Pregenerated sensors for NOL9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028948Ensembl transcript IDs: ENSMUST00000084116.13, ENSMUST00000103197.5, ENSMUST00000131696.3
Found 215 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCGGCAGCCACACAGCCCCACTCACCACAGCCCACGCAGTCTGCTaGCTCGGCCTGGGACGAGGCATCCCGGGAGCAAAGTCTCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: LGSHTAPLTTAHAVC*LGLGRGIPGAKSLH Trigger: ATGGAGAGACTTTGCTCCCGGGATGCCTCGTCCCAGGCCGAGTCAGCAGACTGCGTGGGCTGTGGTGAGTGGGGCTGTGTGGCTGCCGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR TCA 90 bp | TCAGAGGGAAGACACTGGAGGGGCACAGCACACTTTCCAGTTCCGTaGACAGCGGGCAGGAGCAGGAGCTCGGCAGCCACACAGCCCCAC | + |
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Preference number: 1 (lower is better) Translates to: SEGRHWRGTAHFPVP*TAGRSRSSAATQPH Trigger: GTGGGGCTGTGTGGCTGCCGAGCTCCTGCTCCTGCCCGCTGTTCACGGAACTGGAAAGTGTGCTGTGCCCCTCCAGTGTCTTCCCTCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR GCA 90 bp | CTCAACACGCCTCTCACTGAGCCTGCTCAGGCCCCCGGCAGTCTGTaGGCTGTACATGAGAACCTGCGGGTCAGCCTGCTGCCCAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: LNTPLTEPAQAPGSL*AVHENLRVSLLPSF Trigger: GAAACTGGGCAGCAGGCTGACCCGCAGGTTCTCATGTACAGCGCACAGACTGCCGGGGGCCTGAGCAGGCTCAGTGAGAGGCGTGTTGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR GCA 90 bp | TTCAAACTCTCTGCGAGGCAGGAGAGCCAACGGTGCCCAGAGACCTaGCTGGGCAGCAGGCTAAGAGCCTCCTCCCTCCCAGAAAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: FKLSARQESQRCPET*LGSRLRASSLPERL Trigger: GAGCCTTTCTGGGAGGGAGGAGGCTCTTAGCCTGCTGCCCAGGCAGGTCTCTGGGCACCGTTGGCTCTCCTGCCTCGCAGAGAGTTTGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR TCA 90 bp | GCTAAGAGCCTCCTCCCTCCCAGAAAGGCTCACCACAAGCTCAAGTaGGACACAGACTGGGCGAGGGGGCGGTGGGGACCAGTTAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: AKSLLPPRKAHHKLK*DTDWARGRWGPVSE Trigger: CTCACTAACTGGTCCCCACCGCCCCCTCGCCCAGTCTGTGTCTCACTTGAGCTTGTGGTGAGCCTTTCTGGGAGGGAGGAGGCTCTTAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR CCA 90 bp | CCGACACCAGGCATGTATGTGTCCACTCCAGGCTGGAGGGCCCCATaGCAGTATCCACTGCCTCAAGGAAGGGGCAGTGAGAGCAAACCC | + |
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Preference number: 1 (lower is better) Translates to: PTPGMYVSTPGWRAP*QYPLPQGRGSESKP Trigger: GGGTTTGCTCTCACTGCCCCTTCCTTGAGGCAGTGGATACTGCCATGGGGCCCTCCAGCCTGGAGTGGACACATACATGCCTGGTGTCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR CCA 90 bp | ATCCTGCAAAGGCCGACCCAGCTGGCATTCACAGCATACAGTATGTaGGTAGGCGCAACGTCGGCATGCAAGACCCGGATAGCGACGGCA | + |
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Preference number: 1 (lower is better) Translates to: ILQRPTQLAFTAYSM*VGATSACKTRIATA Trigger: TGCCGTCGCTATCCGGGTCTTGCATGCCGACGTTGCGCCTACCCACATACTGTATGCTGTGAATGCCAGCTGGGTCGGCCTTTGCAGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
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| 3UTR GCA 90 bp | TGTATGTGTCCACTCCAGGCTGGAGGGCCCCATGGCAGTATCCACTaGCTCAAGGAAGGGGCAGTGAGAGCAAACCCAGACTTAAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: CMCPLQAGGPHGSIH*LKEGAVRANPDLRS Trigger: GCTCCTTAAGTCTGGGTTTGCTCTCACTGCCCCTTCCTTGAGGCAGTGGATACTGCCATGGGGCCCTCCAGCCTGGAGTGGACACATACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR TCA 90 bp | ACTGAAGGGGACCTGATAGGGCGTCAGGCTGTGCAAAGGACTAAGTaGCTCTGGCACGGGAAGCATCAGCTGGCTAAGGTAGCCCAACAC | + |
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Preference number: 1 (lower is better) Translates to: TEGDLIGRQAVQRTK*LWHGKHQLAKVAQH Trigger: GTGTTGGGCTACCTTAGCCAGCTGATGCTTCCCGTGCCAGAGTCACTTAGTCCTTTGCACAGCCTGACGCCCTATCAGGTCCCCTTCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
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| 3UTR GCA 90 bp | ACAAAGGTGACAAAGGCTGTCTTAGAAGGCTGTCTTCAAACTCTCTaGGAGGCAGGAGAGCCAACGGTGCCCAGAGACCTGCCTGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: TKVTKAVLEGCLQTL*EAGEPTVPRDLPGQ Trigger: CTGCCCAGGCAGGTCTCTGGGCACCGTTGGCTCTCCTGCCTCGCAGAGAGTTTGAAGACAGCCTTCTAAGACAGCCTTTGTCACCTTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR GCA 90 bp | GCAGGATGGGGCCCCGAGTGTAGCCTTTCATATCATCCACGATCCTaGAAAGGCCGACCCAGCTGGCATTCACAGCATACAGTATGTGGG | + |
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Preference number: 1 (lower is better) Translates to: AGWGPECSLSYHPRS*KGRPSWHSQHTVCG Trigger: CCCACATACTGTATGCTGTGAATGCCAGCTGGGTCGGCCTTTGCAGGATCGTGGATGATATGAAAGGCTACACTCGGGGCCCCATCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
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| 3UTR TCA 90 bp | CATCATGCCTGCCTGAGAAGCTCCTCAGCTCTGCAACCACAGAAATaGCCTGACACAGTCACTCCTGGTCACAACATCCACCTGCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: HHACLRSSSALQPQK*PDTVTPGHNIHLQW Trigger: CCACTGCAGGTGGATGTTGTGACCAGGAGTGACTGTGTCAGGTCATTTCTGTGGTTGCAGAGCTGAGGAGCTTCTCAGGCAGGCATGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR GCA 90 bp | CCGGCAGTCTGTGCGCTGTACATGAGAACCTGCGGGTCAGCCTGCTaGCCAGTTTCTAGCCATACTTTCATGGTCCCGATTTTCTTGGAA | + |
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Preference number: 1 (lower is better) Translates to: PAVCALYMRTCGSAC*PVSSHTFMVPIFLE Trigger: TTCCAAGAAAATCGGGACCATGAAAGTATGGCTAGAAACTGGGCAGCAGGCTGACCCGCAGGTTCTCATGTACAGCGCACAGACTGCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR TCA 90 bp | AGACAGCACCCGGATCAGGTCCACAAGCAGCCGCAGCCCATTATCTaGCACCCAGCCCATCGTGTTGATGATAAGTGGAAACTCTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: RQHPDQVHKQPQPII*HPAHRVDDKWKLSL Trigger: AAGAGAGAGTTTCCACTTATCATCAACACGATGGGCTGGGTGTCAGATAATGGGCTGCGGCTGCTTGTGGACCTGATCCGGGTGCTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
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| 3UTR GCA 90 bp | GGACCAGTTAGTGAGTGCTCTACAGGGAAGGGGAAGCAGCAGCTCTaGCTAATGGGATTTTCAGATGCTGAGGCTGCCACAAAGATGGCA | + |
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Preference number: 1 (lower is better) Translates to: GPVSECSTGKGKQQL*LMGFSDAEAATKMA Trigger: TGCCATCTTTGTGGCAGCCTCAGCATCTGAAAATCCCATTAGGCAGAGCTGCTGCTTCCCCTTCCCTGTAGAGCACTCACTAACTGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR CCA 90 bp | TACCAAAGCCCAAACAGTCACATATGGGGTTCTGGGCAAGCAGGATaGGGCCCCGAGTGTAGCCTTTCATATCATCCACGATCCTGCAAA | + |
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Preference number: 1 (lower is better) Translates to: YQSPNSHIWGSGQAG*GPECSLSYHPRSCK Trigger: TTTGCAGGATCGTGGATGATATGAAAGGCTACACTCGGGGCCCCATCCTGCTTGCCCAGAACCCCATATGTGACTGTTTGGGCTTTGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
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| 3UTR TCA 90 bp | CGATTTTCTTGGAAAACTGCAAGGCTGTCCTTCCTCTGCCTGTTCTaGGGACACCACGGCTTTCTTCACTGCTTCACAGCTCTCAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: RFSWKTARLSFLCLF*GHHGFLHCFTALRK Trigger: CTTCCTGAGAGCTGTGAAGCAGTGAAGAAAGCCGTGGTGTCCTCAGAACAGGCAGAGGAAGGACAGCCTTGCAGTTTTCCAAGAAAATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR CCA 90 bp | CTGACCCTTCGGGCCCAGGCTGGTTCTGAAAAATACAATGTGGGATaGAAATGGAACCAACCAGCAGACAGTTCACAGTTTTTAACTCTT | + |
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Preference number: 1 (lower is better) Translates to: LTLRAQAGSEKYNVG*KWNQPADSSQFLTL Trigger: AAGAGTTAAAAACTGTGAACTGTCTGCTGGTTGGTTCCATTTCCATCCCACATTGTATTTTTCAGAACCAGCCTGGGCCCGAAGGGTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
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| 3UTR GCA 90 bp | ATCCCGGGAGCAAAGTCTCTCCATTCCCAGGCTTATTTTCTTCTTTaGCGTAATTTGTGTCTAGGGAATGCTTTTCCATACTCTCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: IPGAKSLHSQAYFLL*RNLCLGNAFPYSLS Trigger: AGAGAGAGAGTATGGAAAAGCATTCCCTAGACACAAATTACGGCAAAGAAGAAAATAAGCCTGGGAATGGAGAGACTTTGCTCCCGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
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| 3UTR CCA 90 bp | AAATTAACAGATGAAATACAATCTTCTAAGACTTGCTTACAGCACTaGAAGATCCGATGGCACCCAAGGATCAGACCAAGGAGTTGGCAC | + |
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Preference number: 1 (lower is better) Translates to: KLTDEIQSSKTCLQH*KIRWHPRIRPRSWH Trigger: GTGCCAACTCCTTGGTCTGATCCTTGGGTGCCATCGGATCTTCCAGTGCTGTAAGCAAGTCTTAGAAGATTGTATTTCATCTGTTAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR GCA 90 bp | CAAAAGACCCTGAAATTAACAGATGAAATACAATCTTCTAAGACTTaGTTACAGCACTGGAAGATCCGATGGCACCCAAGGATCAGACCA | + |
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Preference number: 1 (lower is better) Translates to: QKTLKLTDEIQSSKT*LQHWKIRWHPRIRP Trigger: TGGTCTGATCCTTGGGTGCCATCGGATCTTCCAGTGCTGTAAGCAAGTCTTAGAAGATTGTATTTCATCTGTTAATTTCAGGGTCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR-3UTR GCA 90 bp | CAGTCACTCCTGGTCACAACATCCACCTGCAGTGGCCTCTGGGTCTGTCGGAGACAGGAGAGCCAACGGTaGCCAGAGACCTGCCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: QSLLVTTSTCSGLWVCRRQESQR*PETCLG Trigger: GCCCAGGCAGGTCTCTGGGCACCGTTGGCTCTCCTG...TCTCCGACAGACCCAGAGGCCACTGCAGGTGGATGTTGTGACCAGGAGTGACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR-3UTR TCA 90 bp | GCTGTCCTTCCTCTGCCTGTTCTGAGGACACCACGGCTTTCTTCACTGCTTCACCAACACGCCTCTCACTaGGCCTGCTCAGGCCCCCGG | + |
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Preference number: 2 (lower is better) Translates to: AVLPLPVLRTPRLSSLLHQHASH*ACSGPR Trigger: CCGGGGGCCTGAGCAGGCTCAGTGAGAGGCGTGTTG...GTGAAGCAGTGAAGAAAGCCGTGGTGTCCTCAGAACAGGCAGAGGAAGGACAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR-3UTR GCA 90 bp | CCACGGCTTTCTTCACTGCTTCACAGCTCTCAGGAAGCACGCCACAGCCGGGACGCCCCCGGCAGTCTGTaGGCTGTACATGAGAACCTG | + |
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Preference number: 2 (lower is better) Translates to: PRLSSLLHSSQEARHSRDAPGSL*AVHENL Trigger: CAGGTTCTCATGTACAGCGCACAGACTGCCGGGGGC...GTCCCGGCTGTGGCGTGCTTCCTGAGAGCTGTGAAGCAGTGAAGAAAGCCGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR-3UTR CCA 90 bp | GTGTCCACTCCAGGCTGGAGGGCCCCATGGCAGTATCCACTGCCTCAAGGAAGGTCACATATGGGGTTCTaGGCAAGCAGGATGGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: VSTPGWRAPWQYPLPQGRSHMGF*ASRMGP Trigger: GGGCCCCATCCTGCTTGCCCAGAACCCCATATGTGA...CCTTCCTTGAGGCAGTGGATACTGCCATGGGGCCCTCCAGCCTGGAGTGGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
