Pregenerated sensors for NOL7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063200Ensembl transcript IDs: ENSMUST00000071926.5, ENSMUST00000222499.2, ENSMUST00000222754.2
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCCCATTCCTTCAGAACTGGTTAATTTCCCCGGTTTGCTTGTGGTaGAGGAATGGCAGAAATAAACACGAAAAGTGGAAGCCAGTTAGA | + |
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Preference number: 1 (lower is better) Translates to: SPFLQNWLISPVCLW*RNGRNKHEKWKPVR Trigger: TCTAACTGGCTTCCACTTTTCGTGTTTATTTCTGCCATTCCTCCACCACAAGCAAACCGGGGAAATTAACCAGTTCTGAAGGAATGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222754.2 |
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| 3UTR GCA 90 bp | CTTCGTATTAGCCCATTCCTTCAGAACTGGTTAATTTCCCCGGTTTaGTTGTGGTGGAGGAATGGCAGAAATAAACACGAAAAGTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: LRISPFLQNWLISPV*LWWRNGRNKHEKWK Trigger: CTTCCACTTTTCGTGTTTATTTCTGCCATTCCTCCACCACAAGCAAACCGGGGAAATTAACCAGTTCTGAAGGAATGGGCTAATACGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222754.2 |
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| 3UTR CCA 90 bp | ATTAGCCCATTCCTTCAGAACTGGTTAATTTCCCCGGTTTGCTTGTaGTGGAGGAATGGCAGAAATAAACACGAAAAGTGGAAGCCAGTT | + |
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Preference number: 1 (lower is better) Translates to: ISPFLQNWLISPVCL*WRNGRNKHEKWKPV Trigger: AACTGGCTTCCACTTTTCGTGTTTATTTCTGCCATTCCTCCACCACAAGCAAACCGGGGAAATTAACCAGTTCTGAAGGAATGGGCTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222754.2 |
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| 3UTR CCA 90 bp | GCTGGCAAGATTGCTCAGCAGGTAAAGGTACTTAGTTACAACCTCTaGACACACATGGTAGGGAAGAATCTATATAAATTGTCTCCTGAC | + |
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Preference number: 1 (lower is better) Translates to: AGKIAQQVKVLSYNL*THMVGKNLYKLSPD Trigger: GTCAGGAGACAATTTATATAGATTCTTCCCTACCATGTGTGTCCAGAGGTTGTAACTAAGTACCTTTACCTGCTGAGCAATCTTGCCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071926.5 |
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| 3UTR-3UTR CCA 90 bp | TCCCCTGGTGTCAAATTGATATCAGAGGTCACATGTGAGAAAGCATCTGGACGTTCCCCGGTTTGCTTGTaGTGGAGGAATGGCAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: SPGVKLISEVTCEKASGRSPVCL*WRNGRN Trigger: ATTTCTGCCATTCCTCCACCACAAGCAAACCGGGGA...ACGTCCAGATGCTTTCTCACATGTGACCTCTGATATCAATTTGACACCAGGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222754.2 |
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| 3UTR-3UTR TCA 90 bp | AAGATTGCTCAGCAGGTAAAGGTACTTAGTTACAACCTCTGGACACACATGGTACACCAGCTATGTGTGTaGCACACACACCCCTACCTT | + |
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Preference number: 2 (lower is better) Translates to: KIAQQVKVLSYNLWTHMVHQLCV*HTHPYL Trigger: AAGGTAGGGGTGTGTGTGTCACACACATAGCTGGTG...TACCATGTGTGTCCAGAGGTTGTAACTAAGTACCTTTACCTGCTGAGCAATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071926.5 |
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| 3UTR CAA 90 bp | CGTATTAGCCCATTCCTTCAGAACTGGTTAATTTCCCCGGTTTGCTaGTGGTGGAGGAATGGCAGAAATAAACACGAAAAGTGGAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: RISPFLQNWLISPVC*WWRNGRNKHEKWKP Trigger: TGGCTTCCACTTTTCGTGTTTATTTCTGCCATTCCTCCACCACAAGCAAACCGGGGAAATTAACCAGTTCTGAAGGAATGGGCTAATACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222754.2 |
