Pregenerated sensors for NOL12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033099Ensembl transcript IDs: ENSMUST00000041164.4, ENSMUST00000123013.2, ENSMUST00000138880.9
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTCAGCTGTCTGCAGCACCCACCGGCACCGGGACACTGTCCATTaGTGTCCCCGCCCAGGGCCTGCCGGGAGCCTTTTAACCCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: PSAVCSTHRHRDTVH*CPRPGPAGSLLTLC Trigger: GCAGAGGGTTAAAAGGCTCCCGGCAGGCCCTGGGCGGGGACAGCAATGGACAGTGTCCCGGTGCCGGTGGGTGCTGCAGACAGCTGAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR TCA 90 bp | AGGACTAGTGTGTGCCACCATGGCAGCTCCCCTCGCTGCTGCTCCTaGAGTCCAAACAGATGCGACTCTGGGCAGCTGGGGAGACAGGGA | + |
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Preference number: 1 (lower is better) Translates to: RTSVCHHGSSPRCCS*SPNRCDSGQLGRQG Trigger: TCCCTGTCTCCCCAGCTGCCCAGAGTCGCATCTGTTTGGACTTCAGGAGCAGCAGCGAGGGGAGCTGCCATGGTGGCACACACTAGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR CCA 90 bp | GACAGGTATCAGGTAGTCACTGCTCTTGGAGCAGAGGGCAGGGAATaGGGAGAAGGGCTGAGGTCAGGCCAAGCCAGCTCCCAGGAAAGG | + |
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Preference number: 1 (lower is better) Translates to: DRYQVVTALGAEGRE*GEGLRSGQASSQER Trigger: CCTTTCCTGGGAGCTGGCTTGGCCTGACCTCAGCCCTTCTCCCCATTCCCTGCCCTCTGCTCCAAGAGCAGTGACTACCTGATACCTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR CCA 90 bp | TGTGTGGACCTGAACCTGCCACACAGCCCAAGCTGGCCTAGAACTTaGGGTCTCCTCTCTCAGCCCCTTGAGCTGCTGGCACTAGCGACA | + |
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Preference number: 1 (lower is better) Translates to: CVDLNLPHSPSWPRT*GLLSQPLELLALAT Trigger: TGTCGCTAGTGCCAGCAGCTCAAGGGGCTGAGAGAGGAGACCCCAAGTTCTAGGCCAGCTTGGGCTGTGTGGCAGGTTCAGGTCCACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR TCA 90 bp | AGTCACCCTCACCGCCACCAGGGGGCCTCTTTAAAAATAAAGGCCTaGCCCTGTCCTCATTCAGCCGGGCCAGAGCTTCCTCCTCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: SHPHRHQGASLKIKA*PCPHSAGPELPPLL Trigger: GAGGAGAGGAGGAAGCTCTGGCCCGGCTGAATGAGGACAGGGTCAGGCCTTTATTTTTAAAGAGGCCCCCTGGTGGCGGTGAGGGTGACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR GCA 90 bp | TCAAAGGGCATCTTTGATCAGAAGCCTTCTCAGGTGCTCTTGTCCTaGTCTGGAGTCCCTCAGCTGTCTGCAGCACCCACCGGCACCGGG | + |
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Preference number: 1 (lower is better) Translates to: SKGIFDQKPSQVLLS*SGVPQLSAAPTGTG Trigger: CCCGGTGCCGGTGGGTGCTGCAGACAGCTGAGGGACTCCAGAGCAGGACAAGAGCACCTGAGAAGGCTTCTGATCAAAGATGCCCTTTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR CCA 90 bp | CAGCTCCCCTCGCTGCTGCTCCTGAAGTCCAAACAGATGCGACTCTaGGCAGCTGGGGAGACAGGGAAGGAGTTCGTGATTAGAGAAACA | + |
