RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NOL8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021392

Ensembl transcript IDs: ENSMUST00000021824.8, ENSMUST00000221083.2, ENSMUST00000221142.2, ENSMUST00000222197.2, ENSMUST00000222333.2, ENSMUST00000223264.2, ENSMUST00000223467.2

Found 333 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp AGCCTCCTGTCAGGAGTGAAGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTAATTCTGGGCTCAAATaGTCCTCCCACTTCCCCTTC +
Preference number: 2 (lower is better)
Translates to: SLLSGVKNKNGCCSEVGCNSGLK*SSHFPF
Trigger: GAAGGGGAAGTGGGAGGATCATTTGAGCCCAGAATT...ACACCCCACCTCAGAACAGCATCCATTCTTGTTCTTCACTCCTGACAGGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
3UTR-3UTR TCA 90 bp AGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGGCTCAAATGATCCTCCCATCTTTCAAGGGCTGGTaGGCAGTCTGCACATTCAAT +
Preference number: 2 (lower is better)
Translates to: RWGVAQCDLKFWAQMILPSFKGW*AVCTFN
Trigger: ATTGAATGTGCAGACTGCTCACCAGCCCTTGAAAGA...TGGGAGGATCATTTGAGCCCAGAATTTGAGATCACACTGAGCAACACCCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
3UTR-3UTR TCA 90 bp TCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCATCTTTCAAGGGCTGGTaGGCAGTCTGCACATTCAAT +
Preference number: 2 (lower is better)
Translates to: SNDPPTSPSKVLRLYCVSSFKGW*AVCTFN
Trigger: ATTGAATGTGCAGACTGCTCACCAGCCCTTGAAAGA...TGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
3UTR-3UTR TCA 90 bp CACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATTCTTTCAAGGGCTGGTaGGCAGTCTGCACATTCAAT +
Preference number: 2 (lower is better)
Translates to: HSHQGGNVYEFHRNSHQNSFKGW*AVCTFN
Trigger: ATTGAATGTGCAGACTGCTCACCAGCCCTTGAAAGA...ATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
3UTR-3UTR TCA 90 bp GTGTCACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATATCTTTCAAGGGCTGGTaGGCAGTCTGCACATTCAAT +
Preference number: 2 (lower is better)
Translates to: VSQLTQLILTQSSRRECISFKGW*AVCTFN
Trigger: ATTGAATGTGCAGACTGCTCACCAGCCCTTGAAAGA...TATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGTGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
3UTR CCA 72 bp CTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTaGGCTCAAATGATCCTCCCACTTCCCCTTCTAAAG +
Preference number: 3 (lower is better)
Translates to: LRWGVAQCDLKF*AQMILPLPLLK
Trigger: CTTTAGAAGGGGAAGTGGGAGGATCATTTGAGCCCAGAATTTGAGATCACACTGAGCAACACCCCACCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
3UTR TCA 72 bp CCTGTCAGGAGTGAAGAACAAGAATGGATGCTGTTCTaGGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCT +
Preference number: 3 (lower is better)
Translates to: PVRSEEQEWMLF*GGVLLSVISNS
Trigger: AGAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGTTCTTCACTCCTGACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
3UTR TCA 72 bp GAATGCTTTTCTGGGTTAATTTCTTTCAAGGGCTGGTaGGCAGTCTGCACATTCAATTCCAAAACCAAAGCT +
Preference number: 3 (lower is better)
Translates to: ECFSGLISFKGW*AVCTFNSKTKA
Trigger: AGCTTTGGTTTTGGAATTGAATGTGCAGACTGCTCACCAGCCCTTGAAAGAAATTAACCCAGAAAAGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp AGCCTCCTGTCAGGAGTGAAGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTCCTGGAAACTTCCGATaGCTGCCAGCCAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: SLLSGVKNKNGCCSEVGCPGNFR*LPANCS
Trigger: GGAGCAGTTGGCTGGCAGTCATCGGAAGTTTCCAGG...ACACCCCACCTCAGAACAGCATCCATTCTTGTTCTTCACTCCTGACAGGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp CCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCACAACTGACTACTTCCCTGGCTTTCTaGCATGCTGCCAAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: PPTSPSKVLRLYCVSQLTTSLAF*HAAKAA
Trigger: GGCCGCCTTGGCAGCATGGCAGAAAGCCAGGGAAGT...AGTCAGTTGTGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp TCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCACCAGCTGGGCTTTTCTaGGGGTCTTCCCTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: SNDPPTSPSKVLRLYCVSPAGLF*GSSLGD
Trigger: GTCTCCCAGGGAAGACCCTCAGAAAAGCCCAGCTGG...TGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp ACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCACTTCCCTGGCTTTCTaGCATGCTGCCAAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: TRMDAVLRWGVAQCDLKFTSLAF*HAAKAA
Trigger: GGCCGCCTTGGCAGCATGGCAGAAAGCCAGGGAAGT...GAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp TCAAGGGCTGGTGAGCAGTCTGCACATTCAATTCCAAAACCAAAGCTGACAATGCCTGGAAACTTCCGATaGCTGCCAGCCAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: SRAGEQSAHSIPKPKLTMPGNFR*LPANCS
Trigger: GGAGCAGTTGGCTGGCAGTCATCGGAAGTTTCCAGG...CATTGTCAGCTTTGGTTTTGGAATTGAATGTGCAGACTGCTCACCAGCCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp GGCTCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGGGACAGCTTTGCTCCTaGGTGGATGTCTCTTCCGTT +
Preference number: 4 (lower is better)
Translates to: GSNDPPTSPSKVLRLYCVGQLCS*VDVSSV
Trigger: AACGGAAGAGACATCCACTCAGGAGCAAAGCTGTCC...CACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp AGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGGCTCAAATGATCCTCCCACACTGTCACTGCCACTaGAGTCAGGTGGAAATTTGG +
Preference number: 4 (lower is better)
Translates to: RWGVAQCDLKFWAQMILPHCHCH*SQVEIW
Trigger: CCAAATTTCCACCTGACTCCAGTGGCAGTGACAGTG...TGGGAGGATCATTTGAGCCCAGAATTTGAGATCACACTGAGCAACACCCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp CCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCACAACTGACTCACTGTCACTGCCACTaGAGTCAGGTGGAAATTTGG +
Preference number: 4 (lower is better)
Translates to: PPTSPSKVLRLYCVSQLTHCHCH*SQVEIW
Trigger: CCAAATTTCCACCTGACTCCAGTGGCAGTGACAGTG...AGTCAGTTGTGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp AGCCTCCTGTCAGGAGTGAAGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTCTCACTGTCTTTTCCTaGAAACTTCCGATGACTGCC +
Preference number: 4 (lower is better)
Translates to: SLLSGVKNKNGCCSEVGCLTVFS*KLPMTA
Trigger: GGCAGTCATCGGAAGTTTCCAGGAAAAGACAGTGAG...ACACCCCACCTCAGAACAGCATCCATTCTTGTTCTTCACTCCTGACAGGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp TCAAGGGCTGGTGAGCAGTCTGCACATTCAATTCCAAAACCAAAGCTGACAATGGGACAGCTTTGCTCCTaGGTGGATGTCTCTTCCGTT +
Preference number: 4 (lower is better)
Translates to: SRAGEQSAHSIPKPKLTMGQLCS*VDVSSV
Trigger: AACGGAAGAGACATCCACTCAGGAGCAAAGCTGTCC...CATTGTCAGCTTTGGTTTTGGAATTGAATGTGCAGACTGCTCACCAGCCCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp AGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGGCTCAAATGATCCTCCCAGGGCTTGGCTTGCTATaGTCTGCTTCTTCAGCAATA +
Preference number: 4 (lower is better)
Translates to: RWGVAQCDLKFWAQMILPGLGLL*SASSAI
Trigger: TATTGCTGAAGAAGCAGATCATAGCAAGCCAAGCCC...TGGGAGGATCATTTGAGCCCAGAATTTGAGATCACACTGAGCAACACCCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp CCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCACAACTGACTGGGCTTGGCTTGCTATaGTCTGCTTCTTCAGCAATA +
Preference number: 4 (lower is better)
Translates to: PPTSPSKVLRLYCVSQLTGLGLL*SASSAI
Trigger: TATTGCTGAAGAAGCAGATCATAGCAAGCCAAGCCC...AGTCAGTTGTGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp TCAAGGGCTGGTGAGCAGTCTGCACATTCAATTCCAAAACCAAAGCTGACAATGGGTCTGTCTCAGAAATaGCCTGTCCAAGTCCACCCA +
Preference number: 4 (lower is better)
Translates to: SRAGEQSAHSIPKPKLTMGLSQK*PVQVHP
Trigger: TGGGTGGACTTGGACAGGGCATTTCTGAGACAGACC...CATTGTCAGCTTTGGTTTTGGAATTGAATGTGCAGACTGCTCACCAGCCCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp CCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCACAACTGACTGAATGCACTGTTGTCTaGCATTGTACAGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: PPTSPSKVLRLYCVSQLTECTVV*HCTGHQ
Trigger: CTGGTGACCTGTACAATGGCAGACAACAGTGCATTC...AGTCAGTTGTGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp GGCTCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGATGACCATCCAAATTTaGCAGGGCACTATGCACCAG +
Preference number: 4 (lower is better)
Translates to: GSNDPPTSPSKVLRLYCVMTIQI*QGTMHQ
Trigger: CTGGTGCATAGTGCCCTGGCAAATTTGGATGGTCAT...CACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp GGCTCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGGCGGCCAATCGCTTCTaGTTGTCTTCAGCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: GSNDPPTSPSKVLRLYCVAANRF*LSSACL
Trigger: TAAACAAGCTGAAGACAACCAGAAGCGATTGGCCGC...CACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp AGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGGCTCAAATGATCCTCCCACCAAATCTGCCGAACTaGTTTTGTAGGTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: RWGVAQCDLKFWAQMILPPNLPN*FCRSVS
Trigger: TGAGACAGACCTACAAAATCAGTTCGGCAGATTTGG...TGGGAGGATCATTTGAGCCCAGAATTTGAGATCACACTGAGCAACACCCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp AGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAAGACAGCCTATTCCCTTaGAGGCCTGGAATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: RTRMDAVLRWGVAQCDLKDSLFP*RPGILA
Trigger: AGCCAAAATTCCAGGCCTTCAAGGGAATAGGCTGTC...TTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp AGCCTCCTGTCAGGAGTGAAGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTGGCATCTATCAAGATTaGTGGAAACGTTTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: SLLSGVKNKNGCCSEVGCGIYQD*WKRFPE
Trigger: CTCTGGAAAACGTTTCCAGCAATCTTGATAGATGCC...ACACCCCACCTCAGAACAGCATCCATTCTTGTTCTTCACTCCTGACAGGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021824.8
CDS-3UTR GCA 90 bp AGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGGAATGCACTGTTGTCTaGCATTGTACAGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: RMDAVLRWGVAQCDLKFWECTVV*HCTGHQ
Trigger: CTGGTGACCTGTACAATGGCAGACAACAGTGCATTC...CCAGAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp AGCCTCCTGTCAGGAGTGAAGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTCTGTTGGCACTAAGATaGAGGGATGTTTTAGCTTTC +
Preference number: 4 (lower is better)
Translates to: SLLSGVKNKNGCCSEVGCLLALR*RDVLAF
Trigger: GAAAGCTAAAACATCCCTGCATCTTAGTGCCAACAG...ACACCCCACCTCAGAACAGCATCCATTCTTGTTCTTCACTCCTGACAGGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp CCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCACAACTGACTAGTCTTCATCATCACTaGTGTCAAACAGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PPTSPSKVLRLYCVSQLTSLHHH*CQTASQ
Trigger: CTGGGAAGCTGTTTGACAGCAGTGATGATGAAGACT...AGTCAGTTGTGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp AGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGGCTCAAATGATCCTCCCAAGTCTTCATCATCACTaGTGTCAAACAGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: RWGVAQCDLKFWAQMILPSLHHH*CQTASQ
Trigger: CTGGGAAGCTGTTTGACAGCAGTGATGATGAAGACT...TGGGAGGATCATTTGAGCCCAGAATTTGAGATCACACTGAGCAACACCCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp TCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCACTCCAGGGCTTGGCTTaGTATGATCTGCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SNDPPTSPSKVLRLYCVSLQGLA*YDLLLQ
Trigger: CTGAAGAAGCAGATCATAGCAAGCCAAGCCCTGGAG...TGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp AGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAACACTGTCACTGCCACTaGAGTCAGGTGGAAATTTGG +
Preference number: 4 (lower is better)
Translates to: RTRMDAVLRWGVAQCDLKHCHCH*SQVEIW
Trigger: CCAAATTTCCACCTGACTCCAGTGGCAGTGACAGTG...TTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp TCAAGGGCTGGTGAGCAGTCTGCACATTCAATTCCAAAACCAAAGCTGACAATGTTCAGACTCATTGACTaGGGAATGCCCAGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: SRAGEQSAHSIPKPKLTMFRLID*GMPRFL
Trigger: GAGAAACCTGGGCATTCCTCAGTCAATGAGTCTGAA...CATTGTCAGCTTTGGTTTTGGAATTGAATGTGCAGACTGCTCACCAGCCCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp ACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTTCAGACTCATTGACTaGGGAATGCCCAGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: TRMDAVLRWGVAQCDLKFFRLID*GMPRFL
Trigger: GAGAAACCTGGGCATTCCTCAGTCAATGAGTCTGAA...GAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp CCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCACAACTGACTTCCATGACACAGGGCTaGTTCTTTGTTGCTGTTAAT +
Preference number: 4 (lower is better)
Translates to: PPTSPSKVLRLYCVSQLTSMTQG*FFVAVN
Trigger: ATTAACAGCAACAAAGAATCAGCCCTGTGTCATGGA...AGTCAGTTGTGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp CCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCACAACTGACTACAAACTTTACTCCATaGCACAGGGCTGATTCTTTG +
Preference number: 4 (lower is better)
Translates to: PPTSPSKVLRLYCVSQLTTNFTP*HRADSL
Trigger: CAAAGAATCAGCCCTGTGTCATGGAGTAAAGTTTGT...AGTCAGTTGTGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp AGCCTCCTGTCAGGAGTGAAGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTCAAAGTTTTGTCTACTaGCTCCTTTGCATAGAGACA +
Preference number: 4 (lower is better)
Translates to: SLLSGVKNKNGCCSEVGCQSFVY*LLCIET