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| 3UTR-3UTR TCA 90 bp | GGCAAGATTGCTCAGCAGGTAAAGGTACTTAGTTACAACCTCTGGACACACATGTCTAGAAAAGAAATGTaGCCAGCTGTTTTCCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: GKIAQQVKVLSYNLWTHMSRKEM*PAVFPN Trigger: GTTTGGGAAAACAGCTGGTCACATTTCTTTTCTAGA...CATGTGTGTCCAGAGGTTGTAACTAAGTACCTTTACCTGCTGAGCAATCTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071926.5 |
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| 3UTR-3UTR CCA 90 bp | ATTCCTTCAGAACTGGTTAATTTCCCCGGTTTGCTTGTGGTGGAGGAATGGCAGAATAAACACGAAAAGTaGAAGCCAGTTAGACTTTGC | + |
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Preference number: 2 (lower is better) Translates to: IPSELVNFPGLLVVEEWQNKHEK*KPVRLC Trigger: GCAAAGTCTAACTGGCTTCCACTTTTCGTGTTTATT...CTGCCATTCCTCCACCACAAGCAAACCGGGGAAATTAACCAGTTCTGAAGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222754.2 |
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| 3UTR-3UTR CCA 90 bp | AAGATTGCTCAGCAGGTAAAGGTACTTAGTTACAACCTCTGGACACACATGGTAAAAAGACTTCATGAATaGTCTCTGTTCCCCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: KIAQQVKVLSYNLWTHMVKRLHE*SLFPFL Trigger: CAGGAAGGGGAACAGAGACCATTCATGAAGTCTTTT...TACCATGTGTGTCCAGAGGTTGTAACTAAGTACCTTTACCTGCTGAGCAATCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071926.5 |
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| 3UTR-3UTR TCA 90 bp | AAGATTGCTCAGCAGGTAAAGGTACTTAGTTACAACCTCTGGACACACATGGTATCAGTGACTAAATTTTaGGAAATGAACCCTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: KIAQQVKVLSYNLWTHMVSVTKF*EMNPLC Trigger: GCAGAGAGGGTTCATTTCTCAAAATTTAGTCACTGA...TACCATGTGTGTCCAGAGGTTGTAACTAAGTACCTTTACCTGCTGAGCAATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071926.5 |
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| 3UTR-3UTR TCA 90 bp | AAGGTACTAGCTGAGGTTGAAGTCTTCTCCAACACATGTTTATTTACCTGTTCTCTAAATTTTGAGAAATaGACCCTCTCTGCACCCAGT | + |
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Preference number: 2 (lower is better) Translates to: KVLAEVEVFSNTCLFTCSLNFEK*TLSAPS Trigger: ACTGGGTGCAGAGAGGGTTCATTTCTCAAAATTTAG...AGAACAGGTAAATAAACATGTGTTGGAGAAGACTTCAACCTCAGCTAGTACCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071926.5 |
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| 3UTR GCA 72 bp | AGCCCATTCCTTCAGAACTGGTTAATTTCCCCGGTTTaGTTGTGGTGGAGGAATGGCAGAAATAAACACGAA | + |
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Preference number: 3 (lower is better) Translates to: SPFLQNWLISPV*LWWRNGRNKHE Trigger: TTCGTGTTTATTTCTGCCATTCCTCCACCACAAGCAAACCGGGGAAATTAACCAGTTCTGAAGGAATGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222754.2 |
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| 3UTR CCA 72 bp | CTCTTCCTTCTTCGTATTAGCCCATTCCTTCAGAACTaGTTAATTTCCCCGGTTTGCTTGTGGTGGAGGAAT | + |
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Preference number: 3 (lower is better) Translates to: LFLLRISPFLQN*LISPVCLWWRN Trigger: ATTCCTCCACCACAAGCAAACCGGGGAAATTAACCAGTTCTGAAGGAATGGGCTAATACGAAGAAGGAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222754.2 |
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| 3UTR TCA 72 bp | ATCCCCTGGTGTCAAATTGATATCAGAGGTCACATGTaGGAAAGCATCTGGACGTTTGTCTCTTCCTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: IPWCQIDIRGHM*ESIWTFVSSFF Trigger: GAAGAAGGAAGAGACAAACGTCCAGATGCTTTCTCACATGTGACCTCTGATATCAATTTGACACCAGGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222754.2 |