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| 3UTR CAA 90 bp | GCAGTGGCCTCTGGGTCTGTCGGAGAAATCCTCGATAGCCAAGATTaGCCGACACCAGGCATGTATGTGTCCACTCCAGGCTGGAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: AVASGSVGEILDSQD*PTPGMYVSTPGWRA Trigger: GGCCCTCCAGCCTGGAGTGGACACATACATGCCTGGTGTCGGCAAATCTTGGCTATCGAGGATTTCTCCGACAGACCCAGAGGCCACTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR-3UTR CCA 90 bp | TCAGGACCTCTGGGAGAGCAGTCAGTGCTCTTAACTGCTGAGCCACCTCTCCAGAACATCCACCTGCAGTaGCCTCTGGGTCTGTCGGAG | + |
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Preference number: 2 (lower is better) Translates to: SGPLGEQSVLLTAEPPLQNIHLQ*PLGLSE Trigger: CTCCGACAGACCCAGAGGCCACTGCAGGTGGATGTT...CTGGAGAGGTGGCTCAGCAGTTAAGAGCACTGACTGCTCTCCCAGAGGTCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR-3UTR CCA 90 bp | GCAGGAGCTCGGCAGCCACACAGCCCCACTCACCACAGCCCACGCAGTCTGCTGATGTCCAGTGAAGACTaGAAGTGGACTAGACTCTTT | + |
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Preference number: 2 (lower is better) Translates to: AGARQPHSPTHHSPRSLLMSSED*KWTRLF Trigger: AAAGAGTCTAGTCCACTTCCAGTCTTCACTGGACAT...CAGCAGACTGCGTGGGCTGTGGTGAGTGGGGCTGTGTGGCTGCCGAGCTCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
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| 3UTR-3UTR CCA 90 bp | AGCCCCACTCACCACAGCCCACGCAGTCTGCTGACTCGGCCTGGGACGAGGCATAATGTGGGATGGAAATaGAACCAACCAGCAGACAGT | + |
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Preference number: 2 (lower is better) Translates to: SPTHHSPRSLLTRPGTRHNVGWK*NQPADS Trigger: ACTGTCTGCTGGTTGGTTCCATTTCCATCCCACATT...ATGCCTCGTCCCAGGCCGAGTCAGCAGACTGCGTGGGCTGTGGTGAGTGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
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| 3UTR-3UTR TCA 90 bp | GCTGTCCTTCCTCTGCCTGTTCTGAGGACACCACGGCTTTCTTCACTGCTTCACTCCATCATGCCTGCCTaGGAAGCTCCTCAGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: AVLPLPVLRTPRLSSLLHSIMPA*EAPQLC Trigger: GCAGAGCTGAGGAGCTTCTCAGGCAGGCATGATGGA...GTGAAGCAGTGAAGAAAGCCGTGGTGTCCTCAGAACAGGCAGAGGAAGGACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR-3UTR GCA 90 bp | TTTGCCGACACCAGGCATGTATGTGTCCACTCCAGGCTGGAGGGCCCCATGGCACACGGCTTTCTTCACTaGTTCACAGCTCTCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: FADTRHVCVHSRLEGPMAHGFLH*FTALRK Trigger: CTTCCTGAGAGCTGTGAAGCAGTGAAGAAAGCCGTG...TGCCATGGGGCCCTCCAGCCTGGAGTGGACACATACATGCCTGGTGTCGGCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR-3UTR GCA 90 bp | CAAGGATCAGACCAAGGAGTTGGCACCTGGTTGCTAATGTCCACATGGCTCAACCGGTGCCCAGAGACCTaGCTGGGCAGCAGGCTAAGA | + |
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Preference number: 2 (lower is better) Translates to: QGSDQGVGTWLLMSTWLNRCPET*LGSRLR Trigger: TCTTAGCCTGCTGCCCAGGCAGGTCTCTGGGCACCG...GTTGAGCCATGTGGACATTAGCAACCAGGTGCCAACTCCTTGGTCTGATCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR-3UTR GCA 90 bp | ACGCCTCTCACTGAGCCTGCTCAGGCCCCCGGCAGTCTGTGCGCTGTACATGAGATTTTCTTGGAAAACTaGAAGGCTGTCCTTCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: TPLTEPAQAPGSLCAVHEIFLEN*KAVLPL Trigger: CAGAGGAAGGACAGCCTTGCAGTTTTCCAAGAAAAT...CTCATGTACAGCGCACAGACTGCCGGGGGCCTGAGCAGGCTCAGTGAGAGGCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR-3UTR GCA 90 bp | CACTGGAAGATCCGATGGCACCCAAGGATCAGACCAAGGAGTTGGCACCTGGTTTGCGGGTCAGCCTGCTaGCCAGTTTCTAGCCATACT | + |
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Preference number: 2 (lower is better) Translates to: HWKIRWHPRIRPRSWHLVCGSAC*PVSSHT Trigger: AGTATGGCTAGAAACTGGGCAGCAGGCTGACCCGCA...AACCAGGTGCCAACTCCTTGGTCTGATCCTTGGGTGCCATCGGATCTTCCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR-3UTR CCA 90 bp | AGGGCCCCATGGCAGTATCCACTGCCTCAAGGAAGGGGCAGTGAGAGCAAACCCATCAGACCAAGGAGTTaGCACCTGGTTGCTAATGTC | + |
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Preference number: 2 (lower is better) Translates to: RAPWQYPLPQGRGSESKPIRPRS*HLVANV Trigger: GACATTAGCAACCAGGTGCCAACTCCTTGGTCTGAT...GGGTTTGCTCTCACTGCCCCTTCCTTGAGGCAGTGGATACTGCCATGGGGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR-3UTR CCA 90 bp | AAGCCTTCCACAGCCTTGGTCTTTCATGATCCTGCTGGAAGGTGGAGTCTTGACGTGTCCACTCCAGGCTaGAGGGCCCCATGGCAGTAT | + |
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Preference number: 2 (lower is better) Translates to: KPSTALVFHDPAGRWSLDVSTPG*RAPWQY Trigger: ATACTGCCATGGGGCCCTCCAGCCTGGAGTGGACAC...GTCAAGACTCCACCTTCCAGCAGGATCATGAAAGACCAAGGCTGTGGAAGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR-3UTR TCA 90 bp | CACTGGAAGATCCGATGGCACCCAAGGATCAGACCAAGGAGTTGGCACCTGGTTAGCCTTGGTCTTTCATaGTCCTGCTGGAAGGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: HWKIRWHPRIRPRSWHLVSLGLS*SCWKVE Trigger: CTCCACCTTCCAGCAGGATCATGAAAGACCAAGGCT...AACCAGGTGCCAACTCCTTGGTCTGATCCTTGGGTGCCATCGGATCTTCCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR-3UTR GCA 90 bp | GAGTGCTCTACAGGGAAGGGGAAGCAGCAGCTCTGCCTAATGGGATTTTCAGATCTGTACATGAGAACCTaGGGGTCAGCCTGCTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: ECSTGKGKQQLCLMGFSDLYMRT*GSACCP Trigger: TGGGCAGCAGGCTGACCCGCAGGTTCTCATGTACAG...ATCTGAAAATCCCATTAGGCAGAGCTGCTGCTTCCCCTTCCCTGTAGAGCACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR-3UTR GCA 90 bp | ACAAAGGTGACAAAGGCTGTCTTAGAAGGCTGTCTTCAAACTCTCTGCGAGGCACGGTGCCCAGAGACCTaGCTGGGCAGCAGGCTAAGA | + |
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Preference number: 2 (lower is better) Translates to: TKVTKAVLEGCLQTLCEARCPET*LGSRLR Trigger: TCTTAGCCTGCTGCCCAGGCAGGTCTCTGGGCACCG...TGCCTCGCAGAGAGTTTGAAGACAGCCTTCTAAGACAGCCTTTGTCACCTTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR-3UTR CCA 90 bp | AAACTCTCTGCGAGGCAGGAGAGCCAACGGTGCCCAGAGACCTGCCTGGGCAGCCTAGCCATACTTTCATaGTCCCGATTTTCTTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: KLSARQESQRCPETCLGSLAILS*SRFSWK Trigger: TTTCCAAGAAAATCGGGACCATGAAAGTATGGCTAG...GCTGCCCAGGCAGGTCTCTGGGCACCGTTGGCTCTCCTGCCTCGCAGAGAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR-3UTR CCA 90 bp | CCAGTTAGTGAGTGCTCTACAGGGAAGGGGAAGCAGCAGCTCTGCCTAATGGGACCAAGCAAAGGAGACTaGCACACTCCCATGGCTACA | + |
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Preference number: 2 (lower is better) Translates to: PVSECSTGKGKQQLCLMGPSKGD*HTPMAT Trigger: TGTAGCCATGGGAGTGTGCCAGTCTCCTTTGCTTGG...TCCCATTAGGCAGAGCTGCTGCTTCCCCTTCCCTGTAGAGCACTCACTAACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGTCAGTGCTCTTAACTGCTGAGCCACCTCTCCAGCCCCACTCGATCTTTCCAAGCAAAGGAGACTaGCACACTCCCATGGCTACA | + |
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Preference number: 2 (lower is better) Translates to: EQSVLLTAEPPLQPHSIFPSKGD*HTPMAT Trigger: TGTAGCCATGGGAGTGTGCCAGTCTCCTTTGCTTGG...AAAGATCGAGTGGGGCTGGAGAGGTGGCTCAGCAGTTAAGAGCACTGACTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR-3UTR TCA 90 bp | CACTGGAAGATCCGATGGCACCCAAGGATCAGACCAAGGAGTTGGCACCTGGTTGTCCTAACACAGGCCTaGAATACCCAGAGTTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: HWKIRWHPRIRPRSWHLVVLTQA*NTQSLR Trigger: CCTCAAACTCTGGGTATTTCAGGCCTGTGTTAGGAC...AACCAGGTGCCAACTCCTTGGTCTGATCCTTGGGTGCCATCGGATCTTCCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR-3UTR TCA 90 bp | ACCAGAAGATCTGGGGAACTGGACAAAGGTGACAAAGGCTGTCTTAGAAGGCTGTCCATCATGCCTGCCTaGGAAGCTCCTCAGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: TRRSGELDKGDKGCLRRLSIMPA*EAPQLC Trigger: GCAGAGCTGAGGAGCTTCTCAGGCAGGCATGATGGA...CAGCCTTCTAAGACAGCCTTTGTCACCTTTGTCCAGTTCCCCAGATCTTCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| 3UTR-3UTR TCA 90 bp | TGGCAGTATCCACTGCCTCAAGGAAGGGGCAGTGAGAGCAAACCCAGACTTAAGTGGAAGGTGGAGTCTTaGCAGATCCATCATGCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: WQYPLPQGRGSESKPRLKWKVES*QIHHAC Trigger: GCAGGCATGATGGATCTGTCAAGACTCCACCTTCCA...CTTAAGTCTGGGTTTGCTCTCACTGCCCCTTCCTTGAGGCAGTGGATACTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR-3UTR TCA 90 bp | CACCCAAGGATCAGACCAAGGAGTTGGCACCTGGTTGCTAATGTCCACATGGCTAGCCTTGGTCTTTCATaGTCCTGCTGGAAGGTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: HPRIRPRSWHLVANVHMASLGLS*SCWKVE Trigger: CTCCACCTTCCAGCAGGATCATGAAAGACCAAGGCT...AGCCATGTGGACATTAGCAACCAGGTGCCAACTCCTTGGTCTGATCCTTGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR-3UTR GCA 90 bp | GACAAAGGCTGTCTTAGAAGGCTGTCTTCAAACTCTCTGCGAGGCAGGAGAGCCCAGATCCATCATGCCTaGCTGAGAAGCTCCTCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: DKGCLRRLSSNSLRGRRAQIHHA*LRSSSA Trigger: AGCTGAGGAGCTTCTCAGGCAGGCATGATGGATCTG...GGCTCTCCTGCCTCGCAGAGAGTTTGAAGACAGCCTTCTAAGACAGCCTTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR-3UTR GCA 90 bp | GCTGTCCTTCCTCTGCCTGTTCTGAGGACACCACGGCTTTCTTCACTGCTTCACTTGACAGATCCATCATaGCTGCCTGAGAAGCTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: AVLPLPVLRTPRLSSLLHLTDPS*LPEKLL Trigger: GAGGAGCTTCTCAGGCAGGCATGATGGATCTGTCAA...GTGAAGCAGTGAAGAAAGCCGTGGTGTCCTCAGAACAGGCAGAGGAAGGACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR-3UTR CCA 90 bp | GACAAAGGCTGTCTTAGAAGGCTGTCTTCAAACTCTCTGCGAGGCAGGAGAGCCACTGGCACACTCCCATaGCTACAGACAAGATGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: DKGCLRRLSSNSLRGRRATGTLP*LQTRWR Trigger: CCTCCATCTTGTCTGTAGCCATGGGAGTGTGCCAGT...GGCTCTCCTGCCTCGCAGAGAGTTTGAAGACAGCCTTCTAAGACAGCCTTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR-3UTR CCA 90 bp | AAACTCTCTGCGAGGCAGGAGAGCCAACGGTGCCCAGAGACCTGCCTGGGCAGCCGTGTTGATGATAAGTaGAAACTCTCTCTTGTAATC | + |
|