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Preference number: 1 (lower is better) Translates to: QLPSLLLLKSKQMRL*AAGETGKEFVIRET Trigger: TGTTTCTCTAATCACGAACTCCTTCCCTGTCTCCCCAGCTGCCCAGAGTCGCATCTGTTTGGACTTCAGGAGCAGCAGCGAGGGGAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR TCA 90 bp | TGTAGTGTCCTGTGCTTGGCAAGTGCCCTTTTAATGCTTCCAGAGTaGAGGGCTGCAGGAGGCCCTCCCTCCTCTCCCTGGATTTCAGAA | + |
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Preference number: 1 (lower is better) Translates to: CSVLCLASALLMLPE*RAAGGPPSSPWISE Trigger: TTCTGAAATCCAGGGAGAGGAGGGAGGGCCTCCTGCAGCCCTTCACTCTGGAAGCATTAAAAGGGCACTTGCCAAGCACAGGACACTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR TCA 90 bp | AGCAAACCTTCATTGCCTTGTGATGGCTTGAATCCCACTCCCTCCTaGCAGCCTTTTCTGCCACCCCAACCCAAAGCACGTGCTCTCAGC | + |
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Preference number: 1 (lower is better) Translates to: SKPSLPCDGLNPTPS*QPFLPPQPKARALS Trigger: GCTGAGAGCACGTGCTTTGGGTTGGGGTGGCAGAAAAGGCTGTCAGGAGGGAGTGGGATTCAAGCCATCACAAGGCAATGAAGGTTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR TCA 90 bp | TTGGCTTTTGCTGCTCTTACCTTGAGGCCTCTCCTGTGCCATCTCTaGAGTGGTGAGCCCAGCAAACCTTCATTGCCTTGTGATGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: LAFAALTLRPLLCHL*SGEPSKPSLPCDGL Trigger: CAAGCCATCACAAGGCAATGAAGGTTTGCTGGGCTCACCACTTCAGAGATGGCACAGGAGAGGCCTCAAGGTAAGAGCAGCAAAAGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR TCA 90 bp | ACAAGCAGAGCTATGAAGTCAGGTTGGCTTTTGCTGCTCTTACCTTaGGGCCTCTCCTGTGCCATCTCTGAAGTGGTGAGCCCAGCAAAC | + |
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Preference number: 1 (lower is better) Translates to: TSRAMKSGWLLLLLP*GLSCAISEVVSPAN Trigger: GTTTGCTGGGCTCACCACTTCAGAGATGGCACAGGAGAGGCCTCAAGGTAAGAGCAGCAAAAGCCAACCTGACTTCATAGCTCTGCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR TCA 90 bp | TTTCAAGGGGGATACAGTCCAAGGCAGAGTGGCAGAGTCAGCCCCTaGCTGTGGTGGCAGAAGCTTGTAATATCTGAGGAACACAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: FQGGYSPRQSGRVSP*LWWQKLVISEEHKQ Trigger: CTGCTTGTGTTCCTCAGATATTACAAGCTTCTGCCACCACAGTCAGGGGCTGACTCTGCCACTCTGCCTTGGACTGTATCCCCCTTGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR CCA 90 bp | CCCTGTGCGGGGCGAGGTCCTGTGCCTTGTTGGCCTTTGTCTCTTTaGGTACGGACAGCCAGCTTAGTGGACTTAATTTTTGATGTTAGA | + |
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Preference number: 1 (lower is better) Translates to: PCAGRGPVPCWPLSL*VRTASLVDLIFDVR Trigger: TCTAACATCAAAAATTAAGTCCACTAAGCTGGCTGTCCGTACCCAAAGAGACAAAGGCCAACAAGGCACAGGACCTCGCCCCGCACAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR GCA 90 bp | AGTGCTGGGATTAAAGGCGTGCACCAACTTGCCCAGCACGGCCTTTaGCTTCTTTTTGGCCAACAGAACACAAGGGTCAAGGTTTCTAAG | + |
