCA...CCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTGGCAGCTACTTTCACTaGGGCCTTGGCCACGACTTG +
Preference number: 4 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPGSYFH*GLGHDL
Trigger: CAAGTCGTGGCCAAGGCCCCAGTGAAAGTAGCTGCC...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp ATGCTAAGCAAGCACACTACCACCCAGCTATGCCTCCCTGCCTCCTGGCTAGTCGGCAGCTACTTTCACTaGGGCCTTGGCCACGACTTG +
Preference number: 4 (lower is better)
Translates to: MLSKHTTTQLCLPASWLVGSYFH*GLGHDL
Trigger: CAAGTCGTGGCCAAGGCCCCAGTGAAAGTAGCTGCC...GACTAGCCAGGAGGCAGGGAGGCATAGCTGGGTGGTAGTGTGCTTGCTTAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CCA 90 bp GGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTTGCTGCTGCTGCTCTTaGCCTCTGCTTTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: GLQADTPQDLLHTVLVTTCCCCS*PLLSSQ
Trigger: CTGGGAAGAAAGCAGAGGCCAAGAGCAGCAGCAGCA...AGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp AAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCTGCTGCTGCTGCTCTTaGCCTCTGCTTTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: KRSLRGLQADTPQDLLHTCCCCS*PLLSSQ
Trigger: CTGGGAAGAAAGCAGAGGCCAAGAGCAGCAGCAGCA...GGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp AAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCCTTCTTCTCTTCCTCTaGGTCATCGCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: KRSLRGLQADTPQDLLHTLLLFL*VIAAAA
Trigger: AGCAGCAGCAGCGATGACTCAGAGGAAGAGAAGAAG...GGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp GGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTCTTCTTCTCTTCCTCTaGGTCATCGCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GLQADTPQDLLHTVLVTTLLLFL*VIAAAA
Trigger: AGCAGCAGCAGCGATGACTCAGAGGAAGAGAAGAAG...AGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp GGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTTCAGCCTTCCTGCTCTaGGGTTTCTGGTTACTGCCT +
Preference number: 4 (lower is better)
Translates to: GLQADTPQDLLHTVLVTTSAFLL*GFWLLP
Trigger: AGGCAGTAACCAGAAACCTCAGAGCAGGAAGGCTGA...AGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp AAGACACAGAACTTTGACCATGCAGCCTTCCACAAGGAGCTGCCACAGCTTTTACTGTCCCCAGCAGCCTaGGGGGCCTGTTTGGCGGGT +
Preference number: 4 (lower is better)
Translates to: KTQNFDHAAFHKELPQLLLSPAA*GACLAG
Trigger: ACCCGCCAAACAGGCCCCTCAGGCTGCTGGGGACAG...TAAAAGCTGTGGCAGCTCCTTGTGGAAGGCTGCATGGTCAAAGTTCTGTGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR GCA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACTGTCCTCGTCCTCACTaGTGTCCTCACTGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHCPRPH*CPHCCH
Trigger: GTGACAGCAGTGAGGACAGCAGTGAGGACGAGGACA...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTTATCTGAGTCAGAGCTaGTGTCCCCAGCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPYLSQS*CPQQPE
Trigger: CTCAGGCTGCTGGGGACAGCAGCTCTGACTCAGATA...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp AGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCTCTCCTCCTCTTCACTaGTGGAACTATCTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: RSLRGLQADTPQDLLHTVSPPLH*WNYLSQ
Trigger: CTGACTCAGATAGTTCCAGCAGTGAAGAGGAGGAGA...GACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp GGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTAGAAACGGCTCCACCTaGTGCCTTCTTCTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: GLQADTPQDLLHTVLVTTRNGST*CLLLSW
Trigger: CCAGCTAAGAAGAAGGCAGCAGGTGGAGCCGTTTCT...AGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp AGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCGCCATTGGCCTTGCTTaGCTGTATTTTAGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: RSLRGLQADTPQDLLHTVAIGLA*LYFRGS
Trigger: ACTACCCCTAAAATACAGGCAAGCAAGGCCAATGGC...GACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACAGCCTCCCCGGTAGCTaGCTCGCTTCTTCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHSLPGS*LASSSF
Trigger: AAACGAAGAAGAAGCGAGGCAGCTACCGGGGAGGCT...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTCGGCAGCCTTCTGTGTaGGAAGTCCCTGGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPRQPSV*EVPGLF
Trigger: AAAAAGCCCAGGGACTTCCCACACAGAAGGCTGCCG...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp CACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGCGGCAGCCTTCTGTGTaGGAAGTCCCTGGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: HLRTCSTPSLSQLSPNTERQPSV*EVPGLF
Trigger: AAAAAGCCCAGGGACTTCCCACACAGAAGGCTGCCG...CTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp GGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGCTGCCTTTGGCTTCTaGGTCTGTGGTGTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: GLQADTPQDLLHTVLVTTAAFGF*VCGVSS
Trigger: GGAAGAAACACCACAGACCCAGAAGCCAAAGGCAGC...AGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp CACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTGCCACAGCTGCCTTTaGCTTCTGGGTCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: HLRTCSTPSLSQLSPNTECHSCL*LLGLWC
Trigger: ACACCACAGACCCAGAAGCCAAAGGCAGCTGTGGCA...CTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp GCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCACGGCAGCTACTTTCACTaGGGCCTTGGCCACGACTTG +
Preference number: 4 (lower is better)
Translates to: APHRPCHNCLLTRSFWVHGSYFH*GLGHDL
Trigger: CAAGTCGTGGCCAAGGCCCCAGTGAAAGTAGCTGCC...GTGGACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp CCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCGGCAGCTACTTTCACTaGGGCCTTGGCCACGACTTG +
Preference number: 4 (lower is better)
Translates to: PAPHRPCHNCLLTRSFWVGSYFH*GLGHDL
Trigger: CAAGTCGTGGCCAAGGCCCCAGTGAAAGTAGCTGCC...GACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp AAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCCCTCCTCCTCTTCACTaGAAGAATCCTCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: KRSLRGLQADTPQDLLHTPPPLH*KNPHCW
Trigger: CCAGCAGTGAGGATTCTTCCAGTGAAGAGGAGGAGG...GGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp GGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTCCTCCTCCTCTTCACTaGAAGAATCCTCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: GLQADTPQDLLHTVLVTTPPPLH*KNPHCW
Trigger: CCAGCAGTGAGGATTCTTCCAGTGAAGAGGAGGAGG...AGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp CACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTGTGGCACTTTTCTTaGAGGCCTCCTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: HLRTCSTPSLSQLSPNTELWHFS*RPPPPR
Trigger: GCGAGGAGGAGGAGGCCTCCAAGAAAAGTGCCACAA...CTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACTTGTGGCACTTTTCTTaGAGGCCTCCTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHLWHFS*RPPPPR
Trigger: GCGAGGAGGAGGAGGCCTCCAAGAAAAGTGCCACAA...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACTTTCTTCCCAGGGGCTaGTGTAGAAACGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHFLPRG*CRNGST
Trigger: GGTGGAGCCGTTTCTACACCAGCCCCTGGGAAGAAA...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTTGCTGCTGCTGCTCTTaGCCTCTGCTTTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPCCCCS*PLLSSQ
Trigger: CTGGGAAGAAAGCAGAGGCCAAGAGCAGCAGCAGCA...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACTGGTGTTTCTTCCTCTaGGCTGGAGTCCGAATCCGA +
Preference number: 4 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHWCFFL*AGVRIR
Trigger: TCGGATTCGGACTCCAGCTCAGAGGAAGAAACACCA...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp CACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGGCTTCGGCTTTAGTCTaGGCTTTTGCTGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: HLRTCSTPSLSQLSPNTEASALV*AFAATA
Trigger: AGCTGTGGCAGCAAAAGCTCAGACTAAAGCCGAAGC...CTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp CACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGCTTCTTCTCTTCCTCTaGGTCATCGCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: HLRTCSTPSLSQLSPNTELLLFL*VIAAAA
Trigger: AGCAGCAGCAGCGATGACTCAGAGGAAGAGAAGAAG...CTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp AGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTCTTCCTCAGAACTTaGATCAGAATCGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: RSLRGLQADTPQDLLHTVLFLRT*IRIVTA
Trigger: AGCAGTGACGATTCTGATTCAAGTTCTGAGGAAGAG...GACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp CCTGCTGCTGCTCCAGGTGCCCAGGAGATCCAGTGTATCTACTTCACACCAGGGGGGCTTTGGTGGACTTaGGCCAGAAGCTATAGATGT +
Preference number: 4 (lower is better)
Translates to: PAAAPGAQEIQCIYFTPGGLWWT*ARSYRC
Trigger: ACATCTATAGCTTCTGGCTCAAGTCCACCAAAGCCC...CCCTGGTGTGAAGTAGATACACTGGATCTCCTGGGCACCTGGAGCAGCAGCAGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000223728.2
CDS-3UTR GCA 90 bp AGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCATTCTTCACTACTGCTaGTCTCTGAAGCTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: RSLRGLQADTPQDLLHTVILHYC*SLKLWL
Trigger: CAGCCAAAGCTTCAGAGAGCAGCAGTAGTGAAGAAT...GACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp AGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCTGGATTCTTCACTACTaGTGCTCTCTGAAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: RSLRGLQADTPQDLLHTVWILHY*CSLKLW
Trigger: CCAAAGCTTCAGAGAGCAGCAGTAGTGAAGAATCCA...GACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACTTTTGCTGCCACAGCTaGCTTTGGCTTCTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHFCCHS*LWLLGL
Trigger: CAGACCCAGAAGCCAAAGGCAGCTGTGGCAGCAAAA...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp AAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCAGTCTGAGCTTTTGCTaGCACAGCTGCCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: KRSLRGLQADTPQDLLHTSLSFC*HSCLWL
Trigger: AAGCCAAAGGCAGCTGTGGCAGCAAAAGCTCAGACT...GGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp GGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTAGTCTGAGCTTTTGCTaGCACAGCTGCCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: GLQADTPQDLLHTVLVTTSLSFC*HSCLWL
Trigger: AAGCCAAAGGCAGCTGTGGCAGCAAAAGCTCAGACT...AGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp CCTGCTGCTGCTCCAGGTGCCCAGGAGATCCAGTGTATCTACTTCACACCAGGGAGTCTTCTTGGGAGGTaGAGCTGCCTTCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: PAAAPGAQEIQCIYFTPGSLLGR*SCLLLF
Trigger: GAAGAGAAGAAGGCAGCTGCACCTCCCAAGAAGACT...CCCTGGTGTGAAGTAGATACACTGGATCTCCTGGGCACCTGGAGCAGCAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR GCA 90 bp AAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCTTACTGCCTGCAGGTTaGTTAGGAGTTGTCACTGCC +
Preference number: 4 (lower is better)
Translates to: KRSLRGLQADTPQDLLHTLLPAG*LGVVTA
Trigger: GGCAGTGACAACTCCTAAGCAACCTGCAGGCAGTAA...GGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp AAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCTGCTGTCAGCCTTCCTaGTCTGAGGTTTCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: KRSLRGLQADTPQDLLHTCCQPS*SEVSGY
Trigger: GTAACCAGAAACCTCAGAGCAGGAAGGCTGACAGCA...GGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp CCAGCCACGTCCCACCCCTGCCCTCACTGCCAATGGTCACATCCTACAGCTTTATGCTGTCAGCCTTCCTaGTCTGAGGTTTCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: PATSHPCPHCQWSHPTALCCQPS*SEVSGY
Trigger: GTAACCAGAAACCTCAGAGCAGGAAGGCTGACAGCA...TAAAGCTGTAGGATGTGACCATTGGCAGTGAGGGCAGGGGTGGGACGTGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR GCA 90 bp AGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCAGCTTGAGGAGTTGTTaGTTCATCTGCGGTCTCATT +
Preference number: 4 (lower is better)
Translates to: RSLRGLQADTPQDLLHTVSLRSC*FICGLI
Trigger: AATGAGACCGCAGATGAAGCAACAACTCCTCAAGCT...GACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp CAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACGGGGATAAAGGTCGCTaGGAACCACGCGGCGCAAGC +
Preference number: 4 (lower is better)
Translates to: QLHGIHTLENPACQLVGYGDKGR*EPRGAS
Trigger: GCTTGCGCCGCGTGGTTCCCAGCGACCTTTATCCCC...GTAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp CAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACCTGCTGGAGCTCTTCTaGGTGGGGGCGGCAGCTACT +
Preference number: 4 (lower is better)
Translates to: QLHGIHTLENPACQLVGYLLELF*VGAAAT
Trigger: AGTAGCTGCCGCCCCCACCCAGAAGAGCTCCAGCAG...GTAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTGCTTTCTTTGGAGCCTaGGTTCCCGGGGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPAFFGA*VPGDFF
Trigger: AAAGAAGTCCCCGGGAACCCAGGCTCCAAAGAAAGC...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp CACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGGCTTTCTTTGGAGCCTaGGTTCCCGGGGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: HLRTCSTPSLSQLSPNTEAFFGA*VPGDFF
Trigger: AAAGAAGTCCCCGGGAACCCAGGCTCCAAAGAAAGC...CTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp CACTCCCTTGGCCCAGGAATCTCTCTGCTCTTTACTTCCTGCGGTGATAGAGATCGCAGCAGCTTTCTTTaGAGCCTGGGTTCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: HSLGPGISLLFTSCGDRDRSSFL*SLGSRG
Trigger: TCCCCGGGAACCCAGGCTCCAAAGAAAGCTGCTGCG...ATCTCTATCACCGCAGGAAGTAAAGAGCAGAGAGATTCCTGGGCCAAGGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CCA 90 bp AAGCACACTACCACCCAGCTATGCCTCCCTGCCTCCTGGCTAGTCTGTATCAGTTTGTGGCACTTTTCTTaGAGGCCTCCTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: KHTTTQLCLPASWLVCISLWHFS*RPPPPR
Trigger: GCGAGGAGGAGGAGGCCTCCAAGAAAAGTGCCACAA...ACTGATACAGACTAGCCAGGAGGCAGGGAGGCATAGCTGGGTGGTAGTGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CCA 90 bp GGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGTTGTGGCACTTTTCTTaGAGGCCTCCTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: GPAPHRPCHNCLLTRSFWLWHFS*RPPPPR
Trigger: GCGAGGAGGAGGAGGCCTCCAAGAAAAGTGCCACAA...CCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp GGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTCCTCCTCTTCACTGCTaGAACTATCTGAGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: GLQADTPQDLLHTVLVTTPPLHC*NYLSQS