Trigger: TGTCTCTATGCAAAGGAGTCAGTAGACAAAACTTTG...ACACCCCACCTCAGAACAGCATCCATTCTTGTTCTTCACTCCTGACAGGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp AGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATCCAGCTGGGCTTTTCTaGGGGTCTTCCCTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: SHQGGNVYEFHRNSHQNDPAGLF*GSSLGD
Trigger: GTCTCCCAGGGAAGACCCTCAGAAAAGCCCAGCTGG...ATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp GTGTCACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACCAGCTGGGCTTTTCTaGGGGTCTTCCCTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: VSQLTQLILTQSSRRECIPAGLF*GSSLGD
Trigger: GTCTCCCAGGGAAGACCCTCAGAAAAGCCCAGCTGG...TATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGTGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp TCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCAGTCCTCCTTGGAATCTaGGTCTTCATCATCACTGCT +
Preference number: 4 (lower is better)
Translates to: SNDPPTSPSKVLRLYCVSVLLGI*VFIITA
Trigger: AGCAGTGATGATGAAGACTCAGATTCCAAGGAGGAC...TGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp GGCTCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCATTGACTGAGGAATaGCCAGGTTTCTCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GSNDPPTSPSKVLRLYCVSLTEE*PGFSLF
Trigger: AAACAGAGAGAAACCTGGGCATTCCTCAGTCAATGA...CACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp TCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCAGAATGCACTGTTGTCTaGCATTGTACAGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: SNDPPTSPSKVLRLYCVSECTVV*HCTGHQ
Trigger: CTGGTGACCTGTACAATGGCAGACAACAGTGCATTC...TGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp GGCTCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGCTGTTGGCACTAAGATaGAGGGATGTTTTAGCTTTC +
Preference number: 4 (lower is better)
Translates to: GSNDPPTSPSKVLRLYCVLLALR*RDVLAF
Trigger: GAAAGCTAAAACATCCCTGCATCTTAGTGCCAACAG...CACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp AGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGGCTCAAATGATCCTCCCACTGTTGGCACTAAGATaGAGGGATGTTTTAGCTTTC +
Preference number: 4 (lower is better)
Translates to: RWGVAQCDLKFWAQMILPLLALR*RDVLAF
Trigger: GAAAGCTAAAACATCCCTGCATCTTAGTGCCAACAG...TGGGAGGATCATTTGAGCCCAGAATTTGAGATCACACTGAGCAACACCCCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp AGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATACTTCCCTGGCTTTCTaGCATGCTGCCAAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: SHQGGNVYEFHRNSHQNDTSLAF*HAAKAA
Trigger: GGCCGCCTTGGCAGCATGGCAGAAAGCCAGGGAAGT...ATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp GTGTCACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATAACTTCCCTGGCTTTCTaGCATGCTGCCAAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: VSQLTQLILTQSSRRECITSLAF*HAAKAA
Trigger: GGCCGCCTTGGCAGCATGGCAGAAAGCCAGGGAAGT...TATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGTGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp AGCCTCCTGTCAGGAGTGAAGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGGCTTGCTATGATCTaGTTCTTCAGCAATATCTTC +
Preference number: 4 (lower is better)
Translates to: SLLSGVKNKNGCCSEVGCWLAMI*FFSNIF
Trigger: GAAGATATTGCTGAAGAAGCAGATCATAGCAAGCCA...ACACCCCACCTCAGAACAGCATCCATTCTTGTTCTTCACTCCTGACAGGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp AGCCTCCTGTCAGGAGTGAAGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTCGAGGTTGCTTAAATTaGTCCTCTCTTTCTCTAAAG +
Preference number: 4 (lower is better)
Translates to: SLLSGVKNKNGCCSEVGCRGCLN*SSLSLK
Trigger: CTTTAGAGAAAGAGAGGACCAATTTAAGCAACCTCG...ACACCCCACCTCAGAACAGCATCCATTCTTGTTCTTCACTCCTGACAGGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp TCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCATCTGAGGGTCTTCCCTaGGAGACACCTTTGATGATT +
Preference number: 4 (lower is better)
Translates to: SNDPPTSPSKVLRLYCVSSEGLP*ETPLMI
Trigger: AATCATCAAAGGTGTCTCCCAGGGAAGACCCTCAGA...TGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp TCAAGGGCTGGTGAGCAGTCTGCACATTCAATTCCAAAACCAAAGCTGACAATGTCTGAGGGTCTTCCCTaGGAGACACCTTTGATGATT +
Preference number: 4 (lower is better)
Translates to: SRAGEQSAHSIPKPKLTMSEGLP*ETPLMI
Trigger: AATCATCAAAGGTGTCTCCCAGGGAAGACCCTCAGA...CATTGTCAGCTTTGGTTTTGGAATTGAATGTGCAGACTGCTCACCAGCCCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp TCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCAGCGGCCAATCGCTTCTaGTTGTCTTCAGCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: SNDPPTSPSKVLRLYCVSAANRF*LSSACL
Trigger: TAAACAAGCTGAAGACAACCAGAAGCGATTGGCCGC...TGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp TCAAGGGCTGGTGAGCAGTCTGCACATTCAATTCCAAAACCAAAGCTGACAATGGCGGCCAATCGCTTCTaGTTGTCTTCAGCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: SRAGEQSAHSIPKPKLTMAANRF*LSSACL
Trigger: TAAACAAGCTGAAGACAACCAGAAGCGATTGGCCGC...CATTGTCAGCTTTGGTTTTGGAATTGAATGTGCAGACTGCTCACCAGCCCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp TCAAGGGCTGGTGAGCAGTCTGCACATTCAATTCCAAAACCAAAGCTGACAATGCCAAATCTGCCGAACTaGTTTTGTAGGTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: SRAGEQSAHSIPKPKLTMPNLPN*FCRSVS
Trigger: TGAGACAGACCTACAAAATCAGTTCGGCAGATTTGG...CATTGTCAGCTTTGGTTTTGGAATTGAATGTGCAGACTGCTCACCAGCCCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp CCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCACAACTGACTAGTCACAGGATGTGTTaGTTTGTTCTTCTCCATTAC +
Preference number: 4 (lower is better)
Translates to: PPTSPSKVLRLYCVSQLTSHRMC*FVLLHY
Trigger: GTAATGGAGAAGAACAAATCAACACATCCTGTGACT...AGTCAGTTGTGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp AGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGGCTCAAATGATCCTCCCAAGTCACAGGATGTGTTaGTTTGTTCTTCTCCATTAC +
Preference number: 4 (lower is better)
Translates to: RWGVAQCDLKFWAQMILPSHRMC*FVLLHY
Trigger: GTAATGGAGAAGAACAAATCAACACATCCTGTGACT...TGGGAGGATCATTTGAGCCCAGAATTTGAGATCACACTGAGCAACACCCCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp GTGTCACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACCTGGAAACTTCCGATaGCTGCCAGCCAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: VSQLTQLILTQSSRRECIPGNFR*LPANCS
Trigger: GGAGCAGTTGGCTGGCAGTCATCGGAAGTTTCCAGG...TATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGTGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCCAGCTGGGCTTTTCTaGGGGTCTTCCCTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: QLTQLILTQSSRRECIRIPAGLF*GSSLGD
Trigger: GTCTCCCAGGGAAGACCCTCAGAAAAGCCCAGCTGG...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp TCAAGGGCTGGTGAGCAGTCTGCACATTCAATTCCAAAACCAAAGCTGACAATGTTTTTGTCCTCTGGATaGCCATCCAAATTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SRAGEQSAHSIPKPKLTMFLSSG*PSKFAR
Trigger: CCTGGCAAATTTGGATGGTCATCCAGAGGACAAAAA...CATTGTCAGCTTTGGTTTTGGAATTGAATGTGCAGACTGCTCACCAGCCCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp CCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCACAACTGACTACAACCCAATTTTTATaGCCTGGTACTTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: PPTSPSKVLRLYCVSQLTTTQFL*PGTSVP
Trigger: TGGAACAGAAGTACCAGGGCATAAAAATTGGGTTGT...AGTCAGTTGTGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp AGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGGCTCAAATGATCCTCCCACAAGAGATTCGAGGTTaGTTAAATTGGTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: RWGVAQCDLKFWAQMILPQEIRG*LNWSSL
Trigger: AAGAGAGGACCAATTTAAGCAACCTCGAATCTCTTG...TGGGAGGATCATTTGAGCCCAGAATTTGAGATCACACTGAGCAACACCCCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp ACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCAGTCTTCATCATCACTaGTGTCAAACAGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: TRMDAVLRWGVAQCDLKFSLHHH*CQTASQ
Trigger: CTGGGAAGCTGTTTGACAGCAGTGATGATGAAGACT...GAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp TCAAGGGCTGGTGAGCAGTCTGCACATTCAATTCCAAAACCAAAGCTGACAATGGCCTTGCATGGATGTTaGGCATCTATCAAGATTGCT +
Preference number: 4 (lower is better)
Translates to: SRAGEQSAHSIPKPKLTMALHGC*ASIKIA
Trigger: AGCAATCTTGATAGATGCCCAACATCCATGCAAGGC...CATTGTCAGCTTTGGTTTTGGAATTGAATGTGCAGACTGCTCACCAGCCCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021824.8
ENSMUST00000222197.2
CDS-3UTR CCA 90 bp AGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAACTCTGTTGCCTTGCATaGATGTTGGGCATCTATCAA +
Preference number: 4 (lower is better)
Translates to: RTRMDAVLRWGVAQCDLKLCCLA*MLGIYQ
Trigger: TTGATAGATGCCCAACATCCATGCAAGGCAACAGAG...TTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021824.8
CDS-3UTR CCA 90 bp AGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGGCTCAAATGATCCTCCCATCTTTTCCAATAAGGTaGGGTTGCCTGTTGTTGATT +
Preference number: 4 (lower is better)
Translates to: RWGVAQCDLKFWAQMILPSFPIR*GCLLLI
Trigger: AATCAACAACAGGCAACCCCACCTTATTGGAAAAGA...TGGGAGGATCATTTGAGCCCAGAATTTGAGATCACACTGAGCAACACCCCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp AGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGACCTTCTTTGCAGGTTaGCATGAAGTCAGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: RMDAVLRWGVAQCDLKFWTFFAG*HEVSLL
Trigger: AAGCAAACTGACTTCATGCCAACCTGCAAAGAAGGT...CCAGAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp AGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATCTTCTGCACTTTCTTaGCCTTTTGAGGAGGGATAT +
Preference number: 4 (lower is better)
Translates to: RTRMDAVLRWGVAQCDLKSSALS*PFEEGY
Trigger: ATATCCCTCCTCAAAAGGTCAAGAAAGTGCAGAAGA...TTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp AGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGAGTCCTTTCTGGTTGTaGAGATTCTGCACTGTTTTT +
Preference number: 4 (lower is better)
Translates to: RMDAVLRWGVAQCDLKFWSPFWL*RFCTVF
Trigger: AAAAACAGTGCAGAATCTTCACAACCAGAAAGGACT...CCAGAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp TCAAGGGCTGGTGAGCAGTCTGCACATTCAATTCCAAAACCAAAGCTGACAATGTCCATGACACAGGGCTaGTTCTTTGTTGCTGTTAAT +
Preference number: 4 (lower is better)
Translates to: SRAGEQSAHSIPKPKLTMSMTQG*FFVAVN
Trigger: ATTAACAGCAACAAAGAATCAGCCCTGTGTCATGGA...CATTGTCAGCTTTGGTTTTGGAATTGAATGTGCAGACTGCTCACCAGCCCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCCTGGAAACTTCCGATaGCTGCCAGCCAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: QLTQLILTQSSRRECIRIPGNFR*LPANCS
Trigger: GGAGCAGTTGGCTGGCAGTCATCGGAAGTTTCCAGG...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp AGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGACAACCCAATTTTTATaGCCTGGTACTTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: RMDAVLRWGVAQCDLKFWTTQFL*PGTSVP
Trigger: TGGAACAGAAGTACCAGGGCATAAAAATTGGGTTGT...CCAGAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp AGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATCATTGACTGAGGAATaGCCAGGTTTCTCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: RTRMDAVLRWGVAQCDLKSLTEE*PGFSLF
Trigger: AAACAGAGAGAAACCTGGGCATTCCTCAGTCAATGA...TTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp CCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCACAACTGACTAGGTTGTGTCAAATTTaGAGTGACTGTCATTTTGTG +
Preference number: 4 (lower is better)
Translates to: PPTSPSKVLRLYCVSQLTRLCQI*SDCHFV
Trigger: CACAAAATGACAGTCACTGCAAATTTGACACAACCT...AGTCAGTTGTGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp GGCTCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGCTTCCGATTTTTGTTTaGTGTAAGTATTCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: GSNDPPTSPSKVLRLYCVLPIFV*CKYSRP
Trigger: AGGACGAGAATACTTACAGCAAACAAAAATCGGAAG...CACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp CCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCACAACTGACTATGGTCATGCTTTGTTaGGTCATAATGTACGATATC +
Preference number: 4 (lower is better)
Translates to: PPTSPSKVLRLYCVSQLTMVMLC*VIMYDI
Trigger: GATATCGTACATTATGACCCAACAAAGCATGACCAT...AGTCAGTTGTGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp AGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGTCCGCTTCTGTTATTTaGATGTTAACATACGCAAAG +
Preference number: 4 (lower is better)
Translates to: RMDAVLRWGVAQCDLKFWSASVI*MLTYAK
Trigger: CTTTGCGTATGTTAACATTCAAATAACAGAAGCGGA...CCAGAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp AGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGTTCTTCTCCATTACCTaGTTAGTCCTTAGACCAATA +
Preference number: 4 (lower is better)
Translates to: RMDAVLRWGVAQCDLKFWFFSIT*LVLRPI
Trigger: TATTGGTCTAAGGACTAATCAGGTAATGGAGAAGAA...CCAGAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp TCAAGGGCTGGTGAGCAGTCTGCACATTCAATTCCAAAACCAAAGCTGACAATGAGTCACAGGATGTGTTaGTTTGTTCTTCTCCATTAC +
Preference number: 4 (lower is better)
Translates to: SRAGEQSAHSIPKPKLTMSHRMC*FVLLHY