Preference number: 2 (lower is better) Translates to: KLSARQESQRCPETCLGSRVDDK*KLSLVI Trigger: GATTACAAGAGAGAGTTTCCACTTATCATCAACACG...GCTGCCCAGGCAGGTCTCTGGGCACCGTTGGCTCTCCTGCCTCGCAGAGAGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| 3UTR-3UTR TCA 90 bp | AAGCCTTCCACAGCCTTGGTCTTTCATGATCCTGCTGGAAGGTGGAGTCTTGACGGCTGGGGCCAAGTTTaGGACCAAAGAGCTGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: KPSTALVFHDPAGRWSLDGWGQV*DQRAEK Trigger: CTTTTCAGCTCTTTGGTCTCAAACTTGGCCCCAGCC...GTCAAGACTCCACCTTCCAGCAGGATCATGAAAGACCAAGGCTGTGGAAGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR-3UTR TCA 90 bp | CAAGGATCAGACCAAGGAGTTGGCACCTGGTTGCTAATGTCCACATGGCTCAACGTGGTTGTTGGGAATTaGACTCAGGACCTCTGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: QGSDQGVGTWLLMSTWLNVVVGN*TQDLWE Trigger: CTCCCAGAGGTCCTGAGTTCAATTCCCAACAACCAC...GTTGAGCCATGTGGACATTAGCAACCAGGTGCCAACTCCTTGGTCTGATCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR-3UTR GCA 90 bp | CTGGGACGAGGCATCCCGGGAGCAAAGTCTCTCCATTCCCAGGCTTATTTTCTTGAAGCTCCTCAGCTCTaGAACCACAGAAATGACCTG | + |
|
Preference number: 2 (lower is better) Translates to: LGRGIPGAKSLHSQAYFLEAPQL*NHRNDL Trigger: CAGGTCATTTCTGTGGTTGCAGAGCTGAGGAGCTTC...AAGAAAATAAGCCTGGGAATGGAGAGACTTTGCTCCCGGGATGCCTCGTCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| 3UTR CAA 90 bp | GCCTGCTGCCCAGTTTCTAGCCATACTTTCATGGTCCCGATTTTCTaGGAAAACTGCAAGGCTGTCCTTCCTCTGCCTGTTCTGAGGACA | + |
|
Preference number: 2 (lower is better) Translates to: ACCPVSSHTFMVPIF*ENCKAVLPLPVLRT Trigger: TGTCCTCAGAACAGGCAGAGGAAGGACAGCCTTGCAGTTTTCCAAGAAAATCGGGACCATGAAAGTATGGCTAGAAACTGGGCAGCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR-3UTR TCA 90 bp | GAGTGCTCTACAGGGAAGGGGAAGCAGCAGCTCTGCCTAATGGGATTTTCAGATGTCCTAACACAGGCCTaGAATACCCAGAGTTTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: ECSTGKGKQQLCLMGFSDVLTQA*NTQSLR Trigger: CCTCAAACTCTGGGTATTTCAGGCCTGTGTTAGGAC...ATCTGAAAATCCCATTAGGCAGAGCTGCTGCTTCCCCTTCCCTGTAGAGCACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR-3UTR TCA 90 bp | CACCCAAGGATCAGACCAAGGAGTTGGCACCTGGTTGCTAATGTCCACATGGCTCATTGCAGATGGTTGTaGGTCACCATGTGGTTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: HPRIRPRSWHLVANVHMAHCRWL*VTMWLL Trigger: CAACAACCACATGGTGACTCACAACCATCTGCAATG...AGCCATGTGGACATTAGCAACCAGGTGCCAACTCCTTGGTCTGATCCTTGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR-3UTR GCA 90 bp | GGTGACAAAGGCTGTCTTAGAAGGCTGTCTTCAAACTCTCTGCGAGGCAGGAGACACGGCTTTCTTCACTaGTTCACAGCTCTCAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: GDKGCLRRLSSNSLRGRRHGFLH*FTALRK Trigger: CTTCCTGAGAGCTGTGAAGCAGTGAAGAAAGCCGTG...TCTCCTGCCTCGCAGAGAGTTTGAAGACAGCCTTCTAAGACAGCCTTTGTCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR CAA 90 bp | GATCCCATTGCAGATGGTTGTGAGTCACCATGTGGTTGTTGGGAATaGAACTCAGGACCTCTGGGAGAGCAGTCAGTGCTCTTAACTGCT | + |
|
Preference number: 2 (lower is better) Translates to: DPIADGCESPCGCWE*NSGPLGEQSVLLTA Trigger: AGCAGTTAAGAGCACTGACTGCTCTCCCAGAGGTCCTGAGTTCAATTCCCAACAACCACATGGTGACTCACAACCATCTGCAATGGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR-3UTR TCA 90 bp | ACAAAGGTGACAAAGGCTGTCTTAGAAGGCTGTCTTCAAACTCTCTGCGAGGCAGGCTGGGGCCAAGTTTaGGACCAAAGAGCTGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: TKVTKAVLEGCLQTLCEAGWGQV*DQRAEK Trigger: CTTTTCAGCTCTTTGGTCTCAAACTTGGCCCCAGCC...TGCCTCGCAGAGAGTTTGAAGACAGCCTTCTAAGACAGCCTTTGTCACCTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR-3UTR GCA 90 bp | TGCCTAATGGGATTTTCAGATGCTGAGGCTGCCACAAAGATGGCACCAAGCAAACAGATCCATCATGCCTaGCTGAGAAGCTCCTCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: CLMGFSDAEAATKMAPSKQIHHA*LRSSSA Trigger: AGCTGAGGAGCTTCTCAGGCAGGCATGATGGATCTG...TTTGCTTGGTGCCATCTTTGTGGCAGCCTCAGCATCTGAAAATCCCATTAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR-3UTR CCA 90 bp | AGTCACTCCTGGTCACAACATCCACCTGCAGTGGCCTCTGGGTCTGTCGGAGAACTAGCCATACTTTCATaGTCCCGATTTTCTTGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: SHSWSQHPPAVASGSVGELAILS*SRFSWK Trigger: TTTCCAAGAAAATCGGGACCATGAAAGTATGGCTAG...TTCTCCGACAGACCCAGAGGCCACTGCAGGTGGATGTTGTGACCAGGAGTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR-3UTR CCA 90 bp | AGTCACTCCTGGTCACAACATCCACCTGCAGTGGCCTCTGGGTCTGTCGGAGAAAAATACAATGTGGGATaGAAATGGAACCAACCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: SHSWSQHPPAVASGSVGEKYNVG*KWNQPA Trigger: TGCTGGTTGGTTCCATTTCCATCCCACATTGTATTT...TTCTCCGACAGACCCAGAGGCCACTGCAGGTGGATGTTGTGACCAGGAGTGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| 3UTR-3UTR GCA 90 bp | AGGCTGGTTCTGAAAAATACAATGTGGGATGGAAATGGAACCAACCAGCAGACATGCGGGTCAGCCTGCTaGCCAGTTTCTAGCCATACT | + |
|
Preference number: 2 (lower is better) Translates to: RLVLKNTMWDGNGTNQQTCGSAC*PVSSHT Trigger: AGTATGGCTAGAAACTGGGCAGCAGGCTGACCCGCA...TGTCTGCTGGTTGGTTCCATTTCCATCCCACATTGTATTTTTCAGAACCAGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| 3UTR-3UTR GCA 90 bp | ACCAGAAGATCTGGGGAACTGGACAAAGGTGACAAAGGCTGTCTTAGAAGGCTGCCATGTCAATGCCTCTaGAGATACCAAAGCCCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: TRRSGELDKGDKGCLRRLPCQCL*RYQSPN Trigger: GTTTGGGCTTTGGTATCTGCAGAGGCATTGACATGG...CAGCCTTCTAAGACAGCCTTTGTCACCTTTGTCCAGTTCCCCAGATCTTCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| 3UTR-3UTR CCA 90 bp | GGTGACAAAGGCTGTCTTAGAAGGCTGTCTTCAAACTCTCTGCGAGGCAGGAGATCACCATGTGGTTGTTaGGAATTGAACTCAGGACCT | + |
|
Preference number: 2 (lower is better) Translates to: GDKGCLRRLSSNSLRGRRSPCGC*ELNSGP Trigger: AGGTCCTGAGTTCAATTCCCAACAACCACATGGTGA...TCTCCTGCCTCGCAGAGAGTTTGAAGACAGCCTTCTAAGACAGCCTTTGTCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR-3UTR CCA 90 bp | ACAAAGGTGACAAAGGCTGTCTTAGAAGGCTGTCTTCAAACTCTCTGCGAGGCACCAAACAGTCACATATaGGGTTCTGGGCAAGCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: TKVTKAVLEGCLQTLCEAPNSHI*GSGQAG Trigger: TCCTGCTTGCCCAGAACCCCATATGTGACTGTTTGG...TGCCTCGCAGAGAGTTTGAAGACAGCCTTCTAAGACAGCCTTTGTCACCTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| 3UTR-3UTR TCA 90 bp | GCCCAGTTTCTAGCCATACTTTCATGGTCCCGATTTTCTTGGAAAACTGCAAGGTATACAGGCCATCTGTaGGCTCTACGTATTCGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: AQFLAILSWSRFSWKTARYTGHL*ALRIRR Trigger: CCTCCGAATACGTAGAGCTCACAGATGGCCTGTATA...CCTTGCAGTTTTCCAAGAAAATCGGGACCATGAAAGTATGGCTAGAAACTGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| 3UTR-3UTR CCA 90 bp | CTGTCTCAGAGGGAAGACACTGGAGGGGCACAGCACACTTTCCAGTTCCGTGAACTGAAAAATACAATGTaGGATGGAAATGGAACCAAC | + |
|
Preference number: 2 (lower is better) Translates to: LSQREDTGGAQHTFQFRELKNTM*DGNGTN Trigger: GTTGGTTCCATTTCCATCCCACATTGTATTTTTCAG...TTCACGGAACTGGAAAGTGTGCTGTGCCCCTCCAGTGTCTTCCCTCTGAGACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| 3UTR-3UTR TCA 90 bp | AAGCCTTCCACAGCCTTGGTCTTTCATGATCCTGCTGGAAGGTGGAGTCTTGACAATTATAATCTGTGGTaGCATAAGGAACTGACCCTT | + |
|
Preference number: 2 (lower is better) Translates to: KPSTALVFHDPAGRWSLDNYNLW*HKELTL Trigger: AAGGGTCAGTTCCTTATGTCACCACAGATTATAATT...GTCAAGACTCCACCTTCCAGCAGGATCATGAAAGACCAAGGCTGTGGAAGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| 3UTR-3UTR TCA 90 bp | AGCAAGTTCTTCAACATAAAGCCTCATGATTCAAAAGACCCTGAAATTAACAGACGATCTTTAGTACTGTaGAGACCAGAAGATCTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: SKFFNIKPHDSKDPEINRRSLVL*RPEDLG Trigger: CCCCAGATCTTCTGGTCTTCACAGTACTAAAGATCG...TCTGTTAATTTCAGGGTCTTTTGAATCATGAGGCTTTATGTTGAAGAACTTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR-3UTR CCA 90 bp | AGCAAGTTCTTCAACATAAAGCCTCATGATTCAAAAGACCCTGAAATTAACAGATGGTCCCGATTTTCTTaGAAAACTGCAAGGCTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: SKFFNIKPHDSKDPEINRWSRFS*KTARLS Trigger: GGACAGCCTTGCAGTTTTCCAAGAAAATCGGGACCA...TCTGTTAATTTCAGGGTCTTTTGAATCATGAGGCTTTATGTTGAAGAACTTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR CAA 90 bp | TCTAAATTGTCTCCAAATTCTGGAATTTCAAAACCTCGATATCTTTaGATCTTGCTTTTTGTATACAGGCCATCTGTGAGCTCTACGTAT | + |
|
Preference number: 2 (lower is better) Translates to: SKLSPNSGISKPRYL*ILLFVYRPSVSSTY Trigger: ATACGTAGAGCTCACAGATGGCCTGTATACAAAAAGCAAGATCAAAAGATATCGAGGTTTTGAAATTCCAGAATTTGGAGACAATTTAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| 3UTR-3UTR GCA 90 bp | AGCAAGTTCTTCAACATAAAGCCTCATGATTCAAAAGACCCTGAAATTAACAGAGCTTATTTTCTTCTTTaGCGTAATTTGTGTCTAGGG | + |
|
Preference number: 2 (lower is better) Translates to: SKFFNIKPHDSKDPEINRAYFLL*RNLCLG Trigger: CCCTAGACACAAATTACGGCAAAGAAGAAAATAAGC...TCTGTTAATTTCAGGGTCTTTTGAATCATGAGGCTTTATGTTGAAGAACTTGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| 3UTR TCA 72 bp | CACACAGCCCCACTCACCACAGCCCACGCAGTCTGCTaGCTCGGCCTGGGACGAGGCATCCCGGGAGCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HTAPLTTAHAVC*LGLGRGIPGAK Trigger: CTTTGCTCCCGGGATGCCTCGTCCCAGGCCGAGTCAGCAGACTGCGTGGGCTGTGGTGAGTGGGGCTGTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR GCA 72 bp | TCTGCGAGGCAGGAGAGCCAACGGTGCCCAGAGACCTaGCTGGGCAGCAGGCTAAGAGCCTCCTCCCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SARQESQRCPET*LGSRLRASSLP Trigger: TGGGAGGGAGGAGGCTCTTAGCCTGCTGCCCAGGCAGGTCTCTGGGCACCGTTGGCTCTCCTGCCTCGCAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR GCA 72 bp | CCTCTCACTGAGCCTGCTCAGGCCCCCGGCAGTCTGTaGGCTGTACATGAGAACCTGCGGGTCAGCCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PLTEPAQAPGSL*AVHENLRVSLL Trigger: CAGCAGGCTGACCCGCAGGTTCTCATGTACAGCGCACAGACTGCCGGGGGCCTGAGCAGGCTCAGTGAGAGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR TCA 72 bp | GCCTGCTCAGGCCCCCGGCAGTCTGTGCGCTGTACATaGGAACCTGCGGGTCAGCCTGCTGCCCAGTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: ACSGPRQSVRCT*EPAGQPAAQFL Trigger: TAGAAACTGGGCAGCAGGCTGACCCGCAGGTTCTCATGTACAGCGCACAGACTGCCGGGGGCCTGAGCAGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR TCA 72 bp | CTCCTCCCTCCCAGAAAGGCTCACCACAAGCTCAAGTaGGACACAGACTGGGCGAGGGGGCGGTGGGGACCA | + |
|