Trigger: GCTCTGACTCAGATAGTTCCAGCAGTGAAGAGGAGG...AGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp CCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCTTTCTTCCCAGGGGCTaGTGTAGAAACGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: PAPHRPCHNCLLTRSFWVFLPRG*CRNGST
Trigger: GGTGGAGCCGTTTCTACACCAGCCCCTGGGAAGAAA...GACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp CCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCTGCTGCTGCTGCTCTTaGCCTCTGCTTTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PAPHRPCHNCLLTRSFWVCCCCS*PLLSSQ
Trigger: CTGGGAAGAAAGCAGAGGCCAAGAGCAGCAGCAGCA...GACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp GGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTTCCATTCAGAGAAGCTaGAGTGCCATTGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: GLQADTPQDLLHTVLVTTSIQRS*SAIGLA
Trigger: AGCAAGGCCAATGGCACTCCAGCTTCTCTGAATGGA...AGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp TACCAGGTGAGCGTGGACACCAAACAGGGGAGGCAATGCCCGGTATCCGTTTCTTGCCTGAACCTGGCTTaGTCCCAGCTGCCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: YQVSVDTKQGRQCPVSVSCLNLA*SQLPFS
Trigger: AGAAAAAGGCAGCTGGGACCAAGCCAGGTTCAGGCA...AGAAACGGATACCGGGCATTGCCTCCCCTGTTTGGTGTCCACGCTCACCTGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
3UTR CAA 72 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTaGTCACAACTGTCTCCTAACACGGAGTTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: RLTHLRTCSTPS*SQLSPNTEFLG
Trigger: ACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp GGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGTGGTGTTTCTTCCTCTaGGCTGGAGTCCGAATCCGA +
Preference number: 4 (lower is better)
Translates to: GPAPHRPCHNCLLTRSFWWCFFL*AGVRIR
Trigger: TCGGATTCGGACTCCAGCTCAGAGGAAGAAACACCA...CCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp GCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCACGCTTCGGCTTTAGTCTaGGCTTTTGCTGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: APHRPCHNCLLTRSFWVHASALV*AFAATA
Trigger: AGCTGTGGCAGCAAAAGCTCAGACTAAAGCCGAAGC...GTGGACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp GGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGCTTCTTCTCTTCCTCTaGGTCATCGCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GPAPHRPCHNCLLTRSFWLLLFL*VIAAAA
Trigger: AGCAGCAGCAGCGATGACTCAGAGGAAGAGAAGAAG...CCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp CACTCCCTTGGCCCAGGAATCTCTCTGCTCTTTACTTCCTGCGGTGATAGAGATCAGATGGCTTCGGAGTaGCAGCTGGCTTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: HSLGPGISLLFTSCGDRDQMASE*QLAWDS
Trigger: AGAGTCCCAAGCCAGCTGTCACTCCGAAGCCATCTG...ATCTCTATCACCGCAGGAAGTAAAGAGCAGAGAGATTCCTGGGCCAAGGGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR TCA 90 bp GGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGTCAGCCTTCCTGCTCTaGGGTTTCTGGTTACTGCCT +
Preference number: 4 (lower is better)
Translates to: GPAPHRPCHNCLLTRSFWSAFLL*GFWLLP
Trigger: AGGCAGTAACCAGAAACCTCAGAGCAGGAAGGCTGA...CCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp GCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCACTCAGCCTTCCTGCTCTaGGGTTTCTGGTTACTGCCT +
Preference number: 4 (lower is better)
Translates to: APHRPCHNCLLTRSFWVHSAFLL*GFWLLP
Trigger: AGGCAGTAACCAGAAACCTCAGAGCAGGAAGGCTGA...GTGGACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp ATGCTAAGCAAGCACACTACCACCCAGCTATGCCTCCCTGCCTCCTGGCTAGTCAGTCTTCTTGGGAGGTaGAGCTGCCTTCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: MLSKHTTTQLCLPASWLVSLLGR*SCLLLF
Trigger: GAAGAGAAGAAGGCAGCTGCACCTCCCAAGAAGACT...GACTAGCCAGGAGGCAGGGAGGCATAGCTGGGTGGTAGTGTGCTTGCTTAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR GCA 90 bp GGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGTGGAAGAATCCTCACTaGTGGAGCTCTTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GPAPHRPCHNCLLTRSFWWKNPH*WSSSGW
Trigger: CCACCCAGAAGAGCTCCAGCAGTGAGGATTCTTCCA...CCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp CCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCTGGAAGAATCCTCACTaGTGGAGCTCTTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PAPHRPCHNCLLTRSFWVWKNPH*WSSSGW
Trigger: CCACCCAGAAGAGCTCCAGCAGTGAGGATTCTTCCA...GACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp GCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACTGCACGTCGTCACTGCTGTCTaGAGGCTGTGTCTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: AWHSHTRESCLPISRLLHVVTAV*RLCLRS
Trigger: GCTGCGCAGACACAGCCTGCAGACAGCAGTGACGAC...GTGCAGTAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp CACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTACTGCCTGCAGGTTaGTTAGGAGTTGTCACTGCC +
Preference number: 4 (lower is better)
Translates to: HLRTCSTPSLSQLSPNTELLPAG*LGVVTA
Trigger: GGCAGTGACAACTCCTAAGCAACCTGCAGGCAGTAA...CTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACTGCTGTCAGCCTTCCTaGTCTGAGGTTTCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHCCQPS*SEVSGY
Trigger: GTAACCAGAAACCTCAGAGCAGGAAGGCTGACAGCA...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp GGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGAGAAACGGCTCCACCTaGTGCCTTCTTCTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: GPAPHRPCHNCLLTRSFWRNGST*CLLLSW
Trigger: CCAGCTAAGAAGAAGGCAGCAGGTGGAGCCGTTTCT...CCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp CCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCAGAAACGGCTCCACCTaGTGCCTTCTTCTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: PAPHRPCHNCLLTRSFWVRNGST*CLLLSW
Trigger: CCAGCTAAGAAGAAGGCAGCAGGTGGAGCCGTTTCT...GACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp GCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCACAGAAACGGCTCCACCTaGTGCCTTCTTCTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: APHRPCHNCLLTRSFWVHRNGST*CLLLSW
Trigger: CCAGCTAAGAAGAAGGCAGCAGGTGGAGCCGTTTCT...GTGGACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp GCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACTGCACGCTGCTCTTGGCCTCTaGTTTCTTCCCAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AWHSHTRESCLPISRLLHAALGL*FLPRGW
Trigger: CCAGCCCCTGGGAAGAAAGCAGAGGCCAAGAGCAGC...GTGCAGTAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp GGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTTGGCTTGGTCCCAGCTaGCTTTTTCTTCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: GLQADTPQDLLHTVLVTTWLGPS*LFLLFC
Trigger: ACAGAAGAGAAGAAAAAGGCAGCTGGGACCAAGCCA...AGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp AAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCAGTTGTTGCTTCATCTaGGGTCTCATTCTGCTTCCG +
Preference number: 4 (lower is better)
Translates to: KRSLRGLQADTPQDLLHTSCCFI*GLILLP
Trigger: CGGAAGCAGAATGAGACCGCAGATGAAGCAACAACT...GGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp CCTGCTGCTGCTCCAGGTGCCCAGGAGATCCAGTGTATCTACTTCACACCAGGGAGTTGTTGCTTCATCTaGGGTCTCATTCTGCTTCCG +
Preference number: 4 (lower is better)
Translates to: PAAAPGAQEIQCIYFTPGSCCFI*GLILLP
Trigger: CGGAAGCAGAATGAGACCGCAGATGAAGCAACAACT...CCCTGGTGTGAAGTAGATACACTGGATCTCCTGGGCACCTGGAGCAGCAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR GCA 90 bp GGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTAGTTGTTGCTTCATCTaGGGTCTCATTCTGCTTCCG +
Preference number: 4 (lower is better)
Translates to: GLQADTPQDLLHTVLVTTSCCFI*GLILLP
Trigger: CGGAAGCAGAATGAGACCGCAGATGAAGCAACAACT...AGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp ACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTAGCCTCCCCGGTAGCTaGCTCGCTTCTTCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: TCSTPSLSQLSPNTEFLGSLPGS*LASSSF
Trigger: AAACGAAGAAGAAGCGAGGCAGCTACCGGGGAGGCT...ACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp CACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTGCTCTCTGAAGCTTTaGCTGCTGCCTTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: HLRTCSTPSLSQLSPNTECSLKL*LLPFQH
Trigger: ATGCTGGAAAGGCAGCAGCCAAAGCTTCAGAGAGCA...CTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTTGCTCTCTGAAGCTTTaGCTGCTGCCTTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPCSLKL*LLPFQH
Trigger: ATGCTGGAAAGGCAGCAGCCAAAGCTTCAGAGAGCA...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp CACTCCCTTGGCCCAGGAATCTCTCTGCTCTTTACTTCCTGCGGTGATAGAGATCTGACTGCCTTGGCTTaGGGCTTAGCTGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: HSLGPGISLLFTSCGDRDLTALA*GLAAFC
Trigger: GCAGAAGGCAGCTAAGCCCCAAGCCAAGGCAGTCAG...ATCTCTATCACCGCAGGAAGTAAAGAGCAGAGAGATTCCTGGGCCAAGGGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165017.2
CDS-3UTR CCA 90 bp GCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCACGCTGCCTTTGGCTTCTaGGTCTGTGGTGTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: APHRPCHNCLLTRSFWVHAAFGF*VCGVSS
Trigger: GGAAGAAACACCACAGACCCAGAAGCCAAAGGCAGC...GTGGACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp CCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCGCTGCCTTTGGCTTCTaGGTCTGTGGTGTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PAPHRPCHNCLLTRSFWVAAFGF*VCGVSS
Trigger: GGAAGAAACACCACAGACCCAGAAGCCAAAGGCAGC...GACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp CAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACTGCTGCTGCTGCTGCTaGCGGCTGCTTTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: QLHGIHTLENPACQLVGYCCCCC*RLLCHW
Trigger: CCAATGGCAAAGCAGCCGCCAGCAGCAGCAGCAGCA...GTAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp ATGCTAAGCAAGCACACTACCACCCAGCTATGCCTCCCTGCCTCCTGGCTAGTCTTGGTACAGTCTTCTTaGGAGGTGCAGCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: MLSKHTTTQLCLPASWLVLVQSS*EVQLPS
Trigger: AGAAGGCAGCTGCACCTCCCAAGAAGACTGTACCAA...GACTAGCCAGGAGGCAGGGAGGCATAGCTGGGTGGTAGTGTGCTTGCTTAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CCA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACTTGGTACAGTCTTCTTaGGAGGTGCAGCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHLVQSS*EVQLPS
Trigger: AGAAGGCAGCTGCACCTCCCAAGAAGACTGTACCAA...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp GCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCACGCTTTCTTTGGAGCCTaGGTTCCCGGGGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: APHRPCHNCLLTRSFWVHAFFGA*VPGDFF
Trigger: AAAGAAGTCCCCGGGAACCCAGGCTCCAAAGAAAGC...GTGGACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp AGCCACGTCCCACCCCTGCCCTCACTGCCAATGGTCACATCCTACAGCTTTATAGCTTTCTTTGGAGCCTaGGTTCCCGGGGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: SHVPPLPSLPMVTSYSFIAFFGA*VPGDFF
Trigger: AAAGAAGTCCCCGGGAACCCAGGCTCCAAAGAAAGC...TATAAAGCTGTAGGATGTGACCATTGGCAGTGAGGGCAGGGGTGGGACGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CCA 90 bp ACTGCACCAAGAATGGCAATTTTATCCCCCAAAGTTGGTAGATCCACGCTGGCTCCTCCTCCTCCTCGCTaGAGCTGCTTTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: TAPRMAILSPKVGRSTLAPPPPR*SCFPPR
Trigger: GCGAGGAGGAAAGCAGCTCCAGCGAGGAGGAGGAGG...AGCCAGCGTGGATCTACCAACTTTGGGGGATAAAATTGCCATTCTTGGTGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp ACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTTTGTGGCACTTTTCTTaGAGGCCTCCTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: TCSTPSLSQLSPNTEFLGLWHFS*RPPPPR
Trigger: GCGAGGAGGAGGAGGCCTCCAAGAAAAGTGCCACAA...ACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACCCTCCTCTTCACTGCTaGAACTATCTGAGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHPPLHC*NYLSQS
Trigger: GCTCTGACTCAGATAGTTCCAGCAGTGAAGAGGAGG...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp AAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCTTTTCTCCTCTTCACTaGAATCTTCGGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KRSLRGLQADTPQDLLHTFSPLH*NLRSCC
Trigger: GCAGCAGCTCCGAAGATTCCAGTGAAGAGGAGAAAA...GGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACTCCATTCAGAGAAGCTaGAGTGCCATTGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHSIQRS*SAIGLA
Trigger: AGCAAGGCCAATGGCACTCCAGCTTCTCTGAATGGA...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp CCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCTGCCTGAACCTGGCTTaGTCCCAGCTGCCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: PAPHRPCHNCLLTRSFWVCLNLA*SQLPFS
Trigger: AGAAAAAGGCAGCTGGGACCAAGCCAGGTTCAGGCA...GACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTCTTTGGTGGACCTGTTaGGCCAGAAGCTATAGATGT +
Preference number: 4 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPLWWTC*ARSYRC
Trigger: ACATCTATAGCTTCTGGCTCAACAGGTCCACCAAAG...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp CACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGCTTTGGTGGACCTGTTaGGCCAGAAGCTATAGATGT +
Preference number: 4 (lower is better)
Translates to: HLRTCSTPSLSQLSPNTELWWTC*ARSYRC
Trigger: ACATCTATAGCTTCTGGCTCAACAGGTCCACCAAAG...CTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp ACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTTCAGCCTTCCTGCTCTaGGGTTTCTGGTTACTGCCT +
Preference number: 4 (lower is better)
Translates to: TCSTPSLSQLSPNTEFLGSAFLL*GFWLLP
Trigger: AGGCAGTAACCAGAAACCTCAGAGCAGGAAGGCTGA...ACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp CACAAGACTTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTCCAGGAGGCATTGGCGTCCTaGTGTGTAGCGCCGGTCGCT +
Preference number: 4 (lower is better)
Translates to: HKTYVIAHQGFHIKRILQEALAS*CVAPVA
Trigger: AGCGACCGGCGCTACACAGCAGGACGCCAATGCCTC...CTGGAGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp AAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCATTCTTCACTACTGCTaGTCTCTGAAGCTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: KRSLRGLQADTPQDLLHTILHYC*SLKLWL