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Preference number: 1 (lower is better) Translates to: SAGIKGVHQLAQHGL*LLFGQQNTRVKVSK Trigger: CTTAGAAACCTTGACCCTTGTGTTCTGTTGGCCAAAAAGAAGGCAAAGGCCGTGCTGGGCAAGTTGGTGCACGCCTTTAATCCCAGCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR GCA 90 bp | GTAGCCCTGGAGATTCATAAAGGGAAACACCCAGTAGAACAGCACTaGTTGAGGCTCACATGGGTACCAAATCCCTCTATTTCCTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: VALEIHKGKHPVEQH*LRLTWVPNPSISWL Trigger: AAGCCAGGAAATAGAGGGATTTGGTACCCATGTGAGCCTCAAGCAGTGCTGTTCTACTGGGTGTTTCCCTTTATGAATCTCCAGGGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR CCA 90 bp | CATAAAGGGAAACACCCAGTAGAACAGCACTGCTTGAGGCTCACATaGGTACCAAATCCCTCTATTTCCTGGCTTACTGTCCTGATCAGT | + |
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Preference number: 1 (lower is better) Translates to: HKGKHPVEQHCLRLT*VPNPSISWLTVLIS Trigger: ACTGATCAGGACAGTAAGCCAGGAAATAGAGGGATTTGGTACCCATGTGAGCCTCAAGCAGTGCTGTTCTACTGGGTGTTTCCCTTTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR TCA 90 bp | AAATACAAATATGATGGCTACAGCTCAAGCAGCTATCTTGCGATGTaGGGCCAAGTTGCCAAAAAGAAAGACATAAAAGCCCACCACCCC | + |
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Preference number: 1 (lower is better) Translates to: KYKYDGYSSSSYLAM*GQVAKKKDIKAHHP Trigger: GGGGTGGTGGGCTTTTATGTCTTTCTTTTTGGCAACTTGGCCTCACATCGCAAGATAGCTGCTTGAGCTGTAGCCATCATATTTGTATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR CAA 90 bp | CTGATCAGTGGTCTAGACAGTGAGGCCCAGGTCCCCTTCACTGGGTaGAACACTAGAACCTCCAGGAGAGGCAGGCCCATCTCAGACAGG | + |
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Preference number: 2 (lower is better) Translates to: LISGLDSEAQVPFTG*NTRTSRRGRPISDR Trigger: CCTGTCTGAGATGGGCCTGCCTCTCCTGGAGGTTCTAGTGTTCAACCCAGTGAAGGGGACCTGGGCCTCACTGTCTAGACCACTGATCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR-3UTR TCA 90 bp | TGGATGTACACTTGTGAACGAGCCCCAGCACGGTTCTGCAGGCTCCGGGAACCCGGTTCAAAGCAAGGATaGCCCTGGATGGCAAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: WMYTCERAPARFCRLREPGSKQG*PWMAKS Trigger: GGACTTTGCCATCCAGGGTCATCCTTGCTTTGAACC...GGGTTCCCGGAGCCTGCAGAACCGTGCTGGGGCTCGTTCACAAGTGTACATCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
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| 3UTR-3UTR CCA 90 bp | GTGAACGAGCCCCAGCACGGTTCTGCAGGCTCCGGGAACCCGGGCTCTCAGAAGAAGGATGACCCTGGATaGCAAAGTCCTGATTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: VNEPQHGSAGSGNPGSQKKDDPG*QSPDFQ Trigger: CTGAAAATCAGGACTTTGCCATCCAGGGTCATCCTT...CTTCTGAGAGCCCGGGTTCCCGGAGCCTGCAGAACCGTGCTGGGGCTCGTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
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| 3UTR CAA 90 bp | CAGCTGAGAGTCTGGGCAGGACTTACAATCTTCATGGGTTGTCTTTaGCCTCAGGAACCCCTGTGCGGGGCGAGGTCCTGTGCCTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: QLRVWAGLTIFMGCL*PQEPLCGARSCALL Trigger: CAACAAGGCACAGGACCTCGCCCCGCACAGGGGTTCCTGAGGCAAAAGACAACCCATGAAGATTGTAAGTCCTGCCCAGACTCTCAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR-3UTR TCA 90 bp | AGTGAGGCCCAGGTCCCCTTCACTGGGTTGAACACTAGAACCTCCAGGAGAGGCCTGAGTGTGGCCTTCTaGTGCTGGCACTCAAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: SEAQVPFTGLNTRTSRRGLSVAF*CWHSSL Trigger: AAGACTTGAGTGCCAGCATCAGAAGGCCACACTCAG...GCCTCTCCTGGAGGTTCTAGTGTTCAACCCAGTGAAGGGGACCTGGGCCTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR-3UTR CCA 90 bp | CTGATTTTGGCTTTCAAGGGGGATACAGTCCAAGGCAGAGTGGCAGAGTCAGCCGCGACTCTGGGCAGCTaGGGAGACAGGGAAGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: LILAFKGDTVQGRVAESAATLGS*GDREGV Trigger: AACTCCTTCCCTGTCTCCCCAGCTGCCCAGAGTCGC...GGCTGACTCTGCCACTCTGCCTTGGACTGTATCCCCCTTGAAAGCCAAAATCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR-3UTR TCA 90 bp | CTGATTTTGGCTTTCAAGGGGGATACAGTCCAAGGCAGAGTGGCAGAGTCAGCCGGCAGAAATCTCCACTaGGGGGACAGGGACATGCTG | + |
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Preference number: 2 (lower is better) Translates to: LILAFKGDTVQGRVAESAGRNLH*GDRDML Trigger: CAGCATGTCCCTGTCCCCTCAGTGGAGATTTCTGCC...GGCTGACTCTGCCACTCTGCCTTGGACTGTATCCCCCTTGAAAGCCAAAATCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR CAA 90 bp | CTCAGGAACCCCTGTGCGGGGCGAGGTCCTGTGCCTTGTTGGCCTTaGTCTCTTTGGGTACGGACAGCCAGCTTAGTGGACTTAATTTTT | + |
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Preference number: 2 (lower is better) Translates to: LRNPCAGRGPVPCWP*SLWVRTASLVDLIF Trigger: AAAAATTAAGTCCACTAAGCTGGCTGTCCGTACCCAAAGAGACAAAGGCCAACAAGGCACAGGACCTCGCCCCGCACAGGGGTTCCTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR-3UTR CCA 90 bp | CTGATTTTGGCTTTCAAGGGGGATACAGTCCAAGGCAGAGTGGCAGAGTCAGCCCCCTCTTGTGCTTGCTaGTGTGAGGCTGGCTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: LILAFKGDTVQGRVAESAPSCAC*CEAGSL Trigger: CAAAGAGCCAGCCTCACACCAGCAAGCACAAGAGGG...GGCTGACTCTGCCACTCTGCCTTGGACTGTATCCCCCTTGAAAGCCAAAATCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR CAA 90 bp | CCACCACCCCAGGCTTCTGGCTTTCCCAGCTCCAGGCTGGTAACCTaGTCAGCCTTAGAGGTCTCACTACACAAACTAGTTGTGATCTTT | + |
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Preference number: 2 (lower is better) Translates to: PPPQASGFPSSRLVT*SALEVSLHKLVVIF Trigger: AAAGATCACAACTAGTTTGTGTAGTGAGACCTCTAAGGCTGACAAGGTTACCAGCCTGGAGCTGGGAAAGCCAGAAGCCTGGGGTGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR CAA 90 bp | GCCCTGGAGATTCATAAAGGGAAACACCCAGTAGAACAGCACTGCTaGAGGCTCACATGGGTACCAAATCCCTCTATTTCCTGGCTTACT | + |
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Preference number: 2 (lower is better) Translates to: ALEIHKGKHPVEQHC*RLTWVPNPSISWLT Trigger: AGTAAGCCAGGAAATAGAGGGATTTGGTACCCATGTGAGCCTCAAGCAGTGCTGTTCTACTGGGTGTTTCCCTTTATGAATCTCCAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR CAA 90 bp | TTAAAGGCGTGCACCAACTTGCCCAGCACGGCCTTTGCCTTCTTTTaGGCCAACAGAACACAAGGGTCAAGGTTTCTAAGAAAGATCATG | + |