Preference number: 3 (lower is better) Translates to: LLPPRKAHHKLK*DTDWARGRWGP Trigger: TGGTCCCCACCGCCCCCTCGCCCAGTCTGTGTCTCACTTGAGCTTGTGGTGAGCCTTTCTGGGAGGGAGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR TCA 72 bp | AGACACTGGAGGGGCACAGCACACTTTCCAGTTCCGTaGACAGCGGGCAGGAGCAGGAGCTCGGCAGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: RHWRGTAHFPVP*TAGRSRSSAAT Trigger: TGTGGCTGCCGAGCTCCTGCTCCTGCCCGCTGTTCACGGAACTGGAAAGTGTGCTGTGCCCCTCCAGTGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR GCA 72 bp | GTCTTCAAACTCTCTGCGAGGCAGGAGAGCCAACGGTaGCCAGAGACCTGCCTGGGCAGCAGGCTAAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: VFKLSARQESQR*PETCLGSRLRA Trigger: GGCTCTTAGCCTGCTGCCCAGGCAGGTCTCTGGGCACCGTTGGCTCTCCTGCCTCGCAGAGAGTTTGAAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR TCA 72 bp | GTTGCTAATGTCCACATGGCTCAACACGCCTCTCACTaGGCCTGCTCAGGCCCCCGGCAGTCTGTGCGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: VANVHMAQHASH*ACSGPRQSVRC Trigger: ACAGCGCACAGACTGCCGGGGGCCTGAGCAGGCTCAGTGAGAGGCGTGTTGAGCCATGTGGACATTAGCAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR CCA 72 bp | GGCATGTATGTGTCCACTCCAGGCTGGAGGGCCCCATaGCAGTATCCACTGCCTCAAGGAAGGGGCAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GMYVSTPGWRAP*QYPLPQGRGSE Trigger: CTCACTGCCCCTTCCTTGAGGCAGTGGATACTGCCATGGGGCCCTCCAGCCTGGAGTGGACACATACATGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR CCA 72 bp | TTGCCGACACCAGGCATGTATGTGTCCACTCCAGGCTaGAGGGCCCCATGGCAGTATCCACTGCCTCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LPTPGMYVSTPG*RAPWQYPLPQG Trigger: TCCTTGAGGCAGTGGATACTGCCATGGGGCCCTCCAGCCTGGAGTGGACACATACATGCCTGGTGTCGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR CCA 72 bp | AGGCCGACCCAGCTGGCATTCACAGCATACAGTATGTaGGTAGGCGCAACGTCGGCATGCAAGACCCGGATA | + |
|
Preference number: 3 (lower is better) Translates to: RPTQLAFTAYSM*VGATSACKTRI Trigger: TATCCGGGTCTTGCATGCCGACGTTGCGCCTACCCACATACTGTATGCTGTGAATGCCAGCTGGGTCGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| 3UTR CCA 72 bp | GACACAGTCACTCCTGGTCACAACATCCACCTGCAGTaGCCTCTGGGTCTGTCGGAGAAATCCTCGATAGCC | + |
|
Preference number: 3 (lower is better) Translates to: DTVTPGHNIHLQ*PLGLSEKSSIA Trigger: GGCTATCGAGGATTTCTCCGACAGACCCAGAGGCCACTGCAGGTGGATGTTGTGACCAGGAGTGACTGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR TCA 72 bp | GACCTGATAGGGCGTCAGGCTGTGCAAAGGACTAAGTaGCTCTGGCACGGGAAGCATCAGCTGGCTAAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: DLIGRQAVQRTK*LWHGKHQLAKV Trigger: TACCTTAGCCAGCTGATGCTTCCCGTGCCAGAGTCACTTAGTCCTTTGCACAGCCTGACGCCCTATCAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| 3UTR GCA 72 bp | ACAAAGGCTGTCTTAGAAGGCTGTCTTCAAACTCTCTaGGAGGCAGGAGAGCCAACGGTGCCCAGAGACCTG | + |
|
Preference number: 3 (lower is better) Translates to: TKAVLEGCLQTL*EAGEPTVPRDL Trigger: CAGGTCTCTGGGCACCGTTGGCTCTCCTGCCTCGCAGAGAGTTTGAAGACAGCCTTCTAAGACAGCCTTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR CCA 72 bp | GATGGCACCCAAGGATCAGACCAAGGAGTTGGCACCTaGTTGCTAATGTCCACATGGCTCAACACGCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: DGTQGSDQGVGT*LLMSTWLNTPL Trigger: GAGAGGCGTGTTGAGCCATGTGGACATTAGCAACCAGGTGCCAACTCCTTGGTCTGATCCTTGGGTGCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR TCA 72 bp | GGGACAACCAGTCGTCAAGAGGGCTGGGGCCAAGTTTaGGACCAAAGAGCTGAAAAGTCTGAGAGCTGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: GTTSRQEGWGQV*DQRAEKSESWC Trigger: ACACCAGCTCTCAGACTTTTCAGCTCTTTGGTCTCAAACTTGGCCCCAGCCCTCTTGACGACTGGTTGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR GCA 72 bp | TGTGCGCTGTACATGAGAACCTGCGGGTCAGCCTGCTaGCCAGTTTCTAGCCATACTTTCATGGTCCCGATT | + |
|
Preference number: 3 (lower is better) Translates to: CALYMRTCGSAC*PVSSHTFMVPI Trigger: AATCGGGACCATGAAAGTATGGCTAGAAACTGGGCAGCAGGCTGACCCGCAGGTTCTCATGTACAGCGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR GCA 72 bp | CTGGGTCTGTCGGAGAAATCCTCGATAGCCAAGATTTaGCGACACCAGGCATGTATGTGTCCACTCCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LGLSEKSSIAKI*RHQACMCPLQA Trigger: AGCCTGGAGTGGACACATACATGCCTGGTGTCGGCAAATCTTGGCTATCGAGGATTTCTCCGACAGACCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR GCA 72 bp | ATCCTGCTGGAAGGTGGAGTCTTGACAGATCCATCATaGCTGCCTGAGAAGCTCCTCAGCTCTGCAACCACA | + |
|
Preference number: 3 (lower is better) Translates to: ILLEGGVLTDPS*LPEKLLSSATT Trigger: TGTGGTTGCAGAGCTGAGGAGCTTCTCAGGCAGGCATGATGGATCTGTCAAGACTCCACCTTCCAGCAGGAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR CCA 72 bp | GAGGCTGCCACAAAGATGGCACCAAGCAAAGGAGACTaGCACACTCCCATGGCTACAGACAAGATGGAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: EAATKMAPSKGD*HTPMATDKMEV Trigger: TACCTCCATCTTGTCTGTAGCCATGGGAGTGTGCCAGTCTCCTTTGCTTGGTGCCATCTTTGTGGCAGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR CCA 72 bp | CCAAACAGTCACATATGGGGTTCTGGGCAAGCAGGATaGGGCCCCGAGTGTAGCCTTTCATATCATCCACGA | + |
|
Preference number: 3 (lower is better) Translates to: PNSHIWGSGQAG*GPECSLSYHPR Trigger: TCGTGGATGATATGAAAGGCTACACTCGGGGCCCCATCCTGCTTGCCCAGAACCCCATATGTGACTGTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| 3UTR TCA 72 bp | TGGAAAACTGCAAGGCTGTCCTTCCTCTGCCTGTTCTaGGGACACCACGGCTTTCTTCACTGCTTCACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: WKTARLSFLCLF*GHHGFLHCFTA Trigger: AGCTGTGAAGCAGTGAAGAAAGCCGTGGTGTCCTCAGAACAGGCAGAGGAAGGACAGCCTTGCAGTTTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR TCA 72 bp | GAGAAGCTCCTCAGCTCTGCAACCACAGAAATGACCTaGCACAGTCACTCCTGGTCACAACATCCACCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: EKLLSSATTEMT*HSHSWSQHPPA Trigger: TGCAGGTGGATGTTGTGACCAGGAGTGACTGTGTCAGGTCATTTCTGTGGTTGCAGAGCTGAGGAGCTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR TCA 72 bp | AGCCACCTCTCCAGCCCCACTCGATCTTTAGTACTGTaGAGACCAGAAGATCTGGGGAACTGGACAAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SHLSSPTRSLVL*RPEDLGNWTKV Trigger: CACCTTTGTCCAGTTCCCCAGATCTTCTGGTCTTCACAGTACTAAAGATCGAGTGGGGCTGGAGAGGTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR-3UTR CAA 90 bp | CCACGGCTTTCTTCACTGCTTCACAGCTCTCAGGAAGCACGCCACAGCCGGGACTCTCGAAAAATCCTGTaGTATTTGGCCCTGTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: PRLSSLLHSSQEARHSRDSRKIL*YLALFF Trigger: AAAGAACAGGGCCAAATACAACAGGATTTTTCGAGA...GTCCCGGCTGTGGCGTGCTTCCTGAGAGCTGTGAAGCAGTGAAGAAAGCCGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| 3UTR TCA 72 bp | GAAGCAGCAGCTCTGCCTAATGGGATTTTCAGATGCTaGGGCTGCCACAAAGATGGCACCAAGCAAAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: EAAALPNGIFRC*GCHKDGTKQRR Trigger: TCTCCTTTGCTTGGTGCCATCTTTGTGGCAGCCTCAGCATCTGAAAATCCCATTAGGCAGAGCTGCTGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR TCA 72 bp | CAGATGGTTGTGAGTCACCATGTGGTTGTTGGGAATTaGACTCAGGACCTCTGGGAGAGCAGTCAGTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QMVVSHHVVVGN*TQDLWESSQCS Trigger: AGAGCACTGACTGCTCTCCCAGAGGTCCTGAGTTCAATTCCCAACAACCACATGGTGACTCACAACCATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR GCA 72 bp | CACGGGAAGCATCAGCTGGCTAAGGTAGCCCAACACTaGCAGATCTCGAAAAATCCTGTTGTATTTGGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: HGKHQLAKVAQH*QISKNPVVFGP Trigger: AGGGCCAAATACAACAGGATTTTTCGAGATCTGGCAGTGTTGGGCTACCTTAGCCAGCTGATGCTTCCCGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| 3UTR GCA 72 bp | GGATGTGGTAGGTCCGCTTGTCCATGTCAATGCCTCTaGAGATACCAAAGCCCAAACAGTCACATATGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: GCGRSACPCQCL*RYQSPNSHIWG Trigger: ACCCCATATGTGACTGTTTGGGCTTTGGTATCTGCAGAGGCATTGACATGGACAAGCGGACCTACCACATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| 3UTR CCA 72 bp | GGTCAGCCTGCTGCCCAGTTTCTAGCCATACTTTCATaGTCCCGATTTTCTTGGAAAACTGCAAGGCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GQPAAQFLAILS*SRFSWKTARLS Trigger: GGACAGCCTTGCAGTTTTCCAAGAAAATCGGGACCATGAAAGTATGGCTAGAAACTGGGCAGCAGGCTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR CCA 72 bp | TCTTCTAAGACTTGCTTACAGCACTGGAAGATCCGATaGCACCCAAGGATCAGACCAAGGAGTTGGCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: SSKTCLQHWKIR*HPRIRPRSWHL Trigger: CAGGTGCCAACTCCTTGGTCTGATCCTTGGGTGCCATCGGATCTTCCAGTGCTGTAAGCAAGTCTTAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR CCA 72 bp | CCCATTGCAGATGGTTGTGAGTCACCATGTGGTTGTTaGGAATTGAACTCAGGACCTCTGGGAGAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: PIADGCESPCGC*ELNSGPLGEQS Trigger: TGACTGCTCTCCCAGAGGTCCTGAGTTCAATTCCCAACAACCACATGGTGACTCACAACCATCTGCAATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR CCA 72 bp | CCCTTCGGGCCCAGGCTGGTTCTGAAAAATACAATGTaGGATGGAAATGGAACCAACCAGCAGACAGTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: PFGPRLVLKNTM*DGNGTNQQTVH Trigger: GTGAACTGTCTGCTGGTTGGTTCCATTTCCATCCCACATTGTATTTTTCAGAACCAGCCTGGGCCCGAAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| 3UTR CCA 72 bp | ATGGAGGTAAGCAATGGTGTAAGCCTTCCACAGCCTTaGTCTTTCATGATCCTGCTGGAAGGTGGAGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: MEVSNGVSLPQP*SFMILLEGGVL Trigger: CAAGACTCCACCTTCCAGCAGGATCATGAAAGACCAAGGCTGTGGAAGGCTTACACCATTGCTTACCTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR CCA 72 bp | CACTCCCATGGCTACAGACAAGATGGAGGTAAGCAATaGTGTAAGCCTTCCACAGCCTTGGTCTTTCATGAT | + |
|
Preference number: 3 (lower is better) Translates to: HSHGYRQDGGKQ*CKPSTALVFHD Trigger: ATCATGAAAGACCAAGGCTGTGGAAGGCTTACACCATTGCTTACCTCCATCTTGTCTGTAGCCATGGGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR CCA 72 bp | CGGGCCCAGGCTGGTTCTGAAAAATACAATGTGGGATaGAAATGGAACCAACCAGCAGACAGTTCACAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: RAQAGSEKYNVG*KWNQPADSSQF Trigger: AAACTGTGAACTGTCTGCTGGTTGGTTCCATTTCCATCCCACATTGTATTTTTCAGAACCAGCCTGGGCCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| 3UTR TCA 72 bp | CTGTTGCTCCAGGGATATTTAAATTATAATCTGTGGTaGCATAAGGAACTGACCCTTCGGGCCCAGGCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LLLQGYLNYNLW*HKELTLRAQAG Trigger: ACCAGCCTGGGCCCGAAGGGTCAGTTCCTTATGTCACCACAGATTATAATTTAAATATCCCTGGAGCAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| 3UTR CCA 72 bp | CAGTTTCTAGCCATACTTTCATGGTCCCGATTTTCTTaGAAAACTGCAAGGCTGTCCTTCCTCTGCCTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: QFLAILSWSRFS*KTARLSFLCLF Trigger: GAACAGGCAGAGGAAGGACAGCCTTGCAGTTTTCCAAGAAAATCGGGACCATGAAAGTATGGCTAGAAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR CCA 72 bp | ATTTACAGCGATCAGAATATAACTGAACGACATAATTaGGAGACAGCACCCGGATCAGGTCCACAAGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: IYSDQNITERHN*ETAPGSGPQAA Trigger: GGCTGCTTGTGGACCTGATCCGGGTGCTGTCTCCCAATTATGTCGTTCAGTTATATTCTGATCGCTGTAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| 3UTR CCA 72 bp | GATGAAATACAATCTTCTAAGACTTGCTTACAGCACTaGAAGATCCGATGGCACCCAAGGATCAGACCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: DEIQSSKTCLQH*KIRWHPRIRPR Trigger: CCTTGGTCTGATCCTTGGGTGCCATCGGATCTTCCAGTGCTGTAAGCAAGTCTTAGAAGATTGTATTTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGGAGGTAAGCAATGGTGTAAGCCTTCCACAGCCTTGGTCTTTCATGATCCTGCTCCAATTTTCTCTGTaGCTCCAGGGATATTTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: MEVSNGVSLPQPWSFMILLQFSL*LQGYLN Trigger: ATTTAAATATCCCTGGAGCAACAGAGAAAATTGGAG...CAGGATCATGAAAGACCAAGGCTGTGGAAGGCTTACACCATTGCTTACCTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| 3UTR GCA 72 bp | GCAAAGTCTCTCCATTCCCAGGCTTATTTTCTTCTTTaGCGTAATTTGTGTCTAGGGAATGCTTTTCCATAC | + |