Trigger: CAGCCAAAGCTTCAGAGAGCAGCAGTAGTGAAGAAT...GGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp GGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTATTCTTCACTACTGCTaGTCTCTGAAGCTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: GLQADTPQDLLHTVLVTTILHYC*SLKLWL
Trigger: CAGCCAAAGCTTCAGAGAGCAGCAGTAGTGAAGAAT...AGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp GGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGAGTCTGAGCTTTTGCTaGCACAGCTGCCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: GPAPHRPCHNCLLTRSFWSLSFC*HSCLWL
Trigger: AAGCCAAAGGCAGCTGTGGCAGCAAAAGCTCAGACT...CCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp GGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGAGTCTTCTTGGGAGGTaGAGCTGCCTTCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: GPAPHRPCHNCLLTRSFWSLLGR*SCLLLF
Trigger: GAAGAGAAGAAGGCAGCTGCACCTCCCAAGAAGACT...CCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp CCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCAGTCTTCTTGGGAGGTaGAGCTGCCTTCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: PAPHRPCHNCLLTRSFWVSLLGR*SCLLLF
Trigger: GAAGAGAAGAAGGCAGCTGCACCTCCCAAGAAGACT...GACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp ACAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTAGTCGTCACTGCTGTCTaGAGGCTGTGTCTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: TAAWHSHTRESCLPISRLVVTAV*RLCLRS
Trigger: GCTGCGCAGACACAGCCTGCAGACAGCAGTGACGAC...TAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp CCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCTTACTGCCTGCAGGTTaGTTAGGAGTTGTCACTGCC +
Preference number: 4 (lower is better)
Translates to: PAPHRPCHNCLLTRSFWVLLPAG*LGVVTA
Trigger: GGCAGTGACAACTCCTAAGCAACCTGCAGGCAGTAA...GACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp GGCCCAGGAATCTCTCTGCTCTTTACTTCCTGCGGTGATAGAGATCACACTTGGTATCTGAGTCAGAGCTaGTGTCCCCAGCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GPGISLLFTSCGDRDHTWYLSQS*CPQQPE
Trigger: CTCAGGCTGCTGGGGACAGCAGCTCTGACTCAGATA...CCAAGTGTGATCTCTATCACCGCAGGAAGTAAAGAGCAGAGAGATTCCTGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR GCA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACTCTCCTCCTCTTCACTaGTGGAACTATCTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHSPPLH*WNYLSQ
Trigger: CTGACTCAGATAGTTCCAGCAGTGAAGAGGAGGAGA...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp CAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACAACGGCTCCACCTGCTaGCTTCTTCTTAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: QLHGIHTLENPACQLVGYNGSTC*LLLSWG
Trigger: CCCCCAGCTAAGAAGAAGGCAGCAGGTGGAGCCGTT...GTAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp ACTGCACCAAGAATGGCAATTTTATCCCCCAAAGTTGGTAGATCCACGCTGGCTGCTGCTCTTGGCCTCTaGTTTCTTCCCAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TAPRMAILSPKVGRSTLAAALGL*FLPRGW
Trigger: CCAGCCCCTGGGAAGAAAGCAGAGGCCAAGAGCAGC...AGCCAGCGTGGATCTACCAACTTTGGGGGATAAAATTGCCATTCTTGGTGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp CACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGGCCATTGGCCTTGCTTaGCTGTATTTTAGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: HLRTCSTPSLSQLSPNTEAIGLA*LYFRGS
Trigger: ACTACCCCTAAAATACAGGCAAGCAAGGCCAATGGC...CTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTTGGCTTGGTCCCAGCTaGCTTTTTCTTCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPWLGPS*LFLLFC
Trigger: ACAGAAGAGAAGAAAAAGGCAGCTGGGACCAAGCCA...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp CACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGAGTTGTTGCTTCATCTaGGGTCTCATTCTGCTTCCG +
Preference number: 4 (lower is better)
Translates to: HLRTCSTPSLSQLSPNTESCCFI*GLILLP
Trigger: CGGAAGCAGAATGAGACCGCAGATGAAGCAACAACT...CTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp GCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCACTGCTCTCTGAAGCTTTaGCTGCTGCCTTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: APHRPCHNCLLTRSFWVHCSLKL*LLPFQH
Trigger: ATGCTGGAAAGGCAGCAGCCAAAGCTTCAGAGAGCA...GTGGACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp CACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGCTTCCTCTTCCTCACTaGATTCTTCACTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: HLRTCSTPSLSQLSPNTELPLPH*ILHYCC
Trigger: GCAGCAGTAGTGAAGAATCCAGTGAGGAAGAGGAAG...CTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTCTTCCTCTTCCTCACTaGATTCTTCACTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPLPLPH*ILHYCC
Trigger: GCAGCAGTAGTGAAGAATCCAGTGAGGAAGAGGAAG...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp GCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCACTTGGTACAGTCTTCTTaGGAGGTGCAGCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: APHRPCHNCLLTRSFWVHLVQSS*EVQLPS
Trigger: AGAAGGCAGCTGCACCTCCCAAGAAGACTGTACCAA...GTGGACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp TTACTGCACCAAGAATGGCAATTTTATCCCCCAAAGTTGGTAGATCCACGCTGGCTGCTGGAGCTCTTCTaGGTGGGGGCGGCAGCTACT +
Preference number: 4 (lower is better)
Translates to: LLHQEWQFYPPKLVDPRWLLELF*VGAAAT
Trigger: AGTAGCTGCCGCCCCCACCCAGAAGAGCTCCAGCAG...CCAGCGTGGATCTACCAACTTTGGGGGATAAAATTGCCATTCTTGGTGCAGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp CAATTTTATCCCCCAAAGTTGGTAGATCCACGCTGGCTTCTAGAAGCTTTGGTGCCTCCTCCTCCTCGCTaGAGCTGCTTTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: QFYPPKLVDPRWLLEALVPPPPR*SCFPPR
Trigger: GCGAGGAGGAAAGCAGCTCCAGCGAGGAGGAGGAGG...CACCAAAGCTTCTAGAAGCCAGCGTGGATCTACCAACTTTGGGGGATAAAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp GCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCACCCTCCTCTTCACTGCTaGAACTATCTGAGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: APHRPCHNCLLTRSFWVHPPLHC*NYLSQS
Trigger: GCTCTGACTCAGATAGTTCCAGCAGTGAAGAGGAGG...GTGGACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp GGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGCCTCCTCTTCACTGCTaGAACTATCTGAGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: GPAPHRPCHNCLLTRSFWPPLHC*NYLSQS
Trigger: GCTCTGACTCAGATAGTTCCAGCAGTGAAGAGGAGG...CCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTTTTTCTCCTCTTCACTaGAATCTTCGGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPFSPLH*NLRSCC
Trigger: GCAGCAGCTCCGAAGATTCCAGTGAAGAGGAGAAAA...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp ACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTTGCCTGAACCTGGCTTaGTCCCAGCTGCCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: TCSTPSLSQLSPNTEFLGCLNLA*SQLPFS
Trigger: AGAAAAAGGCAGCTGGGACCAAGCCAGGTTCAGGCA...ACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
3UTR CAA 72 bp CTGTCTCCTAACACGGAGTTTCTGGGTCCACTGGAGTaGAGTGCCAGTCTCCCAAAATCACCCTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LSPNTEFLGPLE*SASLPKSPFLC
Trigger: GCAAAGGAAGGGTGATTTTGGGAGACTGGCACTCAACTCCAGTGGACCCAGAAACTCCGTGTTAGGAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp CAAGACTTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTCCAGTAGCACACTGGCTCGCTTaGCCTGTGCGGCAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: QDLCHCPPGLSHKENPPVAHWLA*PVRQPS
Trigger: AGAAGGCTGCCGCACAGGTCAAGCGAGCCAGTGTGC...TACTGGAGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR TCA 90 bp TACCAGGTGAGCGTGGACACCAAACAGGGGAGGCAATGCCCGGTATCCGTTTCTCTCTTCCTCAGAACTTaGATCAGAATCGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: YQVSVDTKQGRQCPVSVSLFLRT*IRIVTA
Trigger: AGCAGTGACGATTCTGATTCAAGTTCTGAGGAAGAG...AGAAACGGATACCGGGCATTGCCTCCCCTGTTTGGTGTCCACGCTCACCTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR TCA 90 bp CACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGAGAATCCGAGCTGTCTaGAGAGCTTTCTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: HLRTCSTPSLSQLSPNTERIRAV*RAFCFL
Trigger: AAGAAAGCAGAAAGCTCTTCAGACAGCTCGGATTCT...CTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAGAATCCGAGCTGTCTaGAGAGCTTTCTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPRIRAV*RAFCFL
Trigger: AAGAAAGCAGAAAGCTCTTCAGACAGCTCGGATTCT...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp CAAGACTTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTCCAGTAGGCTCGCTTGACCTGTaGGGCAGCCTTCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: QDLCHCPPGLSHKENPPVGSLDL*GSLLCG
Trigger: CCCACACAGAAGGCTGCCGCACAGGTCAAGCGAGCC...TACTGGAGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp CACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTGGATTCTTCACTACTaGTGCTCTCTGAAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: HLRTCSTPSLSQLSPNTEWILHY*CSLKLW
Trigger: CCAAAGCTTCAGAGAGCAGCAGTAGTGAAGAATCCA...CTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp GGCCCAGGAATCTCTCTGCTCTTTACTTCCTGCGGTGATAGAGATCACACTTGGTGGAAGAATCCTCACTaGTGGAGCTCTTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GPGISLLFTSCGDRDHTWWKNPH*WSSSGW
Trigger: CCACCCAGAAGAGCTCCAGCAGTGAGGATTCTTCCA...CCAAGTGTGATCTCTATCACCGCAGGAAGTAAAGAGCAGAGAGATTCCTGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR GCA 90 bp CACTCCCTTGGCCCAGGAATCTCTCTGCTCTTTACTTCCTGCGGTGATAGAGATTGGAAGAATCCTCACTaGTGGAGCTCTTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: HSLGPGISLLFTSCGDRDWKNPH*WSSSGW
Trigger: CCACCCAGAAGAGCTCCAGCAGTGAGGATTCTTCCA...ATCTCTATCACCGCAGGAAGTAAAGAGCAGAGAGATTCCTGGGCCAAGGGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR GCA 90 bp CCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCTCTCCTCCTCTTCACTaGTGGAACTATCTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PAPHRPCHNCLLTRSFWVSPPLH*WNYLSQ
Trigger: CTGACTCAGATAGTTCCAGCAGTGAAGAGGAGGAGA...GACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp ACAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTAAACGGCTCCACCTGCTaGCTTCTTCTTAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: TAAWHSHTRESCLPISRLNGSTC*LLLSWG
Trigger: CCCCCAGCTAAGAAGAAGGCAGCAGGTGGAGCCGTT...TAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp GCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCACTGGCTTGGTCCCAGCTaGCTTTTTCTTCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: APHRPCHNCLLTRSFWVHWLGPS*LFLLFC
Trigger: ACAGAAGAGAAGAAAAAGGCAGCTGGGACCAAGCCA...GTGGACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp GGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGAGTTGTTGCTTCATCTaGGGTCTCATTCTGCTTCCG +
Preference number: 4 (lower is better)
Translates to: GPAPHRPCHNCLLTRSFWSCCFI*GLILLP
Trigger: CGGAAGCAGAATGAGACCGCAGATGAAGCAACAACT...CCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACAGCTTGAGGAGTTGTTaGTTCATCTGCGGTCTCATT +
Preference number: 4 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHSLRSC*FICGLI
Trigger: AATGAGACCGCAGATGAAGCAACAACTCCTCAAGCT...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp CCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCTTCCTCTTCCTCACTaGATTCTTCACTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: PAPHRPCHNCLLTRSFWVLPLPH*ILHYCC
Trigger: GCAGCAGTAGTGAAGAATCCAGTGAGGAAGAGGAAG...GACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp TTACTGCACCAAGAATGGCAATTTTATCCCCCAAAGTTGGTAGATCCACGCTGGCGCAGCAGCTTTCTTTaGAGCCTGGGTTCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: LLHQEWQFYPPKLVDPRWRSSFL*SLGSRG
Trigger: TCCCCGGGAACCCAGGCTCCAAAGAAAGCTGCTGCG...CCAGCGTGGATCTACCAACTTTGGGGGATAAAATTGCCATTCTTGGTGCAGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp GCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACTGCACTTTCTTCCCAGGGGCTaGTGTAGAAACGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: AWHSHTRESCLPISRLLHFLPRG*CRNGST
Trigger: GGTGGAGCCGTTTCTACACCAGCCCCTGGGAAGAAA...GTGCAGTAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp GGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGTTTTCTCCTCTTCACTaGAATCTTCGGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GPAPHRPCHNCLLTRSFWFSPLH*NLRSCC
Trigger: GCAGCAGCTCCGAAGATTCCAGTGAAGAGGAGAAAA...CCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp CCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCTTTTCTCCTCTTCACTaGAATCTTCGGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PAPHRPCHNCLLTRSFWVFSPLH*NLRSCC
Trigger: GCAGCAGCTCCGAAGATTCCAGTGAAGAGGAGAAAA...GACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp ACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTTCCATTCAGAGAAGCTaGAGTGCCATTGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: TCSTPSLSQLSPNTEFLGSIQRS*SAIGLA
Trigger: AGCAAGGCCAATGGCACTCCAGCTTCTCTGAATGGA...ACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CCA 90 bp ACAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACTGACTGCCTTGGCTTaGGGCTTAGCTGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: TAAWHSHTRESCLPISRLLTALA*GLAAFW
Trigger: CCAGAAGGCAGCTAAGCCCCAAGCCAAGGCAGTCAG...TAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR TCA 90 bp ACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCTTTGGTGGACCTGTTaGGCCAGAAGCTATAGATGT +
Preference number: 4 (lower is better)
Translates to: TCSTPSLSQLSPNTEFLGLWWTC*ARSYRC
Trigger: ACATCTATAGCTTCTGGCTCAACAGGTCCACCAAAG...ACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp GCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCACCTCTTCCTCAGAACTTaGATCAGAATCGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: APHRPCHNCLLTRSFWVHLFLRT*IRIVTA
Trigger: AGCAGTGACGATTCTGATTCAAGTTCTGAGGAAGAG...GTGGACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR TCA 90 bp CACCAAGAATGGCAATTTTATCCCCCAAAGTTGGTAGATCCACGCTGGCTTCTACAGATGGCTTCGGAGTaGCAGCTGGCTTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: HQEWQFYPPKLVDPRWLLQMASE*QLAWDS
Trigger: AGAGTCCCAAGCCAGCTGTCACTCCGAAGCCATCTG...TAGAAGCCAGCGTGGATCTACCAACTTTGGGGGATAAAATTGCCATTCTTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR TCA 90 bp GCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACTGCACTCAGCCTTCCTGCTCTaGGGTTTCTGGTTACTGCCT +