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Preference number: 2 (lower is better) Translates to: LKACTNLPSTAFAFF*ANRTQGSRFLRKIM Trigger: CATGATCTTTCTTAGAAACCTTGACCCTTGTGTTCTGTTGGCCAAAAAGAAGGCAAAGGCCGTGCTGGGCAAGTTGGTGCACGCCTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR CAA 90 bp | AAGCTTGTAATATCTGAGGAACACAAGCAGAGCTATGAAGTCAGGTaGGCTTTTGCTGCTCTTACCTTGAGGCCTCTCCTGTGCCATCTC | + |
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Preference number: 2 (lower is better) Translates to: KLVISEEHKQSYEVR*AFAALTLRPLLCHL Trigger: GAGATGGCACAGGAGAGGCCTCAAGGTAAGAGCAGCAAAAGCCAACCTGACTTCATAGCTCTGCTTGTGTTCCTCAGATATTACAAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR-3UTR CCA 90 bp | TTGTCAGCCTTAGAGGTCTCACTACACAAACTAGTTGTGATCTTTTGCTGTTGTAACCCTCGGTGTAGCTaGGTTACAGGGACAGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: LSALEVSLHKLVVIFCCCNPRCS*VTGTAK Trigger: CTTGGCTGTCCCTGTAACCCAGCTACACCGAGGGTT...ACAACAGCAAAAGATCACAACTAGTTTGTGTAGTGAGACCTCTAAGGCTGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR-3UTR CCA 90 bp | ATATCTGAGGAACACAAGCAGAGCTATGAAGTCAGGTTGGCTTTTGCTGCTCTTTCAGCCTTTGGTGCATaGGATCCAAGCCAGGACAAA | + |
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Preference number: 2 (lower is better) Translates to: ISEEHKQSYEVRLAFAALSAFGA*DPSQDK Trigger: TTTGTCCTGGCTTGGATCCCATGCACCAAAGGCTGA...AAGAGCAGCAAAAGCCAACCTGACTTCATAGCTCTGCTTGTGTTCCTCAGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR-3UTR CCA 90 bp | TTGTCAGCCTTAGAGGTCTCACTACACAAACTAGTTGTGATCTTTTGCTGTTGTAGCTGGCCACAGCTCTaGATTCTACATTCTGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: LSALEVSLHKLVVIFCCCSWPQL*ILHSGL Trigger: AAGACCAGAATGTAGAATCCAGAGCTGTGGCCAGCT...ACAACAGCAAAAGATCACAACTAGTTTGTGTAGTGAGACCTCTAAGGCTGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR GCA 72 bp | GTCTGCAGCACCCACCGGCACCGGGACACTGTCCATTaGTGTCCCCGCCCAGGGCCTGCCGGGAGCCTTTTA | + |
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Preference number: 3 (lower is better) Translates to: VCSTHRHRDTVH*CPRPGPAGSLL Trigger: TAAAAGGCTCCCGGCAGGCCCTGGGCGGGGACAGCAATGGACAGTGTCCCGGTGCCGGTGGGTGCTGCAGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR GCA 72 bp | CCGGGACACTGTCCATTGCTGTCCCCGCCCAGGGCCTaGCGGGAGCCTTTTAACCCTCTGCTGTCGGATGCT | + |
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Preference number: 3 (lower is better) Translates to: PGHCPLLSPPRA*REPFNPLLSDA Trigger: AGCATCCGACAGCAGAGGGTTAAAAGGCTCCCGGCAGGCCCTGGGCGGGGACAGCAATGGACAGTGTCCCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR TCA 72 bp | GTGTGCCACCATGGCAGCTCCCCTCGCTGCTGCTCCTaGAGTCCAAACAGATGCGACTCTGGGCAGCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: VCHHGSSPRCCS*SPNRCDSGQLG Trigger: CCCCAGCTGCCCAGAGTCGCATCTGTTTGGACTTCAGGAGCAGCAGCGAGGGGAGCTGCCATGGTGGCACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR TCA 72 bp | GAGGCCCTCCCTCCTCTCCCTGGATTTCAGAATTCCTaGTCTGCCTGCAGTCACCCTCACCGCCACCAGGGG | + |