|
Preference number: 3 (lower is better) Translates to: AKSLHSQAYFLL*RNLCLGNAFPY Trigger: GTATGGAAAAGCATTCCCTAGACACAAATTACGGCAAAGAAGAAAATAAGCCTGGGAATGGAGAGACTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| 3UTR CCA 72 bp | CAGGCTGGTTCTGAAAAATACAATGTGGGATGGAAATaGAACCAACCAGCAGACAGTTCACAGTTTTTAACT | + |
|
Preference number: 3 (lower is better) Translates to: QAGSEKYNVGWK*NQPADSSQFLT Trigger: AGTTAAAAACTGTGAACTGTCTGCTGGTTGGTTCCATTTCCATCCCACATTGTATTTTTCAGAACCAGCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| 3UTR TCA 72 bp | CTGTTCTTTTCATTTTTACTACTTAAGAATTCGGAGTaGACAGACAGCAGTACATGTCCAGTGAAGACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LFFSFLLLKNSE*TDSSTCPVKTG Trigger: TCCAGTCTTCACTGGACATGTACTGCTGTCTGTTCACTCCGAATTCTTAAGTAGTAAAAATGAAAAGAACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| CDS-3UTR TCA 90 bp | CAGGAGCAGGAGCTCGGCAGCCACACAGCCCCACTCACCACAGCCCACGCAGTCAGTGGTTGCGGGGGTTaGGCAGGCTGCAGGTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QEQELGSHTAPLTTAHAVSGCGG*AGCRSR Trigger: CCGCGACCTGCAGCCTGCTCAACCCCCGCAACCACT...GACTGCGTGGGCTGTGGTGAGTGGGGCTGTGTGGCTGCCGAGCTCCTGCTCCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| CDS-3UTR TCA 90 bp | CACTGGAAGATCCGATGGCACCCAAGGATCAGACCAAGGAGTTGGCACCTGGTTAGTGGTTGCGGGGGTTaGGCAGGCTGCAGGTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HWKIRWHPRIRPRSWHLVSGCGG*AGCRSR Trigger: CCGCGACCTGCAGCCTGCTCAACCCCCGCAACCACT...AACCAGGTGCCAACTCCTTGGTCTGATCCTTGGGTGCCATCGGATCTTCCAGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| CDS-3UTR TCA 90 bp | TTTGCCGACACCAGGCATGTATGTGTCCACTCCAGGCTGGAGGGCCCCATGGCACGCCACACAACAGGATaGCAGGGCAGCCATCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: FADTRHVCVHSRLEGPMARHTTG*QGSHHR Trigger: CCTGTGATGGCTGCCCTGTCATCCTGTTGTGTGGCG...TGCCATGGGGCCCTCCAGCCTGGAGTGGACACATACATGCCTGGTGTCGGCAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084116.13 |
||
| CDS-3UTR GCA 90 bp | CTCACCACAAGCTCAAGTGAGACACAGACTGGGCGAGGGGGCGGTGGGGACCAGACAGGAGCGTTCTCCTaGAGGAGCACGTATGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LTTSSSETQTGRGGGGDQTGAFS*RSTYEE Trigger: CTCCTCATACGTGCTCCTGCAGGAGAACGCTCCTGT...CTGGTCCCCACCGCCCCCTCGCCCAGTCTGTGTCTCACTTGAGCTTGTGGTGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| CDS-3UTR CCA 90 bp | CAGCACACTTTCCAGTTCCGTGAACAGCGGGCAGGAGCAGGAGCTCGGCAGCCATCACATATGGGGTTCTaGGCAAGCAGGATGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QHTFQFREQRAGAGARQPSHMGF*ASRMGP Trigger: GGGCCCCATCCTGCTTGCCCAGAACCCCATATGTGA...TGGCTGCCGAGCTCCTGCTCCTGCCCGCTGTTCACGGAACTGGAAAGTGTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084116.13 |
||
| CDS-3UTR GCA 90 bp | TGCGGGTCAGCCTGCTGCCCAGTTTCTAGCCATACTTTCATGGTCCCGATTTTCGGTGGGGCCGGGCTTTaGGTACCCGCAGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CGSACCPVSSHTFMVPIFGGAGL*VPAARK Trigger: CTTCCTGGCTGCGGGTACGCAAAGCCCGGCCCCACC...GAAAATCGGGACCATGAAAGTATGGCTAGAAACTGGGCAGCAGGCTGACCCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| CDS-3UTR GCA 90 bp | CAGCACACTTTCCAGTTCCGTGAACAGCGGGCAGGAGCAGGAGCTCGGCAGCCAACAGGAGCGTTCTCCTaGAGGAGCACGTATGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QHTFQFREQRAGAGARQPTGAFS*RSTYEE Trigger: CTCCTCATACGTGCTCCTGCAGGAGAACGCTCCTGT...TGGCTGCCGAGCTCCTGCTCCTGCCCGCTGTTCACGGAACTGGAAAGTGTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| CDS-3UTR GCA 90 bp | AAACTCTCTGCGAGGCAGGAGAGCCAACGGTGCCCAGAGACCTGCCTGGGCAGCGGAGTGAACTCCGTCTaGCCCAGATCACATTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KLSARQESQRCPETCLGSGVNSV*PRSHSR Trigger: TCTGGAATGTGATCTGGGGCAGACGGAGTTCACTCC...GCTGCCCAGGCAGGTCTCTGGGCACCGTTGGCTCTCCTGCCTCGCAGAGAGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| CDS-3UTR CCA 90 bp | TGGCAGTATCCACTGCCTCAAGGAAGGGGCAGTGAGAGCAAACCCAGACTTAAGCGGCTGAGGAGGAGGTaGGGCCGGGCTTTGCGTACC | + |
|
Preference number: 4 (lower is better) Translates to: WQYPLPQGRGSESKPRLKRLRRR*GRALRT Trigger: GGTACGCAAAGCCCGGCCCCACCTCCTCCTCAGCCG...CTTAAGTCTGGGTTTGCTCTCACTGCCCCTTCCTTGAGGCAGTGGATACTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| CDS-3UTR TCA 90 bp | AGTCACTCCTGGTCACAACATCCACCTGCAGTGGCCTCTGGGTCTGTCGGAGAAGGTGACATAAGGAACTaGCCCTTCGGGCCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHSWSQHPPAVASGSVGEGDIRN*PFGPRL Trigger: CAGCCTGGGCCCGAAGGGTCAGTTCCTTATGTCACC...TTCTCCGACAGACCCAGAGGCCACTGCAGGTGGATGTTGTGACCAGGAGTGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084116.13 |
||
| CDS-3UTR GCA 90 bp | CACTTTGGAACACGGAGAAGGGAACAGACACCGGGTAGATTCTTCCTCAGTGGTGGTGGGGCCGGGCTTTaGGTACCCGCAGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HFGTRRREQTPGRFFLSGGGAGL*VPAARK Trigger: CTTCCTGGCTGCGGGTACGCAAAGCCCGGCCCCACC...ACCACTGAGGAAGAATCTACCCGGTGTCTGTTCCCTTCTCCGTGTTCCAAAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
||
| CDS-3UTR GCA 90 bp | GAGTGCTCTACAGGGAAGGGGAAGCAGCAGCTCTGCCTAATGGGATTTTCAGATGGTGGGGCCGGGCTTTaGGTACCCGCAGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ECSTGKGKQQLCLMGFSDGGAGL*VPAARK Trigger: CTTCCTGGCTGCGGGTACGCAAAGCCCGGCCCCACC...ATCTGAAAATCCCATTAGGCAGAGCTGCTGCTTCCCCTTCCCTGTAGAGCACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| CDS-3UTR TCA 90 bp | CACTGGAAGATCCGATGGCACCCAAGGATCAGACCAAGGAGTTGGCACCTGGTTCACAGCCAGGAGGAGTaGACTCCGTCTGCCCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HWKIRWHPRIRPRSWHLVHSQEE*TPSAPD Trigger: ATCTGGGGCAGACGGAGTTCACTCCTCCTGGCTGTG...AACCAGGTGCCAACTCCTTGGTCTGATCCTTGGGTGCCATCGGATCTTCCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| CDS-3UTR TCA 90 bp | GACAAAGGCTGTCTTAGAAGGCTGTCTTCAAACTCTCTGCGAGGCAGGAGAGCCCTGGGGGTAGAGGGGTaGGGATGTGGTAGGTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: DKGCLRRLSSNSLRGRRALGVEG*GCGRSA Trigger: AGCGGACCTACCACATCCTCACCCCTCTACCCCCAG...GGCTCTCCTGCCTCGCAGAGAGTTTGAAGACAGCCTTCTAAGACAGCCTTTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084116.13 |
||
| CDS-3UTR TCA 90 bp | AGATTCTTCCTCAGTGGTAAAATACGGCTCTCAGCTCCGACAGCACGGCACCACCGCCACACAACAGGATaGCAGGGCAGCCATCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RFFLSGKIRLSAPTARHHRHTTG*QGSHHR Trigger: CCTGTGATGGCTGCCCTGTCATCCTGTTGTGTGGCG...GTGGTGCCGTGCTGTCGGAGCTGAGAGCCGTATTTTACCACTGAGGAAGAATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
||
| CDS-3UTR TCA 90 bp | TGGCAGTATCCACTGCCTCAAGGAAGGGGCAGTGAGAGCAAACCCAGACTTAAGCACAGCCAGGAGGAGTaGACTCCGTCTGCCCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: WQYPLPQGRGSESKPRLKHSQEE*TPSAPD Trigger: ATCTGGGGCAGACGGAGTTCACTCCTCCTGGCTGTG...CTTAAGTCTGGGTTTGCTCTCACTGCCCCTTCCTTGAGGCAGTGGATACTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| CDS-3UTR TCA 90 bp | GATTCTTCCTCAGTGGTAAAATACGGCTCTCAGCTCCGACAGCACGGCACCACGTGTGGTTTCCTCTGGTaGGTGTACGGCGGTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DSSSVVKYGSQLRQHGTTCGFLW*VYGGPR Trigger: TCTGGGACCGCCGTACACTCACCAGAGGAAACCACA...CGTGGTGCCGTGCTGTCGGAGCTGAGAGCCGTATTTTACCACTGAGGAAGAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
||
| CDS-3UTR TCA 90 bp | AGGGCCCCATGGCAGTATCCACTGCCTCAAGGAAGGGGCAGTGAGAGCAAACCCTATACAGGCCATCTGTaGGCTCTACGTATTCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RAPWQYPLPQGRGSESKPYTGHL*ALRIRR Trigger: CCTCCGAATACGTAGAGCTCACAGATGGCCTGTATA...GGGTTTGCTCTCACTGCCCCTTCCTTGAGGCAGTGGATACTGCCATGGGGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084116.13 |
||
| CDS-3UTR CCA 90 bp | TCTGGGGAACTGGACAAAGGTGACAAAGGCTGTCTTAGAAGGCTGTCTTCAAACCGGCTGAGGAGGAGGTaGGGCCGGGCTTTGCGTACC | + |
|
Preference number: 4 (lower is better) Translates to: SGELDKGDKGCLRRLSSNRLRRR*GRALRT Trigger: GGTACGCAAAGCCCGGCCCCACCTCCTCCTCAGCCG...GTTTGAAGACAGCCTTCTAAGACAGCCTTTGTCACCTTTGTCCAGTTCCCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| CDS-3UTR CCA 90 bp | TTGGAACACGGAGAAGGGAACAGACACCGGGTAGATTCTTCCTCAGTGGTAAAACGGCTGAGGAGGAGGTaGGGCCGGGCTTTGCGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LEHGEGNRHRVDSSSVVKRLRRR*GRALRT Trigger: GGTACGCAAAGCCCGGCCCCACCTCCTCCTCAGCCG...TTTTACCACTGAGGAAGAATCTACCCGGTGTCTGTTCCCTTCTCCGTGTTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
||
| CDS-3UTR CCA 90 bp | ACAATCTCGCTCATCACTTTGGAACACGGAGAAGGGAACAGACACCGGGTAGATCTCTGGGGCGTGGAGTaGTTGCGGGGGTTGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TISLITLEHGEGNRHRVDLWGVE*LRGLSR Trigger: CCTGCTCAACCCCCGCAACCACTCCACGCCCCAGAG...ATCTACCCGGTGTCTGTTCCCTTCTCCGTGTTCCAAAGTGATGAGCGAGATTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
||
| CDS-3UTR TCA 90 bp | GGTTATAACCACAGAGACAGGCTATACAAGAAAAGAGCCTTGGCAGGGCCTTTTAGTGGTTGCGGGGGTTaGGCAGGCTGCAGGTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GYNHRDRLYKKRALAGPFSGCGG*AGCRSR Trigger: CCGCGACCTGCAGCCTGCTCAACCCCCGCAACCACT...AAAAGGCCCTGCCAAGGCTCTTTTCTTGTATAGCCTGTCTCTGTGGTTATAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
||
| CDS-3UTR TCA 90 bp | CACTTTGGAACACGGAGAAGGGAACAGACACCGGGTAGATTCTTCCTCAGTGGTCACAGCCAGGAGGAGTaGACTCCGTCTGCCCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HFGTRRREQTPGRFFLSGHSQEE*TPSAPD Trigger: ATCTGGGGCAGACGGAGTTCACTCCTCCTGGCTGTG...ACCACTGAGGAAGAATCTACCCGGTGTCTGTTCCCTTCTCCGTGTTCCAAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