Preference number: 4 (lower is better)
Translates to: AWHSHTRESCLPISRLLHSAFLL*GFWLLP
Trigger: AGGCAGTAACCAGAAACCTCAGAGCAGGAAGGCTGA...GTGCAGTAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR TCA 90 bp ACAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTAACTGCTGGAACTATCTaGGTCAGAGCTGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: TAAWHSHTRESCLPISRLTAGTI*VRAAVP
Trigger: GGGGACAGCAGCTCTGACTCAGATAGTTCCAGCAGT...TAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp TCATCACAAGACTTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTGGCTCGCTTGACCTGTaGGGCAGCCTTCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SSQDLCHCPPGLSHKENPGSLDL*GSLLCG
Trigger: CCCACACAGAAGGCTGCCGCACAGGTCAAGCGAGCC...AGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTGTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp AAGCACACTACCACCCAGCTATGCCTCCCTGCCTCCTGGCTAGTCTGTATCAGTATTCTTCACTACTGCTaGTCTCTGAAGCTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: KHTTTQLCLPASWLVCISILHYC*SLKLWL
Trigger: CAGCCAAAGCTTCAGAGAGCAGCAGTAGTGAAGAAT...ACTGATACAGACTAGCCAGGAGGCAGGGAGGCATAGCTGGGTGGTAGTGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR GCA 90 bp TTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTCCAGTAGGGAAACGCAGGAGGTCTGACTaGCTTGGCTTGGGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: LCHCPPGLSHKENPPVGKRRRSD*LGLGLS
Trigger: GCTAAGCCCCAAGCCAAGGCAGTCAGACCTCCTGCG...TTTCCCTACTGGAGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp GGCCCAATGGATGAAGATGAGCACAGAGTATGCTTAGCAGACAATCATCACAAGAACGGCTCCACCTGCTaGCTTCTTCTTAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GPMDEDEHRVCLADNHHKNGSTC*LLLSWG
Trigger: CCCCCAGCTAAGAAGAAGGCAGCAGGTGGAGCCGTT...CTTGTGATGATTGTCTGCTAAGCATACTCTGTGCTCATCTTCATCCATTGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp GGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGAGCTTGAGGAGTTGTTaGTTCATCTGCGGTCTCATT +
Preference number: 4 (lower is better)
Translates to: GPAPHRPCHNCLLTRSFWSLRSC*FICGLI
Trigger: AATGAGACCGCAGATGAAGCAACAACTCCTCAAGCT...CCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp AAGACACAGAACTTTGACCATGCAGCCTTCCACAAGGAGCTGCCACAGCTTTTAAGCCTCCCCGGTAGCTaGCTCGCTTCTTCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: KTQNFDHAAFHKELPQLLSLPGS*LASSSF
Trigger: AAACGAAGAAGAAGCGAGGCAGCTACCGGGGAGGCT...TAAAAGCTGTGGCAGCTCCTTGTGGAAGGCTGCATGGTCAAAGTTCTGTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CCA 90 bp ACTGCACCAAGAATGGCAATTTTATCCCCCAAAGTTGGTAGATCCACGCTGGCTTGCCACAGCTGCCTTTaGCTTCTGGGTCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: TAPRMAILSPKVGRSTLACHSCL*LLGLWC
Trigger: ACACCACAGACCCAGAAGCCAAAGGCAGCTGTGGCA...AGCCAGCGTGGATCTACCAACTTTGGGGGATAAAATTGCCATTCTTGGTGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp AAGACACAGAACTTTGACCATGCAGCCTTCCACAAGGAGCTGCCACAGCTTTTATTTCTTCCCAGGGGCTaGTGTAGAAACGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: KTQNFDHAAFHKELPQLLFLPRG*CRNGST
Trigger: GGTGGAGCCGTTTCTACACCAGCCCCTGGGAAGAAA...TAAAAGCTGTGGCAGCTCCTTGTGGAAGGCTGCATGGTCAAAGTTCTGTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR TCA 90 bp ACTGCACCAAGAATGGCAATTTTATCCCCCAAAGTTGGTAGATCCACGCTGGCTTGGTGTTTCTTCCTCTaGGCTGGAGTCCGAATCCGA +
Preference number: 4 (lower is better)
Translates to: TAPRMAILSPKVGRSTLAWCFFL*AGVRIR
Trigger: TCGGATTCGGACTCCAGCTCAGAGGAAGAAACACCA...AGCCAGCGTGGATCTACCAACTTTGGGGGATAAAATTGCCATTCTTGGTGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR TCA 90 bp AAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCTTAACTTTCTTAGCTTaGGGAGTTGTTGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: KRSLRGLQADTPQDLLHTLTFLA*GVVASS
Trigger: AGATGAAGCAACAACTCCTCAAGCTAAGAAAGTTAA...GGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp ACAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTATTTTGCTGCCACAGCTaGCTTTGGCTTCTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: TAAWHSHTRESCLPISRLFCCHS*LWLLGL
Trigger: CAGACCCAGAAGCCAAAGGCAGCTGTGGCAGCAAAA...TAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp TTTATAATCCACTCCCTTGGCCCAGGAATCTCTCTGCTCTTTACTTCCTGCGGTAGAAACGGCTCCACCTaGTGCCTTCTTCTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: FIIHSLGPGISLLFTSCGRNGST*CLLLSW
Trigger: CCAGCTAAGAAGAAGGCAGCAGGTGGAGCCGTTTCT...ACCGCAGGAAGTAAAGAGCAGAGAGATTCCTGGGCCAAGGGAGTGGATTATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR GCA 90 bp CACAAGACTTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTCCAGAGCCTCCCCGGTAGCTaGCTCGCTTCTTCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: HKTYVIAHQGFHIKRILQSLPGS*LASSSF
Trigger: AAACGAAGAAGAAGCGAGGCAGCTACCGGGGAGGCT...CTGGAGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp CACAAGACTTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTCCAGCGGCAGCCTTCTGTGTaGGAAGTCCCTGGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: HKTYVIAHQGFHIKRILQRQPSV*EVPGLF
Trigger: AAAAAGCCCAGGGACTTCCCACACAGAAGGCTGCCG...CTGGAGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp AATGGTCACATCCTACAGCTTTATAATCCACTCCCTTGGCCCAGGAATCTCTCTCGGCAGCCTTCTGTGTaGGAAGTCCCTGGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: NGHILQLYNPLPWPRNLSRQPSV*EVPGLF
Trigger: AAAAAGCCCAGGGACTTCCCACACAGAAGGCTGCCG...AGAGAGATTCCTGGGCCAAGGGAGTGGATTATAAAGCTGTAGGATGTGACCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CCA 90 bp CAATTTTATCCCCCAAAGTTGGTAGATCCACGCTGGCTTCTAGAAGCTTTGGTGCGGCAGCCTTCTGTGTaGGAAGTCCCTGGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: QFYPPKLVDPRWLLEALVRQPSV*EVPGLF
Trigger: AAAAAGCCCAGGGACTTCCCACACAGAAGGCTGCCG...CACCAAAGCTTCTAGAAGCCAGCGTGGATCTACCAACTTTGGGGGATAAAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp GGCCCAGGAATCTCTCTGCTCTTTACTTCCTGCGGTGATAGAGATCACACTTGGCTTCCTCTTCCTCACTaGATTCTTCACTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: GPGISLLFTSCGDRDHTWLPLPH*ILHYCC
Trigger: GCAGCAGTAGTGAAGAATCCAGTGAGGAAGAGGAAG...CCAAGTGTGATCTCTATCACCGCAGGAAGTAAAGAGCAGAGAGATTCCTGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CCA 90 bp ACAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTAGCTGCCTTTGGCTTCTaGGTCTGTGGTGTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: TAAWHSHTRESCLPISRLAAFGF*VCGVSS
Trigger: GGAAGAAACACCACAGACCCAGAAGCCAAAGGCAGC...TAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp GCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACTGCACTTGGTACAGTCTTCTTaGGAGGTGCAGCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: AWHSHTRESCLPISRLLHLVQSS*EVQLPS
Trigger: AGAAGGCAGCTGCACCTCCCAAGAAGACTGTACCAA...GTGCAGTAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp ACAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACCTCCTCCTCTTCACTaGAAGAATCCTCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: TAAWHSHTRESCLPISRLPPPLH*KNPHCW
Trigger: CCAGCAGTGAGGATTCTTCCAGTGAAGAGGAGGAGG...TAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp AATGGTCACATCCTACAGCTTTATAATCCACTCCCTTGGCCCAGGAATCTCTCTTTTCTTCCCAGGGGCTaGTGTAGAAACGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: NGHILQLYNPLPWPRNLSFLPRG*CRNGST
Trigger: GGTGGAGCCGTTTCTACACCAGCCCCTGGGAAGAAA...AGAGAGATTCCTGGGCCAAGGGAGTGGATTATAAAGCTGTAGGATGTGACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CCA 90 bp GGCCCAATGGATGAAGATGAGCACAGAGTATGCTTAGCAGACAATCATCACAAGTGCTGCTGCTGCTCTTaGCCTCTGCTTTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: GPMDEDEHRVCLADNHHKCCCCS*PLLSSQ
Trigger: CTGGGAAGAAAGCAGAGGCCAAGAGCAGCAGCAGCA...CTTGTGATGATTGTCTGCTAAGCATACTCTGTGCTCATCTTCATCCATTGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR TCA 90 bp CAATTTTATCCCCCAAAGTTGGTAGATCCACGCTGGCTTCTAGAAGCTTTGGTGGCTTCGGCTTTAGTCTaGGCTTTTGCTGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: QFYPPKLVDPRWLLEALVASALV*AFAATA
Trigger: AGCTGTGGCAGCAAAAGCTCAGACTAAAGCCGAAGC...CACCAAAGCTTCTAGAAGCCAGCGTGGATCTACCAACTTTGGGGGATAAAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR TCA 90 bp CACAAGACTTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTCCAGGCTTCGGCTTTAGTCTaGGCTTTTGCTGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: HKTYVIAHQGFHIKRILQASALV*AFAATA
Trigger: AGCTGTGGCAGCAAAAGCTCAGACTAAAGCCGAAGC...CTGGAGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR TCA 90 bp TTACTGCACCAAGAATGGCAATTTTATCCCCCAAAGTTGGTAGATCCACGCTGGCTTCTTCTCTTCCTCTaGGTCATCGCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLHQEWQFYPPKLVDPRWLLLFL*VIAAAA
Trigger: AGCAGCAGCAGCGATGACTCAGAGGAAGAGAAGAAG...CCAGCGTGGATCTACCAACTTTGGGGGATAAAATTGCCATTCTTGGTGCAGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR TCA 90 bp CACTCCCTTGGCCCAGGAATCTCTCTGCTCTTTACTTCCTGCGGTGATAGAGATAGAATCCGAGCTGTCTaGAGAGCTTTCTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: HSLGPGISLLFTSCGDRDRIRAV*RAFCFL
Trigger: AAGAAAGCAGAAAGCTCTTCAGACAGCTCGGATTCT...ATCTCTATCACCGCAGGAAGTAAAGAGCAGAGAGATTCCTGGGCCAAGGGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR TCA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACTTAACTTTCTTAGCTTaGGGAGTTGTTGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHLTFLA*GVVASS
Trigger: AGATGAAGCAACAACTCCTCAAGCTAAGAAAGTTAA...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp CAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACTCTCCTCCTCTTCACTaGTGGAACTATCTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: QLHGIHTLENPACQLVGYSPPLH*WNYLSQ
Trigger: CTGACTCAGATAGTTCCAGCAGTGAAGAGGAGGAGA...GTAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp CAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACGCCATTGGCCTTGCTTaGCTGTATTTTAGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: QLHGIHTLENPACQLVGYAIGLA*LYFRGS
Trigger: ACTACCCCTAAAATACAGGCAAGCAAGGCCAATGGC...GTAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp GCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACTGCACCTTCCTCTTCCTCACTaGATTCTTCACTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: AWHSHTRESCLPISRLLHLPLPH*ILHYCC
Trigger: GCAGCAGTAGTGAAGAATCCAGTGAGGAAGAGGAAG...GTGCAGTAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp AGCAGTAACAGCTACCAAGAACAAAACAAAGACAGCTGCATGGCATTCACACACTGCCACAGCTGCCTTTaGCTTCTGGGTCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: SSNSYQEQNKDSCMAFTHCHSCL*LLGLWC
Trigger: ACACCACAGACCCAGAAGCCAAAGGCAGCTGTGGCA...GTGTGTGAATGCCATGCAGCTGTCTTTGTTTTGTTCTTGGTAGCTGTTACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp ACAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTATTGGTACAGTCTTCTTaGGAGGTGCAGCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: TAAWHSHTRESCLPISRLLVQSS*EVQLPS
Trigger: AGAAGGCAGCTGCACCTCCCAAGAAGACTGTACCAA...TAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp AATGGTCACATCCTACAGCTTTATAATCCACTCCCTTGGCCCAGGAATCTCTCTCCTCCTCCTCTTCACTaGAAGAATCCTCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: NGHILQLYNPLPWPRNLSPPPLH*KNPHCW
Trigger: CCAGCAGTGAGGATTCTTCCAGTGAAGAGGAGGAGG...AGAGAGATTCCTGGGCCAAGGGAGTGGATTATAAAGCTGTAGGATGTGACCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CCA 90 bp ACAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACCTCCTCTTCACTGCTaGAACTATCTGAGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: TAAWHSHTRESCLPISRLPPLHC*NYLSQS
Trigger: GCTCTGACTCAGATAGTTCCAGCAGTGAAGAGGAGG...TAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp TTACTGCACCAAGAATGGCAATTTTATCCCCCAAAGTTGGTAGATCCACGCTGGTGCCTGAACCTGGCTTaGTCCCAGCTGCCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: LLHQEWQFYPPKLVDPRWCLNLA*SQLPFS
Trigger: AGAAAAAGGCAGCTGGGACCAAGCCAGGTTCAGGCA...CCAGCGTGGATCTACCAACTTTGGGGGATAAAATTGCCATTCTTGGTGCAGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp CACAAGACTTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTCCAGTGCCTGAACCTGGCTTaGTCCCAGCTGCCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: HKTYVIAHQGFHIKRILQCLNLA*SQLPFS
Trigger: AGAAAAAGGCAGCTGGGACCAAGCCAGGTTCAGGCA...CTGGAGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR TCA 90 bp ACAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACTTTGGTGGACCTGTTaGGCCAGAAGCTATAGATGT +
Preference number: 4 (lower is better)
Translates to: TAAWHSHTRESCLPISRLLWWTC*ARSYRC
Trigger: ACATCTATAGCTTCTGGCTCAACAGGTCCACCAAAG...TAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000225780.2
CDS-3UTR TCA 90 bp AGCAGTAACAGCTACCAAGAACAAAACAAAGACAGCTGCATGGCATTCACACACGCTTCGGCTTTAGTCTaGGCTTTTGCTGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: SSNSYQEQNKDSCMAFTHASALV*AFAATA
Trigger: AGCTGTGGCAGCAAAAGCTCAGACTAAAGCCGAAGC...GTGTGTGAATGCCATGCAGCTGTCTTTGTTTTGTTCTTGGTAGCTGTTACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR TCA 90 bp GCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACTGCACCTCTTCCTCAGAACTTaGATCAGAATCGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: AWHSHTRESCLPISRLLHLFLRT*IRIVTA
Trigger: AGCAGTGACGATTCTGATTCAAGTTCTGAGGAAGAG...GTGCAGTAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR TCA 90 bp GGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGTTAACTTTCTTAGCTTaGGGAGTTGTTGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: GPAPHRPCHNCLLTRSFWLTFLA*GVVASS
Trigger: AGATGAAGCAACAACTCCTCAAGCTAAGAAAGTTAA...CCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR GCA 90 bp GGAAAATTATTACCATGTGTTGTTTTGCTTTGCCTTAGGCAACAGCTAAGACTTGGCTCGCTTGACCTGTaGGGCAGCCTTCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: GKLLPCVVLLCLRQQLRLGSLDL*GSLLCG
Trigger: CCCACACAGAAGGCTGCCGCACAGGTCAAGCGAGCC...AAGTCTTAGCTGTTGCCTAAGGCAAAGCAAAACAACACATGGTAATAATTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp CAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACATTCTTCACTACTGCTaGTCTCTGAAGCTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: QLHGIHTLENPACQLVGYILHYC*SLKLWL