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| 3UTR CCA 72 bp | CTTCAGAACTGGTTAATTTCCCCGGTTTGCTTGTGGTaGAGGAATGGCAGAAATAAACACGAAAAGTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: LQNWLISPVCLW*RNGRNKHEKWK Trigger: CTTCCACTTTTCGTGTTTATTTCTGCCATTCCTCCACCACAAGCAAACCGGGGAAATTAACCAGTTCTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222754.2 |
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| 3UTR CCA 72 bp | TTCCTTCAGAACTGGTTAATTTCCCCGGTTTGCTTGTaGTGGAGGAATGGCAGAAATAAACACGAAAAGTGG | + |
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Preference number: 3 (lower is better) Translates to: FLQNWLISPVCL*WRNGRNKHEKW Trigger: CCACTTTTCGTGTTTATTTCTGCCATTCCTCCACCACAAGCAAACCGGGGAAATTAACCAGTTCTGAAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222754.2 |
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| 3UTR-3UTR CAA 90 bp | AAGATTGCTCAGCAGGTAAAGGTACTTAGTTACAACCTCTGGACACACATGGTAAAGAATCTATATAAATaGTCTCCTGACACACCAGCT | + |
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Preference number: 3 (lower is better) Translates to: KIAQQVKVLSYNLWTHMVKNLYK*SPDTPA Trigger: AGCTGGTGTGTCAGGAGACAATTTATATAGATTCTT...TACCATGTGTGTCCAGAGGTTGTAACTAAGTACCTTTACCTGCTGAGCAATCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071926.5 |
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| CDS-3UTR CCA 90 bp | TGGGGCCACTCAAAAGATGAAGATTCCTCTTTAAGTGAGTGCTTCTCCCTCCAGTCCTCCGAGGCCGCCTaGTCCTCGTCCACCATCGCC | + |
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Preference number: 4 (lower is better) Translates to: WGHSKDEDSSLSECFSLQSSEAA*SSSTIA Trigger: GGCGATGGTGGACGAGGACCAGGCGGCCTCGGAGGA...CTGGAGGGAGAAGCACTCACTTAAAGAGGAATCTTCATCTTTTGAGTGGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071926.5 |
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| CDS-3UTR CCA 90 bp | AAGGTACTAGCTGAGGTTGAAGTCTTCTCCAACACATGTTTATTTACCTGTTCTCTTCCGCCTGGGCGCTaGCGAAAGTCAGCTCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: KVLAEVEVFSNTCLFTCSLPPGR*RKSAPP Trigger: CGGAGGAGCTGACTTTCGCCAGCGCCCAGGCGGAAG...AGAACAGGTAAATAAACATGTGTTGGAGAAGACTTCAACCTCAGCTAGTACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071926.5 |
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| CDS-3UTR CCA 90 bp | TCTCTGCACCCAGTAATCTTAAACTATGCATGCAAAATGCAGGTTTTTCATTTCTCCCGGGCTTCCGCCTaGGCGCTGGCGAAAGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: SLHPVILNYACKMQVFHFSRASA*ALAKVS Trigger: GCTGACTTTCGCCAGCGCCCAGGCGGAAGCCCGGGA...GAAATGAAAAACCTGCATTTTGCATGCATAGTTTAAGATTACTGGGTGCAGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071926.5 |
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| CDS-3UTR TCA 90 bp | GGCAAGATTGCTCAGCAGGTAAAGGTACTTAGTTACAACCTCTGGACACACATGTTTTCTTCTGTTCGATaGACAGCTCCTCGCGCCGTT | + |
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Preference number: 4 (lower is better) Translates to: GKIAQQVKVLSYNLWTHMFSSVR*TAPRAV Trigger: AACGGCGCGAGGAGCTGTTCATCGAACAGAAGAAAA...CATGTGTGTCCAGAGGTTGTAACTAAGTACCTTTACCTGCTGAGCAATCTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071926.5 |
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| CDS-3UTR CCA 90 bp | TGGGGCCACTCAAAAGATGAAGATTCCTCTTTAAGTGAGTGCTTCTCCCTCCAGGTGCTAGTCAGAAACTaGGCTGCAGCCTTTTTCACT | + |
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Preference number: 4 (lower is better) Translates to: WGHSKDEDSSLSECFSLQVLVRN*AAAFFT Trigger: AGTGAAAAAGGCTGCAGCCCAGTTTCTGACTAGCAC...CTGGAGGGAGAAGCACTCACTTAAAGAGGAATCTTCATCTTTTGAGTGGCCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000071926.5 |