Trigger: GTAATGGAGAAGAACAAATCAACACATCCTGTGACT...CATTGTCAGCTTTGGTTTTGGAATTGAATGTGCAGACTGCTCACCAGCCCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp TCAAGGGCTGGTGAGCAGTCTGCACATTCAATTCCAAAACCAAAGCTGACAATGATTACTATCAGAAAGTaGGAAACCAGCTGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: SRAGEQSAHSIPKPKLTMITIRK*ETSWAF
Trigger: AAAAGCCCAGCTGGTTTCTCACTTTCTGATAGTAAT...CATTGTCAGCTTTGGTTTTGGAATTGAATGTGCAGACTGCTCACCAGCCCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp TCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCAATTACTATCAGAAAGTaGGAAACCAGCTGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: SNDPPTSPSKVLRLYCVSITIRK*ETSWAF
Trigger: AAAAGCCCAGCTGGTTTCTCACTTTCTGATAGTAAT...TGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp GTGTCACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATAGGACAGCTTTGCTCCTaGGTGGATGTCTCTTCCGTT +
Preference number: 4 (lower is better)
Translates to: VSQLTQLILTQSSRRECIGQLCS*VDVSSV
Trigger: AACGGAAGAGACATCCACTCAGGAGCAAAGCTGTCC...TATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGTGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp TCAAGGGCTGGTGAGCAGTCTGCACATTCAATTCCAAAACCAAAGCTGACAATGTCGGGTTGTTCACATTaGTGTTCAAAACACTTTGCA +
Preference number: 4 (lower is better)
Translates to: SRAGEQSAHSIPKPKLTMSGCSH*CSKHFA
Trigger: TGCAAAGTGTTTTGAACATCAATGTGAACAACCCGA...CATTGTCAGCTTTGGTTTTGGAATTGAATGTGCAGACTGCTCACCAGCCCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp AGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAACAAGAGATTCGAGGTTaGTTAAATTGGTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: RTRMDAVLRWGVAQCDLKQEIRG*LNWSSL
Trigger: AAGAGAGGACCAATTTAAGCAACCTCGAATCTCTTG...TTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp ACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGCTTGCTATGATCTaGTTCTTCAGCAATATCTTC +
Preference number: 4 (lower is better)
Translates to: TRMDAVLRWGVAQCDLKFWLAMI*FFSNIF
Trigger: GAAGATATTGCTGAAGAAGCAGATCATAGCAAGCCA...GAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp CACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATCTCCAGGGCTTGGCTTaGTATGATCTGCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: HSHQGGNVYEFHRNSHQNLQGLA*YDLLLQ
Trigger: CTGAAGAAGCAGATCATAGCAAGCCAAGCCCTGGAG...ATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp TCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCATCTTTTCCAATAAGGTaGGGTTGCCTGTTGTTGATT +
Preference number: 4 (lower is better)
Translates to: SNDPPTSPSKVLRLYCVSSFPIR*GCLLLI
Trigger: AATCAACAACAGGCAACCCCACCTTATTGGAAAAGA...TGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp AGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGGCTCAAATGATCCTCCCAAGTCAGGTGGAAATTTaGGATTTACAAACTTTACTC +
Preference number: 4 (lower is better)
Translates to: RWGVAQCDLKFWAQMILPSQVEI*DLQTLL
Trigger: GAGTAAAGTTTGTAAATCCCAAATTTCCACCTGACT...TGGGAGGATCATTTGAGCCCAGAATTTGAGATCACACTGAGCAACACCCCACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp ACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCAAGTCTTGGGATTCTTaGAGGTTGTGTCAAATTTGC +
Preference number: 4 (lower is better)
Translates to: TRMDAVLRWGVAQCDLKFKSWDS*RLCQIC
Trigger: GCAAATTTGACACAACCTCCAAGAATCCCAAGACTT...GAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp TCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCAAAGTCTTGGGATTCTTaGAGGTTGTGTCAAATTTGC +
Preference number: 4 (lower is better)
Translates to: SNDPPTSPSKVLRLYCVSKSWDS*RLCQIC
Trigger: GCAAATTTGACACAACCTCCAAGAATCCCAAGACTT...TGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp GGCTCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGGAGGACATTACTTTATaGTTCTGGTTCTCAAAAGTA +
Preference number: 4 (lower is better)
Translates to: GSNDPPTSPSKVLRLYCVEDITL*FWFSKV
Trigger: TACTTTTGAGAACCAGAACCATAAAGTAATGTCCTC...CACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp GGCTCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGGTTTTCTTTCATAAATaGCATGGTCATGCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: GSNDPPTSPSKVLRLYCVVFFHK*HGHALL
Trigger: CAACAAAGCATGACCATGCCATTTATGAAAGAAAAC...CACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp CCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCACAACTGACTGTTTTCTTTCATAAATaGCATGGTCATGCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: PPTSPSKVLRLYCVSQLTVFFHK*HGHALL
Trigger: CAACAAAGCATGACCATGCCATTTATGAAAGAAAAC...AGTCAGTTGTGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp CACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATTTCAGACTCATTGACTaGGGAATGCCCAGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: HSHQGGNVYEFHRNSHQNFRLID*GMPRFL
Trigger: GAGAAACCTGGGCATTCCTCAGTCAATGAGTCTGAA...ATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp GTGTCACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATAGACAGCCTATTCCCTTaGAGGCCTGGAATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: VSQLTQLILTQSSRRECIDSLFP*RPGILA
Trigger: AGCCAAAATTCCAGGCCTTCAAGGGAATAGGCTGTC...TATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGTGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp ACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATGGACAGCTTTGCTCCTaGGTGGATGTCTCTTCCGTT +
Preference number: 4 (lower is better)
Translates to: TTDSVNFNTVIKEGMYTNGQLCS*VDVSSV
Trigger: AACGGAAGAGACATCCACTCAGGAGCAAAGCTGTCC...ATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp TCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCAAATATCTTCTTCTTCTaGACTACTGTCTTGGAATCG +
Preference number: 4 (lower is better)
Translates to: SNDPPTSPSKVLRLYCVSNIFFF*TTVLES
Trigger: CGATTCCAAGACAGTAGTTCAGAAGAAGAAGATATT...TGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp TCAAGGGCTGGTGAGCAGTCTGCACATTCAATTCCAAAACCAAAGCTGACAATGAATATCTTCTTCTTCTaGACTACTGTCTTGGAATCG +
Preference number: 4 (lower is better)
Translates to: SRAGEQSAHSIPKPKLTMNIFFF*TTVLES
Trigger: CGATTCCAAGACAGTAGTTCAGAAGAAGAAGATATT...CATTGTCAGCTTTGGTTTTGGAATTGAATGTGCAGACTGCTCACCAGCCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp CACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATATGACCATCCAAATTTaGCAGGGCACTATGCACCAG +
Preference number: 4 (lower is better)
Translates to: HSHQGGNVYEFHRNSHQNMTIQI*QGTMHQ
Trigger: CTGGTGCATAGTGCCCTGGCAAATTTGGATGGTCAT...ATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp AGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGAGTCAGGTGGAAATTTaGGATTTACAAACTTTACTC +
Preference number: 4 (lower is better)
Translates to: RMDAVLRWGVAQCDLKFWSQVEI*DLQTLL
Trigger: GAGTAAAGTTTGTAAATCCCAAATTTCCACCTGACT...CCAGAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp CACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGCGGCCAATCGCTTCTaGTTGTCTTCAGCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: HSHQGGNVYEFHRNSHQNAANRF*LSSACL
Trigger: TAAACAAGCTGAAGACAACCAGAAGCGATTGGCCGC...ATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp AGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAAATGGTCATGCTTTGTTaGGTCATAATGTACGATATC +
Preference number: 4 (lower is better)
Translates to: RTRMDAVLRWGVAQCDLKMVMLC*VIMYDI
Trigger: GATATCGTACATTATGACCCAACAAAGCATGACCAT...TTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp GTGTCACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATATTCAGACTCATTGACTaGGGAATGCCCAGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: VSQLTQLILTQSSRRECIFRLID*GMPRFL
Trigger: GAGAAACCTGGGCATTCCTCAGTCAATGAGTCTGAA...TATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGTGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp CAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAAGACAGCCTATTCCCTTaGAGGCCTGGAATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: QLILTQSSRRECIRIPQKDSLFP*RPGILA
Trigger: AGCCAAAATTCCAGGCCTTCAAGGGAATAGGCTGTC...TTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp ACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCGAAAAGAACTTTTCTTaGTTACAGTCCTTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: TRMDAVLRWGVAQCDLKFEKNFS*LQSFLV
Trigger: AACCAGAAAGGACTGTAAGCAAGAAAAGTTCTTTTC...GAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp AGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATGAATGCACTGTTGTCTaGCATTGTACAGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: SHQGGNVYEFHRNSHQNDECTVV*HCTGHQ
Trigger: CTGGTGACCTGTACAATGGCAGACAACAGTGCATTC...ATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCTCCAGGGCTTGGCTTaGTATGATCTGCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: QLTQLILTQSSRRECIRILQGLA*YDLLLQ
Trigger: CTGAAGAAGCAGATCATAGCAAGCCAAGCCCTGGAG...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp ACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCAGTCAGGTGGAAATTTaGGATTTACAAACTTTACTC +
Preference number: 4 (lower is better)
Translates to: TRMDAVLRWGVAQCDLKFSQVEI*DLQTLL
Trigger: GAGTAAAGTTTGTAAATCCCAAATTTCCACCTGACT...GAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp GTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATACTCACTGTCTTTTCCTaGAAACTTCCGATGACTGCC +
Preference number: 4 (lower is better)
Translates to: VIKEGMYTNSTEIVIRMILTVFS*KLPMTA
Trigger: GGCAGTCATCGGAAGTTTCCAGGAAAAGACAGTGAG...TATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp ACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCGAGGACATTACTTTATaGTTCTGGTTCTCAAAAGTA +
Preference number: 4 (lower is better)
Translates to: TRMDAVLRWGVAQCDLKFEDITL*FWFSKV
Trigger: TACTTTTGAGAACCAGAACCATAAAGTAATGTCCTC...GAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp TCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCAGAGGACATTACTTTATaGTTCTGGTTCTCAAAAGTA +
Preference number: 4 (lower is better)
Translates to: SNDPPTSPSKVLRLYCVSEDITL*FWFSKV
Trigger: TACTTTTGAGAACCAGAACCATAAAGTAATGTCCTC...TGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp GTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATATCTGAGGGTCTTCCCTaGGAGACACCTTTGATGATT +
Preference number: 4 (lower is better)
Translates to: VIKEGMYTNSTEIVIRMISEGLP*ETPLMI
Trigger: AATCATCAAAGGTGTCTCCCAGGGAAGACCCTCAGA...TATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp ACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCGTTTTCTTTCATAAATaGCATGGTCATGCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: TRMDAVLRWGVAQCDLKFVFFHK*HGHALL
Trigger: CAACAAAGCATGACCATGCCATTTATGAAAGAAAAC...GAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp AGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATCCAAATCTGCCGAACTaGTTTTGTAGGTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: SHQGGNVYEFHRNSHQNDPNLPN*FCRSVS
Trigger: TGAGACAGACCTACAAAATCAGTTCGGCAGATTTGG...ATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp CACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATTCTTCTGCACTTTCTTaGCCTTTTGAGGAGGGATAT +
Preference number: 4 (lower is better)
Translates to: HSHQGGNVYEFHRNSHQNSSALS*PFEEGY
Trigger: ATATCCCTCCTCAAAAGGTCAAGAAAGTGCAGAAGA...ATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp CACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATACAAACTTTACTCCATaGCACAGGGCTGATTCTTTG +
Preference number: 4 (lower is better)
Translates to: HSHQGGNVYEFHRNSHQNTNFTP*HRADSL
Trigger: CAAAGAATCAGCCCTGTGTCATGGAGTAAAGTTTGT...ATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp GTGTCACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATATTTTTGTCCTCTGGATaGCCATCCAAATTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: VSQLTQLILTQSSRRECIFLSSG*PSKFAR
Trigger: CCTGGCAAATTTGGATGGTCATCCAGAGGACAAAAA...TATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGTGACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTGTCCTCCTTGGAATCTaGGTCTTCATCATCACTGCT +
Preference number: 4 (lower is better)
Translates to: QLTQLILTQSSRRECIRIVLLGI*VFIITA
Trigger: AGCAGTGATGATGAAGACTCAGATTCCAAGGAGGAC...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTGGGCTTGGCTTGCTATaGTCTGCTTCTTCAGCAATA +
Preference number: 4 (lower is better)
Translates to: QLTQLILTQSSRRECIRIGLGLL*SASSAI
Trigger: TATTGCTGAAGAAGCAGATCATAGCAAGCCAAGCCC...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp CACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATTCATTGACTGAGGAATaGCCAGGTTTCTCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: HSHQGGNVYEFHRNSHQNSLTEE*PGFSLF
Trigger: AAACAGAGAGAAACCTGGGCATTCCTCAGTCAATGA...ATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp ACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATATGACCATCCAAATTTaGCAGGGCACTATGCACCAG +
Preference number: 4 (lower is better)
Translates to: TTDSVNFNTVIKEGMYTNMTIQI*QGTMHQ
Trigger: CTGGTGCATAGTGCCCTGGCAAATTTGGATGGTCAT...ATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTATGACCATCCAAATTTaGCAGGGCACTATGCACCAG +
Preference number: 4 (lower is better)
Translates to: QLTQLILTQSSRRECIRIMTIQI*QGTMHQ