||
| CDS-3UTR TCA 90 bp | CACCCAAGGATCAGACCAAGGAGTTGGCACCTGGTTGCTAATGTCCACATGGCTTGTGGTTTCCTCTGGTaGGTGTACGGCGGTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HPRIRPRSWHLVANVHMACGFLW*VYGGPR Trigger: TCTGGGACCGCCGTACACTCACCAGAGGAAACCACA...AGCCATGTGGACATTAGCAACCAGGTGCCAACTCCTTGGTCTGATCCTTGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| CDS-3UTR TCA 90 bp | GGACAACCAGTCGTCAAGAGGGCTGGGGCCAAGTTTGAGACCAAAGAGCTGAAATGTGGTTTCCTCTGGTaGGTGTACGGCGGTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GQPVVKRAGAKFETKELKCGFLW*VYGGPR Trigger: TCTGGGACCGCCGTACACTCACCAGAGGAAACCACA...TTTCAGCTCTTTGGTCTCAAACTTGGCCCCAGCCCTCTTGACGACTGGTTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| CDS-3UTR GCA 90 bp | GATGCTGAGGCTGCCACAAAGATGGCACCAAGCAAAGGAGACTGGCACACTCCCGGAGTGAACTCCGTCTaGCCCAGATCACATTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DAEAATKMAPSKGDWHTPGVNSV*PRSHSR Trigger: TCTGGAATGTGATCTGGGGCAGACGGAGTTCACTCC...GGGAGTGTGCCAGTCTCCTTTGCTTGGTGCCATCTTTGTGGCAGCCTCAGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| CDS-3UTR CCA 90 bp | TCTGGGGAACTGGACAAAGGTGACAAAGGCTGTCTTAGAAGGCTGTCTTCAAACCTCTGGGGCGTGGAGTaGTTGCGGGGGTTGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGELDKGDKGCLRRLSSNLWGVE*LRGLSR Trigger: CCTGCTCAACCCCCGCAACCACTCCACGCCCCAGAG...GTTTGAAGACAGCCTTCTAAGACAGCCTTTGTCACCTTTGTCCAGTTCCCCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| CDS-3UTR CCA 90 bp | AGGGCCCCATGGCAGTATCCACTGCCTCAAGGAAGGGGCAGTGAGAGCAAACCCGTACACCATCCTCTGTaGTTTCCTCTGGTGAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RAPWQYPLPQGRGSESKPVHHPL*FPLVSV Trigger: TACACTCACCAGAGGAAACCACAGAGGATGGTGTAC...GGGTTTGCTCTCACTGCCCCTTCCTTGAGGCAGTGGATACTGCCATGGGGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR CAA 72 bp | GGCACCCAAGGATCAGACCAAGGAGTTGGCACCTGGTaGCTAATGTCCACATGGCTCAACACGCCTCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: GTQGSDQGVGTW*LMSTWLNTPLT Trigger: AGTGAGAGGCGTGTTGAGCCATGTGGACATTAGCAACCAGGTGCCAACTCCTTGGTCTGATCCTTGGGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| CDS-3UTR TCA 90 bp | GGACAACCAGTCGTCAAGAGGGCTGGGGCCAAGTTTGAGACCAAAGAGCTGAAAATGCACAGGACACGCTaGCTAACTCTTCCAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GQPVVKRAGAKFETKELKMHRTR*LTLPGH Trigger: GTGCCCTGGAAGAGTTAGTCAGCGTGTCCTGTGCAT...TTTCAGCTCTTTGGTCTCAAACTTGGCCCCAGCCCTCTTGACGACTGGTTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| CDS-3UTR GCA 90 bp | CAGTCACTCCTGGTCACAACATCCACCTGCAGTGGCCTCTGGGTCTGTCGGAGACCATGTCAATGCCTCTaGAGATACCAAAGCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QSLLVTTSTCSGLWVCRRPCQCL*RYQSPN Trigger: GTTTGGGCTTTGGTATCTGCAGAGGCATTGACATGG...TCTCCGACAGACCCAGAGGCCACTGCAGGTGGATGTTGTGACCAGGAGTGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084116.13 |
||
| CDS-3UTR CCA 90 bp | CAGCACACTTTCCAGTTCCGTGAACAGCGGGCAGGAGCAGGAGCTCGGCAGCCATCTCACTCAAGCAAATaGCTTTCTTCCTCTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QHTFQFREQRAGAGARQPSHSSK*LSSSSV Trigger: GACAGAAGAGGAAGAAAGCCATTTGCTTGAGTGAGA...TGGCTGCCGAGCTCCTGCTCCTGCCCGCTGTTCACGGAACTGGAAAGTGTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR CAA 72 bp | TCTGGGTCTGTCGGAGAAATCCTCGATAGCCAAGATTaGCCGACACCAGGCATGTATGTGTCCACTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGSVGEILDSQD*PTPGMYVSTPG Trigger: GCCTGGAGTGGACACATACATGCCTGGTGTCGGCAAATCTTGGCTATCGAGGATTTCTCCGACAGACCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| CDS-3UTR TCA 90 bp | GACAATCTCGCTCATCACTTTGGAACACGGAGAAGGGAACAGACACCGGGTAGACATCACAGGACACGCTaGCTAACTCTTCCAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DNLAHHFGTRRREQTPGRHHRTR*LTLPGH Trigger: GTGCCCTGGAAGAGTTAGTCAGCGTGTCCTGTGATG...TCTACCCGGTGTCTGTTCCCTTCTCCGTGTTCCAAAGTGATGAGCGAGATTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
||
| CDS-3UTR TCA 90 bp | AAGGTTATAACCACAGAGACAGGCTATACAAGAAAAGAGCCTTGGCAGGGCCTTCTGGGGGTAGAGGGGTaGGGATGTGGTAGGTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KVITTETGYTRKEPWQGLLGVEG*GCGRSA Trigger: AGCGGACCTACCACATCCTCACCCCTCTACCCCCAG...AAGGCCCTGCCAAGGCTCTTTTCTTGTATAGCCTGTCTCTGTGGTTATAACCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
||
| CDS-3UTR CCA 90 bp | AGGGCCCCATGGCAGTATCCACTGCCTCAAGGAAGGGGCAGTGAGAGCAAACCCATGTCCAGTGAAGACTaGAAGTGGACTAGACTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RAPWQYPLPQGRGSESKPMSSED*KWTRLF Trigger: AAAGAGTCTAGTCCACTTCCAGTCTTCACTGGACAT...GGGTTTGCTCTCACTGCCCCTTCCTTGAGGCAGTGGATACTGCCATGGGGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084116.13 |
||
| CDS-3UTR CCA 90 bp | GGCAGTATCCACTGCCTCAAGGAAGGGGCAGTGAGAGCAAACCCAGACTTAAGGCCAAACAGTCACATATaGGGTTCTGGGCAAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSIHCLKEGAVRANPDLRPNSHI*GSGQAG Trigger: TCCTGCTTGCCCAGAACCCCATATGTGACTGTTTGG...CCTTAAGTCTGGGTTTGCTCTCACTGCCCCTTCCTTGAGGCAGTGGATACTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084116.13 |
||
| 3UTR CAA 72 bp | CCTTGGTCTTTCATGATCCTGCTGGAAGGTGGAGTCTaGACAGATCCATCATGCCTGCCTGAGAAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PWSFMILLEGGV*TDPSCLPEKLL Trigger: GAGGAGCTTCTCAGGCAGGCATGATGGATCTGTCAAGACTCCACCTTCCAGCAGGATCATGAAAGACCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| 3UTR CAA 72 bp | GCAGATGGTTGTGAGTCACCATGTGGTTGTTGGGAATaGAACTCAGGACCTCTGGGAGAGCAGTCAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ADGCESPCGCWE*NSGPLGEQSVL Trigger: GAGCACTGACTGCTCTCCCAGAGGTCCTGAGTTCAATTCCCAACAACCACATGGTGACTCACAACCATCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| CDS-3UTR GCA 90 bp | GACAAAGGCTGTCTTAGAAGGCTGTCTTCAAACTCTCTGCGAGGCAGGAGAGCCACATCTTGGGGAGGCTaGCCTTGGTTGATGATATGG | + |
|
Preference number: 4 (lower is better) Translates to: DKGCLRRLSSNSLRGRRATSWGG*PWLMIW Trigger: CCATATCATCAACCAAGGGCAGCCTCCCCAAGATGT...GGCTCTCCTGCCTCGCAGAGAGTTTGAAGACAGCCTTCTAAGACAGCCTTTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| CDS-3UTR GCA 90 bp | CACTTTGGAACACGGAGAAGGGAACAGACACCGGGTAGATTCTTCCTCAGTGGTGGAGTGAACTCCGTCTaGCCCAGATCACATTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HFGTRRREQTPGRFFLSGGVNSV*PRSHSR Trigger: TCTGGAATGTGATCTGGGGCAGACGGAGTTCACTCC...ACCACTGAGGAAGAATCTACCCGGTGTCTGTTCCCTTCTCCGTGTTCCAAAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
||
| CDS-3UTR CCA 90 bp | ATACCAAAGCCCAAACAGTCACATATGGGGTTCTGGGCAAGCAGGATGGGGCCCGTACACCATCCTCTGTaGTTTCCTCTGGTGAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: IPKPKQSHMGFWASRMGPVHHPL*FPLVSV Trigger: TACACTCACCAGAGGAAACCACAGAGGATGGTGTAC...GGGCCCCATCCTGCTTGCCCAGAACCCCATATGTGACTGTTTGGGCTTTGGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
||
| CDS-3UTR TCA 90 bp | ATGGAGGTAAGCAATGGTGTAAGCCTTCCACAGCCTTGGTCTTTCATGATCCTGCATCACAGGACACGCTaGCTAACTCTTCCAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: MEVSNGVSLPQPWSFMILHHRTR*LTLPGH Trigger: GTGCCCTGGAAGAGTTAGTCAGCGTGTCCTGTGATG...CAGGATCATGAAAGACCAAGGCTGTGGAAGGCTTACACCATTGCTTACCTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084116.13 |
||
| CDS-3UTR TCA 90 bp | CACTTTGGAACACGGAGAAGGGAACAGACACCGGGTAGATTCTTCCTCAGTGGTTATACAGGCCATCTGTaGGCTCTACGTATTCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HFGTRRREQTPGRFFLSGYTGHL*ALRIRR Trigger: CCTCCGAATACGTAGAGCTCACAGATGGCCTGTATA...ACCACTGAGGAAGAATCTACCCGGTGTCTGTTCCCTTCTCCGTGTTCCAAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
||
| CDS-3UTR CCA 90 bp | AAGGTTATAACCACAGAGACAGGCTATACAAGAAAAGAGCCTTGGCAGGGCCTTTCACATATGGGGTTCTaGGCAAGCAGGATGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KVITTETGYTRKEPWQGLSHMGF*ASRMGP Trigger: GGGCCCCATCCTGCTTGCCCAGAACCCCATATGTGA...AAGGCCCTGCCAAGGCTCTTTTCTTGTATAGCCTGTCTCTGTGGTTATAACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
||
| CDS-3UTR CCA 90 bp | CTGTCTCAGAGGGAAGACACTGGAGGGGCACAGCACACTTTCCAGTTCCGTGAATCTCACTCAAGCAAATaGCTTTCTTCCTCTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSQREDTGGAQHTFQFRESHSSK*LSSSSV Trigger: GACAGAAGAGGAAGAAAGCCATTTGCTTGAGTGAGA...TTCACGGAACTGGAAAGTGTGCTGTGCCCCTCCAGTGTCTTCCCTCTGAGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| CDS-3UTR CCA 90 bp | TGTCCTTCCTCTGCCTGTTCTGAGGACACCACGGCTTTCTTCACTGCTTCACAGAATGTGGGATGGAAATaGAACCAACCAGCAGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: CPSSACSEDTTAFFTASQNVGWK*NQPADS Trigger: ACTGTCTGCTGGTTGGTTCCATTTCCATCCCACATT...CTGTGAAGCAGTGAAGAAAGCCGTGGTGTCCTCAGAACAGGCAGAGGAAGGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084116.13 |
||
| CDS-3UTR GCA 90 bp | ACACGGAGAAGGGAACAGACACCGGGTAGATTCTTCCTCAGTGGTAAAATACGGCCATGTCAATGCCTCTaGAGATACCAAAGCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TRRREQTPGRFFLSGKIRPCQCL*RYQSPN Trigger: GTTTGGGCTTTGGTATCTGCAGAGGCATTGACATGG...CCGTATTTTACCACTGAGGAAGAATCTACCCGGTGTCTGTTCCCTTCTCCGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
||
| CDS-3UTR CCA 90 bp | AGATTCTTCCTCAGTGGTAAAATACGGCTCTCAGCTCCGACAGCACGGCACCACATGTCCAGTGAAGACTaGAAGTGGACTAGACTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RFFLSGKIRLSAPTARHHMSSED*KWTRLF Trigger: AAAGAGTCTAGTCCACTTCCAGTCTTCACTGGACAT...GTGGTGCCGTGCTGTCGGAGCTGAGAGCCGTATTTTACCACTGAGGAAGAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
||
| CDS-3UTR CCA 90 bp | GACAATCTCGCTCATCACTTTGGAACACGGAGAAGGGAACAGACACCGGGTAGAAATGTGGGATGGAAATaGAACCAACCAGCAGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: DNLAHHFGTRRREQTPGRNVGWK*NQPADS Trigger: ACTGTCTGCTGGTTGGTTCCATTTCCATCCCACATT...TCTACCCGGTGTCTGTTCCCTTCTCCGTGTTCCAAAGTGATGAGCGAGATTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
||
| CDS-3UTR CCA 90 bp | CTGCAGTGGCCTCTGGGTCTGTCGGAGAAATCCTCGATAGCCAAGATTTGCCGAAAATACAATGTGGGATaGAAATGGAACCAACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQWPLGLSEKSSIAKICRKYNVG*KWNQPA Trigger: TGCTGGTTGGTTCCATTTCCATCCCACATTGTATTT...TCGGCAAATCTTGGCTATCGAGGATTTCTCCGACAGACCCAGAGGCCACTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084116.13 |