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| CDS-3UTR CCA 90 bp | AGCCCATTCCTTCAGAACTGGTTAATTTCCCCGGTTTGCTTGTGGTGGAGGAATGTGCTAGTCAGAAACTaGGCTGCAGCCTTTTTCACT | + |
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Preference number: 4 (lower is better) Translates to: SPFLQNWLISPVCLWWRNVLVRN*AAAFFT Trigger: AGTGAAAAAGGCTGCAGCCCAGTTTCTGACTAGCAC...ATTCCTCCACCACAAGCAAACCGGGGAAATTAACCAGTTCTGAAGGAATGGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222754.2 |
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| CDS-3UTR TCA 90 bp | AGGTCACATGTGAGAAAGCATCTGGACGTTTGTCTCTTCCTTCTTCGTATTAGCGGCTGCCTCTTGCCTTaGATCTCTCAGATCTTCATC | + |
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Preference number: 4 (lower is better) Translates to: RSHVRKHLDVCLFLLRISGCLLP*ISQIFI Trigger: GATGAAGATCTGAGAGATTCAAGGCAAGAGGCAGCC...GCTAATACGAAGAAGGAAGAGACAAACGTCCAGATGCTTTCTCACATGTGACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222754.2 |
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| CDS-3UTR TCA 90 bp | GGCAAGATTGCTCAGCAGGTAAAGGTACTTAGTTACAACCTCTGGACACACATGAGCCTTTTTCACTGGTaGCCTCTTGTTGTTCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: GKIAQQVKVLSYNLWTHMSLFHW*PLVVQR Trigger: TCTCTGAACAACAAGAGGTCACCAGTGAAAAAGGCT...CATGTGTGTCCAGAGGTTGTAACTAAGTACCTTTACCTGCTGAGCAATCTTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071926.5 |
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| CDS-3UTR GCA 90 bp | GGCAAGATTGCTCAGCAGGTAAAGGTACTTAGTTACAACCTCTGGACACACATGGAAGCTGTAGTTAGCTaGTCTAATACAGCATCTGGA | + |
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Preference number: 4 (lower is better) Translates to: GKIAQQVKVLSYNLWTHMEAVVS*SNTASG Trigger: TCCAGATGCTGTATTAGAGCAGCTAACTACAGCTTC...CATGTGTGTCCAGAGGTTGTAACTAAGTACCTTTACCTGCTGAGCAATCTTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071926.5 |
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| CDS-3UTR CCA 90 bp | GGCAAGATTGCTCAGCAGGTAAAGGTACTTAGTTACAACCTCTGGACACACATGCCATATAAACAACTGTaGATGAAGTGTTTGGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: GKIAQQVKVLSYNLWTHMPYKQL*MKCLAA Trigger: GGCAGCCAAACACTTCATCCACAGTTGTTTATATGG...CATGTGTGTCCAGAGGTTGTAACTAAGTACCTTTACCTGCTGAGCAATCTTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071926.5 |
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| 3UTR CAA 72 bp | CCATTCCTTCAGAACTGGTTAATTTCCCCGGTTTGCTaGTGGTGGAGGAATGGCAGAAATAAACACGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: PFLQNWLISPVC*WWRNGRNKHEK Trigger: CTTTTCGTGTTTATTTCTGCCATTCCTCCACCACAAGCAAACCGGGGAAATTAACCAGTTCTGAAGGAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222754.2 |
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| CDS-3UTR TCA 90 bp | GGCAAGATTGCTCAGCAGGTAAAGGTACTTAGTTACAACCTCTGGACACACATGTTTTACGTTTTCTGGTaGTTTCTTTATGTCGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: GKIAQQVKVLSYNLWTHMFYVFW*FLYVGL Trigger: GAGGCCGACATAAAGAAATCACCAGAAAACGTAAAA...CATGTGTGTCCAGAGGTTGTAACTAAGTACCTTTACCTGCTGAGCAATCTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071926.5 |
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| CDS-3UTR GCA 90 bp | TGGGGCCACTCAAAAGATGAAGATTCCTCTTTAAGTGAGTGCTTCTCCCTCCAGGGAGTTTCTTCCTTTTaGATGCTGTTCACTTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: WGHSKDEDSSLSECFSLQGVSSF*MLFTFL Trigger: AAGAAAAGTGAACAGCATGCAAAAGGAAGAAACTCC...CTGGAGGGAGAAGCACTCACTTAAAGAGGAATCTTCATCTTTTGAGTGGCCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000071926.5 |