Trigger: CTGGTGCATAGTGCCCTGGCAAATTTGGATGGTCAT...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp AGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATAGTCTTCATCATCACTaGTGTCAAACAGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SHQGGNVYEFHRNSHQNDSLHHH*CQTASQ
Trigger: CTGGGAAGCTGTTTGACAGCAGTGATGATGAAGACT...ATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp CAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAACTCACTGTCTTTTCCTaGAAACTTCCGATGACTGCC +
Preference number: 4 (lower is better)
Translates to: QLILTQSSRRECIRIPQKLTVFS*KLPMTA
Trigger: GGCAGTCATCGGAAGTTTCCAGGAAAAGACAGTGAG...TTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp ACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATCTCACTGTCTTTTCCTaGAAACTTCCGATGACTGCC +
Preference number: 4 (lower is better)
Translates to: TTDSVNFNTVIKEGMYTNLTVFS*KLPMTA
Trigger: GGCAGTCATCGGAAGTTTCCAGGAAAAGACAGTGAG...ATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp ACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCTGAGGGTCTTCCCTaGGAGACACCTTTGATGATT +
Preference number: 4 (lower is better)
Translates to: TTDSVNFNTVIKEGMYTNSEGLP*ETPLMI
Trigger: AATCATCAAAGGTGTCTCCCAGGGAAGACCCTCAGA...ATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp AGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATTCCATGACACAGGGCTaGTTCTTTGTTGCTGTTAAT +
Preference number: 4 (lower is better)
Translates to: SHQGGNVYEFHRNSHQNDSMTQG*FFVAVN
Trigger: ATTAACAGCAACAAAGAATCAGCCCTGTGTCATGGA...ATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp GTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATATCCATGACACAGGGCTaGTTCTTTGTTGCTGTTAAT +
Preference number: 4 (lower is better)
Translates to: VIKEGMYTNSTEIVIRMISMTQG*FFVAVN
Trigger: ATTAACAGCAACAAAGAATCAGCCCTGTGTCATGGA...TATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp GTGTCACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATAACAAACTTTACTCCATaGCACAGGGCTGATTCTTTG +
Preference number: 4 (lower is better)
Translates to: VSQLTQLILTQSSRRECITNFTP*HRADSL
Trigger: CAAAGAATCAGCCCTGTGTCATGGAGTAAAGTTTGT...TATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGTGACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp CAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATTTTTGTCCTCTGGATaGCCATCCAAATTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: QLILTQSSRRECIRIPQKFLSSG*PSKFAR
Trigger: CCTGGCAAATTTGGATGGTCATCCAGAGGACAAAAA...TTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTTTTTTGTCCTCTGGATaGCCATCCAAATTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: QLTQLILTQSSRRECIRIFLSSG*PSKFAR
Trigger: CCTGGCAAATTTGGATGGTCATCCAGAGGACAAAAA...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp CACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATTCGGGTTGTTCACATTaGTGTTCAAAACACTTTGCA +
Preference number: 4 (lower is better)
Translates to: HSHQGGNVYEFHRNSHQNSGCSH*CSKHFA
Trigger: TGCAAAGTGTTTTGAACATCAATGTGAACAACCCGA...ATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp GTGTCACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATAATTTCTCTGTTGCCTTaGATGGATGTTGGGCATCTA +
Preference number: 4 (lower is better)
Translates to: VSQLTQLILTQSSRRECIISLLP*MDVGHL
Trigger: TAGATGCCCAACATCCATGCAAGGCAACAGAGAAAT...TATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGTGACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021824.8
ENSMUST00000222197.2
CDS-3UTR GCA 90 bp AGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATCTGTTGGCACTAAGATaGAGGGATGTTTTAGCTTTC +
Preference number: 4 (lower is better)
Translates to: SHQGGNVYEFHRNSHQNDLLALR*RDVLAF
Trigger: GAAAGCTAAAACATCCCTGCATCTTAGTGCCAACAG...ATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCTCTGTTGCCTTGCATaGATGTTGGGCATCTATCAA +
Preference number: 4 (lower is better)
Translates to: QLTQLILTQSSRRECIRILCCLA*MLGIYQ
Trigger: TTGATAGATGCCCAACATCCATGCAAGGCAACAGAG...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021824.8
ENSMUST00000222197.2
CDS-3UTR CCA 90 bp AGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATGCCACTGGAGTCAGGTaGAAATTTGGGATTTACAAA +
Preference number: 4 (lower is better)
Translates to: SHQGGNVYEFHRNSHQNDATGVR*KFGIYK
Trigger: TTTGTAAATCCCAAATTTCCACCTGACTCCAGTGGC...ATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp GTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATAGCCACTGGAGTCAGGTaGAAATTTGGGATTTACAAA +
Preference number: 4 (lower is better)
Translates to: VIKEGMYTNSTEIVIRMIATGVR*KFGIYK
Trigger: TTTGTAAATCCCAAATTTCCACCTGACTCCAGTGGC...TATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp GTGTCACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATAACCTTCTTTGCAGGTTaGCATGAAGTCAGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: VSQLTQLILTQSSRRECITFFAG*HEVSLL
Trigger: AAGCAAACTGACTTCATGCCAACCTGCAAAGAAGGT...TATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGTGACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp GTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATAACCTTCTTTGCAGGTTaGCATGAAGTCAGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: VIKEGMYTNSTEIVIRMITFFAG*HEVSLL
Trigger: AAGCAAACTGACTTCATGCCAACCTGCAAAGAAGGT...TATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTTCTTCTGCACTTTCTTaGCCTTTTGAGGAGGGATAT +
Preference number: 4 (lower is better)
Translates to: QLTQLILTQSSRRECIRISSALS*PFEEGY
Trigger: ATATCCCTCCTCAAAAGGTCAAGAAAGTGCAGAAGA...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp CACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATTTCTTCTCCATTACCTaGTTAGTCCTTAGACCAATA +
Preference number: 4 (lower is better)
Translates to: HSHQGGNVYEFHRNSHQNFFSIT*LVLRPI
Trigger: TATTGGTCTAAGGACTAATCAGGTAATGGAGAAGAA...ATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp GTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATAAGTCACAGGATGTGTTaGTTTGTTCTTCTCCATTAC +
Preference number: 4 (lower is better)
Translates to: VIKEGMYTNSTEIVIRMISHRMC*FVLLHY
Trigger: GTAATGGAGAAGAACAAATCAACACATCCTGTGACT...TATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp GTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATAAGTCCTTTCTGGTTGTaGAGATTCTGCACTGTTTTT +
Preference number: 4 (lower is better)
Translates to: VIKEGMYTNSTEIVIRMISPFWL*RFCTVF
Trigger: AAAAACAGTGCAGAATCTTCACAACCAGAAAGGACT...TATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp AGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATCAAAGTTTTGTCTACTaGCTCCTTTGCATAGAGACA +
Preference number: 4 (lower is better)
Translates to: SHQGGNVYEFHRNSHQNDQSFVY*LLCIET
Trigger: TGTCTCTATGCAAAGGAGTCAGTAGACAAAACTTTG...ATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp AGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATTCGGGTTGTTCACATTaGTGTTCAAAACACTTTGCA +
Preference number: 4 (lower is better)
Translates to: SHQGGNVYEFHRNSHQNDSGCSH*CSKHFA
Trigger: TGCAAAGTGTTTTGAACATCAATGTGAACAACCCGA...ATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTGGCATCTATCAAGATTaGTGGAAACGTTTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: QLTQLILTQSSRRECIRIGIYQD*WKRFPE
Trigger: CTCTGGAAAACGTTTCCAGCAATCTTGATAGATGCC...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021824.8
ENSMUST00000222197.2
CDS-3UTR GCA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTATTTCTCTGTTGCCTTaGATGGATGTTGGGCATCTA +
Preference number: 4 (lower is better)
Translates to: QLTQLILTQSSRRECIRIISLLP*MDVGHL
Trigger: TAGATGCCCAACATCCATGCAAGGCAACAGAGAAAT...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021824.8
ENSMUST00000222197.2
CDS-3UTR GCA 90 bp GTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATAACAACCCAATTTTTATaGCCTGGTACTTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: VIKEGMYTNSTEIVIRMITTQFL*PGTSVP
Trigger: TGGAACAGAAGTACCAGGGCATAAAAATTGGGTTGT...TATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp GTGTCACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATAACAACCCAATTTTTATaGCCTGGTACTTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: VSQLTQLILTQSSRRECITTQFL*PGTSVP
Trigger: TGGAACAGAAGTACCAGGGCATAAAAATTGGGTTGT...TATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGTGACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTTCATTGACTGAGGAATaGCCAGGTTTCTCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: QLTQLILTQSSRRECIRISLTEE*PGFSLF
Trigger: AAACAGAGAGAAACCTGGGCATTCCTCAGTCAATGA...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp CACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATAGGTTGTGTCAAATTTaGAGTGACTGTCATTTTGTG +
Preference number: 4 (lower is better)
Translates to: HSHQGGNVYEFHRNSHQNRLCQI*SDCHFV
Trigger: CACAAAATGACAGTCACTGCAAATTTGACACAACCT...ATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp CAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAAGCGTCTTCTCTTTCTTaGGCCAATCTGTGTAAAAAG +
Preference number: 4 (lower is better)
Translates to: QLILTQSSRRECIRIPQKASSLS*ANLCKK
Trigger: CTTTTTACACAGATTGGCCCAAGAAAGAGAAGACGC...TTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp ACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATGCGTCTTCTCTTTCTTaGGCCAATCTGTGTAAAAAG +
Preference number: 4 (lower is better)
Translates to: TTDSVNFNTVIKEGMYTNASSLS*ANLCKK
Trigger: CTTTTTACACAGATTGGCCCAAGAAAGAGAAGACGC...ATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp GTGTCACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATATCTTTTCCAATAAGGTaGGGTTGCCTGTTGTTGATT +
Preference number: 4 (lower is better)
Translates to: VSQLTQLILTQSSRRECISFPIR*GCLLLI
Trigger: AATCAACAACAGGCAACCCCACCTTATTGGAAAAGA...TATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGTGACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTGCCACTGGAGTCAGGTaGAAATTTGGGATTTACAAA +
Preference number: 4 (lower is better)
Translates to: QLTQLILTQSSRRECIRIATGVR*KFGIYK
Trigger: TTTGTAAATCCCAAATTTCCACCTGACTCCAGTGGC...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp ACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATGCCACTGGAGTCAGGTaGAAATTTGGGATTTACAAA +
Preference number: 4 (lower is better)
Translates to: TTDSVNFNTVIKEGMYTNATGVR*KFGIYK
Trigger: TTTGTAAATCCCAAATTTCCACCTGACTCCAGTGGC...ATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp ACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATACCTTCTTTGCAGGTTaGCATGAAGTCAGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: TTDSVNFNTVIKEGMYTNTFFAG*HEVSLL
Trigger: AAGCAAACTGACTTCATGCCAACCTGCAAAGAAGGT...ATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp GTGTCACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAGGTTGCTTAAATTaGTCCTCTCTTTCTCTAAAG +
Preference number: 4 (lower is better)
Translates to: VSQLTQLILTQSSRRECIRGCLN*SSLSLK
Trigger: CTTTAGAGAAAGAGAGGACCAATTTAAGCAACCTCG...TATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGTGACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp AGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATCGAGGTTGCTTAAATTaGTCCTCTCTTTCTCTAAAG +
Preference number: 4 (lower is better)
Translates to: SHQGGNVYEFHRNSHQNDRGCLN*SSLSLK
Trigger: CTTTAGAGAAAGAGAGGACCAATTTAAGCAACCTCG...ATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp GTGTCACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATATCCGCTTCTGTTATTTaGATGTTAACATACGCAAAG +
Preference number: 4 (lower is better)
Translates to: VSQLTQLILTQSSRRECISASVI*MLTYAK
Trigger: CTTTGCGTATGTTAACATTCAAATAACAGAAGCGGA...TATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGTGACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp GTGTCACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATATTCTTCTCCATTACCTaGTTAGTCCTTAGACCAATA +
Preference number: 4 (lower is better)
Translates to: VSQLTQLILTQSSRRECIFFSIT*LVLRPI
Trigger: TATTGGTCTAAGGACTAATCAGGTAATGGAGAAGAA...TATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGTGACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp ACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATAGTCCTTTCTGGTTGTaGAGATTCTGCACTGTTTTT +
Preference number: 4 (lower is better)
Translates to: TTDSVNFNTVIKEGMYTNSPFWL*RFCTVF
Trigger: AAAAACAGTGCAGAATCTTCACAACCAGAAAGGACT...ATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp ACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATCAAAGTTTTGTCTACTaGCTCCTTTGCATAGAGACA +
Preference number: 4 (lower is better)
Translates to: TTDSVNFNTVIKEGMYTNQSFVY*LLCIET
Trigger: TGTCTCTATGCAAAGGAGTCAGTAGACAAAACTTTG...ATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp CAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAACAAAGTTTTGTCTACTaGCTCCTTTGCATAGAGACA +
Preference number: 4 (lower is better)
Translates to: QLILTQSSRRECIRIPQKQSFVY*LLCIET