||
| CDS-3UTR CCA 90 bp | TCAGGACCTCTGGGAGAGCAGTCAGTGCTCTTAACTGCTGAGCCACCTCTCCAGCTGAAAAATACAATGTaGGATGGAAATGGAACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SGPLGEQSVLLTAEPPLQLKNTM*DGNGTN Trigger: GTTGGTTCCATTTCCATCCCACATTGTATTTTTCAG...CTGGAGAGGTGGCTCAGCAGTTAAGAGCACTGACTGCTCTCCCAGAGGTCCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084116.13 |
||
| CDS-3UTR TCA 90 bp | CACTGGAAGATCCGATGGCACCCAAGGATCAGACCAAGGAGTTGGCACCTGGTTAATTATAATCTGTGGTaGCATAAGGAACTGACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HWKIRWHPRIRPRSWHLVNYNLW*HKELTL Trigger: AAGGGTCAGTTCCTTATGTCACCACAGATTATAATT...AACCAGGTGCCAACTCCTTGGTCTGATCCTTGGGTGCCATCGGATCTTCCAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084116.13 |
||
| CDS-3UTR GCA 90 bp | AAGGTTATAACCACAGAGACAGGCTATACAAGAAAAGAGCCTTGGCAGGGCCTTACATCTTGGGGAGGCTaGCCTTGGTTGATGATATGG | + |
|
Preference number: 4 (lower is better) Translates to: KVITTETGYTRKEPWQGLTSWGG*PWLMIW Trigger: CCATATCATCAACCAAGGGCAGCCTCCCCAAGATGT...AAGGCCCTGCCAAGGCTCTTTTCTTGTATAGCCTGTCTCTGTGGTTATAACCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
||
| CDS-3UTR CCA 90 bp | GCTCATCACTTTGGAACACGGAGAAGGGAACAGACACCGGGTAGATTCTTCCTCTCTCACTCAAGCAAATaGCTTTCTTCCTCTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AHHFGTRRREQTPGRFFLSHSSK*LSSSSV Trigger: GACAGAAGAGGAAGAAAGCCATTTGCTTGAGTGAGA...GAGGAAGAATCTACCCGGTGTCTGTTCCCTTCTCCGTGTTCCAAAGTGATGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
||
| CDS-3UTR CCA 90 bp | GGTTATAACCACAGAGACAGGCTATACAAGAAAAGAGCCTTGGCAGGGCCTTTTCCAAACAGTCACATATaGGGTTCTGGGCAAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GYNHRDRLYKKRALAGPFPNSHI*GSGQAG Trigger: TCCTGCTTGCCCAGAACCCCATATGTGACTGTTTGG...AAAAGGCCCTGCCAAGGCTCTTTTCTTGTATAGCCTGTCTCTGTGGTTATAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
||
| CDS-3UTR GCA 90 bp | TCGATGCCTGCCTTCAAAAAGGTTATAACCACAGAGACAGGCTATACAAGAAAAACAGGAGCGTTCTCCTaGAGGAGCACGTATGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SMPAFKKVITTETGYTRKTGAFS*RSTYEE Trigger: CTCCTCATACGTGCTCCTGCAGGAGAACGCTCCTGT...TTTTCTTGTATAGCCTGTCTCTGTGGTTATAACCTTTTTGAAGGCAGGCATCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
||
| CDS-3UTR CCA 90 bp | GGTTATAACCACAGAGACAGGCTATACAAGAAAAGAGCCTTGGCAGGGCCTTTTGTACACCATCCTCTGTaGTTTCCTCTGGTGAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GYNHRDRLYKKRALAGPFVHHPL*FPLVSV Trigger: TACACTCACCAGAGGAAACCACAGAGGATGGTGTAC...AAAAGGCCCTGCCAAGGCTCTTTTCTTGTATAGCCTGTCTCTGTGGTTATAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
||
| 3UTR CAA 72 bp | CCAGTTTCTAGCCATACTTTCATGGTCCCGATTTTCTaGGAAAACTGCAAGGCTGTCCTTCCTCTGCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PVSSHTFMVPIF*ENCKAVLPLPV Trigger: AACAGGCAGAGGAAGGACAGCCTTGCAGTTTTCCAAGAAAATCGGGACCATGAAAGTATGGCTAGAAACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| CDS-3UTR TCA 90 bp | ACAATCTCGCTCATCACTTTGGAACACGGAGAAGGGAACAGACACCGGGTAGATTCCTCTTCTGTCTTCTaGTGCCAATTTTCTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TISLITLEHGEGNRHRVDSSSVF*CQFSSK Trigger: CTTTGAAGAAAATTGGCATCAGAAGACAGAAGAGGA...ATCTACCCGGTGTCTGTTCCCTTCTCCGTGTTCCAAAGTGATGAGCGAGATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
||
| CDS-3UTR CCA 90 bp | GGTGACAAAGGCTGTCTTAGAAGGCTGTCTTCAAACTCTCTGCGAGGCAGGAGACGTGTTGATGATAAGTaGAAACTCTCTCTTGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: GDKGCLRRLSSNSLRGRRRVDDK*KLSLVI Trigger: GATTACAAGAGAGAGTTTCCACTTATCATCAACACG...TCTCCTGCCTCGCAGAGAGTTTGAAGACAGCCTTCTAAGACAGCCTTTGTCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084116.13 |
||
| 3UTR CAA 72 bp | TATAACCACAGAGACAGGCTATACAAGAAAAGAGCCTaGGCAGGGCCTTTTATAGACAATCTCGCTCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: YNHRDRLYKKRA*AGPFIDNLAHH Trigger: GTGATGAGCGAGATTGTCTATAAAAGGCCCTGCCAAGGCTCTTTTCTTGTATAGCCTGTCTCTGTGGTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
||
| CDS-3UTR CCA 90 bp | AAGGTTATAACCACAGAGACAGGCTATACAAGAAAAGAGCCTTGGCAGGGCCTTAAATACAATGTGGGATaGAAATGGAACCAACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KVITTETGYTRKEPWQGLKYNVG*KWNQPA Trigger: TGCTGGTTGGTTCCATTTCCATCCCACATTGTATTT...AAGGCCCTGCCAAGGCTCTTTTCTTGTATAGCCTGTCTCTGTGGTTATAACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
||
| CDS-3UTR TCA 90 bp | GAAATACAATCTTCTAAGACTTGCTTACAGCACTGGAAGATCCGATGGCACCCATCCTCTTCTGTCTTCTaGTGCCAATTTTCTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EIQSSKTCLQHWKIRWHPSSSVF*CQFSSK Trigger: CTTTGAAGAAAATTGGCATCAGAAGACAGAAGAGGA...TGGGTGCCATCGGATCTTCCAGTGCTGTAAGCAAGTCTTAGAAGATTGTATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
||
| CDS-3UTR CCA 90 bp | AAGGTTATAACCACAGAGACAGGCTATACAAGAAAAGAGCCTTGGCAGGGCCTTCTGAAAAATACAATGTaGGATGGAAATGGAACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KVITTETGYTRKEPWQGLLKNTM*DGNGTN Trigger: GTTGGTTCCATTTCCATCCCACATTGTATTTTTCAG...AAGGCCCTGCCAAGGCTCTTTTCTTGTATAGCCTGTCTCTGTGGTTATAACCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
||
| CDS-3UTR CCA 90 bp | AAAAAGGTTATAACCACAGAGACAGGCTATACAAGAAAAGAGCCTTGGCAGGGCCGTGTTGATGATAAGTaGAAACTCTCTCTTGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: KKVITTETGYTRKEPWQGRVDDK*KLSLVI Trigger: GATTACAAGAGAGAGTTTCCACTTATCATCAACACG...GCCCTGCCAAGGCTCTTTTCTTGTATAGCCTGTCTCTGTGGTTATAACCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
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| 3UTR CAA 72 bp | TCTCCAAATTCTGGAATTTCAAAACCTCGATATCTTTaGATCTTGCTTTTTGTATACAGGCCATCTGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: SPNSGISKPRYL*ILLFVYRPSVS Trigger: GCTCACAGATGGCCTGTATACAAAAAGCAAGATCAAAAGATATCGAGGTTTTGAAATTCCAGAATTTGGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
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| CDS GCA 90 bp | CGGACGCGGTGCATGGCGCGGGCGGGACGCTCGGTGTGGGCGGGCTaGGGGGCGCCGGCCGGCTGCGGGCCCGGAGTTTGCACTTTACCG | + |
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Preference number: 5 (lower is better) Translates to: RTRCMARAGRSVWAG*GAPAGCGPGVCTLP Trigger: CGGTAAAGTGCAAACTCCGGGCCCGCAGCCGGCCGGCGCCCCGCAGCCCGCCCACACCGAGCGTCCCGCCCGCGCCATGCACCGCGTCCG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084116.13 ENSMUST00000103197.5 ENSMUST00000131696.3 |
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| CDS CCA 90 bp | GTGGTTGCGGGGGTTGAGCAGGCTGCAGGTCGCGGACGCGGTGCATaGCGCGGGCGGGACGCTCGGTGTGGGCGGGCTGCGGGGCGCCGG | + |
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Preference number: 5 (lower is better) Translates to: VVAGVEQAAGRGRGA*RGRDARCGRAAGRR Trigger: CCGGCGCCCCGCAGCCCGCCCACACCGAGCGTCCCGCCCGCGCCATGCACCGCGTCCGCGACCTGCAGCCTGCTCAACCCCCGCAACCAC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084116.13 ENSMUST00000103197.5 ENSMUST00000131696.3 |
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| CDS CCA 90 bp | GGCAGCATCATCAACACGCGGCCCGAGCCCAGGTCCCGCACGGGCTaGGTGACGTTCGGGGACACCTTCCGCACGGGGCGCCCGGCCCGG | + |
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Preference number: 5 (lower is better) Translates to: GSIINTRPEPRSRTG*VTFGDTFRTGRPAR Trigger: CCGGGCCGGGCGCCCCGTGCGGAAGGTGTCCCCGAACGTCACCCAGCCCGTGCGGGACCTGGGCTCGGGCCGCGTGTTGATGATGCTGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084116.13 ENSMUST00000103197.5 ENSMUST00000131696.3 |
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| CDS TCA 90 bp | GCATCATCAACACGCGGCCCGAGCCCAGGTCCCGCACGGGCTGGGTaGCGTTCGGGGACACCTTCCGCACGGGGCGCCCGGCCCGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: ASSTRGPSPGPARAG*RSGTPSARGARPGS Trigger: AGAGCCGGGCCGGGCGCCCCGTGCGGAAGGTGTCCCCGAACGTCACCCAGCCCGTGCGGGACCTGGGCTCGGGCCGCGTGTTGATGATGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084116.13 ENSMUST00000103197.5 ENSMUST00000131696.3 |
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| CDS CCA 90 bp | GTCAGGACCCCAAACCGACGGCGGCCCCGGCGGCTGAGGAGGAGGTaGGGCCGGGCTTTGCGTACCCGCAGCCAGGAAGAGCGGCTCGGA | + |
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Preference number: 5 (lower is better) Translates to: VRTPNRRRPRRLRRR*GRALRTRSQEERLG Trigger: TCCGAGCCGCTCTTCCTGGCTGCGGGTACGCAAAGCCCGGCCCCACCTCCTCCTCAGCCGCCGGGGCCGCCGTCGGTTTGGGGTCCTGAC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084116.13 ENSMUST00000103197.5 ENSMUST00000131696.3 |
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| CDS-3UTR CAA 90 bp | CAGTCACTCCTGGTCACAACATCCACCTGCAGTGGCCTCTGGGTCTGTCGGAGAGAGTGGTTGCGGGGGTaGAGCAGGCTGCAGGTCGCG | + |
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Preference number: 5 (lower is better) Translates to: QSLLVTTSTCSGLWVCRREWLRG*SRLQVA Trigger: CGCGACCTGCAGCCTGCTCAACCCCCGCAACCACTC...TCTCCGACAGACCCAGAGGCCACTGCAGGTGGATGTTGTGACCAGGAGTGACTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| CDS-3UTR CAA 90 bp | GCAGGAGCTCGGCAGCCACACAGCCCCACTCACCACAGCCCACGCAGTCTGCTGGGAGGCTGCCCTTGGTaGATGATATGGCCGTATACT | + |
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Preference number: 5 (lower is better) Translates to: AGARQPHSPTHHSPRSLLGGCPW*MIWPYT Trigger: AGTATACGGCCATATCATCAACCAAGGGCAGCCTCC...CAGCAGACTGCGTGGGCTGTGGTGAGTGGGGCTGTGTGGCTGCCGAGCTCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| CDS-3UTR CAA 90 bp | GGACAACCAGTCGTCAAGAGGGCTGGGGCCAAGTTTGAGACCAAAGAGCTGAAAAGGTGGGGCCGGGCTTaGCGTACCCGCAGCCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: GQPVVKRAGAKFETKELKRWGRA*RTRSQE Trigger: TTCCTGGCTGCGGGTACGCAAAGCCCGGCCCCACCT...TTTCAGCTCTTTGGTCTCAAACTTGGCCCCAGCCCTCTTGACGACTGGTTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| CDS-3UTR CAA 90 bp | GACAAAGGCTGTCTTAGAAGGCTGTCTTCAAACTCTCTGCGAGGCAGGAGAGCCAGGTGGGGCCGGGCTTaGCGTACCCGCAGCCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: DKGCLRRLSSNSLRGRRARWGRA*RTRSQE Trigger: TTCCTGGCTGCGGGTACGCAAAGCCCGGCCCCACCT...GGCTCTCCTGCCTCGCAGAGAGTTTGAAGACAGCCTTCTAAGACAGCCTTTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000131696.3 |