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| CDS-3UTR CCA 90 bp | AGGTCACATGTGAGAAAGCATCTGGACGTTTGTCTCTTCCTTCTTCGTATTAGCCCATATAAACAACTGTaGATGAAGTGTTTGGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: RSHVRKHLDVCLFLLRISPYKQL*MKCLAA Trigger: GGCAGCCAAACACTTCATCCACAGTTGTTTATATGG...GCTAATACGAAGAAGGAAGAGACAAACGTCCAGATGCTTTCTCACATGTGACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222754.2 |
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| CDS-3UTR TCA 90 bp | TCTCTGCACCCAGTAATCTTAAACTATGCATGCAAAATGCAGGTTTTTCATTTCGGCTGCCTCTTGCCTTaGATCTCTCAGATCTTCATC | + |
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Preference number: 4 (lower is better) Translates to: SLHPVILNYACKMQVFHFGCLLP*ISQIFI Trigger: GATGAAGATCTGAGAGATTCAAGGCAAGAGGCAGCC...GAAATGAAAAACCTGCATTTTGCATGCATAGTTTAAGATTACTGGGTGCAGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071926.5 |
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| CDS GCA 90 bp | GCTCCTCGCGCCGTTTCCTCTTCTCCTTCAACAGCGTTTTATCCCTaGGAGCACTCGCGCGCACGCGCAGCTCCTCCTCCCGGGCTTCCG | + |
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Preference number: 5 (lower is better) Translates to: APRAVSSSPSTAFYP*EHSRARAAPPPGLP Trigger: CGGAAGCCCGGGAGGAGGAGCTGCGCGTGCGCGCGAGTGCTCGCAGGGATAAAACGCTGTTGAAGGAGAAGAGGAAACGGCGCGAGGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071926.5 ENSMUST00000222499.2 |
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| CDS CCA 90 bp | CCAACAGATGAACGCGCTATCTTACCCCAGGTGCTAGTCAGAAACTaGGCTGCAGCCTTTTTCACTGGTGACCTCTTGTTGTTCAGAGAC | + |
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Preference number: 5 (lower is better) Translates to: PTDERAILPQVLVRN*AAAFFTGDLLLFRD Trigger: GTCTCTGAACAACAAGAGGTCACCAGTGAAAAAGGCTGCAGCCCAGTTTCTGACTAGCACCTGGGGTAAGATAGCGCGTTCATCTGTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222499.2 |
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| CDS TCA 90 bp | TCCCCAGGTGCTAGTCAGAAACTGGGCTGCAGCCTTTTTCACTGGTaGCCTCTTGTTGTTCAGAGACAGGAACTTGTTTACAGTAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: SPGASQKLGCSLFHW*PLVVQRQELVYSSP Trigger: AGGACTACTGTAAACAAGTTCCTGTCTCTGAACAACAAGAGGTCACCAGTGAAAAAGGCTGCAGCCCAGTTTCTGACTAGCACCTGGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071926.5 ENSMUST00000222754.2 |
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| CDS TCA 90 bp | ACCCCAGGTGCTAGTCAGAAACTGGGCTGCAGCCTTTTTCACTGGTaGCCTCTTGTTGTTCAGAGACAGGAACTTGTTTACAGTAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: TPGASQKLGCSLFHW*PLVVQRQELVYSSP Trigger: AGGACTACTGTAAACAAGTTCCTGTCTCTGAACAACAAGAGGTCACCAGTGAAAAAGGCTGCAGCCCAGTTTCTGACTAGCACCTGGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222499.2 |
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| CDS-3UTR CAA 90 bp | TTCCTTCAGAACTGGTTAATTTCCCCGGTTTGCTTGTGGTGGAGGAATGGCAGACTGTGGATGAAGTGTTaGGCTGCCTCTTGCCTTGAA | + |
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Preference number: 5 (lower is better) Translates to: FLQNWLISPVCLWWRNGRLWMKC*AASCLE Trigger: TTCAAGGCAAGAGGCAGCCAAACACTTCATCCACAG...TCTGCCATTCCTCCACCACAAGCAAACCGGGGAAATTAACCAGTTCTGAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222754.2 |