Trigger: TGTCTCTATGCAAAGGAGTCAGTAGACAAAACTTTG...TTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp CAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAAATTACTATCAGAAAGTaGGAAACCAGCTGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: QLILTQSSRRECIRIPQKITIRK*ETSWAF
Trigger: AAAAGCCCAGCTGGTTTCTCACTTTCTGATAGTAAT...TTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTTCGGGTTGTTCACATTaGTGTTCAAAACACTTTGCA +
Preference number: 4 (lower is better)
Translates to: QLTQLILTQSSRRECIRISGCSH*CSKHFA
Trigger: TGCAAAGTGTTTTGAACATCAATGTGAACAACCCGA...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp GTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATAAGGTTGTGTCAAATTTaGAGTGACTGTCATTTTGTG +
Preference number: 4 (lower is better)
Translates to: VIKEGMYTNSTEIVIRMIRLCQI*SDCHFV
Trigger: CACAAAATGACAGTCACTGCAAATTTGACACAACCT...TATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp AGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATCTTCCGATTTTTGTTTaGTGTAAGTATTCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: SHQGGNVYEFHRNSHQNDLPIFV*CKYSRP
Trigger: AGGACGAGAATACTTACAGCAAACAAAAATCGGAAG...ATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp ACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATCAAGAGATTCGAGGTTaGTTAAATTGGTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: TTDSVNFNTVIKEGMYTNQEIRG*LNWSSL
Trigger: AAGAGAGGACCAATTTAAGCAACCTCGAATCTCTTG...ATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTTGGCTTGCTATGATCTaGTTCTTCAGCAATATCTTC +
Preference number: 4 (lower is better)
Translates to: QLTQLILTQSSRRECIRIWLAMI*FFSNIF
Trigger: GAAGATATTGCTGAAGAAGCAGATCATAGCAAGCCA...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp ACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCTTTTCCAATAAGGTaGGGTTGCCTGTTGTTGATT +
Preference number: 4 (lower is better)
Translates to: TTDSVNFNTVIKEGMYTNSFPIR*GCLLLI
Trigger: AATCAACAACAGGCAACCCCACCTTATTGGAAAAGA...ATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp CAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAAAAGTCTTGGGATTCTTaGAGGTTGTGTCAAATTTGC +
Preference number: 4 (lower is better)
Translates to: QLILTQSSRRECIRIPQKKSWDS*RLCQIC
Trigger: GCAAATTTGACACAACCTCCAAGAATCCCAAGACTT...TTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp CAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAACGAGGTTGCTTAAATTaGTCCTCTCTTTCTCTAAAG +
Preference number: 4 (lower is better)
Translates to: QLILTQSSRRECIRIPQKRGCLN*SSLSLK
Trigger: CTTTAGAGAAAGAGAGGACCAATTTAAGCAACCTCG...TTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR TCA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTTTCTTCTCCATTACCTaGTTAGTCCTTAGACCAATA +
Preference number: 4 (lower is better)
Translates to: QLTQLILTQSSRRECIRIFFSIT*LVLRPI
Trigger: TATTGGTCTAAGGACTAATCAGGTAATGGAGAAGAA...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp GTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATAGAAAAGAACTTTTCTTaGTTACAGTCCTTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: VIKEGMYTNSTEIVIRMIEKNFS*LQSFLV
Trigger: AACCAGAAAGGACTGTAAGCAAGAAAAGTTCTTTTC...TATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCTTCCGATTTTTGTTTaGTGTAAGTATTCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: QLTQLILTQSSRRECIRILPIFV*CKYSRP
Trigger: AGGACGAGAATACTTACAGCAAACAAAAATCGGAAG...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR GCA 90 bp CAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAACTTCCGATTTTTGTTTaGTGTAAGTATTCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: QLILTQSSRRECIRIPQKLPIFV*CKYSRP
Trigger: AGGACGAGAATACTTACAGCAAACAAAAATCGGAAG...TTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp AGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATAGTCAGGTGGAAATTTaGGATTTACAAACTTTACTC +
Preference number: 4 (lower is better)
Translates to: SHQGGNVYEFHRNSHQNDSQVEI*DLQTLL
Trigger: GAGTAAAGTTTGTAAATCCCAAATTTCCACCTGACT...ATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTATGGTCATGCTTTGTTaGGTCATAATGTACGATATC +
Preference number: 4 (lower is better)
Translates to: QLTQLILTQSSRRECIRIMVMLC*VIMYDI
Trigger: GATATCGTACATTATGACCCAACAAAGCATGACCAT...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp CAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAAATGGTCATGCTTTGTTaGGTCATAATGTACGATATC +
Preference number: 4 (lower is better)
Translates to: QLILTQSSRRECIRIPQKMVMLC*VIMYDI
Trigger: GATATCGTACATTATGACCCAACAAAGCATGACCAT...TTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CCA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTGTTTTCTTTCATAAATaGCATGGTCATGCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: QLTQLILTQSSRRECIRIVFFHK*HGHALL
Trigger: CAACAAAGCATGACCATGCCATTTATGAAAGAAAAC...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGCCTCCTGTCAGGAGTGAAGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTCCGCTTCTCCAGGGCTaGGCTTGCTATGATCTGCTT +
Preference number: 5 (lower is better)
Translates to: SLLSGVKNKNGCCSEVGCPLLQG*ACYDLL
Trigger: AAGCAGATCATAGCAAGCCAAGCCCTGGAGAAGCGG...ACACCCCACCTCAGAACAGCATCCATTCTTGTTCTTCACTCCTGACAGGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGCCTCCTGTCAGGAGTGAAGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTAGGTCACCAGAAGTCTaGGGATTCTTGGAGGTTGTG +
Preference number: 5 (lower is better)
Translates to: SLLSGVKNKNGCCSEVGCRSPEV*GFLEVV
Trigger: CACAACCTCCAAGAATCCCAAGACTTCTGGTGACCT...ACACCCCACCTCAGAACAGCATCCATTCTTGTTCTTCACTCCTGACAGGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGCCTCCTGTCAGGAGTGAAGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTGATGACCATCCAAATTaGCCAGGGCACTATGCACCA +
Preference number: 5 (lower is better)
Translates to: SLLSGVKNKNGCCSEVGCDDHPN*PGHYAP
Trigger: TGGTGCATAGTGCCCTGGCAAATTTGGATGGTCATC...ACACCCCACCTCAGAACAGCATCCATTCTTGTTCTTCACTCCTGACAGGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGCCTCCTGTCAGGAGTGAAGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTCTTTTCTGGACAGCTTaGCTCCTGAGTGGATGTCTC +
Preference number: 5 (lower is better)
Translates to: SLLSGVKNKNGCCSEVGCLFWTA*LLSGCL
Trigger: GAGACATCCACTCAGGAGCAAAGCTGTCCAGAAAAG...ACACCCCACCTCAGAACAGCATCCATTCTTGTTCTTCACTCCTGACAGGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS GCA 90 bp TGCCCTGTCCAAGTCCACCCACAAAGAGGCGCTTCATTTCTCTGTTaGCTTGCATGGATGTTGGGCATCTATCAAGATTGCTGGAAACGT +
Preference number: 5 (lower is better)
Translates to: CPVQVHPQRGASFLC*LAWMLGIYQDCWKR
Trigger: ACGTTTCCAGCAATCTTGATAGATGCCCAACATCCATGCAAGGCAACAGAGAAATGAAGCGCCTCTTTGTGGGTGGACTTGGACAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000222197.2
ENSMUST00000222333.2
CDS-3UTR CAA 90 bp AGCCTCCTGTCAGGAGTGAAGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTCATGTTCAGACTCATaGACTGAGGAATGCCCAGGT +
Preference number: 5 (lower is better)
Translates to: SLLSGVKNKNGCCSEVGCSCSDS*TEECPG
Trigger: ACCTGGGCATTCCTCAGTCAATGAGTCTGAACATGA...ACACCCCACCTCAGAACAGCATCCATTCTTGTTCTTCACTCCTGACAGGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp GGCTCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGAGGTCACCAGAAGTCTaGGGATTCTTGGAGGTTGTG +
Preference number: 5 (lower is better)
Translates to: GSNDPPTSPSKVLRLYCVRSPEV*GFLEVV
Trigger: CACAACCTCCAAGAATCCCAAGACTTCTGGTGACCT...CACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGGCTCAAATGATCCTCCCACACTGTTGTCTGCCATaGTACAGGTCACCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: RWGVAQCDLKFWAQMILPHCCLP*YRSPEV
Trigger: GACTTCTGGTGACCTGTACAATGGCAGACAACAGTG...TGGGAGGATCATTTGAGCCCAGAATTTGAGATCACACTGAGCAACACCCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp GGCTCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGCACTGTTGTCTGCCATaGTACAGGTCACCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: GSNDPPTSPSKVLRLYCVHCCLP*YRSPEV
Trigger: GACTTCTGGTGACCTGTACAATGGCAGACAACAGTG...CACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCACAACTGACTCTTTTCTGGACAGCTTaGCTCCTGAGTGGATGTCTC +
Preference number: 5 (lower is better)
Translates to: PPTSPSKVLRLYCVSQLTLFWTA*LLSGCL
Trigger: GAGACATCCACTCAGGAGCAAAGCTGTCCAGAAAAG...AGTCAGTTGTGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp ACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCCCGCTTCTCCAGGGCTaGGCTTGCTATGATCTGCTT +
Preference number: 5 (lower is better)
Translates to: TRMDAVLRWGVAQCDLKFPLLQG*ACYDLL
Trigger: AAGCAGATCATAGCAAGCCAAGCCCTGGAGAAGCGG...GAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGGCTCAAATGATCCTCCCATCATGTTCAGACTCATaGACTGAGGAATGCCCAGGT +
Preference number: 5 (lower is better)
Translates to: RWGVAQCDLKFWAQMILPSCSDS*TEECPG
Trigger: ACCTGGGCATTCCTCAGTCAATGAGTCTGAACATGA...TGGGAGGATCATTTGAGCCCAGAATTTGAGATCACACTGAGCAACACCCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp GGCTCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGAGGAAGAATGCACTGTaGTCTGCCATTGTACAGGTC +
Preference number: 5 (lower is better)
Translates to: GSNDPPTSPSKVLRLYCVRKNAL*SAIVQV
Trigger: GACCTGTACAATGGCAGACAACAGTGCATTCTTCCT...CACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGGCTCAAATGATCCTCCCAAGGAAGAATGCACTGTaGTCTGCCATTGTACAGGTC +
Preference number: 5 (lower is better)
Translates to: RWGVAQCDLKFWAQMILPRKNAL*SAIVQV
Trigger: GACCTGTACAATGGCAGACAACAGTGCATTCTTCCT...TGGGAGGATCATTTGAGCCCAGAATTTGAGATCACACTGAGCAACACCCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGCCTCCTGTCAGGAGTGAAGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGTCTACTGACTCCTTaGCATAGAGACAGCCTATTC +
Preference number: 5 (lower is better)
Translates to: SLLSGVKNKNGCCSEVGCCLLTP*HRDSLF
Trigger: GAATAGGCTGTCTCTATGCAAAGGAGTCAGTAGACA...ACACCCCACCTCAGAACAGCATCCATTCTTGTTCTTCACTCCTGACAGGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp GGCTCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGGGTCATTCACCTTCTTaGCAGGTTGGCATGAAGTCA +
Preference number: 5 (lower is better)
Translates to: GSNDPPTSPSKVLRLYCVGHSPS*QVGMKS
Trigger: TGACTTCATGCCAACCTGCAAAGAAGGTGAATGACC...CACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS CCA 90 bp CAAGTCCACCCACAAAGAGGCGCTTCATTTCTCTGTTGCCTTGCATaGATGTTGGGCATCTATCAAGATTGCTGGAAACGTTTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: QVHPQRGASFLCCLA*MLGIYQDCWKRFPE
Trigger: CTCTGGAAAACGTTTCCAGCAATCTTGATAGATGCCCAACATCCATGCAAGGCAACAGAGAAATGAAGCGCCTCTTTGTGGGTGGACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000222197.2
ENSMUST00000222333.2
CDS-3UTR CAA 90 bp ACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCAGGTCACCAGAAGTCTaGGGATTCTTGGAGGTTGTG +
Preference number: 5 (lower is better)
Translates to: TRMDAVLRWGVAQCDLKFRSPEV*GFLEVV
Trigger: CACAACCTCCAAGAATCCCAAGACTTCTGGTGACCT...GAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp TCAAGGGCTGGTGAGCAGTCTGCACATTCAATTCCAAAACCAAAGCTGACAATGAGGTCACCAGAAGTCTaGGGATTCTTGGAGGTTGTG +
Preference number: 5 (lower is better)
Translates to: SRAGEQSAHSIPKPKLTMRSPEV*GFLEVV
Trigger: CACAACCTCCAAGAATCCCAAGACTTCTGGTGACCT...CATTGTCAGCTTTGGTTTTGGAATTGAATGTGCAGACTGCTCACCAGCCCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp TCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCACTTTTCTGGACAGCTTaGCTCCTGAGTGGATGTCTC +
Preference number: 5 (lower is better)
Translates to: SNDPPTSPSKVLRLYCVSLFWTA*LLSGCL
Trigger: GAGACATCCACTCAGGAGCAAAGCTGTCCAGAAAAG...TGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAACTTTTCTGGACAGCTTaGCTCCTGAGTGGATGTCTC +
Preference number: 5 (lower is better)
Translates to: RTRMDAVLRWGVAQCDLKLFWTA*LLSGCL
Trigger: GAGACATCCACTCAGGAGCAAAGCTGTCCAGAAAAG...TTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGCCTCCTGTCAGGAGTGAAGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTCCTTTGTTCGTCGGGTaGTTCACATTGATGTTCAAA +
Preference number: 5 (lower is better)
Translates to: SLLSGVKNKNGCCSEVGCPLFVG*FTLMFK
Trigger: TTTGAACATCAATGTGAACAACCCGACGAACAAAGG...ACACCCCACCTCAGAACAGCATCCATTCTTGTTCTTCACTCCTGACAGGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGGCTCAAATGATCCTCCCATGGCATGGTCATGCTTaGTTGGGTCATAATGTACGA +
Preference number: 5 (lower is better)
Translates to: RWGVAQCDLKFWAQMILPWHGHA*LGHNVR
Trigger: TCGTACATTATGACCCAACAAAGCATGACCATGCCA...TGGGAGGATCATTTGAGCCCAGAATTTGAGATCACACTGAGCAACACCCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp ACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGCCTTGCATGGATGTaGGGCATCTATCAAGATTGC +
Preference number: 5 (lower is better)
Translates to: TRMDAVLRWGVAQCDLKFCLAWM*GIYQDC
Trigger: GCAATCTTGATAGATGCCCAACATCCATGCAAGGCA...GAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021824.8
CDS-3UTR CAA 90 bp TCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCATGCCTTGCATGGATGTaGGGCATCTATCAAGATTGC +