Trigger: CAGCCAAAGCTTCAGAGAGCAGCAGTAGTGAAGAAT...GTAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp TTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTCCAGTAGGGAAATTTTGCTGCCACAGCTaGCTTTGGCTTCTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LCHCPPGLSHKENPPVGKFCCHS*LWLLGL
Trigger: CAGACCCAGAAGCCAAAGGCAGCTGTGGCAGCAAAA...TTTCCCTACTGGAGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp CACCAAGAATGGCAATTTTATCCCCCAAAGTTGGTAGATCCACGCTGGCTTCTATGCTGTCAGCCTTCCTaGTCTGAGGTTTCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: HQEWQFYPPKLVDPRWLLCCQPS*SEVSGY
Trigger: GTAACCAGAAACCTCAGAGCAGGAAGGCTGACAGCA...TAGAAGCCAGCGTGGATCTACCAACTTTGGGGGATAAAATTGCCATTCTTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp TCATCACAAGACTTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTTATCTGAGTCAGAGCTaGTGTCCCCAGCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SSQDLCHCPPGLSHKENPYLSQS*CPQQPE
Trigger: CTCAGGCTGCTGGGGACAGCAGCTCTGACTCAGATA...AGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTGTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp GCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACTGCACAGCTTGAGGAGTTGTTaGTTCATCTGCGGTCTCATT +
Preference number: 4 (lower is better)
Translates to: AWHSHTRESCLPISRLLHSLRSC*FICGLI
Trigger: AATGAGACCGCAGATGAAGCAACAACTCCTCAAGCT...GTGCAGTAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp GGCCCAATGGATGAAGATGAGCACAGAGTATGCTTAGCAGACAATCATCACAAGTGCTCTCTGAAGCTTTaGCTGCTGCCTTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: GPMDEDEHRVCLADNHHKCSLKL*LLPFQH
Trigger: ATGCTGGAAAGGCAGCAGCCAAAGCTTCAGAGAGCA...CTTGTGATGATTGTCTGCTAAGCATACTCTGTGCTCATCTTCATCCATTGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp CACCAAGAATGGCAATTTTATCCCCCAAAGTTGGTAGATCCACGCTGGCTTCTATCCATTCAGAGAAGCTaGAGTGCCATTGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: HQEWQFYPPKLVDPRWLLSIQRS*SAIGLA
Trigger: AGCAAGGCCAATGGCACTCCAGCTTCTCTGAATGGA...TAGAAGCCAGCGTGGATCTACCAACTTTGGGGGATAAAATTGCCATTCTTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp AAACATGTAGCAGTAACAGCTACCAAGAACAAAACAAAGACAGCTGCATGGCATCTGACTGCCTTGGCTTaGGGCTTAGCTGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: KHVAVTATKNKTKTAAWHLTALA*GLAAFW
Trigger: CCAGAAGGCAGCTAAGCCCCAAGCCAAGGCAGTCAG...ATGCCATGCAGCTGTCTTTGTTTTGTTCTTGGTAGCTGTTACTGCTACATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR TCA 90 bp TCATCACAAGACTTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTTGGTGTTTCTTCCTCTaGGCTGGAGTCCGAATCCGA +
Preference number: 4 (lower is better)
Translates to: SSQDLCHCPPGLSHKENPWCFFL*AGVRIR
Trigger: TCGGATTCGGACTCCAGCTCAGAGGAAGAAACACCA...AGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTGTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR TCA 90 bp AAACATGTAGCAGTAACAGCTACCAAGAACAAAACAAAGACAGCTGCATGGCATACTGCTGGAACTATCTaGGTCAGAGCTGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: KHVAVTATKNKTKTAAWHTAGTI*VRAAVP
Trigger: GGGGACAGCAGCTCTGACTCAGATAGTTCCAGCAGT...ATGCCATGCAGCTGTCTTTGTTTTGTTCTTGGTAGCTGTTACTGCTACATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp ACTGCACCAAGAATGGCAATTTTATCCCCCAAAGTTGGTAGATCCACGCTGGCTTGGATTCTTCACTACTaGTGCTCTCTGAAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: TAPRMAILSPKVGRSTLAWILHY*CSLKLW
Trigger: CCAAAGCTTCAGAGAGCAGCAGTAGTGAAGAATCCA...AGCCAGCGTGGATCTACCAACTTTGGGGGATAAAATTGCCATTCTTGGTGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp AGCAGTAACAGCTACCAAGAACAAAACAAAGACAGCTGCATGGCATTCACACACAGTCTGAGCTTTTGCTaGCACAGCTGCCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: SSNSYQEQNKDSCMAFTHSLSFC*HSCLWL
Trigger: AAGCCAAAGGCAGCTGTGGCAGCAAAAGCTCAGACT...GTGTGTGAATGCCATGCAGCTGTCTTTGTTTTGTTCTTGGTAGCTGTTACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp TTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTCCAGTAGGGAAAAGTCTTCTTGGGAGGTaGAGCTGCCTTCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LCHCPPGLSHKENPPVGKSLLGR*SCLLLF
Trigger: GAAGAGAAGAAGGCAGCTGCACCTCCCAAGAAGACT...TTTCCCTACTGGAGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp TTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTCCAGTAGGGAAATTACTGCCTGCAGGTTaGTTAGGAGTTGTCACTGCC +
Preference number: 4 (lower is better)
Translates to: LCHCPPGLSHKENPPVGKLLPAG*LGVVTA
Trigger: GGCAGTGACAACTCCTAAGCAACCTGCAGGCAGTAA...TTTCCCTACTGGAGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp CACCAAGAATGGCAATTTTATCCCCCAAAGTTGGTAGATCCACGCTGGCTTCTAGCCATTGGCCTTGCTTaGCTGTATTTTAGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: HQEWQFYPPKLVDPRWLLAIGLA*LYFRGS
Trigger: ACTACCCCTAAAATACAGGCAAGCAAGGCCAATGGC...TAGAAGCCAGCGTGGATCTACCAACTTTGGGGGATAAAATTGCCATTCTTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp CACCAAGAATGGCAATTTTATCCCCCAAAGTTGGTAGATCCACGCTGGCTTCTATGGCTTGGTCCCAGCTaGCTTTTTCTTCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: HQEWQFYPPKLVDPRWLLWLGPS*LFLLFC
Trigger: ACAGAAGAGAAGAAAAAGGCAGCTGGGACCAAGCCA...TAGAAGCCAGCGTGGATCTACCAACTTTGGGGGATAAAATTGCCATTCTTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp CACAAGACTTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTCCAGTTTTCTCCTCTTCACTaGAATCTTCGGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HKTYVIAHQGFHIKRILQFSPLH*NLRSCC
Trigger: GCAGCAGCTCCGAAGATTCCAGTGAAGAGGAGAAAA...CTGGAGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR TCA 90 bp AAACATGTAGCAGTAACAGCTACCAAGAACAAAACAAAGACAGCTGCATGGCATTGGTGTTTCTTCCTCTaGGCTGGAGTCCGAATCCGA +
Preference number: 4 (lower is better)
Translates to: KHVAVTATKNKTKTAAWHWCFFL*AGVRIR
Trigger: TCGGATTCGGACTCCAGCTCAGAGGAAGAAACACCA...ATGCCATGCAGCTGTCTTTGTTTTGTTCTTGGTAGCTGTTACTGCTACATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR TCA 90 bp CAATTTTATCCCCCAAAGTTGGTAGATCCACGCTGGCTTCTAGAAGCTTTGGTGCTCTTCCTCAGAACTTaGATCAGAATCGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: QFYPPKLVDPRWLLEALVLFLRT*IRIVTA
Trigger: AGCAGTGACGATTCTGATTCAAGTTCTGAGGAAGAG...CACCAAAGCTTCTAGAAGCCAGCGTGGATCTACCAACTTTGGGGGATAAAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR TCA 90 bp CACAAGACTTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTCCAGAGAATCCGAGCTGTCTaGAGAGCTTTCTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: HKTYVIAHQGFHIKRILQRIRAV*RAFCFL
Trigger: AAGAAAGCAGAAAGCTCTTCAGACAGCTCGGATTCT...CTGGAGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp CAATTTTATCCCCCAAAGTTGGTAGATCCACGCTGGCTTCTAGAAGCTTTGGTGTGGATTCTTCACTACTaGTGCTCTCTGAAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: QFYPPKLVDPRWLLEALVWILHY*CSLKLW
Trigger: CCAAAGCTTCAGAGAGCAGCAGTAGTGAAGAATCCA...CACCAAAGCTTCTAGAAGCCAGCGTGGATCTACCAACTTTGGGGGATAAAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp CAAGACTTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTCCAGTAGCCATTGGCCTTGCTTaGCTGTATTTTAGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: QDLCHCPPGLSHKENPPVAIGLA*LYFRGS
Trigger: ACTACCCCTAAAATACAGGCAAGCAAGGCCAATGGC...TACTGGAGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp GGAAAATTATTACCATGTGTTGTTTTGCTTTGCCTTAGGCAACAGCTAAGACTTGGCAGCTACTTTCACTaGGGCCTTGGCCACGACTTG +
Preference number: 4 (lower is better)
Translates to: GKLLPCVVLLCLRQQLRLGSYFH*GLGHDL
Trigger: CAAGTCGTGGCCAAGGCCCCAGTGAAAGTAGCTGCC...AAGTCTTAGCTGTTGCCTAAGGCAAAGCAAAACAACACATGGTAATAATTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR CAA 72 bp CATTCACTTTATTGTTTTGTGGTAAGACACAGAACTTaGACCATGCAGCCTTCCACAAGGAGCTGCCACAGC +
Preference number: 4 (lower is better)
Translates to: HSLYCFVVRHRT*TMQPSTRSCHS
Trigger: GCTGTGGCAGCTCCTTGTGGAAGGCTGCATGGTCAAAGTTCTGTGTCTTACCACAAAACAATAAAGTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR TCA 90 bp AGCAGTAACAGCTACCAAGAACAAAACAAAGACAGCTGCATGGCATTCACACACACTGCTGTCACTGGATaGAGTCTCTTTCTTAGCCTT +
Preference number: 4 (lower is better)
Translates to: SSNSYQEQNKDSCMAFTHTAVTG*SLFLSL
Trigger: AAGGCTAAGAAAGAGACTTCATCCAGTGACAGCAGT...GTGTGTGAATGCCATGCAGCTGTCTTTGTTTTGTTCTTGGTAGCTGTTACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR TCA 90 bp GCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACTGCACTTAACTTTCTTAGCTTaGGGAGTTGTTGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: AWHSHTRESCLPISRLLHLTFLA*GVVASS
Trigger: AGATGAAGCAACAACTCCTCAAGCTAAGAAAGTTAA...GTGCAGTAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp AGCAGTAACAGCTACCAAGAACAAAACAAAGACAGCTGCATGGCATTCACACACTGGATTCTTCACTACTaGTGCTCTCTGAAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SSNSYQEQNKDSCMAFTHWILHY*CSLKLW
Trigger: CCAAAGCTTCAGAGAGCAGCAGTAGTGAAGAATCCA...GTGTGTGAATGCCATGCAGCTGTCTTTGTTTTGTTCTTGGTAGCTGTTACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp AAACATGTAGCAGTAACAGCTACCAAGAACAAAACAAAGACAGCTGCATGGCATAGTCTGAGCTTTTGCTaGCACAGCTGCCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: KHVAVTATKNKTKTAAWHSLSFC*HSCLWL
Trigger: AAGCCAAAGGCAGCTGTGGCAGCAAAAGCTCAGACT...ATGCCATGCAGCTGTCTTTGTTTTGTTCTTGGTAGCTGTTACTGCTACATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp AAACATGTAGCAGTAACAGCTACCAAGAACAAAACAAAGACAGCTGCATGGCATTTACTGCCTGCAGGTTaGTTAGGAGTTGTCACTGCC +
Preference number: 4 (lower is better)
Translates to: KHVAVTATKNKTKTAAWHLLPAG*LGVVTA
Trigger: GGCAGTGACAACTCCTAAGCAACCTGCAGGCAGTAA...ATGCCATGCAGCTGTCTTTGTTTTGTTCTTGGTAGCTGTTACTGCTACATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp TCATCACAAGACTTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTTCTCCTCCTCTTCACTaGTGGAACTATCTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: SSQDLCHCPPGLSHKENPSPPLH*WNYLSQ
Trigger: CTGACTCAGATAGTTCCAGCAGTGAAGAGGAGGAGA...AGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTGTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp AAACATGTAGCAGTAACAGCTACCAAGAACAAAACAAAGACAGCTGCATGGCATTCCATTCAGAGAAGCTaGAGTGCCATTGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: KHVAVTATKNKTKTAAWHSIQRS*SAIGLA
Trigger: AGCAAGGCCAATGGCACTCCAGCTTCTCTGAATGGA...ATGCCATGCAGCTGTCTTTGTTTTGTTCTTGGTAGCTGTTACTGCTACATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp GGAAAATTATTACCATGTGTTGTTTTGCTTTGCCTTAGGCAACAGCTAAGACTTTTTTGCTGCCACAGCTaGCTTTGGCTTCTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GKLLPCVVLLCLRQQLRLFCCHS*LWLLGL
Trigger: CAGACCCAGAAGCCAAAGGCAGCTGTGGCAGCAAAA...AAGTCTTAGCTGTTGCCTAAGGCAAAGCAAAACAACACATGGTAATAATTTTCC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR GCA 90 bp TCATCACAAGACTTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTAGCTTGAGGAGTTGTTaGTTCATCTGCGGTCTCATT +
Preference number: 4 (lower is better)
Translates to: SSQDLCHCPPGLSHKENPSLRSC*FICGLI
Trigger: AATGAGACCGCAGATGAAGCAACAACTCCTCAAGCT...AGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTGTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR TCA 90 bp AAACATGTAGCAGTAACAGCTACCAAGAACAAAACAAAGACAGCTGCATGGCATAGAATCCGAGCTGTCTaGAGAGCTTTCTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: KHVAVTATKNKTKTAAWHRIRAV*RAFCFL
Trigger: AAGAAAGCAGAAAGCTCTTCAGACAGCTCGGATTCT...ATGCCATGCAGCTGTCTTTGTTTTGTTCTTGGTAGCTGTTACTGCTACATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CCA 90 bp GGAAAATTATTACCATGTGTTGTTTTGCTTTGCCTTAGGCAACAGCTAAGACTTTGCTCTCTGAAGCTTTaGCTGCTGCCTTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: GKLLPCVVLLCLRQQLRLCSLKL*LLPFQH
Trigger: ATGCTGGAAAGGCAGCAGCCAAAGCTTCAGAGAGCA...AAGTCTTAGCTGTTGCCTAAGGCAAAGCAAAACAACACATGGTAATAATTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
3UTR CAA 72 bp AGTGACTCAACCATGCAGGTACTTACCAGCCTGTCCTaGATGTTAATAAGAATCAAATACATCCATGAACTT +
Preference number: 4 (lower is better)
Translates to: SDSTMQVLTSLS*MLIRIKYIHEL
Trigger: AAGTTCATGGATGTATTTGATTCTTATTAACATCAAGGACAGGCTGGTAAGTACCTGCATGGTTGAGTCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CAA 90 bp AGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCGCGCAGCAGCTTTCTTaGGAGCCTGGGTTCCCGGGG +
Preference number: 5 (lower is better)
Translates to: RSLRGLQADTPQDLLHTVAQQLS*EPGFPG
Trigger: CCCCGGGAACCCAGGCTCCAAAGAAAGCTGCTGCGC...GACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp CCAGCCACGTCCCACCCCTGCCCTCACTGCCAATGGTCACATCCTACAGCTTTAGCGCAGCAGCTTTCTTaGGAGCCTGGGTTCCCGGGG +
Preference number: 5 (lower is better)
Translates to: PATSHPCPHCQWSHPTALAQQLS*EPGFPG
Trigger: CCCCGGGAACCCAGGCTCCAAAGAAAGCTGCTGCGC...TAAAGCTGTAGGATGTGACCATTGGCAGTGAGGGCAGGGGTGGGACGTGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS CCA 90 bp GCTGCTGCTGCTGCTGCTCTTGGCCTCTGCTTTCTTCCCAGGGGCTaGTGTAGAAACGGCTCCACCTGCTGCCTTCTTCTTAGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: AAAAAALGLCFLPRG*CRNGSTCCLLLSWG
Trigger: CCCCCAGCTAAGAAGAAGGCAGCAGGTGGAGCCGTTTCTACACCAGCCCCTGGGAAGAAAGCAGAGGCCAAGAGCAGCAGCAGCAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACGCGCAGCAGCTTTCTTaGGAGCCTGGGTTCCCGGGG +
Preference number: 5 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHAQQLS*EPGFPG
Trigger: CCCCGGGAACCCAGGCTCCAAAGAAAGCTGCTGCGC...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp AGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCTTCACTGGAGCTGCTTaGGCGGGTGTCTTGGAGACG +
Preference number: 5 (lower is better)
Translates to: RSLRGLQADTPQDLLHTVFTGAA*AGVLET
Trigger: CGTCTCCAAGACACCCGCCAAAGCAGCTCCAGTGAA...GACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp GCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCACGCGCAGCAGCTTTCTTaGGAGCCTGGGTTCCCGGGG +
Preference number: 5 (lower is better)
Translates to: APHRPCHNCLLTRSFWVHAQQLS*EPGFPG