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| CDS-3UTR CAA 90 bp | TGGGGCCACTCAAAAGATGAAGATTCCTCTTTAAGTGAGTGCTTCTCCCTCCAGCCTCTTGGCATTTTGTaGTTTCTGAGCTCCCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: WGHSKDEDSSLSECFSLQPLGIL*FLSSPG Trigger: ACCTGGGGAGCTCAGAAACAACAAAATGCCAAGAGG...CTGGAGGGAGAAGCACTCACTTAAAGAGGAATCTTCATCTTTTGAGTGGCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000071926.5 |
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| CDS-3UTR CAA 90 bp | TCCCCGGTTTGCTTGTGGTGGAGGAATGGCAGAAATAAACACGAAAAGTGGAAGCCTCTTGGCATTTTGTaGTTTCTGAGCTCCCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: SPVCLWWRNGRNKHEKWKPLGIL*FLSSPG Trigger: ACCTGGGGAGCTCAGAAACAACAAAATGCCAAGAGG...CTTCCACTTTTCGTGTTTATTTCTGCCATTCCTCCACCACAAGCAAACCGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000222754.2 |
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| CDS-3UTR CAA 90 bp | GGCAAGATTGCTCAGCAGGTAAAGGTACTTAGTTACAACCTCTGGACACACATGCTGTGGATGAAGTGTTaGGCTGCCTCTTGCCTTGAA | + |
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Preference number: 5 (lower is better) Translates to: GKIAQQVKVLSYNLWTHMLWMKC*AASCLE Trigger: TTCAAGGCAAGAGGCAGCCAAACACTTCATCCACAG...CATGTGTGTCCAGAGGTTGTAACTAAGTACCTTTACCTGCTGAGCAATCTTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071926.5 |
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| CDS-3UTR CAA 90 bp | AGCCCATTCCTTCAGAACTGGTTAATTTCCCCGGTTTGCTTGTGGTGGAGGAATACTGGTGACCTCTTGTaGTTCAGAGACAGGAACTTG | + |
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Preference number: 5 (lower is better) Translates to: SPFLQNWLISPVCLWWRNTGDLL*FRDRNL Trigger: CAAGTTCCTGTCTCTGAACAACAAGAGGTCACCAGT...ATTCCTCCACCACAAGCAAACCGGGGAAATTAACCAGTTCTGAAGGAATGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222754.2 |
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| CDS-3UTR CAA 90 bp | TGGGGCCACTCAAAAGATGAAGATTCCTCTTTAAGTGAGTGCTTCTCCCTCCAGTTCACTGGTGACCTCTaGTTGTTCAGAGACAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: WGHSKDEDSSLSECFSLQFTGDL*LFRDRN Trigger: GTTCCTGTCTCTGAACAACAAGAGGTCACCAGTGAA...CTGGAGGGAGAAGCACTCACTTAAAGAGGAATCTTCATCTTTTGAGTGGCCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071926.5 |
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| CDS-3UTR CAA 90 bp | CCAAAAATAAGGCAGGGCTTATCCCCTGGTGTCAAATTGATATCAGAGGTCACATGGCTGCCTCTTGCCTaGAATCTCTCAGATCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: PKIRQGLSPGVKLISEVTWLPLA*NLSDLH Trigger: ATGAAGATCTGAGAGATTCAAGGCAAGAGGCAGCCA...TGTGACCTCTGATATCAATTTGACACCAGGGGATAAGCCCTGCCTTATTTTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222754.2 |
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| CDS-3UTR CAA 90 bp | AAGATTGCTCAGCAGGTAAAGGTACTTAGTTACAACCTCTGGACACACATGGTAACTGGTGACCTCTTGTaGTTCAGAGACAGGAACTTG | + |
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Preference number: 5 (lower is better) Translates to: KIAQQVKVLSYNLWTHMVTGDLL*FRDRNL Trigger: CAAGTTCCTGTCTCTGAACAACAAGAGGTCACCAGT...TACCATGTGTGTCCAGAGGTTGTAACTAAGTACCTTTACCTGCTGAGCAATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071926.5 |
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| CDS-3UTR CAA 90 bp | TTTGCTTGTGGTGGAGGAATGGCAGAAATAAACACGAAAAGTGGAAGCCAGTTATTCACTGGTGACCTCTaGTTGTTCAGAGACAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: FACGGGMAEINTKSGSQLFTGDL*LFRDRN Trigger: GTTCCTGTCTCTGAACAACAAGAGGTCACCAGTGAA...TAACTGGCTTCCACTTTTCGTGTTTATTTCTGCCATTCCTCCACCACAAGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222754.2 |