Preference number: 5 (lower is better)
Translates to: SNDPPTSPSKVLRLYCVSCLAWM*GIYQDC
Trigger: GCAATCTTGATAGATGCCCAACATCCATGCAAGGCA...TGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021824.8
ENSMUST00000222197.2
CDS-3UTR CAA 90 bp AGCCTCCTGTCAGGAGTGAAGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTTTCTTTCTTTGCTTTaGCGTCTTCTCTTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: SLLSGVKNKNGCCSEVGCFLSLL*RLLFLG
Trigger: CCCAAGAAAGAGAAGACGCAAAAGCAAAGAAAGAAA...ACACCCCACCTCAGAACAGCATCCATTCTTGTTCTTCACTCCTGACAGGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGGCTCAAATGATCCTCCCACACTTTCTTGACCTTTaGAGGAGGGATATGAAAGTC +
Preference number: 5 (lower is better)
Translates to: RWGVAQCDLKFWAQMILPHFLDL*RRDMKV
Trigger: GACTTTCATATCCCTCCTCAAAAGGTCAAGAAAGTG...TGGGAGGATCATTTGAGCCCAGAATTTGAGATCACACTGAGCAACACCCCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp ACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCGACTCCATGGGATCATaGCTCTTCTGCACTTTCTTG +
Preference number: 5 (lower is better)
Translates to: TRMDAVLRWGVAQCDLKFDSMGS*LFCTFL
Trigger: CAAGAAAGTGCAGAAGAGCAATGATCCCATGGAGTC...GAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp TCAAGGGCTGGTGAGCAGTCTGCACATTCAATTCCAAAACCAAAGCTGACAATGGACTCCATGGGATCATaGCTCTTCTGCACTTTCTTG +
Preference number: 5 (lower is better)
Translates to: SRAGEQSAHSIPKPKLTMDSMGS*LFCTFL
Trigger: CAAGAAAGTGCAGAAGAGCAATGATCCCATGGAGTC...CATTGTCAGCTTTGGTTTTGGAATTGAATGTGCAGACTGCTCACCAGCCCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp TCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCAGACTCCATGGGATCATaGCTCTTCTGCACTTTCTTG +
Preference number: 5 (lower is better)
Translates to: SNDPPTSPSKVLRLYCVSDSMGS*LFCTFL
Trigger: CAAGAAAGTGCAGAAGAGCAATGATCCCATGGAGTC...TGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp TCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCATCATGTTCAGACTCATaGACTGAGGAATGCCCAGGT +
Preference number: 5 (lower is better)
Translates to: SNDPPTSPSKVLRLYCVSSCSDS*TEECPG
Trigger: ACCTGGGCATTCCTCAGTCAATGAGTCTGAACATGA...TGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGGCTCAAATGATCCTCCCACACAGGGCTGATTCTTaGTTGCTGTTAATTCCTTGT +
Preference number: 5 (lower is better)
Translates to: RWGVAQCDLKFWAQMILPHRADS*LLLIPC
Trigger: ACAAGGAATTAACAGCAACAAAGAATCAGCCCTGTG...TGGGAGGATCATTTGAGCCCAGAATTTGAGATCACACTGAGCAACACCCCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCACAACTGACTCACAGGGCTGATTCTTaGTTGCTGTTAATTCCTTGT +
Preference number: 5 (lower is better)
Translates to: PPTSPSKVLRLYCVSQLTHRADS*LLLIPC
Trigger: ACAAGGAATTAACAGCAACAAAGAATCAGCCCTGTG...AGTCAGTTGTGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGTGGGATTCTTGGAGGTaGTGTCAAATTTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: RMDAVLRWGVAQCDLKFWWDSWR*CQICSD
Trigger: GTCACTGCAAATTTGACACAACCTCCAAGAATCCCA...CCAGAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGGCTCAAATGATCCTCCCAGAAGTCTTGGGATTCTaGGAGGTTGTGTCAAATTTG +
Preference number: 5 (lower is better)
Translates to: RWGVAQCDLKFWAQMILPEVLGF*EVVSNL
Trigger: CAAATTTGACACAACCTCCAAGAATCCCAAGACTTC...TGGGAGGATCATTTGAGCCCAGAATTTGAGATCACACTGAGCAACACCCCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGGCTCAAATGATCCTCCCATGGCATGAAGTCAGTTaGCTTGATGAGCCATTAACA +
Preference number: 5 (lower is better)
Translates to: RWGVAQCDLKFWAQMILPWHEVS*LDEPLT
Trigger: TGTTAATGGCTCATCAAGCAAACTGACTTCATGCCA...TGGGAGGATCATTTGAGCCCAGAATTTGAGATCACACTGAGCAACACCCCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp ACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCGGTCATTCACCTTCTTaGCAGGTTGGCATGAAGTCA +
Preference number: 5 (lower is better)
Translates to: TRMDAVLRWGVAQCDLKFGHSPS*QVGMKS
Trigger: TGACTTCATGCCAACCTGCAAAGAAGGTGAATGACC...GAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGGCTCAAATGATCCTCCCATCAAGAGATTCGAGGTaGCTTAAATTGGTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: RWGVAQCDLKFWAQMILPSRDSR*LKLVLS
Trigger: AGAGAGGACCAATTTAAGCAACCTCGAATCTCTTGA...TGGGAGGATCATTTGAGCCCAGAATTTGAGATCACACTGAGCAACACCCCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCACAACTGACTCAGTCACAGGATGTGTaGATTTGTTCTTCTCCATTA +
Preference number: 5 (lower is better)
Translates to: PPTSPSKVLRLYCVSQLTQSQDV*ICSSPL
Trigger: TAATGGAGAAGAACAAATCAACACATCCTGTGACTG...AGTCAGTTGTGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGGCTCAAATGATCCTCCCAAGGGCTGATTCTTTGTaGCTGTTAATTCCTTGTACT +
Preference number: 5 (lower is better)
Translates to: RWGVAQCDLKFWAQMILPRADSL*LLIPCT
Trigger: AGTACAAGGAATTAACAGCAACAAAGAATCAGCCCT...TGGGAGGATCATTTGAGCCCAGAATTTGAGATCACACTGAGCAACACCCCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGCCTCCTGTCAGGAGTGAAGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTGAGTCAGGTGGAAATTaGGGATTTACAAACTTTACT +
Preference number: 5 (lower is better)
Translates to: SLLSGVKNKNGCCSEVGCESGGN*GFTNFT
Trigger: AGTAAAGTTTGTAAATCCCAAATTTCCACCTGACTC...ACACCCCACCTCAGAACAGCATCCATTCTTGTTCTTCACTCCTGACAGGAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp TCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCAGCAGTGACTGTCATTTaGTGGACCATTAGTCTCACT +
Preference number: 5 (lower is better)
Translates to: SNDPPTSPSKVLRLYCVSAVTVI*WTISLT
Trigger: AGTGAGACTAATGGTCCACAAAATGACAGTCACTGC...TGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp ACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCGCAGTGACTGTCATTTaGTGGACCATTAGTCTCACT +
Preference number: 5 (lower is better)
Translates to: TRMDAVLRWGVAQCDLKFAVTVI*WTISLT
Trigger: AGTGAGACTAATGGTCCACAAAATGACAGTCACTGC...GAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp GGCTCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGCATGGTCATGCTTTGTaGGGTCATAATGTACGATAT +
Preference number: 5 (lower is better)
Translates to: GSNDPPTSPSKVLRLYCVHGHAL*GHNVRY
Trigger: ATATCGTACATTATGACCCAACAAAGCATGACCATG...CACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCACAACTGACTCATGGTCATGCTTTGTaGGGTCATAATGTACGATAT +
Preference number: 5 (lower is better)
Translates to: PPTSPSKVLRLYCVSQLTHGHAL*GHNVRY
Trigger: ATATCGTACATTATGACCCAACAAAGCATGACCATG...AGTCAGTTGTGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATGGCATGGTCATGCTTaGTTGGGTCATAATGTACGA +
Preference number: 5 (lower is better)
Translates to: RTRMDAVLRWGVAQCDLKWHGHA*LGHNVR
Trigger: TCGTACATTATGACCCAACAAAGCATGACCATGCCA...TTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGGTTATAATACATGTCTaGGGATACCTCAGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: RMDAVLRWGVAQCDLKFWVIIHV*GYLRQL
Trigger: AAGCTGCCTGAGGTATCCCAAGACATGTATTATAAC...CCAGAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp TCAAGGGCTGGTGAGCAGTCTGCACATTCAATTCCAAAACCAAAGCTGACAATGCACTTTCTTGACCTTTaGAGGAGGGATATGAAAGTC +
Preference number: 5 (lower is better)
Translates to: SRAGEQSAHSIPKPKLTMHFLDL*RRDMKV
Trigger: GACTTTCATATCCCTCCTCAAAAGGTCAAGAAAGTG...CATTGTCAGCTTTGGTTTTGGAATTGAATGTGCAGACTGCTCACCAGCCCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp TCAAGGGCTGGTGAGCAGTCTGCACATTCAATTCCAAAACCAAAGCTGACAATGCCAATATTAGAAACCTaGGACTCCATGGGATCATTG +
Preference number: 5 (lower is better)
Translates to: SRAGEQSAHSIPKPKLTMPILET*DSMGSL
Trigger: CAATGATCCCATGGAGTCCAAGGTTTCTAATATTGG...CATTGTCAGCTTTGGTTTTGGAATTGAATGTGCAGACTGCTCACCAGCCCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGACTGGACACAAGGAGTaGTTTAGAAGGATTAACAGT +
Preference number: 5 (lower is better)
Translates to: RMDAVLRWGVAQCDLKFWTGHKE*FRRINS
Trigger: ACTGTTAATCCTTCTAAACAACTCCTTGTGTCCAGT...CCAGAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAACACAGGGCTGATTCTTaGTTGCTGTTAATTCCTTGT +
Preference number: 5 (lower is better)
Translates to: RTRMDAVLRWGVAQCDLKHRADS*LLLIPC
Trigger: ACAAGGAATTAACAGCAACAAAGAATCAGCCCTGTG...TTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp ACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCCACAGGGCTGATTCTTaGTTGCTGTTAATTCCTTGT +
Preference number: 5 (lower is better)
Translates to: TRMDAVLRWGVAQCDLKFHRADS*LLLIPC
Trigger: ACAAGGAATTAACAGCAACAAAGAATCAGCCCTGTG...GAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp GGCTCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGGAGTCAGGTGGAAATTaGGGATTTACAAACTTTACT +
Preference number: 5 (lower is better)
Translates to: GSNDPPTSPSKVLRLYCVESGGN*GFTNFT
Trigger: AGTAAAGTTTGTAAATCCCAAATTTCCACCTGACTC...CACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp ACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCGAAGTCTTGGGATTCTaGGAGGTTGTGTCAAATTTG +
Preference number: 5 (lower is better)
Translates to: TRMDAVLRWGVAQCDLKFEVLGF*EVVSNL
Trigger: CAAATTTGACACAACCTCCAAGAATCCCAAGACTTC...GAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp TCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCAGAAGTCTTGGGATTCTaGGAGGTTGTGTCAAATTTG +
Preference number: 5 (lower is better)
Translates to: SNDPPTSPSKVLRLYCVSEVLGF*EVVSNL
Trigger: CAAATTTGACACAACCTCCAAGAATCCCAAGACTTC...TGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCACAACTGACTTTCTCTTTCAAAGTTTaGTCTACTGACTCCTTTGCA +
Preference number: 5 (lower is better)
Translates to: PPTSPSKVLRLYCVSQLTFSFKV*STDSFA
Trigger: TGCAAAGGAGTCAGTAGACAAAACTTTGAAAGAGAA...AGTCAGTTGTGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp TCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCATGGCATGAAGTCAGTTaGCTTGATGAGCCATTAACA +
Preference number: 5 (lower is better)
Translates to: SNDPPTSPSKVLRLYCVSWHEVS*LDEPLT
Trigger: TGTTAATGGCTCATCAAGCAAACTGACTTCATGCCA...TGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp TCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCATCAAGAGATTCGAGGTaGCTTAAATTGGTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: SNDPPTSPSKVLRLYCVSSRDSR*LKLVLS
Trigger: AGAGAGGACCAATTTAAGCAACCTCGAATCTCTTGA...TGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGAACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAAGTTATAATACATGTCTaGGGATACCTCAGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: RTRMDAVLRWGVAQCDLKVIIHV*GYLRQL
Trigger: AAGCTGCCTGAGGTATCCCAAGACATGTATTATAAC...TTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp TCAAGGGCTGGTGAGCAGTCTGCACATTCAATTCCAAAACCAAAGCTGACAATGGTTATAATACATGTCTaGGGATACCTCAGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: SRAGEQSAHSIPKPKLTMVIIHV*GYLRQL
Trigger: AAGCTGCCTGAGGTATCCCAAGACATGTATTATAAC...CATTGTCAGCTTTGGTTTTGGAATTGAATGTGCAGACTGCTCACCAGCCCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATCCGCTTCTCCAGGGCTaGGCTTGCTATGATCTGCTT +
Preference number: 5 (lower is better)
Translates to: SHQGGNVYEFHRNSHQNDPLLQG*ACYDLL
Trigger: AAGCAGATCATAGCAAGCCAAGCCCTGGAGAAGCGG...ATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp GTGTCACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACCGCTTCTCCAGGGCTaGGCTTGCTATGATCTGCTT +
Preference number: 5 (lower is better)
Translates to: VSQLTQLILTQSSRRECIPLLQG*ACYDLL
Trigger: AAGCAGATCATAGCAAGCCAAGCCCTGGAGAAGCGG...TATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGTGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS TCA 90 bp TCACCAGAAGTCTTGGGATTCTTGGAGGTTGTGTCAAATTTGCAGTaGCTGTCATTTTGTGGACCATTAGTCTCACTGTCTTTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: SPEVLGFLEVVSNLQ*LSFCGPLVSLSFPG
Trigger: TCCAGGAAAAGACAGTGAGACTAATGGTCCACAAAATGACAGTCACTGCAAATTTGACACAACCTCCAAGAATCCCAAGACTTCTGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS TCA 90 bp TTGTTTATCCTTAGCATTTATACAGGATGCATTACTATCAGAAAGTaGGAAACCAGCTGGGCTTTTCTGAGGGTCTTCCCTGGGAGACAC +
Preference number: 5 (lower is better)
Translates to: LFILSIYTGCITIRK*ETSWAFLRVFPGRH
Trigger: GTGTCTCCCAGGGAAGACCCTCAGAAAAGCCCAGCTGGTTTCTCACTTTCTGATAGTAATGCATCCTGTATAAATGCTAAGGATAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS CCA 90 bp GAAGAATGCACTGTTGTCTGCCATTGTACAGGTCACCAGAAGTCTTaGGATTCTTGGAGGTTGTGTCAAATTTGCAGTGACTGTCATTTT +
Preference number: 5 (lower is better)
Translates to: EECTVVCHCTGHQKS*DSWRLCQICSDCHF
Trigger: AAAATGACAGTCACTGCAAATTTGACACAACCTCCAAGAATCCCAAGACTTCTGGTGACCTGTACAATGGCAGACAACAGTGCATTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp TCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCATTTCTTTCTTTGCTTTaGCGTCTTCTCTTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: SNDPPTSPSKVLRLYCVSFLSLL*RLLFLG
Trigger: CCCAAGAAAGAGAAGACGCAAAAGCAAAGAAAGAAA...TGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp ACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCACTGGACACAAGGAGTaGTTTAGAAGGATTAACAGT +
Preference number: 5 (lower is better)
Translates to: TRMDAVLRWGVAQCDLKFTGHKE*FRRINS
Trigger: ACTGTTAATCCTTCTAAACAACTCCTTGTGTCCAGT...GAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp ACAAGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCAGGGCTGATTCTTTGTaGCTGTTAATTCCTTGTACT +