Trigger: CCCCGGGAACCCAGGCTCCAAAGAAAGCTGCTGCGC...GTGGACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp AGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCTTTGGTACAGTCTTCTaGGGAGGTGCAGCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: RSLRGLQADTPQDLLHTVFGTVF*GGAAAF
Trigger: GAAGGCAGCTGCACCTCCCAAGAAGACTGTACCAAA...GACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp AAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCTTCACTGGAGCTGCTTaGGCGGGTGTCTTGGAGACG +
Preference number: 5 (lower is better)
Translates to: KRSLRGLQADTPQDLLHTFTGAA*AGVLET
Trigger: CGTCTCCAAGACACCCGCCAAAGCAGCTCCAGTGAA...GGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp AGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCGTTGTACTGACTGGCTaGGCAGGAGCTTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: RSLRGLQADTPQDLLHTVVVLTG*AGASSS
Trigger: TGAGGATGAAGCTCCTGCCAAGCCAGTCAGTACAAC...GACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp AAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCCCTTGGCCTTGGGGGTaGTGGCACTTTTCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: KRSLRGLQADTPQDLLHTPWPWG*WHFSWR
Trigger: CCTCCAAGAAAAGTGCCACAACCCCCAAGGCCAAGG...GGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp CCTGCTGCTGCTCCAGGTGCCCAGGAGATCCAGTGTATCTACTTCACACCAGGGGCAGTCACCTTGGCCTaGGGGGTTGTGGCACTTTTC +
Preference number: 5 (lower is better)
Translates to: PAAAPGAQEIQCIYFTPGAVTLA*GVVALF
Trigger: GAAAAGTGCCACAACCCCCAAGGCCAAGGTGACTGC...CCCTGGTGTGAAGTAGATACACTGGATCTCCTGGGCACCTGGAGCAGCAGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CAA 90 bp AAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGCAGTCACCTTGGCCTaGGGGGTTGTGGCACTTTTC +
Preference number: 5 (lower is better)
Translates to: KRSLRGLQADTPQDLLHTAVTLA*GVVALF
Trigger: GAAAAGTGCCACAACCCCCAAGGCCAAGGTGACTGC...GGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp CCTGCTGCTGCTCCAGGTGCCCAGGAGATCCAGTGTATCTACTTCACACCAGGGCTGCTGCTGCTGCTCTaGGCCTCTGCTTTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: PAAAPGAQEIQCIYFTPGLLLLL*ASAFFP
Trigger: TGGGAAGAAAGCAGAGGCCAAGAGCAGCAGCAGCAG...CCCTGGTGTGAAGTAGATACACTGGATCTCCTGGGCACCTGGAGCAGCAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CAA 90 bp AGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCTTGGCATCAAAGGAATaGTCCGCCACTCGAGAGTCC +
Preference number: 5 (lower is better)
Translates to: RSLRGLQADTPQDLLHTVLASKE*SATRES
Trigger: GGACTCTCGAGTGGCGGACAATTCCTTTGATGCCAA...GACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp AAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCTTCACCTTTGGGGCTTaGGTGGACCTGTTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: KRSLRGLQADTPQDLLHTFTFGA*VDLLSQ
Trigger: CTGGCTCAACAGGTCCACCAAAGCCCCAAAGGTGAA...GGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp CACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGGCAGTCACCTTGGCCTaGGGGGTTGTGGCACTTTTC +
Preference number: 5 (lower is better)
Translates to: HLRTCSTPSLSQLSPNTEAVTLA*GVVALF
Trigger: GAAAAGTGCCACAACCCCCAAGGCCAAGGTGACTGC...CTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp CACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGGCTTTAGCAGTCACCTaGGCCTTGGGGGTTGTGGCA +
Preference number: 5 (lower is better)
Translates to: HLRTCSTPSLSQLSPNTEALAVT*ALGVVA
Trigger: TGCCACAACCCCCAAGGCCAAGGTGACTGCTAAAGC...CTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACGCTTTAGCAGTCACCTaGGCCTTGGGGGTTGTGGCA +
Preference number: 5 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHALAVT*ALGVVA
Trigger: TGCCACAACCCCCAAGGCCAAGGTGACTGCTAAAGC...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTCTGCTGCTGCTGCTCTaGGCCTCTGCTTTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPLLLLL*ASAFFP
Trigger: TGGGAAGAAAGCAGAGGCCAAGAGCAGCAGCAGCAG...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp CACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGCTGCTGCTGCTGCTCTaGGCCTCTGCTTTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: HLRTCSTPSLSQLSPNTELLLLL*ASAFFP
Trigger: TGGGAAGAAAGCAGAGGCCAAGAGCAGCAGCAGCAG...CTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp GGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTCCAGCTGCACCTCGCTaGGCATCAAAGGAATTGTCC +
Preference number: 5 (lower is better)
Translates to: GLQADTPQDLLHTVLVTTPAAPR*ASKELS
Trigger: GGACAATTCCTTTGATGCCAAGCGAGGTGCAGCTGG...AGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS GCA 90 bp TCAGAATCGTCACTGCTGTCGTCACTGCTGTCTGCAGGCTGTGTCTaGGCAGCAGCTTTCTTTGGAGCCTGGGTTCCCGGGGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: SESSLLSSLLSAGCV*AAAFFGAWVPGDFF
Trigger: AAAGAAGTCCCCGGGAACCCAGGCTCCAAAGAAAGCTGCTGCGCAGACACAGCCTGCAGACAGCAGTGACGACAGCAGTGACGATTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS GCA 90 bp CTCTGCTTTCTTCCCAGGGGCTGGTGTAGAAACGGCTCCACCTGCTaGCTTCTTCTTAGCTGGGGGCTTAGGAGTCTTCTCCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LCFLPRGWCRNGSTC*LLLSWGLRSLLLLF
Trigger: GAAGAGGAGGAGAAGACTCCTAAGCCCCCAGCTAAGAAGAAGGCAGCAGGTGGAGCCGTTTCTACACCAGCCCCTGGGAAGAAAGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTTTCACCTTTGGGGCTTaGGTGGACCTGTTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPFTFGA*VDLLSQ
Trigger: CTGGCTCAACAGGTCCACCAAAGCCCCAAAGGTGAA...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp CACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGAGTCCCTGGGCTTTTTaGTCCTCGTCCTCACTGCTG +
Preference number: 5 (lower is better)
Translates to: HLRTCSTPSLSQLSPNTESPWAF*SSSSLL
Trigger: CAGCAGTGAGGACGAGGACAAAAAAGCCCAGGGACT...CTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp ATGCTAAGCAAGCACACTACCACCCAGCTATGCCTCCCTGCCTCCTGGCTAGTCCTGCTCTCTGAAGCTTaGGCTGCTGCCTTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: MLSKHTTTQLCLPASWLVLLSEA*AAAFPA
Trigger: TGCTGGAAAGGCAGCAGCCAAAGCTTCAGAGAGCAG...GACTAGCCAGGAGGCAGGGAGGCATAGCTGGGTGGTAGTGTGCTTGCTTAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CAA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACCTGCTCTCTGAAGCTTaGGCTGCTGCCTTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHLLSEA*AAAFPA
Trigger: TGCTGGAAAGGCAGCAGCCAAAGCTTCAGAGAGCAG...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp AAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCTTTGGTACAGTCTTCTaGGGAGGTGCAGCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: KRSLRGLQADTPQDLLHTFGTVF*GGAAAF
Trigger: GAAGGCAGCTGCACCTCCCAAGAAGACTGTACCAAA...GGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp AGCCACGTCCCACCCCTGCCCTCACTGCCAATGGTCACATCCTACAGCTTTATATTCACTGGAGCTGCTTaGGCGGGTGTCTTGGAGACG +
Preference number: 5 (lower is better)
Translates to: SHVPPLPSLPMVTSYSFIFTGAA*AGVLET
Trigger: CGTCTCCAAGACACCCGCCAAAGCAGCTCCAGTGAA...TATAAAGCTGTAGGATGTGACCATTGGCAGTGAGGGCAGGGGTGGGACGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CAA 90 bp GGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGTTCACTGGAGCTGCTTaGGCGGGTGTCTTGGAGACG +
Preference number: 5 (lower is better)
Translates to: GPAPHRPCHNCLLTRSFWFTGAA*AGVLET
Trigger: CGTCTCCAAGACACCCGCCAAAGCAGCTCCAGTGAA...CCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp GGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTTGTACTGACTGGCTaGGCAGGAGCTTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: GLQADTPQDLLHTVLVTTVVLTG*AGASSS
Trigger: TGAGGATGAAGCTCCTGCCAAGCCAGTCAGTACAAC...AGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp CACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGGGAGTGACAGCTGGCTaGGGACTCTTGGTTGTACTG +
Preference number: 5 (lower is better)
Translates to: HLRTCSTPSLSQLSPNTEGVTAG*GLLVVL
Trigger: CAGTACAACCAAGAGTCCCAAGCCAGCTGTCACTCC...CTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTGGAGTGACAGCTGGCTaGGGACTCTTGGTTGTACTG +
Preference number: 5 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPGVTAG*GLLVVL
Trigger: CAGTACAACCAAGAGTCCCAAGCCAGCTGTCACTCC...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp AAGCACACTACCACCCAGCTATGCCTCCCTGCCTCCTGGCTAGTCTGTATCAGTCCTTGGCCTTGGGGGTaGTGGCACTTTTCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: KHTTTQLCLPASWLVCISPWPWG*WHFSWR
Trigger: CCTCCAAGAAAAGTGCCACAACCCCCAAGGCCAAGG...ACTGATACAGACTAGCCAGGAGGCAGGGAGGCATAGCTGGGTGGTAGTGTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CAA 90 bp GCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCACGCAGTCACCTTGGCCTaGGGGGTTGTGGCACTTTTC +
Preference number: 5 (lower is better)
Translates to: APHRPCHNCLLTRSFWVHAVTLA*GVVALF
Trigger: GAAAAGTGCCACAACCCCCAAGGCCAAGGTGACTGC...GTGGACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp GGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGCTTTAGCAGTCACCTaGGCCTTGGGGGTTGTGGCA +
Preference number: 5 (lower is better)
Translates to: GPAPHRPCHNCLLTRSFWALAVT*ALGVVA
Trigger: TGCCACAACCCCCAAGGCCAAGGTGACTGCTAAAGC...CCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp GCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCACCTGCTGCTGCTGCTCTaGGCCTCTGCTTTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: APHRPCHNCLLTRSFWVHLLLLL*ASAFFP
Trigger: TGGGAAGAAAGCAGAGGCCAAGAGCAGCAGCAGCAG...GTGGACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp AAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCTTGGCATCAAAGGAATaGTCCGCCACTCGAGAGTCC +
Preference number: 5 (lower is better)
Translates to: KRSLRGLQADTPQDLLHTLASKE*SATRES
Trigger: GGACTCTCGAGTGGCGGACAATTCCTTTGATGCCAA...GGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTCCAGCTGCACCTCGCTaGGCATCAAAGGAATTGTCC +
Preference number: 5 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPPAAPR*ASKELS
Trigger: GGACAATTCCTTTGATGCCAAGCGAGGTGCAGCTGG...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp CACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGCCAGCTGCACCTCGCTaGGCATCAAAGGAATTGTCC +
Preference number: 5 (lower is better)
Translates to: HLRTCSTPSLSQLSPNTEPAAPR*ASKELS
Trigger: GGACAATTCCTTTGATGCCAAGCGAGGTGCAGCTGG...CTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp GGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTTTCACCTTTGGGGCTTaGGTGGACTTGAGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: GLQADTPQDLLHTVLVTTFTFGA*VDLSQK
Trigger: CTTCTGGCTCAAGTCCACCAAAGCCCCAAAGGTGAA...AGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223728.2
CDS CCA 90 bp AGGAGTTGTCACTGCCTTTGCTGCAGATGGCTTCGGAGTGACAGCTaGCTTGGGACTCTTGGTTGTACTGACTGGCTTGGCAGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: RSCHCLCCRWLRSDS*LGTLGCTDWLGRSF
Trigger: GAAGCTCCTGCCAAGCCAGTCAGTACAACCAAGAGTCCCAAGCCAGCTGTCACTCCGAAGCCATCTGCAGCAAAGGCAGTGACAACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp CCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCTTCACCTTTGGGGCTTaGGTGGACCTGTTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: PAPHRPCHNCLLTRSFWVFTFGA*VDLLSQ
Trigger: CTGGCTCAACAGGTCCACCAAAGCCCCAAAGGTGAA...GACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp CCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCAGTCCCTGGGCTTTTTaGTCCTCGTCCTCACTGCTG +
Preference number: 5 (lower is better)
Translates to: PAPHRPCHNCLLTRSFWVSPWAF*SSSSLL
Trigger: CAGCAGTGAGGACGAGGACAAAAAAGCCCAGGGACT...GACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp GCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCACAGTCCCTGGGCTTTTTaGTCCTCGTCCTCACTGCTG +
Preference number: 5 (lower is better)
Translates to: APHRPCHNCLLTRSFWVHSPWAF*SSSSLL
Trigger: CAGCAGTGAGGACGAGGACAAAAAAGCCCAGGGACT...GTGGACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp AGCCACGTCCCACCCCTGCCCTCACTGCCAATGGTCACATCCTACAGCTTTATACTGCTCTCTGAAGCTTaGGCTGCTGCCTTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: SHVPPLPSLPMVTSYSFILLSEA*AAAFPA
Trigger: TGCTGGAAAGGCAGCAGCCAAAGCTTCAGAGAGCAG...TATAAAGCTGTAGGATGTGACCATTGGCAGTGAGGGCAGGGGTGGGACGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CAA 90 bp GCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCACCTGCTCTCTGAAGCTTaGGCTGCTGCCTTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: APHRPCHNCLLTRSFWVHLLSEA*AAAFPA
Trigger: TGCTGGAAAGGCAGCAGCCAAAGCTTCAGAGAGCAG...GTGGACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp TTTATAATCCACTCCCTTGGCCCAGGAATCTCTCTGCTCTTTACTTCCTGCGGTGCGCAGCAGCTTTCTTaGGAGCCTGGGTTCCCGGGG +
Preference number: 5 (lower is better)
Translates to: FIIHSLGPGISLLFTSCGAQQLS*EPGFPG
Trigger: CCCCGGGAACCCAGGCTCCAAAGAAAGCTGCTGCGC...ACCGCAGGAAGTAAAGAGCAGAGAGATTCCTGGGCCAAGGGAGTGGATTATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CAA 90 bp AGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCTCTCTTCCTCAGAACTaGAATCAGAATCGTCACTGC +
Preference number: 5 (lower is better)
Translates to: RSLRGLQADTPQDLLHTVSLPQN*NQNRHC
Trigger: GCAGTGACGATTCTGATTCAAGTTCTGAGGAAGAGA...GACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTGTTGTACTGACTGGCTaGGCAGGAGCTTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPVVLTG*AGASSS
Trigger: TGAGGATGAAGCTCCTGCCAAGCCAGTCAGTACAAC...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp ACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTGCTTTAGCAGTCACCTaGGCCTTGGGGGTTGTGGCA +
Preference number: 5 (lower is better)
Translates to: TCSTPSLSQLSPNTEFLGALAVT*ALGVVA
Trigger: TGCCACAACCCCCAAGGCCAAGGTGACTGCTAAAGC...ACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp GGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGTTGCCTGAACCTGGCTaGGTCCCAGCTGCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: GPAPHRPCHNCLLTRSFWLPEPG*VPAAFF
Trigger: GAAAAAGGCAGCTGGGACCAAGCCAGGTTCAGGCAA...CCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp CACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTGGCATCAAAGGAATaGTCCGCCACTCGAGAGTCC +
Preference number: 5 (lower is better)