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| CDS-3UTR CAA 90 bp | AGGTCACATGTGAGAAAGCATCTGGACGTTTGTCTCTTCCTTCTTCGTATTAGCAAACCTCTTGGCATTTaGTTGTTTCTGAGCTCCCCA | + |
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Preference number: 5 (lower is better) Translates to: RSHVRKHLDVCLFLLRISKPLGI*LFLSSP Trigger: TGGGGAGCTCAGAAACAACAAAATGCCAAGAGGTTT...GCTAATACGAAGAAGGAAGAGACAAACGTCCAGATGCTTTCTCACATGTGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222754.2 |
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| CDS GCA 90 bp | TCTGAACCATATAAACAACTGTGGATGAAGTGTTTGGCTGCCTCTTaGCTTGAATCTCTCAGATCTTCATCTTTAAGCCTTACAGCCATG | + |
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Preference number: 5 (lower is better) Translates to: SEPYKQLWMKCLAAS*LESLRSSSLSLTAM Trigger: CATGGCTGTAAGGCTTAAAGATGAAGATCTGAGAGATTCAAGGCAAGAGGCAGCCAAACACTTCATCCACAGTTGTTTATATGGTTCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071926.5 ENSMUST00000222499.2 |
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| CDS-3UTR CAA 90 bp | TCTCTGCACCCAGTAATCTTAAACTATGCATGCAAAATGCAGGTTTTTCATTTCTGGCTGCCTCTTGCCTaGAATCTCTCAGATCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: SLHPVILNYACKMQVFHFWLPLA*NLSDLH Trigger: ATGAAGATCTGAGAGATTCAAGGCAAGAGGCAGCCA...GAAATGAAAAACCTGCATTTTGCATGCATAGTTTAAGATTACTGGGTGCAGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071926.5 |
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| CDS CCA 90 bp | TTGTTTACAGTAGTCCTTTTGGAATCTGAACCATATAAACAACTGTaGATGAAGTGTTTGGCTGCCTCTTGCCTTGAATCTCTCAGATCT | + |
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Preference number: 5 (lower is better) Translates to: LFTVVLLESEPYKQL*MKCLAASCLESLRS Trigger: AGATCTGAGAGATTCAAGGCAAGAGGCAGCCAAACACTTCATCCACAGTTGTTTATATGGTTCAGATTCCAAAAGGACTACTGTAAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071926.5 ENSMUST00000222499.2 ENSMUST00000222754.2 |
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| CDS-3UTR CAA 90 bp | TCTCTGCACCCAGTAATCTTAAACTATGCATGCAAAATGCAGGTTTTTCATTTCAAACCTCTTGGCATTTaGTTGTTTCTGAGCTCCCCA | + |
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Preference number: 5 (lower is better) Translates to: SLHPVILNYACKMQVFHFKPLGI*LFLSSP Trigger: TGGGGAGCTCAGAAACAACAAAATGCCAAGAGGTTT...GAAATGAAAAACCTGCATTTTGCATGCATAGTTTAAGATTACTGGGTGCAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000071926.5 |
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| CDS-3UTR CAA 90 bp | AAGGTACTAGCTGAGGTTGAAGTCTTCTCCAACACATGTTTATTTACCTGTTCTTGGAGTTTCTTCCTTTaGCATGCTGTTCACTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: KVLAEVEVFSNTCLFTCSWSFFL*HAVHFS Trigger: AGAAAAGTGAACAGCATGCAAAAGGAAGAAACTCCA...AGAACAGGTAAATAAACATGTGTTGGAGAAGACTTCAACCTCAGCTAGTACCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071926.5 |
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| CDS TCA 72 bp | GCTAGTCAGAAACTGGGCTGCAGCCTTTTTCACTGGTaGCCTCTTGTTGTTCAGAGACAGGAACTTGTTTAC | + |
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Preference number: 6 (lower is better) Translates to: ASQKLGCSLFHW*PLVVQRQELVY Trigger: GTAAACAAGTTCCTGTCTCTGAACAACAAGAGGTCACCAGTGAAAAAGGCTGCAGCCCAGTTTCTGACTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071926.5 ENSMUST00000222499.2 ENSMUST00000222754.2 |
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| CDS CAA 90 bp | GTGCTAGTCAGAAACTGGGCTGCAGCCTTTTTCACTGGTGACCTCTaGTTGTTCAGAGACAGGAACTTGTTTACAGTAGTCCTTTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: VLVRNWAAAFFTGDL*LFRDRNLFTVVLLE Trigger: TTCCAAAAGGACTACTGTAAACAAGTTCCTGTCTCTGAACAACAAGAGGTCACCAGTGAAAAAGGCTGCAGCCCAGTTTCTGACTAGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071926.5 ENSMUST00000222499.2 ENSMUST00000222754.2 |