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| CDS-3UTR CAA 90 bp | ATCACTTTGGAACACGGAGAAGGGAACAGACACCGGGTAGATTCTTCCTCAGTGAGGTGGGGCCGGGCTTaGCGTACCCGCAGCCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: ITLEHGEGNRHRVDSSSVRWGRA*RTRSQE Trigger: TTCCTGGCTGCGGGTACGCAAAGCCCGGCCCCACCT...CACTGAGGAAGAATCTACCCGGTGTCTGTTCCCTTCTCCGTGTTCCAAAGTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
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| CDS GCA 90 bp | GGCCCGGATCTCCCTCCTGATCGCCTTCTCACTTTTCTCGGGTTCTaGGTACGGAACCCCATTGATGGTCAGGTAAGAGTGGGTGTAGAC | + |
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Preference number: 5 (lower is better) Translates to: GPDLPPDRLLTFLGF*VRNPIDGQVRVGVD Trigger: GTCTACACCCACTCTTACCTGACCATCAATGGGGTTCCGTACGCAGAACCCGAGAAAAGTGAGAAGGCGATCAGGAGGGAGATCCGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084116.13 ENSMUST00000103197.5 ENSMUST00000131696.3 |
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| CDS-3UTR CAA 90 bp | AAAAAGGTTATAACCACAGAGACAGGCTATACAAGAAAAGAGCCTTGGCAGGGCGAGTGGTTGCGGGGGTaGAGCAGGCTGCAGGTCGCG | + |
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Preference number: 5 (lower is better) Translates to: KKVITTETGYTRKEPWQGEWLRG*SRLQVA Trigger: CGCGACCTGCAGCCTGCTCAACCCCCGCAACCACTC...GCCCTGCCAAGGCTCTTTTCTTGTATAGCCTGTCTCTGTGGTTATAACCTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
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| CDS-3UTR CAA 90 bp | CACTTTGGAACACGGAGAAGGGAACAGACACCGGGTAGATTCTTCCTCAGTGGTGGAGGCTGCCCTTGGTaGATGATATGGCCGTATACT | + |
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Preference number: 5 (lower is better) Translates to: HFGTRRREQTPGRFFLSGGGCPW*MIWPYT Trigger: AGTATACGGCCATATCATCAACCAAGGGCAGCCTCC...ACCACTGAGGAAGAATCTACCCGGTGTCTGTTCCCTTCTCCGTGTTCCAAAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
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| CDS-3UTR CAA 90 bp | CGCAGCCCATTATCTGACACCCAGCCCATCGTGTTGATGATAAGTGGAAACTCTGGAGGCTGCCCTTGGTaGATGATATGGCCGTATACT | + |
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Preference number: 5 (lower is better) Translates to: RSPLSDTQPIVLMISGNSGGCPW*MIWPYT Trigger: AGTATACGGCCATATCATCAACCAAGGGCAGCCTCC...AGAGTTTCCACTTATCATCAACACGATGGGCTGGGTGTCAGATAATGGGCTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131696.3 |
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| CDS-3UTR CAA 90 bp | CCTCCTGTCTCAGAGGGAAGACACTGGAGGGGCACAGCACACTTTCCAGTTCCGCGATATCTTTTGATCTaGCTTTTTGTATACAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: PPVSEGRHWRGTAHFPVPRYLLI*LFVYRP Trigger: TGGCCTGTATACAAAAAGCAAGATCAAAAGATATCG...CGGAACTGGAAAGTGTGCTGTGCCCCTCCAGTGTCTTCCCTCTGAGACAGGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084116.13 |
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| CDS-3UTR CAA 90 bp | CAGAGGGAAGACACTGGAGGGGCACAGCACACTTTCCAGTTCCGTGAACAGCGGCTCCAATTTTCTCTGTaGCTCCAGGGATATTTAAAT | + |
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Preference number: 5 (lower is better) Translates to: QREDTGGAQHTFQFREQRLQFSL*LQGYLN Trigger: ATTTAAATATCCCTGGAGCAACAGAGAAAATTGGAG...CCGCTGTTCACGGAACTGGAAAGTGTGCTGTGCCCCTCCAGTGTCTTCCCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084116.13 |
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| CDS CCA 90 bp | GTAGTCATTGTAACAGTTCATCTTCCCATAGTACACCATCCTCTGTaGTTTCCTCTGGTGAGTGTACGGCGGTCCCAGAAGTGGTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: VVIVTVHLPIVHHPL*FPLVSVRRSQKWFC Trigger: ACAGAACCACTTCTGGGACCGCCGTACACTCACCAGAGGAAACCACAGAGGATGGTGTACTATGGGAAGATGAACTGTTACAATGACTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000103197.5 |
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| CDS-3UTR CAA 90 bp | ATACAAGGCCCTCCTGTCTCAGAGGGAAGACACTGGAGGGGCACAGCACACTTTTCTCGAAAAATCCTGTaGTATTTGGCCCTGTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: IQGPPVSEGRHWRGTAHFSRKIL*YLALFF Trigger: AAAGAACAGGGCCAAATACAACAGGATTTTTCGAGA...AAAGTGTGCTGTGCCCCTCCAGTGTCTTCCCTCTGAGACAGGAGGGCCTTGTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084116.13 |
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| CDS-3UTR CAA 90 bp | AAGGTTATAACCACAGAGACAGGCTATACAAGAAAAGAGCCTTGGCAGGGCCTTTCTCGAAAAATCCTGTaGTATTTGGCCCTGTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: KVITTETGYTRKEPWQGLSRKIL*YLALFF Trigger: AAAGAACAGGGCCAAATACAACAGGATTTTTCGAGA...AAGGCCCTGCCAAGGCTCTTTTCTTGTATAGCCTGTCTCTGTGGTTATAACCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
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| CDS-3UTR CAA 90 bp | TCGATGCCTGCCTTCAAAAAGGTTATAACCACAGAGACAGGCTATACAAGAAAACGATATCTTTTGATCTaGCTTTTTGTATACAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: SMPAFKKVITTETGYTRKRYLLI*LFVYRP Trigger: TGGCCTGTATACAAAAAGCAAGATCAAAAGATATCG...TTTTCTTGTATAGCCTGTCTCTGTGGTTATAACCTTTTTGAAGGCAGGCATCGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
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| CDS TCA 72 bp | ACACGCGGCCCGAGCCCAGGTCCCGCACGGGCTGGGTaGCGTTCGGGGACACCTTCCGCACGGGGCGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: TRGPSPGPARAG*RSGTPSARGAR Trigger: CCGGGCGCCCCGTGCGGAAGGTGTCCCCGAACGTCACCCAGCCCGTGCGGGACCTGGGCTCGGGCCGCGTGT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084116.13 ENSMUST00000103197.5 ENSMUST00000131696.3 |
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| CDS GCA 72 bp | CGCTCGGTGTGGGCGGGCTGCGGGGCGCCGGCCGGCTaGGGGCCCGGAGTTTGCACTTTACCGCCACGTGCG | + |
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Preference number: 6 (lower is better) Translates to: RSVWAGCGAPAG*GPGVCTLPPRA Trigger: CGCACGTGGCGGTAAAGTGCAAACTCCGGGCCCGCAGCCGGCCGGCGCCCCGCAGCCCGCCCACACCGAGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084116.13 ENSMUST00000103197.5 ENSMUST00000131696.3 |
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| CDS CCA 72 bp | GGGGTTGAGCAGGCTGCAGGTCGCGGACGCGGTGCATaGCGCGGGCGGGACGCTCGGTGTGGGCGGGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: GVEQAAGRGRGA*RGRDARCGRAA Trigger: CGCAGCCCGCCCACACCGAGCGTCCCGCCCGCGCCATGCACCGCGTCCGCGACCTGCAGCCTGCTCAACCCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084116.13 ENSMUST00000103197.5 ENSMUST00000131696.3 |
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| CDS TCA 72 bp | CGGCCCGGCTCTGGGGCGTGGAGTGGTTGCGGGGGTTaGGCAGGCTGCAGGTCGCGGACGCGGTGCATGGCG | + |
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Preference number: 6 (lower is better) Translates to: RPGSGAWSGCGG*AGCRSRTRCMA Trigger: CGCCATGCACCGCGTCCGCGACCTGCAGCCTGCTCAACCCCCGCAACCACTCCACGCCCCAGAGCCGGGCCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084116.13 ENSMUST00000103197.5 ENSMUST00000131696.3 |
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| CDS CAA 72 bp | CCGGCCCGGCTCTGGGGCGTGGAGTGGTTGCGGGGGTaGAGCAGGCTGCAGGTCGCGGACGCGGTGCATGGC | + |
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Preference number: 6 (lower is better) Translates to: PARLWGVEWLRG*SRLQVADAVHG Trigger: GCCATGCACCGCGTCCGCGACCTGCAGCCTGCTCAACCCCCGCAACCACTCCACGCCCCAGAGCCGGGCCGG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084116.13 ENSMUST00000103197.5 ENSMUST00000131696.3 |
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| CDS CCA 72 bp | ATCAACACGCGGCCCGAGCCCAGGTCCCGCACGGGCTaGGTGACGTTCGGGGACACCTTCCGCACGGGGCGC | + |
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Preference number: 6 (lower is better) Translates to: INTRPEPRSRTG*VTFGDTFRTGR Trigger: GCGCCCCGTGCGGAAGGTGTCCCCGAACGTCACCCAGCCCGTGCGGGACCTGGGCTCGGGCCGCGTGTTGAT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084116.13 ENSMUST00000103197.5 ENSMUST00000131696.3 |
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| CDS GCA 72 bp | CTCCCTCCTGATCGCCTTCTCACTTTTCTCGGGTTCTaGGTACGGAACCCCATTGATGGTCAGGTAAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: LPPDRLLTFLGF*VRNPIDGQVRV Trigger: CACTCTTACCTGACCATCAATGGGGTTCCGTACGCAGAACCCGAGAAAAGTGAGAAGGCGATCAGGAGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084116.13 ENSMUST00000103197.5 ENSMUST00000131696.3 |
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| CDS CCA 72 bp | GTAACAGTTCATCTTCCCATAGTACACCATCCTCTGTaGTTTCCTCTGGTGAGTGTACGGCGGTCCCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: VTVHLPIVHHPL*FPLVSVRRSQK Trigger: CTTCTGGGACCGCCGTACACTCACCAGAGGAAACCACAGAGGATGGTGTACTATGGGAAGATGAACTGTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084116.13 ENSMUST00000103197.5 |
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| CDS CAA 72 bp | CTGATGCCAATTTTCTTCAAAGTTGTAAACTCAGAATaGACCCGAACAGGAGCGTTCTCCTGCAGGAGCACG | + |
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Preference number: 6 (lower is better) Translates to: LMPIFFKVVNSE*TRTGAFSCRST Trigger: CGTGCTCCTGCAGGAGAACGCTCCTGTTCGGGTCAATTCTGAGTTTACAACTTTGAAGAAAATTGGCATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084116.13 ENSMUST00000103197.5 ENSMUST00000131696.3 |
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| CDS CAA 90 bp | TTCTGTCTTCTGATGCCAATTTTCTTCAAAGTTGTAAACTCAGAATaGACCCGAACAGGAGCGTTCTCCTGCAGGAGCACGTATGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: FCLLMPIFFKVVNSE*TRTGAFSCRSTYEE Trigger: CTCCTCATACGTGCTCCTGCAGGAGAACGCTCCTGTTCGGGTCAATTCTGAGTTTACAACTTTGAAGAAAATTGGCATCAGAAGACAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084116.13 ENSMUST00000103197.5 ENSMUST00000131696.3 |
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| CDS CCA 72 bp | AAAGCTGGTTCTGAAAAATACAATGTGGGATGGAAATaGAACCAACCAGCAGACAGTTCACAGTTTTTAACT | + |
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Preference number: 6 (lower is better) Translates to: KAGSEKYNVGWK*NQPADSSQFLT Trigger: AGTTAAAAACTGTGAACTGTCTGCTGGTTGGTTCCATTTCCATCCCACATTGTATTTTTCAGAACCAGCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103197.5 |
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