Preference number: 5 (lower is better)
Translates to: TRMDAVLRWGVAQCDLKFRADSL*LLIPCT
Trigger: AGTACAAGGAATTAACAGCAACAAAGAATCAGCCCT...GAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp TCAAATGATCCTCCCACTTCCCCTTCTAAAGTGCTGAGGCTATACTGTGTGTCAAGGGCTGATTCTTTGTaGCTGTTAATTCCTTGTACT +
Preference number: 5 (lower is better)
Translates to: SNDPPTSPSKVLRLYCVSRADSL*LLIPCT
Trigger: AGTACAAGGAATTAACAGCAACAAAGAATCAGCCCT...TGACACACAGTATAGCCTCAGCACTTTAGAAGGGGAAGTGGGAGGATCATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGAATGGATGCTGTTCTGAGGTGGGGTGTTGCTCAGTGTGATCTCAAATTCTGGGAGTCAGGTGGAAATTaGGGATTTACAAACTTTACT +
Preference number: 5 (lower is better)
Translates to: RMDAVLRWGVAQCDLKFWESGGN*GFTNFT
Trigger: AGTAAAGTTTGTAAATCCCAAATTTCCACCTGACTC...CCAGAATTTGAGATCACACTGAGCAACACCCCACCTCAGAACAGCATCCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATCACTGTTGTCTGCCATaGTACAGGTCACCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: HSHQGGNVYEFHRNSHQNHCCLP*YRSPEV
Trigger: GACTTCTGGTGACCTGTACAATGGCAGACAACAGTG...ATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp TCAAGGGCTGGTGAGCAGTCTGCACATTCAATTCCAAAACCAAAGCTGACAATGCATGGTCATGCTTTGTaGGGTCATAATGTACGATAT +
Preference number: 5 (lower is better)
Translates to: SRAGEQSAHSIPKPKLTMHGHAL*GHNVRY
Trigger: ATATCGTACATTATGACCCAACAAAGCATGACCATG...CATTGTCAGCTTTGGTTTTGGAATTGAATGTGCAGACTGCTCACCAGCCCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp TCAAGGGCTGGTGAGCAGTCTGCACATTCAATTCCAAAACCAAAGCTGACAATGGAGTCAGGTGGAAATTaGGGATTTACAAACTTTACT +
Preference number: 5 (lower is better)
Translates to: SRAGEQSAHSIPKPKLTMESGGN*GFTNFT
Trigger: AGTAAAGTTTGTAAATCCCAAATTTCCACCTGACTC...CATTGTCAGCTTTGGTTTTGGAATTGAATGTGCAGACTGCTCACCAGCCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp GTGTCACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATAGATGACCATCCAAATTaGCCAGGGCACTATGCACCA +
Preference number: 5 (lower is better)
Translates to: VSQLTQLILTQSSRRECIDDHPN*PGHYAP
Trigger: TGGTGCATAGTGCCCTGGCAAATTTGGATGGTCATC...TATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGTGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp GTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATACTGGTGCTGTCCTCCTaGGAATCTGAGTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: VIKEGMYTNSTEIVIRMILVLSS*ESESSS
Trigger: TGATGAAGACTCAGATTCCAAGGAGGACAGCACCAG...TATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATGACTCCATGGGATCATaGCTCTTCTGCACTTTCTTG +
Preference number: 5 (lower is better)
Translates to: SHQGGNVYEFHRNSHQNDDSMGS*LFCTFL
Trigger: CAAGAAAGTGCAGAAGAGCAATGATCCCATGGAGTC...ATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCACTGTTGTCTGCCATaGTACAGGTCACCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: QLTQLILTQSSRRECIRIHCCLP*YRSPEV
Trigger: GACTTCTGGTGACCTGTACAATGGCAGACAACAGTG...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATAGGAAGAATGCACTGTaGTCTGCCATTGTACAGGTC +
Preference number: 5 (lower is better)
Translates to: SHQGGNVYEFHRNSHQNDRKNAL*SAIVQV
Trigger: GACCTGTACAATGGCAGACAACAGTGCATTCTTCCT...ATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATAAGTACACTGTCTTTTaGGAGGCTGAATGTGGTTCG +
Preference number: 5 (lower is better)
Translates to: HSHQGGNVYEFHRNSHQNKYTVF*EAECGS
Trigger: CGAACCACATTCAGCCTCCAAAAAGACAGTGTACTT...ATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTGATGACCATCCAAATTaGCCAGGGCACTATGCACCA +
Preference number: 5 (lower is better)
Translates to: QLTQLILTQSSRRECIRIDDHPN*PGHYAP
Trigger: TGGTGCATAGTGCCCTGGCAAATTTGGATGGTCATC...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCTGGTGCTGTCCTCCTaGGAATCTGAGTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: QLTQLILTQSSRRECIRILVLSS*ESESSS
Trigger: TGATGAAGACTCAGATTCCAAGGAGGACAGCACCAG...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp ACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATCTGGTGCTGTCCTCCTaGGAATCTGAGTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: TTDSVNFNTVIKEGMYTNLVLSS*ESESSS
Trigger: TGATGAAGACTCAGATTCCAAGGAGGACAGCACCAG...ATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATCATGTTCAGACTCATaGACTGAGGAATGCCCAGGT +
Preference number: 5 (lower is better)
Translates to: QLILTQSSRRECIRIPQKSCSDS*TEECPG
Trigger: ACCTGGGCATTCCTCAGTCAATGAGTCTGAACATGA...TTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATGCAGTGACTGTCATTTaGTGGACCATTAGTCTCACT +
Preference number: 5 (lower is better)
Translates to: SHQGGNVYEFHRNSHQNDAVTVI*WTISLT
Trigger: AGTGAGACTAATGGTCCACAAAATGACAGTCACTGC...ATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATTGGGATTCTTGGAGGTaGTGTCAAATTTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: SHQGGNVYEFHRNSHQNDWDSWR*CQICSD
Trigger: GTCACTGCAAATTTGACACAACCTCCAAGAATCCCA...ATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp GTGTCACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATATGGGATTCTTGGAGGTaGTGTCAAATTTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: VSQLTQLILTQSSRRECIWDSWR*CQICSD
Trigger: GTCACTGCAAATTTGACACAACCTCCAAGAATCCCA...TATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGTGACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGAAGTCTTGGGATTCTaGGAGGTTGTGTCAAATTTG +
Preference number: 5 (lower is better)
Translates to: HSHQGGNVYEFHRNSHQNEVLGF*EVVSNL
Trigger: CAAATTTGACACAACCTCCAAGAATCCCAAGACTTC...ATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTAGGAAGAATGCACTGTaGTCTGCCATTGTACAGGTC +
Preference number: 5 (lower is better)
Translates to: QLTQLILTQSSRRECIRIRKNAL*SAIVQV
Trigger: GACCTGTACAATGGCAGACAACAGTGCATTCTTCCT...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp GTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATATGTCTACTGACTCCTTaGCATAGAGACAGCCTATTC +
Preference number: 5 (lower is better)
Translates to: VIKEGMYTNSTEIVIRMICLLTP*HRDSLF
Trigger: GAATAGGCTGTCTCTATGCAAAGGAGTCAGTAGACA...TATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp ACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATGGTCATTCACCTTCTTaGCAGGTTGGCATGAAGTCA +
Preference number: 5 (lower is better)
Translates to: TTDSVNFNTVIKEGMYTNGHSPS*QVGMKS
Trigger: TGACTTCATGCCAACCTGCAAAGAAGGTGAATGACC...ATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAAGGTCATTCACCTTCTTaGCAGGTTGGCATGAAGTCA +
Preference number: 5 (lower is better)
Translates to: QLILTQSSRRECIRIPQKGHSPS*QVGMKS
Trigger: TGACTTCATGCCAACCTGCAAAGAAGGTGAATGACC...TTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATTCAAGAGATTCGAGGTaGCTTAAATTGGTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: HSHQGGNVYEFHRNSHQNSRDSR*LKLVLS
Trigger: AGAGAGGACCAATTTAAGCAACCTCGAATCTCTTGA...ATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp GTGTCACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATATGGCATGGTCATGCTTaGTTGGGTCATAATGTACGA +
Preference number: 5 (lower is better)
Translates to: VSQLTQLILTQSSRRECIWHGHA*LGHNVR
Trigger: TCGTACATTATGACCCAACAAAGCATGACCATGCCA...TATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGTGACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATTTTCTTTCTTTGCTTTaGCGTCTTCTCTTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: HSHQGGNVYEFHRNSHQNFLSLL*RLLFLG
Trigger: CCCAAGAAAGAGAAGACGCAAAAGCAAAGAAAGAAA...ATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp GTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATACACTTTCTTGACCTTTaGAGGAGGGATATGAAAGTC +
Preference number: 5 (lower is better)
Translates to: VIKEGMYTNSTEIVIRMIHFLDL*RRDMKV
Trigger: GACTTTCATATCCCTCCTCAAAAGGTCAAGAAAGTG...TATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp GTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATACCAATATTAGAAACCTaGGACTCCATGGGATCATTG +
Preference number: 5 (lower is better)
Translates to: VIKEGMYTNSTEIVIRMIPILET*DSMGSL
Trigger: CAATGATCCCATGGAGTCCAAGGTTTCTAATATTGG...TATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATCCAATATTAGAAACCTaGGACTCCATGGGATCATTG +
Preference number: 5 (lower is better)
Translates to: SHQGGNVYEFHRNSHQNDPILET*DSMGSL
Trigger: CAATGATCCCATGGAGTCCAAGGTTTCTAATATTGG...ATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAAGCAGTGACTGTCATTTaGTGGACCATTAGTCTCACT +
Preference number: 5 (lower is better)
Translates to: QLILTQSSRRECIRIPQKAVTVI*WTISLT
Trigger: AGTGAGACTAATGGTCCACAAAATGACAGTCACTGC...TTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp ACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTGGGATTCTTGGAGGTaGTGTCAAATTTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: TTDSVNFNTVIKEGMYTNWDSWR*CQICSD
Trigger: GTCACTGCAAATTTGACACAACCTCCAAGAATCCCA...ATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATGTCTACTGACTCCTTaGCATAGAGACAGCCTATTC +
Preference number: 5 (lower is better)
Translates to: QLILTQSSRRECIRIPQKCLLTP*HRDSLF
Trigger: GAATAGGCTGTCTCTATGCAAAGGAGTCAGTAGACA...TTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp GTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATATGGCATGAAGTCAGTTaGCTTGATGAGCCATTAACA +
Preference number: 5 (lower is better)
Translates to: VIKEGMYTNSTEIVIRMIWHEVS*LDEPLT
Trigger: TGTTAATGGCTCATCAAGCAAACTGACTTCATGCCA...TATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAAAAGTACACTGTCTTTTaGGAGGCTGAATGTGGTTCG +
Preference number: 5 (lower is better)
Translates to: QLILTQSSRRECIRIPQKKYTVF*EAECGS
Trigger: CGAACCACATTCAGCCTCCAAAAAGACAGTGTACTT...TTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTAAGTACACTGTCTTTTaGGAGGCTGAATGTGGTTCG +
Preference number: 5 (lower is better)
Translates to: QLTQLILTQSSRRECIRIKYTVF*EAECGS
Trigger: CGAACCACATTCAGCCTCCAAAAAGACAGTGTACTT...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp GTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATACCTTTGTTCGTCGGGTaGTTCACATTGATGTTCAAA +
Preference number: 5 (lower is better)
Translates to: VIKEGMYTNSTEIVIRMIPLFVG*FTLMFK
Trigger: TTTGAACATCAATGTGAACAACCCGACGAACAAAGG...TATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATCCTTTGTTCGTCGGGTaGTTCACATTGATGTTCAAA +
Preference number: 5 (lower is better)
Translates to: SHQGGNVYEFHRNSHQNDPLFVG*FTLMFK
Trigger: TTTGAACATCAATGTGAACAACCCGACGAACAAAGG...ATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTTGGCATGGTCATGCTTaGTTGGGTCATAATGTACGA +
Preference number: 5 (lower is better)
Translates to: QLTQLILTQSSRRECIRIWHGHA*LGHNVR
Trigger: TCGTACATTATGACCCAACAAAGCATGACCATGCCA...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp GTGTCACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATAGTTATAATACATGTCTaGGGATACCTCAGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: VSQLTQLILTQSSRRECIVIIHV*GYLRQL
Trigger: AAGCTGCCTGAGGTATCCCAAGACATGTATTATAAC...TATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGTGACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCACTTTCTTGACCTTTaGAGGAGGGATATGAAAGTC +
Preference number: 5 (lower is better)
Translates to: QLTQLILTQSSRRECIRIHFLDL*RRDMKV
Trigger: GACTTTCATATCCCTCCTCAAAAGGTCAAGAAAGTG...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp ACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATCCAATATTAGAAACCTaGGACTCCATGGGATCATTG +
Preference number: 5 (lower is better)
Translates to: TTDSVNFNTVIKEGMYTNPILET*DSMGSL
Trigger: CAATGATCCCATGGAGTCCAAGGTTTCTAATATTGG...ATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp GTGTCACAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACAGTCACAGGATGTGTaGATTTGTTCTTCTCCATTA +
Preference number: 5 (lower is better)
Translates to: VSQLTQLILTQSSRRECIQSQDV*ICSSPL
Trigger: TAATGGAGAAGAACAAATCAACACATCCTGTGACTG...TATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTGTGACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp GTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATACAGTCACAGGATGTGTaGATTTGTTCTTCTCCATTA +
Preference number: 5 (lower is better)
Translates to: VIKEGMYTNSTEIVIRMIQSQDV*ICSSPL
Trigger: TAATGGAGAAGAACAAATCAACACATCCTGTGACTG...TATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATACTGGACACAAGGAGTaGTTTAGAAGGATTAACAGT +
Preference number: 5 (lower is better)
Translates to: SHQGGNVYEFHRNSHQNDTGHKE*FRRINS
Trigger: ACTGTTAATCCTTCTAAACAACTCCTTGTGTCCAGT...ATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATGGCATGAAGTCAGTTaGCTTGATGAGCCATTAACA +
Preference number: 5 (lower is better)
Translates to: QLILTQSSRRECIRIPQKWHEVS*LDEPLT
Trigger: TGTTAATGGCTCATCAAGCAAACTGACTTCATGCCA...TTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAACCTTTGTTCGTCGGGTaGTTCACATTGATGTTCAAA +
Preference number: 5 (lower is better)
Translates to: QLILTQSSRRECIRIPQKPLFVG*FTLMFK