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| CDS CAA 90 bp | CTAGTCAGAAACTGGGCTGCAGCCTTTTTCACTGGTGACCTCTTGTaGTTCAGAGACAGGAACTTGTTTACAGTAGTCCTTTTGGAATCT | + |
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Preference number: 6 (lower is better) Translates to: LVRNWAAAFFTGDLL*FRDRNLFTVVLLES Trigger: AGATTCCAAAAGGACTACTGTAAACAAGTTCCTGTCTCTGAACAACAAGAGGTCACCAGTGAAAAAGGCTGCAGCCCAGTTTCTGACTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071926.5 ENSMUST00000222499.2 ENSMUST00000222754.2 |
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| CDS TCA 72 bp | ACAACTGTGGATGAAGTGTTTGGCTGCCTCTTGCCTTaGATCTCTCAGATCTTCATCTTTAAGCCTTACAGC | + |
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Preference number: 6 (lower is better) Translates to: TTVDEVFGCLLP*ISQIFIFKPYS Trigger: GCTGTAAGGCTTAAAGATGAAGATCTGAGAGATTCAAGGCAAGAGGCAGCCAAACACTTCATCCACAGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071926.5 ENSMUST00000222499.2 |
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| CDS GCA 72 bp | GATTTCTTTATGTCGGCCTCTGAAGCTGTAGTTAGCTaGTCTAATACAGCATCTGGAAGCAGCTTTCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: DFFMSASEAVVS*SNTASGSSFLF Trigger: GAAAAGAAAGCTGCTTCCAGATGCTGTATTAGAGCAGCTAACTACAGCTTCAGAGGCCGACATAAAGAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071926.5 ENSMUST00000222499.2 |
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| CDS CAA 90 bp | GTCCTTTTGGAATCTGAACCATATAAACAACTGTGGATGAAGTGTTaGGCTGCCTCTTGCCTTGAATCTCTCAGATCTTCATCTTTAAGC | + |
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Preference number: 6 (lower is better) Translates to: VLLESEPYKQLWMKC*AASCLESLRSSSLS Trigger: GCTTAAAGATGAAGATCTGAGAGATTCAAGGCAAGAGGCAGCCAAACACTTCATCCACAGTTGTTTATATGGTTCAGATTCCAAAAGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071926.5 ENSMUST00000222499.2 |
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| CDS CAA 90 bp | GACCTCTTGTTGTTCAGAGACAGGAACTTGTTTACAGTAGTCCTTTaGGAATCTGAACCATATAAACAACTGTGGATGAAGTGTTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: DLLLFRDRNLFTVVL*ESEPYKQLWMKCLA Trigger: AGCCAAACACTTCATCCACAGTTGTTTATATGGTTCAGATTCCAAAAGGACTACTGTAAACAAGTTCCTGTCTCTGAACAACAAGAGGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071926.5 ENSMUST00000222499.2 ENSMUST00000222754.2 |
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| CDS GCA 72 bp | TATAAACAACTGTGGATGAAGTGTTTGGCTGCCTCTTaGCTTGAATCTCTCAGATCTTCATCTTTAAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: YKQLWMKCLAAS*LESLRSSSLSL Trigger: AAGGCTTAAAGATGAAGATCTGAGAGATTCAAGGCAAGAGGCAGCCAAACACTTCATCCACAGTTGTTTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071926.5 ENSMUST00000222499.2 |
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| CDS CAA 72 bp | TTGTTCAGAGACAGGAACTTGTTTACAGTAGTCCTTTaGGAATCTGAACCATATAAACAACTGTGGATGAAG | + |
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Preference number: 6 (lower is better) Translates to: LFRDRNLFTVVL*ESEPYKQLWMK Trigger: CTTCATCCACAGTTGTTTATATGGTTCAGATTCCAAAAGGACTACTGTAAACAAGTTCCTGTCTCTGAACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071926.5 ENSMUST00000222499.2 ENSMUST00000222754.2 |
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