Translates to: HLRTCSTPSLSQLSPNTELASKE*SATRES
Trigger: GGACTCTCGAGTGGCGGACAATTCCTTTGATGCCAA...CTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTTTGGCATCAAAGGAATaGTCCGCCACTCGAGAGTCC +
Preference number: 5 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPLASKE*SATRES
Trigger: GGACTCTCGAGTGGCGGACAATTCCTTTGATGCCAA...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp AGCCACGTCCCACCCCTGCCCTCACTGCCAATGGTCACATCCTACAGCTTTATACCAGCTGCACCTCGCTaGGCATCAAAGGAATTGTCC +
Preference number: 5 (lower is better)
Translates to: SHVPPLPSLPMVTSYSFIPAAPR*ASKELS
Trigger: GGACAATTCCTTTGATGCCAAGCGAGGTGCAGCTGG...TATAAAGCTGTAGGATGTGACCATTGGCAGTGAGGGCAGGGGTGGGACGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CAA 90 bp CCTGCTGCTGCTCCAGGTGCCCAGGAGATCCAGTGTATCTACTTCACACCAGGGCACTCGCTGTCGAATTaGACGGAATTGACCTGGACA +
Preference number: 5 (lower is better)
Translates to: PAAAPGAQEIQCIYFTPGHSLSN*TELTWT
Trigger: TGTCCAGGTCAATTCCGTCAAATTCGACAGCGAGTG...CCCTGGTGTGAAGTAGATACACTGGATCTCCTGGGCACCTGGAGCAGCAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CAA 90 bp GCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCACTTCCCGGGGACTTCTTaGGTAAAGGAACAGAGGGTG +
Preference number: 5 (lower is better)
Translates to: APHRPCHNCLLTRSFWVHFPGTS*VKEQRV
Trigger: CACCCTCTGTTCCTTTACCAAAGAAGTCCCCGGGAA...GTGGACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp ACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTTTGCCTGAACCTGGCTaGGTCCCAGCTGCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: TCSTPSLSQLSPNTEFLGLPEPG*VPAAFF
Trigger: GAAAAAGGCAGCTGGGACCAAGCCAGGTTCAGGCAA...ACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp ATGCTAAGCAAGCACACTACCACCCAGCTATGCCTCCCTGCCTCCTGGCTAGTCTTCTGCTTCCGTTTTTaGCCTGAACCTGGCTTGGTC +
Preference number: 5 (lower is better)
Translates to: MLSKHTTTQLCLPASWLVFCFRF*PEPGLV
Trigger: GACCAAGCCAGGTTCAGGCAAAAAACGGAAGCAGAA...GACTAGCCAGGAGGCAGGGAGGCATAGCTGGGTGGTAGTGTGCTTGCTTAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CAA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACTTCTGCTTCCGTTTTTaGCCTGAACCTGGCTTGGTC +
Preference number: 5 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHFCFRF*PEPGLV
Trigger: GACCAAGCCAGGTTCAGGCAAAAAACGGAAGCAGAA...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp AAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCTGGTCACTGGTCCATTaGACTGTAACTTCACCTTTG +
Preference number: 5 (lower is better)
Translates to: KRSLRGLQADTPQDLLHTWSLVH*TVTSPL
Trigger: CAAAGGTGAAGTTACAGTCAAATGGACCAGTGACCA...GGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp CACTCCCTTGGCCCAGGAATCTCTCTGCTCTTTACTTCCTGCGGTGATAGAGATAGTCCCTGGGCTTTTTaGTCCTCGTCCTCACTGCTG +
Preference number: 5 (lower is better)
Translates to: HSLGPGISLLFTSCGDRDSPWAF*SSSSLL
Trigger: CAGCAGTGAGGACGAGGACAAAAAAGCCCAGGGACT...ATCTCTATCACCGCAGGAAGTAAAGAGCAGAGAGATTCCTGGGCCAAGGGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CAA 90 bp ACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTTTCCCGGGGACTTCTTaGGTAAAGGAACAGAGGGTG +
Preference number: 5 (lower is better)
Translates to: TCSTPSLSQLSPNTEFLGFPGTS*VKEQRV
Trigger: CACCCTCTGTTCCTTTACCAAAGAAGTCCCCGGGAA...ACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp GCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACTGCACTTCACTGGAGCTGCTTaGGCGGGTGTCTTGGAGACG +
Preference number: 5 (lower is better)
Translates to: AWHSHTRESCLPISRLLHFTGAA*AGVLET
Trigger: CGTCTCCAAGACACCCGCCAAAGCAGCTCCAGTGAA...GTGCAGTAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CAA 90 bp ACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTGTTGTACTGACTGGCTaGGCAGGAGCTTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: TCSTPSLSQLSPNTEFLGVVLTG*AGASSS
Trigger: TGAGGATGAAGCTCCTGCCAAGCCAGTCAGTACAAC...ACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp CAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACGCAGTCACCTTGGCCTaGGGGGTTGTGGCACTTTTC +
Preference number: 5 (lower is better)
Translates to: QLHGIHTLENPACQLVGYAVTLA*GVVALF
Trigger: GAAAAGTGCCACAACCCCCAAGGCCAAGGTGACTGC...GTAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CAA 90 bp GGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGTTCTGCTTCCGTTTTTaGCCTGAACCTGGCTTGGTC +
Preference number: 5 (lower is better)
Translates to: GPAPHRPCHNCLLTRSFWFCFRF*PEPGLV
Trigger: GACCAAGCCAGGTTCAGGCAAAAAACGGAAGCAGAA...CCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp ACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTTTGGCATCAAAGGAATaGTCCGCCACTCGAGAGTCC +
Preference number: 5 (lower is better)
Translates to: TCSTPSLSQLSPNTEFLGLASKE*SATRES
Trigger: GGACTCTCGAGTGGCGGACAATTCCTTTGATGCCAA...ACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp AGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTTCGAATTTGACGGAATaGACCTGGACAGAGATGGAG +
Preference number: 5 (lower is better)
Translates to: RLTHLRTCSTPSLSQLSPSNLTE*TWTEME
Trigger: CTCCATCTCTGTCCAGGTCAATTCCGTCAAATTCGA...AGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACTCGAATTTGACGGAATaGACCTGGACAGAGATGGAG +
Preference number: 5 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHSNLTE*TWTEME
Trigger: CTCCATCTCTGTCCAGGTCAATTCCGTCAAATTCGA...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp AGCCACGTCCCACCCCTGCCCTCACTGCCAATGGTCACATCCTACAGCTTTATACACTCGCTGTCGAATTaGACGGAATTGACCTGGACA +
Preference number: 5 (lower is better)
Translates to: SHVPPLPSLPMVTSYSFIHSLSN*TELTWT
Trigger: TGTCCAGGTCAATTCCGTCAAATTCGACAGCGAGTG...TATAAAGCTGTAGGATGTGACCATTGGCAGTGAGGGCAGGGGTGGGACGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CAA 90 bp GGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGCACTCGCTGTCGAATTaGACGGAATTGACCTGGACA +
Preference number: 5 (lower is better)
Translates to: GPAPHRPCHNCLLTRSFWHSLSN*TELTWT
Trigger: TGTCCAGGTCAATTCCGTCAAATTCGACAGCGAGTG...CCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS TCA 90 bp CTTGGCAGGAGCTTCATCCTCAGAACTGTCAGAATCCGAGCTGTCTaGAGAGCTTTCTGCTTTCTTCTTCACTGGAGCTGCTTTGGCGGG +
Preference number: 5 (lower is better)
Translates to: LGRSFILRTVRIRAV*RAFCFLLHWSCFGG
Trigger: CCCGCCAAAGCAGCTCCAGTGAAGAAGAAAGCAGAAAGCTCTTCAGACAGCTCGGATTCTGACAGTTCTGAGGATGAAGCTCCTGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS GCA 90 bp TTTCGCTGGTGTACCTGGTTTGGCTTCGGCTTTAGTCTGAGCTTTTaGTGCCACAGCTGCCTTTGGCTTCTGGGTCTGTGGTGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: FRWCTWFGFGFSLSF*CHSCLWLLGLWCFF
Trigger: GAAGAAACACCACAGACCCAGAAGCCAAAGGCAGCTGTGGCAGCAAAAGCTCAGACTAAAGCCGAAGCCAAACCAGGTACACCAGCGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACTCTCTTCCTCAGAACTaGAATCAGAATCGTCACTGC +
Preference number: 5 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHSLPQN*NQNRHC
Trigger: GCAGTGACGATTCTGATTCAAGTTCTGAGGAAGAGA...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp TTTATAATCCACTCCCTTGGCCCAGGAATCTCTCTGCTCTTTACTTCCTGCGGTGCTTTAGCAGTCACCTaGGCCTTGGGGGTTGTGGCA +
Preference number: 5 (lower is better)
Translates to: FIIHSLGPGISLLFTSCGALAVT*ALGVVA
Trigger: TGCCACAACCCCCAAGGCCAAGGTGACTGCTAAAGC...ACCGCAGGAAGTAAAGAGCAGAGAGATTCCTGGGCCAAGGGAGTGGATTATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CAA 90 bp GGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGTCGAATTTGACGGAATaGACCTGGACAGAGATGGAG +
Preference number: 5 (lower is better)
Translates to: GPAPHRPCHNCLLTRSFWSNLTE*TWTEME
Trigger: CTCCATCTCTGTCCAGGTCAATTCCGTCAAATTCGA...CCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp ACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCACTCGCTGTCGAATTaGACGGAATTGACCTGGACA +
Preference number: 5 (lower is better)
Translates to: TCSTPSLSQLSPNTEFLGHSLSN*TELTWT
Trigger: TGTCCAGGTCAATTCCGTCAAATTCGACAGCGAGTG...ACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp TTTATAATCCACTCCCTTGGCCCAGGAATCTCTCTGCTCTTTACTTCCTGCGGTTTCACCTTTGGGGCTTaGGTGGACCTGTTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: FIIHSLGPGISLLFTSCGFTFGA*VDLLSQ
Trigger: CTGGCTCAACAGGTCCACCAAAGCCCCAAAGGTGAA...ACCGCAGGAAGTAAAGAGCAGAGAGATTCCTGGGCCAAGGGAGTGGATTATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165017.2
CDS-3UTR CAA 90 bp ACAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACTGCTCTCTGAAGCTTaGGCTGCTGCCTTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: TAAWHSHTRESCLPISRLLLSEA*AAAFPA
Trigger: TGCTGGAAAGGCAGCAGCCAAAGCTTCAGAGAGCAG...TAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CAA 90 bp CAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACTTTGGTACAGTCTTCTaGGGAGGTGCAGCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: QLHGIHTLENPACQLVGYFGTVF*GGAAAF
Trigger: GAAGGCAGCTGCACCTCCCAAGAAGACTGTACCAAA...GTAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CAA 90 bp CAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACTTCCCGGGGACTTCTTaGGTAAAGGAACAGAGGGTG +
Preference number: 5 (lower is better)
Translates to: QLHGIHTLENPACQLVGYFPGTS*VKEQRV
Trigger: CACCCTCTGTTCCTTTACCAAAGAAGTCCCCGGGAA...GTAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CAA 90 bp ACAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTAGGAGTGACAGCTGGCTaGGGACTCTTGGTTGTACTG +
Preference number: 5 (lower is better)
Translates to: TAAWHSHTRESCLPISRLGVTAG*GLLVVL
Trigger: CAGTACAACCAAGAGTCCCAAGCCAGCTGTCACTCC...TAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CAA 90 bp CACAAGACTTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTCCAGCCTTGGCCTTGGGGGTaGTGGCACTTTTCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: HKTYVIAHQGFHIKRILQPWPWG*WHFSWR
Trigger: CCTCCAAGAAAAGTGCCACAACCCCCAAGGCCAAGG...CTGGAGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CAA 90 bp TTTATAATCCACTCCCTTGGCCCAGGAATCTCTCTGCTCTTTACTTCCTGCGGTTTGCCTGAACCTGGCTaGGTCCCAGCTGCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: FIIHSLGPGISLLFTSCGLPEPG*VPAAFF
Trigger: GAAAAAGGCAGCTGGGACCAAGCCAGGTTCAGGCAA...ACCGCAGGAAGTAAAGAGCAGAGAGATTCCTGGGCCAAGGGAGTGGATTATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CAA 90 bp GGACTGCAGGCTGACACACCTCAGGACCTGCTCCACACCGTCCTTGTCACAACTCTTAACTTTCTTAGCTaGAGGAGTTGTTGCTTCATC +
Preference number: 5 (lower is better)
Translates to: GLQADTPQDLLHTVLVTTLNFLS*RSCCFI
Trigger: GATGAAGCAACAACTCCTCAAGCTAAGAAAGTTAAG...AGTTGTGACAAGGACGGTGTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp ACAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTACCAGCTGCACCTCGCTaGGCATCAAAGGAATTGTCC +
Preference number: 5 (lower is better)
Translates to: TAAWHSHTRESCLPISRLPAAPR*ASKELS
Trigger: GGACAATTCCTTTGATGCCAAGCGAGGTGCAGCTGG...TAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CAA 90 bp CAATTTTATCCCCCAAAGTTGGTAGATCCACGCTGGCTTCTAGAAGCTTTGGTGGGAGTGACAGCTGGCTaGGGACTCTTGGTTGTACTG +
Preference number: 5 (lower is better)
Translates to: QFYPPKLVDPRWLLEALVGVTAG*GLLVVL
Trigger: CAGTACAACCAAGAGTCCCAAGCCAGCTGTCACTCC...CACCAAAGCTTCTAGAAGCCAGCGTGGATCTACCAACTTTGGGGGATAAAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CAA 90 bp CAAGACTTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTCCAGTACCTTGGCCTTGGGGGTaGTGGCACTTTTCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: QDLCHCPPGLSHKENPPVPWPWG*WHFSWR
Trigger: CCTCCAAGAAAAGTGCCACAACCCCCAAGGCCAAGG...TACTGGAGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CAA 90 bp CAAGACTTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTCCAGTACTGCTGCTGCTGCTCTaGGCCTCTGCTTTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: QDLCHCPPGLSHKENPPVLLLLL*ASAFFP
Trigger: TGGGAAGAAAGCAGAGGCCAAGAGCAGCAGCAGCAG...TACTGGAGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CAA 90 bp GGCCCAATGGATGAAGATGAGCACAGAGTATGCTTAGCAGACAATCATCACAAGTTGCCTGAACCTGGCTaGGTCCCAGCTGCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: GPMDEDEHRVCLADNHHKLPEPG*VPAAFF
Trigger: GAAAAAGGCAGCTGGGACCAAGCCAGGTTCAGGCAA...CTTGTGATGATTGTCTGCTAAGCATACTCTGTGCTCATCTTCATCCATTGGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CAA 90 bp AGAAAAAGGAGCCTGAGAGGACTGCAGGCTGACACACCTCAGGACCTGCTCCACCTTAACTTTCTTAGCTaGAGGAGTTGTTGCTTCATC +
Preference number: 5 (lower is better)
Translates to: RKRSLRGLQADTPQDLLHLNFLS*RSCCFI
Trigger: GATGAAGCAACAACTCCTCAAGCTAAGAAAGTTAAG...GTGGAGCAGGTCCTGAGGTGTGTCAGCCTGCAGTCCTCTCAGGCTCCTTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp ATGCTAAGCAAGCACACTACCACCCAGCTATGCCTCCCTGCCTCCTGGCTAGTCCTTAACTTTCTTAGCTaGAGGAGTTGTTGCTTCATC +
Preference number: 5 (lower is better)
Translates to: MLSKHTTTQLCLPASWLVLNFLS*RSCCFI
Trigger: GATGAAGCAACAACTCCTCAAGCTAAGAAAGTTAAG...GACTAGCCAGGAGGCAGGGAGGCATAGCTGGGTGGTAGTGTGCTTGCTTAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CAA 90 bp CACAAGACTTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTCCAGTTTGGTACAGTCTTCTaGGGAGGTGCAGCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: HKTYVIAHQGFHIKRILQFGTVF*GGAAAF
Trigger: GAAGGCAGCTGCACCTCCCAAGAAGACTGTACCAAA...CTGGAGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CAA 90 bp GGACCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGCTTAACTTTCTTAGCTaGAGGAGTTGTTGCTTCATC +
Preference number: 5 (lower is better)
Translates to: GPAPHRPCHNCLLTRSFWLNFLS*RSCCFI
Trigger: GATGAAGCAACAACTCCTCAAGCTAAGAAAGTTAAG...CCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp CCTGCTCCACACCGTCCTTGTCACAACTGTCTCCTAACACGGAGTTTCTGGGTCCTTAACTTTCTTAGCTaGAGGAGTTGTTGCTTCATC +
Preference number: 5 (lower is better)
Translates to: PAPHRPCHNCLLTRSFWVLNFLS*RSCCFI
Trigger: GATGAAGCAACAACTCCTCAAGCTAAGAAAGTTAAG...GACCCAGAAACTCCGTGTTAGGAGACAGTTGTGACAAGGACGGTGTGGAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS-3UTR CAA 90 bp TCATCACAAGACTTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTAGTCCCTGGGCTTTTTaGTCCTCGTCCTCACTGCTG +