Trigger: TTTGAACATCAATGTGAACAACCCGACGAACAAAGG...TTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCAGTCACAGGATGTGTaGATTTGTTCTTCTCCATTA +
Preference number: 5 (lower is better)
Translates to: QLTQLILTQSSRRECIRIQSQDV*ICSSPL
Trigger: TAATGGAGAAGAACAAATCAACACATCCTGTGACTG...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTACTGGACACAAGGAGTaGTTTAGAAGGATTAACAGT +
Preference number: 5 (lower is better)
Translates to: QLTQLILTQSSRRECIRITGHKE*FRRINS
Trigger: ACTGTTAATCCTTCTAAACAACTCCTTGTGTCCAGT...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp AGTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATTTCTCTTTCAAAGTTTaGTCTACTGACTCCTTTGCA +
Preference number: 5 (lower is better)
Translates to: SHQGGNVYEFHRNSHQNDFSFKV*STDSFA
Trigger: TGCAAAGGAGTCAGTAGACAAAACTTTGAAAGAGAA...ATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp GTCATCAAGGAGGGAATGTATACGAATTCCACAGAAATAGTCATCAGAATGATATTCTCTTTCAAAGTTTaGTCTACTGACTCCTTTGCA +
Preference number: 5 (lower is better)
Translates to: VIKEGMYTNSTEIVIRMIFSFKV*STDSFA
Trigger: TGCAAAGGAGTCAGTAGACAAAACTTTGAAAGAGAA...TATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGATGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTCATGGTCATGCTTTGTaGGGTCATAATGTACGATAT +
Preference number: 5 (lower is better)
Translates to: QLTQLILTQSSRRECIRIHGHAL*GHNVRY
Trigger: ATATCGTACATTATGACCCAACAAAGCATGACCATG...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS-3UTR CAA 90 bp CAACTGACTCAGTTAATTTTAACACAGTCATCAAGGAGGGAATGTATACGAATTTTCTCTTTCAAAGTTTaGTCTACTGACTCCTTTGCA +
Preference number: 5 (lower is better)
Translates to: QLTQLILTQSSRRECIRIFSFKV*STDSFA
Trigger: TGCAAAGGAGTCAGTAGACAAAACTTTGAAAGAGAA...AATTCGTATACATTCCCTCCTTGATGACTGTGTTAAAATTAACTGAGTCAGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS CAA 90 bp ATGCCCTGTCCAAGTCCACCCACAAAGAGGCGCTTCATTTCTCTGTaGCCTTGCATGGATGTTGGGCATCTATCAAGATTGCTGGAAACG +
Preference number: 6 (lower is better)
Translates to: MPCPSPPTKRRFISL*PCMDVGHLSRLLET
Trigger: CGTTTCCAGCAATCTTGATAGATGCCCAACATCCATGCAAGGCAACAGAGAAATGAAGCGCCTCTTTGTGGGTGGACTTGGACAGGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000222197.2
ENSMUST00000222333.2
CDS CAA 90 bp CACCCACAAAGAGGCGCTTCATTTCTCTGTTGCCTTGCATGGATGTaGGGCATCTATCAAGATTGCTGGAAACGTTTTCCAGAGGTCGCT +
Preference number: 6 (lower is better)
Translates to: HPQRGASFLCCLAWM*GIYQDCWKRFPEVA
Trigger: AGCGACCTCTGGAAAACGTTTCCAGCAATCTTGATAGATGCCCAACATCCATGCAAGGCAACAGAGAAATGAAGCGCCTCTTTGTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000222197.2
ENSMUST00000222333.2
CDS GCA 72 bp AGGCCACAATCTCCTCAGGAAGAATGCACTGTTGTCTaGCATTGTACAGGTCACCAGAAGTCTTGGGATTCT +
Preference number: 6 (lower is better)
Translates to: RPQSPQEECTVV*HCTGHQKSWDS
Trigger: AGAATCCCAAGACTTCTGGTGACCTGTACAATGGCAGACAACAGTGCATTCTTCCTGAGGAGATTGTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS CCA 72 bp TGCCCTGGTACTTCTGTTCCAGGCACAGCCTTCATATaGAAATCCACTGCTCCCATCTTTTCCAATAAGGTG +
Preference number: 6 (lower is better)
Translates to: CPGTSVPGTAFI*KSTAPIFSNKV
Trigger: CACCTTATTGGAAAAGATGGGAGCAGTGGATTTCCATATGAAGGCTGTGCCTGGAACAGAAGTACCAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021824.8
ENSMUST00000221083.2
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS CCA 72 bp GTGAGAAACCAGCTGGGCTTTTCTGAGGGTCTTCCCTaGGAGACACCTTTGATGATTTCTCAAGAGATTCGA +
Preference number: 6 (lower is better)
Translates to: VRNQLGFSEGLP*ETPLMISQEIR
Trigger: TCGAATCTCTTGAGAAATCATCAAAGGTGTCTCCCAGGGAAGACCCTCAGAAAAGCCCAGCTGGTTTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS CCA 72 bp AATGGCCTCATTCTCAGGAACCGCTTCTCCAGGGCTTaGCTTGCTATGATCTGCTTCTTCAGCAATATCTTC +
Preference number: 6 (lower is better)
Translates to: NGLILRNRFSRA*LAMICFFSNIF
Trigger: GAAGATATTGCTGAAGAAGCAGATCATAGCAAGCCAAGCCCTGGAGAAGCGGTTCCTGAGAATGAGGCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS CAA 90 bp CTGTCCAAGTCCACCCACAAAGAGGCGCTTCATTTCTCTGTTGCCTaGCATGGATGTTGGGCATCTATCAAGATTGCTGGAAACGTTTTC +
Preference number: 6 (lower is better)
Translates to: LSKSTHKEALHFSVA*HGCWASIKIAGNVF
Trigger: GAAAACGTTTCCAGCAATCTTGATAGATGCCCAACATCCATGCAAGGCAACAGAGAAATGAAGCGCCTCTTTGTGGGTGGACTTGGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000222197.2
ENSMUST00000222333.2
CDS CAA 90 bp TCCCTGGCTTTCTGCCATGCTGCCAAGGCGGCCAATCGCTTCTGGTaGTCTTCAGCTTGTTTATCCTTAGCATTTATACAGGATGCATTA +
Preference number: 6 (lower is better)
Translates to: SLAFCHAAKAANRFW*SSACLSLAFIQDAL
Trigger: TAATGCATCCTGTATAAATGCTAAGGATAAACAAGCTGAAGACAACCAGAAGCGATTGGCCGCCTTGGCAGCATGGCAGAAAGCCAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS CAA 90 bp AGAAACCAGCTGGGCTTTTCTGAGGGTCTTCCCTGGGAGACACCTTaGATGATTTCTCAAGAGATTCGAGGTTGCTTAAATTGGTCCTCT +
Preference number: 6 (lower is better)
Translates to: RNQLGFSEGLPWETP*MISQEIRGCLNWSS
Trigger: AGAGGACCAATTTAAGCAACCTCGAATCTCTTGAGAAATCATCAAAGGTGTCTCCCAGGGAAGACCCTCAGAAAAGCCCAGCTGGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS GCA 72 bp CCTCATTCTCAGGAACCGCTTCTCCAGGGCTTGGCTTaGTATGATCTGCTTCTTCAGCAATATCTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: PHSQEPLLQGLA*YDLLLQQYLLL
Trigger: AAGAAGAAGATATTGCTGAAGAAGCAGATCATAGCAAGCCAAGCCCTGGAGAAGCGGTTCCTGAGAATGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS CCA 72 bp GAGGCGCTTCATTTCTCTGTTGCCTTGCATGGATGTTaGGCATCTATCAAGATTGCTGGAAACGTTTTCCAG +
Preference number: 6 (lower is better)
Translates to: EALHFSVALHGC*ASIKIAGNVFQ
Trigger: CTGGAAAACGTTTCCAGCAATCTTGATAGATGCCCAACATCCATGCAAGGCAACAGAGAAATGAAGCGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000222197.2
ENSMUST00000222333.2
CDS CCA 72 bp CCACAAAGAGGCGCTTCATTTCTCTGTTGCCTTGCATaGATGTTGGGCATCTATCAAGATTGCTGGAAACGT +
Preference number: 6 (lower is better)
Translates to: PQRGASFLCCLA*MLGIYQDCWKR
Trigger: ACGTTTCCAGCAATCTTGATAGATGCCCAACATCCATGCAAGGCAACAGAGAAATGAAGCGCCTCTTTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000222197.2
ENSMUST00000222333.2
CDS CCA 72 bp GTCATTTTGTGGACCATTAGTCTCACTGTCTTTTCCTaGAAACTTCCGATGACTGCCAGCCAACTGCTCCAA +
Preference number: 6 (lower is better)
Translates to: VILWTISLTVFS*KLPMTASQLLQ
Trigger: TTGGAGCAGTTGGCTGGCAGTCATCGGAAGTTTCCAGGAAAAGACAGTGAGACTAATGGTCCACAAAATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS CAA 72 bp ACAATCTCCTCAGGAAGAATGCACTGTTGTCTGCCATaGTACAGGTCACCAGAAGTCTTGGGATTCTTGGAG +
Preference number: 6 (lower is better)
Translates to: TISSGRMHCCLP*YRSPEVLGFLE
Trigger: CTCCAAGAATCCCAAGACTTCTGGTGACCTGTACAATGGCAGACAACAGTGCATTCTTCCTGAGGAGATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS CAA 72 bp TTCTGCCATGCTGCCAAGGCGGCCAATCGCTTCTGGTaGTCTTCAGCTTGTTTATCCTTAGCATTTATACAG +
Preference number: 6 (lower is better)
Translates to: FCHAAKAANRFW*SSACLSLAFIQ
Trigger: CTGTATAAATGCTAAGGATAAACAAGCTGAAGACAACCAGAAGCGATTGGCCGCCTTGGCAGCATGGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS CAA 90 bp AACCACATGTTTAGGTTTCTGAGTACCAGAACTGGACACAAGGAGTaGTTTAGAAGGATTAACAGTACTAGGGGCTGTCCCGTGTGCAGT +
Preference number: 6 (lower is better)
Translates to: NHMFRFLSTRTGHKE*FRRINSTRGCPVCS
Trigger: ACTGCACACGGGACAGCCCCTAGTACTGTTAATCCTTCTAAACAACTCCTTGTGTCCAGTTCTGGTACTCAGAAACCTAAACATGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS TCA 72 bp ATCTCCACGTCAGAAACTTCTCCAAATCTGCCGAACTaGTTTTGTAGGTCTGTCTCAGAAATGCCCTGTCCA +
Preference number: 6 (lower is better)
Translates to: ISTSETSPNLPN*FCRSVSEMPCP
Trigger: TGGACAGGGCATTTCTGAGACAGACCTACAAAATCAGTTCGGCAGATTTGGAGAAGTTTCTGACGTGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000021824.8
ENSMUST00000221083.2
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000222333.2
ENSMUST00000223264.2
ENSMUST00000223467.2
CDS CAA 72 bp AGAGGCGCTTCATTTCTCTGTTGCCTTGCATGGATGTaGGGCATCTATCAAGATTGCTGGAAACGTTTTCCA +
Preference number: 6 (lower is better)
Translates to: RGASFLCCLAWM*GIYQDCWKRFP
Trigger: TGGAAAACGTTTCCAGCAATCTTGATAGATGCCCAACATCCATGCAAGGCAACAGAGAAATGAAGCGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021824.8
ENSMUST00000222197.2
ENSMUST00000222333.2
CDS CAA 72 bp CACAGATTCTTTCATCAGCTCCTTTTCTGGACAGCTTaGCTCCTGAGTGGATGTCTCTTCCGTTTCACTTTC +
Preference number: 6 (lower is better)
Translates to: HRFFHQLLFWTA*LLSGCLFRFTF
Trigger: GAAAGTGAAACGGAAGAGACATCCACTCAGGAGCAAAGCTGTCCAGAAAAGGAGCTGATGAAAGAATCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS CCA 72 bp TTCGGACTCTTCACTGTCACTGCCACTGGAGTCAGGTaGAAATTTGGGATTTACAAACTTTACTCCATGACA +
Preference number: 6 (lower is better)
Translates to: FGLFTVTATGVR*KFGIYKLYSMT
Trigger: TGTCATGGAGTAAAGTTTGTAAATCCCAAATTTCCACCTGACTCCAGTGGCAGTGACAGTGAAGAGTCCGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS CAA 72 bp AATGGCAACGGACCTGGGAGAGGATTTGTACTTCCCTaGTCACAACTAGTAGAGGACATTACTTTATGGTTC +
Preference number: 6 (lower is better)
Translates to: NGNGPGRGFVLP*SQLVEDITLWF
Trigger: GAACCATAAAGTAATGTCCTCTACTAGTTGTGACAAGGGAAGTACAAATCCTCTCCCAGGTCCGTTGCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS TCA 72 bp GTCTTGGGATTCTTGGAGGTTGTGTCAAATTTGCAGTaGCTGTCATTTTGTGGACCATTAGTCTCACTGTCT +
Preference number: 6 (lower is better)
Translates to: VLGFLEVVSNLQ*LSFCGPLVSLS
Trigger: AGACAGTGAGACTAATGGTCCACAAAATGACAGTCACTGCAAATTTGACACAACCTCCAAGAATCCCAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS TCA 72 bp CTTAGCATTTATACAGGATGCATTACTATCAGAAAGTaGGAAACCAGCTGGGCTTTTCTGAGGGTCTTCCCT +
Preference number: 6 (lower is better)
Translates to: LSIYTGCITIRK*ETSWAFLRVFP
Trigger: AGGGAAGACCCTCAGAAAAGCCCAGCTGGTTTCTCACTTTCTGATAGTAATGCATCCTGTATAAATGCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS CCA 72 bp CTTCATCTTCTTCGGACTCTTCACTGTCACTGCCACTaGAGTCAGGTGGAAATTTGGGATTTACAAACTTTA +
Preference number: 6 (lower is better)
Translates to: LHLLRTLHCHCH*SQVEIWDLQTL
Trigger: TAAAGTTTGTAAATCCCAAATTTCCACCTGACTCCAGTGGCAGTGACAGTGAAGAGTCCGAAGAAGATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS CAA 72 bp CTTTATGGTTCTGGTTCTCAAAAGTACACTGTCTTTTaGGAGGCTGAATGTGGTTCGGGTCATTCACCTTCT +
Preference number: 6 (lower is better)
Translates to: LYGSGSQKYTVF*EAECGSGHSPS
Trigger: AGAAGGTGAATGACCCGAACCACATTCAGCCTCCAAAAAGACAGTGTACTTTTGAGAACCAGAACCATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS TCA 72 bp CTACTGACTCCTTTGCATAGAGACAGCCTATTCCCTTaGAGGCCTGGAATTTTGGCTTTAAGATATCTTCTT +
Preference number: 6 (lower is better)
Translates to: LLTPLHRDSLFP*RPGILALRYLL
Trigger: AAGAAGATATCTTAAAGCCAAAATTCCAGGCCTTCAAGGGAATAGGCTGTCTCTATGCAAAGGAGTCAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS GCA 72 bp TATATTCTTCATCTTCTTCGGACTCTTCACTGTCACTaGCACTGGAGTCAGGTGGAAATTTGGGATTTACAA +
Preference number: 6 (lower is better)
Translates to: YILHLLRTLHCH*HWSQVEIWDLQ
Trigger: TTGTAAATCCCAAATTTCCACCTGACTCCAGTGGCAGTGACAGTGAAGAGTCCGAAGAAGATGAAGAATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS TCA 72 bp TCAGGTGGAAATTTGGGATTTACAAACTTTACTCCATaGCACAGGGCTGATTCTTTGTTGCTGTTAATTCCT +
Preference number: 6 (lower is better)
Translates to: SGGNLGFTNFTP*HRADSLLLLIP
Trigger: AGGAATTAACAGCAACAAAGAATCAGCCCTGTGTCATGGAGTAAAGTTTGTAAATCCCAAATTTCCACCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS GCA 72 bp GAGACACCTTTGATGATTTCTCAAGAGATTCGAGGTTaGTTAAATTGGTCCTCTCTTTCTCTAAAGCTTTTC +
Preference number: 6 (lower is better)
Translates to: ETPLMISQEIRG*LNWSSLSLKLF
Trigger: GAAAAGCTTTAGAGAAAGAGAGGACCAATTTAAGCAACCTCGAATCTCTTGAGAAATCATCAAAGGTGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS CCA 72 bp CTTCCCTTGTCACAACTAGTAGAGGACATTACTTTATaGTTCTGGTTCTCAAAAGTACACTGTCTTTTTGGA +
Preference number: 6 (lower is better)
Translates to: LPLSQLVEDITL*FWFSKVHCLFG
Trigger: TCCAAAAAGACAGTGTACTTTTGAGAACCAGAACCATAAAGTAATGTCCTCTACTAGTTGTGACAAGGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS CAA 72 bp GGAGACACCTTTGATGATTTCTCAAGAGATTCGAGGTaGCTTAAATTGGTCCTCTCTTTCTCTAAAGCTTTT +
Preference number: 6 (lower is better)
Translates to: GDTFDDFSRDSR*LKLVLSFSKAF
Trigger: AAAAGCTTTAGAGAAAGAGAGGACCAATTTAAGCAACCTCGAATCTCTTGAGAAATCATCAAAGGTGTCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS TCA 72 bp ATTAAAGGCAATATTCTCTTTCAAAGTTTTGTCTACTaGCTCCTTTGCATAGAGACAGCCTATTCCCTTGAA +
Preference number: 6 (lower is better)
Translates to: IKGNILFQSFVY*LLCIETAYSLE
Trigger: TTCAAGGGAATAGGCTGTCTCTATGCAAAGGAGTCAGTAGACAAAACTTTGAAAGAGAATATTGCCTTTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2
CDS TCA 72 bp TTTGGGATTTACAAACTTTACTCCATGACACAGGGCTaGTTCTTTGTTGCTGTTAATTCCTTGTACTTTTAT +
Preference number: 6 (lower is better)
Translates to: FGIYKLYSMTQG*FFVAVNSLYFY
Trigger: ATAAAAGTACAAGGAATTAACAGCAACAAAGAATCAGCCCTGTGTCATGGAGTAAAGTTTGTAAATCCCAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021824.8
ENSMUST00000221142.2
ENSMUST00000222197.2
ENSMUST00000223467.2