Preference number: 5 (lower is better)
Translates to: SSQDLCHCPPGLSHKENPSPWAF*SSSSLL
Trigger: CAGCAGTGAGGACGAGGACAAAAAAGCCCAGGGACT...AGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTGTGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CAA 90 bp AGCAGTAACAGCTACCAAGAACAAAACAAAGACAGCTGCATGGCATTCACACACTTCCCGGGGACTTCTTaGGTAAAGGAACAGAGGGTG +
Preference number: 5 (lower is better)
Translates to: SSNSYQEQNKDSCMAFTHFPGTS*VKEQRV
Trigger: CACCCTCTGTTCCTTTACCAAAGAAGTCCCCGGGAA...GTGTGTGAATGCCATGCAGCTGTCTTTGTTTTGTTCTTGGTAGCTGTTACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CAA 90 bp AGCAGTAACAGCTACCAAGAACAAAACAAAGACAGCTGCATGGCATTCACACACGTTGTACTGACTGGCTaGGCAGGAGCTTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: SSNSYQEQNKDSCMAFTHVVLTG*AGASSS
Trigger: TGAGGATGAAGCTCCTGCCAAGCCAGTCAGTACAAC...GTGTGTGAATGCCATGCAGCTGTCTTTGTTTTGTTCTTGGTAGCTGTTACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CAA 90 bp TCATCACAAGACTTATGTCATTGCCCACCAGGGCTTTCACATAAAGAGAATCCTGGAGTGACAGCTGGCTaGGGACTCTTGGTTGTACTG +
Preference number: 5 (lower is better)
Translates to: SSQDLCHCPPGLSHKENPGVTAG*GLLVVL
Trigger: CAGTACAACCAAGAGTCCCAAGCCAGCTGTCACTCC...AGGATTCTCTTTATGTGAAAGCCCTGGTGGGCAATGACATAAGTCTTGTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CAA 90 bp CAATTTTATCCCCCAAAGTTGGTAGATCCACGCTGGCTTCTAGAAGCTTTGGTGTTCTGCTTCCGTTTTTaGCCTGAACCTGGCTTGGTC +
Preference number: 5 (lower is better)
Translates to: QFYPPKLVDPRWLLEALVFCFRF*PEPGLV
Trigger: GACCAAGCCAGGTTCAGGCAAAAAACGGAAGCAGAA...CACCAAAGCTTCTAGAAGCCAGCGTGGATCTACCAACTTTGGGGGATAAAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CAA 90 bp GGCCCAATGGATGAAGATGAGCACAGAGTATGCTTAGCAGACAATCATCACAAGTTCTGCTTCCGTTTTTaGCCTGAACCTGGCTTGGTC +
Preference number: 5 (lower is better)
Translates to: GPMDEDEHRVCLADNHHKFCFRF*PEPGLV
Trigger: GACCAAGCCAGGTTCAGGCAAAAAACGGAAGCAGAA...CTTGTGATGATTGTCTGCTAAGCATACTCTGTGCTCATCTTCATCCATTGGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CAA 90 bp AAGACACAGAACTTTGACCATGCAGCCTTCCACAAGGAGCTGCCACAGCTTTTATCGAATTTGACGGAATaGACCTGGACAGAGATGGAG +
Preference number: 5 (lower is better)
Translates to: KTQNFDHAAFHKELPQLLSNLTE*TWTEME
Trigger: CTCCATCTCTGTCCAGGTCAATTCCGTCAAATTCGA...TAAAAGCTGTGGCAGCTCCTTGTGGAAGGCTGCATGGTCAAAGTTCTGTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
CDS-3UTR CAA 90 bp CAATTTTATCCCCCAAAGTTGGTAGATCCACGCTGGCTTCTAGAAGCTTTGGTGCACTCGCTGTCGAATTaGACGGAATTGACCTGGACA +
Preference number: 5 (lower is better)
Translates to: QFYPPKLVDPRWLLEALVHSLSN*TELTWT
Trigger: TGTCCAGGTCAATTCCGTCAAATTCGACAGCGAGTG...CACCAAAGCTTCTAGAAGCCAGCGTGGATCTACCAACTTTGGGGGATAAAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CAA 90 bp ACAGCTGCATGGCATTCACACACTCGAGAATCCTGCCTGCCAATTAGTAGGTTATCTCTTCCTCAGAACTaGAATCAGAATCGTCACTGC +
Preference number: 5 (lower is better)
Translates to: TAAWHSHTRESCLPISRLSLPQN*NQNRHC
Trigger: GCAGTGACGATTCTGATTCAAGTTCTGAGGAAGAGA...TAACCTACTAATTGGCAGGCAGGATTCTCGAGTGTGTGAATGCCATGCAGCTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS-3UTR CAA 90 bp AAACATGTAGCAGTAACAGCTACCAAGAACAAAACAAAGACAGCTGCATGGCATTTGCCTGAACCTGGCTaGGTCCCAGCTGCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: KHVAVTATKNKTKTAAWHLPEPG*VPAAFF
Trigger: GAAAAAGGCAGCTGGGACCAAGCCAGGTTCAGGCAA...ATGCCATGCAGCTGTCTTTGTTTTGTTCTTGGTAGCTGTTACTGCTACATGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165017.2
ENSMUST00000223728.2
ENSMUST00000225780.2
CDS GCA 72 bp GCTGCTGCTGCTGCTGCTGCTGCTGCTCTTGGCCTCTaGTTTCTTCCCAGGGGCTGGTGTAGAAACGGCTCC +
Preference number: 6 (lower is better)
Translates to: AAAAAAAAALGL*FLPRGWCRNGS
Trigger: GGAGCCGTTTCTACACCAGCCCCTGGGAAGAAAGCAGAGGCCAAGAGCAGCAGCAGCAGCAGCAGCAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS GCA 72 bp CTGCCTTCTTCTCTTCCTCTGAGTCATCGCTGCTGCTaGTGCTGCTGCTGCTGGCGGCTGCTTTGCCATTGG +
Preference number: 6 (lower is better)
Translates to: LPSSLPLSHRCC*CCCCWRLLCHW
Trigger: CCAATGGCAAAGCAGCCGCCAGCAGCAGCAGCAGCAGCAGCAGCGATGACTCAGAGGAAGAGAAGAAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS GCA 72 bp CTTCACTGGAATCTTCGGAGCTGCTGCTGCTGCTGCTaGTGCTGCTCTTGGCCTCTGCTTTCTTCCCAGGGG +
Preference number: 6 (lower is better)
Translates to: LHWNLRSCCCCC*CCSWPLLSSQG
Trigger: CCCCTGGGAAGAAAGCAGAGGCCAAGAGCAGCAGCAGCAGCAGCAGCAGCAGCTCCGAAGATTCCAGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS CCA 72 bp TTGTGGCACTTTTCTTGGAGGCCTCCTCCTCCTCGCTaGAGCTGCTTTCCTCCTCGCTGGAGCTGCTGTCAG +
Preference number: 6 (lower is better)
Translates to: LWHFSWRPPPPR*SCFPPRWSCCQ
Trigger: CTGACAGCAGCTCCAGCGAGGAGGAAAGCAGCTCCAGCGAGGAGGAGGAGGCCTCCAAGAAAAGTGCCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS CAA 72 bp TCTTCGGAGCTGCTGCTGCTGCTGCTGCTGCTGCTCTaGGCCTCTGCTTTCTTCCCAGGGGCTGGTGTAGAA +
Preference number: 6 (lower is better)
Translates to: SSELLLLLLLLL*ASAFFPGAGVE
Trigger: TTCTACACCAGCCCCTGGGAAGAAAGCAGAGGCCAAGAGCAGCAGCAGCAGCAGCAGCAGCAGCTCCGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS CAA 90 bp TCTGAGTCATCGCTGCTGCTGCTGCTGCTGCTGCTGGCGGCTGCTTaGCCATTGGCTACCTTAGGCTGTGCTTTCGCTGGTGTACCTGGT +
Preference number: 6 (lower is better)
Translates to: SESSLLLLLLLLAAA*PLATLGCAFAGVPG
Trigger: ACCAGGTACACCAGCGAAAGCACAGCCTAAGGTAGCCAATGGCAAAGCAGCCGCCAGCAGCAGCAGCAGCAGCAGCAGCGATGACTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS CAA 90 bp TCACTGGAATCTTCGGAGCTGCTGCTGCTGCTGCTGCTGCTGCTCTaGGCCTCTGCTTTCTTCCCAGGGGCTGGTGTAGAAACGGCTCCA +
Preference number: 6 (lower is better)
Translates to: SLESSELLLLLLLLL*ASAFFPGAGVETAP
Trigger: TGGAGCCGTTTCTACACCAGCCCCTGGGAAGAAAGCAGAGGCCAAGAGCAGCAGCAGCAGCAGCAGCAGCAGCTCCGAAGATTCCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS GCA 72 bp TCTTCTCTTCCTCTGAGTCATCGCTGCTGCTGCTGCTaGTGCTGCTGGCGGCTGCTTTGCCATTGGCTACCT +
Preference number: 6 (lower is better)
Translates to: SSLPLSHRCCCC*CCWRLLCHWLP
Trigger: AGGTAGCCAATGGCAAAGCAGCCGCCAGCAGCAGCAGCAGCAGCAGCAGCGATGACTCAGAGGAAGAGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS GCA 72 bp CCTTCTTCTCTTCCTCTGAGTCATCGCTGCTGCTGCTaGTGCTGCTGCTGGCGGCTGCTTTGCCATTGGCTA +
Preference number: 6 (lower is better)
Translates to: PSSLPLSHRCCC*CCCWRLLCHWL
Trigger: TAGCCAATGGCAAAGCAGCCGCCAGCAGCAGCAGCAGCAGCAGCAGCGATGACTCAGAGGAAGAGAAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS GCA 72 bp TCTGTCCCTCCTCCTCTTCACTGGAAGAATCCTCACTaGTGGAGCTCTTCTGGGTGGGGGCGGCAGCTACTT +
Preference number: 6 (lower is better)
Translates to: SVPPPLHWKNPH*WSSSGWGRQLL
Trigger: AAGTAGCTGCCGCCCCCACCCAGAAGAGCTCCAGCAGTGAGGATTCTTCCAGTGAAGAGGAGGAGGGACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS GCA 72 bp CCTCTTCACTGGAATCTTCGGAGCTGCTGCTGCTGCTaGTGCTGCTGCTCTTGGCCTCTGCTTTCTTCCCAG +
Preference number: 6 (lower is better)
Translates to: PLHWNLRSCCCC*CCCSWPLLSSQ
Trigger: CTGGGAAGAAAGCAGAGGCCAAGAGCAGCAGCAGCAGCAGCAGCAGCAGCTCCGAAGATTCCAGTGAAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS GCA 72 bp GCTGGCGGCTGCTTTGCCATTGGCTACCTTAGGCTGTaGTTTCGCTGGTGTACCTGGTTTGGCTTCGGCTTT +
Preference number: 6 (lower is better)
Translates to: AGGCFAIGYLRL*FRWCTWFGFGF
Trigger: AAAGCCGAAGCCAAACCAGGTACACCAGCGAAAGCACAGCCTAAGGTAGCCAATGGCAAAGCAGCCGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS CAA 72 bp GCAGATGGCTTCGGAGTGACAGCTGGCTTGGGACTCTaGGTTGTACTGACTGGCTTGGCAGGAGCTTCATCC +
Preference number: 6 (lower is better)
Translates to: ADGFGVTAGLGL*VVLTGLAGASS
Trigger: GGATGAAGCTCCTGCCAAGCCAGTCAGTACAACCAAGAGTCCCAAGCCAGCTGTCACTCCGAAGCCATCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS CAA 72 bp GCCTTTGCTGCAGATGGCTTCGGAGTGACAGCTGGCTaGGGACTCTTGGTTGTACTGACTGGCTTGGCAGGA +
Preference number: 6 (lower is better)
Translates to: AFAADGFGVTAG*GLLVVLTGLAG
Trigger: TCCTGCCAAGCCAGTCAGTACAACCAAGAGTCCCAAGCCAGCTGTCACTCCGAAGCCATCTGCAGCAAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS CAA 90 bp GTTGTCACTGCCTTTGCTGCAGATGGCTTCGGAGTGACAGCTGGCTaGGGACTCTTGGTTGTACTGACTGGCTTGGCAGGAGCTTCATCC +
Preference number: 6 (lower is better)
Translates to: VVTAFAADGFGVTAG*GLLVVLTGLAGASS
Trigger: GGATGAAGCTCCTGCCAAGCCAGTCAGTACAACCAAGAGTCCCAAGCCAGCTGTCACTCCGAAGCCATCTGCAGCAAAGGCAGTGACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS GCA 72 bp TTTCTTCCCAGGGGCTGGTGTAGAAACGGCTCCACCTaGTGCCTTCTTCTTAGCTGGGGGCTTAGGAGTCTT +
Preference number: 6 (lower is better)
Translates to: FLPRGWCRNGST*CLLLSWGLRSL
Trigger: AAGACTCCTAAGCCCCCAGCTAAGAAGAAGGCAGCAGGTGGAGCCGTTTCTACACCAGCCCCTGGGAAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS CCA 72 bp TTGGCTTCTGGGTCTGTGGTGTTTCTTCCTCTGAGCTaGAGTCCGAATCCGAGTCTGAGTCCGACTCAGAGC +
Preference number: 6 (lower is better)
Translates to: LASGSVVFLPLS*SPNPSLSPTQS
Trigger: GCTCTGAGTCGGACTCAGACTCGGATTCGGACTCCAGCTCAGAGGAAGAAACACCACAGACCCAGAAGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS CAA 90 bp ACCAGCGCCGGTCGCTTTTGCAAATTTACTGGCCACCTCCGAGAGTaGGCTATCCCGCAGAAATCTGAGCACAAGGGGATAAAGGTCGCT +
Preference number: 6 (lower is better)
Translates to: TSAGRFCKFTGHLRE*AIPQKSEHKGIKVA
Trigger: AGCGACCTTTATCCCCTTGTGCTCAGATTTCTGCGGGATAGCCAACTCTCGGAGGTGGCCAGTAAATTTGCAAAAGCGACCGGCGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224490.2
CDS GCA 72 bp ACCTGGTTTGGCTTCGGCTTTAGTCTGAGCTTTTGCTaGCACAGCTGCCTTTGGCTTCTGGGTCTGTGGTGT +
Preference number: 6 (lower is better)
Translates to: TWFGFGFSLSFC*HSCLWLLGLWC
Trigger: ACACCACAGACCCAGAAGCCAAAGGCAGCTGTGGCAGCAAAAGCTCAGACTAAAGCCGAAGCCAAACCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS GCA 72 bp TGTACCTGGTTTGGCTTCGGCTTTAGTCTGAGCTTTTaGTGCCACAGCTGCCTTTGGCTTCTGGGTCTGTGG +
Preference number: 6 (lower is better)
Translates to: CTWFGFGFSLSF*CHSCLWLLGLW
Trigger: CCACAGACCCAGAAGCCAAAGGCAGCTGTGGCAGCAAAAGCTCAGACTAAAGCCGAAGCCAAACCAGGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS CCA 72 bp TCTTCATGGGTTGTCTCTGTCCCTCCTCCTCTTCACTaGAAGAATCCTCACTGCTGGAGCTCTTCTGGGTGG +
Preference number: 6 (lower is better)
Translates to: SSWVVSVPPPLH*KNPHCWSSSGW
Trigger: CCACCCAGAAGAGCTCCAGCAGTGAGGATTCTTCCAGTGAAGAGGAGGAGGGACAGAGACAACCCATGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS CCA 72 bp AGGTTGCTTAGGAGTTGTCACTGCCTTTGCTGCAGATaGCTTCGGAGTGACAGCTGGCTTGGGACTCTTGGT +
Preference number: 6 (lower is better)
Translates to: RLLRSCHCLCCR*LRSDSWLGTLG
Trigger: ACCAAGAGTCCCAAGCCAGCTGTCACTCCGAAGCCATCTGCAGCAAAGGCAGTGACAACTCCTAAGCAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS CCA 72 bp TGTAGAAACGGCTCCACCTGCTGCCTTCTTCTTAGCTaGGGGCTTAGGAGTCTTCTCCTCCTCTTCACTGCT +
Preference number: 6 (lower is better)
Translates to: CRNGSTCCLLLS*GLRSLLLLFTA
Trigger: AGCAGTGAAGAGGAGGAGAAGACTCCTAAGCCCCCAGCTAAGAAGAAGGCAGCAGGTGGAGCCGTTTCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS CAA 90 bp TGTAGCGCCGGTCGCTTTTGCAAATTTACTGGCCACCTCCGAGAGTaGGCTATCCCGCAGAAATCTGAGCACAAGGGGATAAAGGTCGCT +
Preference number: 6 (lower is better)
Translates to: CSAGRFCKFTGHLRE*AIPQKSEHKGIKVA
Trigger: AGCGACCTTTATCCCCTTGTGCTCAGATTTCTGCGGGATAGCCAACTCTCGGAGGTGGCCAGTAAATTTGCAAAAGCGACCGGCGCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000223741.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS CAA 72 bp CAGCTTTCTTTGGAGCCTGGGTTCCCGGGGACTTCTTaGGTAAAGGAACAGAGGGTGGTGGAACTGAACTGT +
Preference number: 6 (lower is better)
Translates to: QLSLEPGFPGTS*VKEQRVVELNC
Trigger: ACAGTTCAGTTCCACCACCCTCTGTTCCTTTACCAAAGAAGTCCCCGGGAACCCAGGCTCCAAAGAAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS CAA 72 bp GAAGAGCTTTCTGCTTTCTTCTTCACTGGAGCTGCTTaGGCGGGTGTCTTGGAGACGACCGTCTTAGCTGGA +
Preference number: 6 (lower is better)
Translates to: EELSAFFFTGAA*AGVLETTVLAG
Trigger: TCCAGCTAAGACGGTCGTCTCCAAGACACCCGCCAAAGCAGCTCCAGTGAAGAAGAAAGCAGAAAGCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS CCA 72 bp ATTGGCTACCTTAGGCTGTGCTTTCGCTGGTGTACCTaGTTTGGCTTCGGCTTTAGTCTGAGCTTTTGCTGC +
Preference number: 6 (lower is better)
Translates to: IGYLRLCFRWCT*FGFGFSLSFCC
Trigger: GCAGCAAAAGCTCAGACTAAAGCCGAAGCCAAACCAGGTACACCAGCGAAAGCACAGCCTAAGGTAGCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS CAA 72 bp GTTGCTTCATCTGCGGTCTCATTCTGCTTCCGTTTTTaGCCTGAACCTGGCTTGGTCCCAGCTGCCTTTTTC +
Preference number: 6 (lower is better)
Translates to: VASSAVSFCFRF*PEPGLVPAAFF
Trigger: GAAAAAGGCAGCTGGGACCAAGCCAGGTTCAGGCAAAAAACGGAAGCAGAATGAGACCGCAGATGAAGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS GCA 72 bp TTTTCTCTTCCTCAGAACTTGAATCAGAATCGTCACTaGTGTCGTCACTGCTGTCTGCAGGCTGTGTCTGCG +
Preference number: 6 (lower is better)
Translates to: FSLPQNLNQNRH*CRHCCLQAVSA
Trigger: CGCAGACACAGCCTGCAGACAGCAGTGACGACAGCAGTGACGATTCTGATTCAAGTTCTGAGGAAGAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS TCA 72 bp AGCTTCATCCTCAGAACTGTCAGAATCCGAGCTGTCTaGAGAGCTTTCTGCTTTCTTCTTCACTGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: SFILRTVRIRAV*RAFCFLLHWSC
Trigger: GCAGCTCCAGTGAAGAAGAAAGCAGAAAGCTCTTCAGACAGCTCGGATTCTGACAGTTCTGAGGATGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS TCA 72 bp AACGTATTGGGGGTCTCGAGCTTAACTTTCTTAGCTTaGGGAGTTGTTGCTTCATCTGCGGTCTCATTCTGC +
Preference number: 6 (lower is better)
Translates to: NVLGVSSLTFLA*GVVASSAVSFC
Trigger: GCAGAATGAGACCGCAGATGAAGCAACAACTCCTCAAGCTAAGAAAGTTAAGCTCGAGACCCCCAATACGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2
CDS CAA 72 bp AAACGTATTGGGGGTCTCGAGCTTAACTTTCTTAGCTaGAGGAGTTGTTGCTTCATCTGCGGTCTCATTCTG +
Preference number: 6 (lower is better)
Translates to: KRIGGLELNFLS*RSCCFICGLIL
Trigger: CAGAATGAGACCGCAGATGAAGCAACAACTCCTCAAGCTAAGAAAGTTAAGCTCGAGACCCCCAATACGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000165017.2
ENSMUST00000223683.2
ENSMUST00000223728.2
ENSMUST00000225780.2
ENSMUST00000235620.2