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Preference number: 3 (lower is better) Translates to: EALPPLPGFQNS*SACSHPHRHQG Trigger: CCCCTGGTGGCGGTGAGGGTGACTGCAGGCAGATCAGGAATTCTGAAATCCAGGGAGAGGAGGGAGGGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR GCA 72 bp | CCTCCCTCCTCTCCCTGGATTTCAGAATTCCTGATCTaGCTGCAGTCACCCTCACCGCCACCAGGGGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: PPSSPWISEFLI*LQSPSPPPGGL Trigger: GAGGCCCCCTGGTGGCGGTGAGGGTGACTGCAGGCAGATCAGGAATTCTGAAATCCAGGGAGAGGAGGGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR GCA 72 bp | TTTGCCTCAGGAACCCCTGTGCGGGGCGAGGTCCTGTaGCTTGTTGGCCTTTGTCTCTTTGGGTACGGACAG | + |
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Preference number: 3 (lower is better) Translates to: FASGTPVRGEVL*LVGLCLFGYGQ Trigger: CTGTCCGTACCCAAAGAGACAAAGGCCAACAAGGCACAGGACCTCGCCCCGCACAGGGGTTCCTGAGGCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR CCA 72 bp | AGGAACCCCTGTGCGGGGCGAGGTCCTGTGCCTTGTTaGCCTTTGTCTCTTTGGGTACGGACAGCCAGCTTA | + |
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Preference number: 3 (lower is better) Translates to: RNPCAGRGPVPC*PLSLWVRTASL Trigger: TAAGCTGGCTGTCCGTACCCAAAGAGACAAAGGCCAACAAGGCACAGGACCTCGCCCCGCACAGGGGTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR TCA 72 bp | CACACTTCTCTTCAGTCCCAGGTGGATGTACACTTGTaGACGAGCCCCAGCACGGTTCTGCAGGCTCCGGGA | + |
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Preference number: 3 (lower is better) Translates to: HTSLQSQVDVHL*TSPSTVLQAPG Trigger: TCCCGGAGCCTGCAGAACCGTGCTGGGGCTCGTTCACAAGTGTACATCCACCTGGGACTGAAGAGAAGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
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| 3UTR TCA 72 bp | CACCGCCACCAGGGGGCCTCTTTAAAAATAAAGGCCTaGCCCTGTCCTCATTCAGCCGGGCCAGAGCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: HRHQGASLKIKA*PCPHSAGPELP Trigger: AGGAAGCTCTGGCCCGGCTGAATGAGGACAGGGTCAGGCCTTTATTTTTAAAGAGGCCCCCTGGTGGCGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR CCA 72 bp | CCCCTGACCATTCTCACCACCCCAGAGGTCAGCCTTTaGTGCATGGGATCCAAGCCAGGACAAAGCACAAGC | + |
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Preference number: 3 (lower is better) Translates to: PLTILTTPEVSL*CMGSKPGQSTS Trigger: GCTTGTGCTTTGTCCTGGCTTGGATCCCATGCACCAAAGGCTGACCTCTGGGGTGGTGAGAATGGTCAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR CCA 72 bp | TGTTGTGTGGACCTGAACCTGCCACACAGCCCAAGCTaGCCTAGAACTTGGGGTCTCCTCTCTCAGCCCCTT | + |
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Preference number: 3 (lower is better) Translates to: CCVDLNLPHSPS*PRTWGLLSQPL Trigger: AAGGGGCTGAGAGAGGAGACCCCAAGTTCTAGGCCAGCTTGGGCTGTGTGGCAGGTTCAGGTCCACACAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR GCA 72 bp | GGCAAGTGCCCTTTTAATGCTTCCAGAGTGAAGGGCTaGAGGAGGCCCTCCCTCCTCTCCCTGGATTTCAGA | + |
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Preference number: 3 (lower is better) Translates to: GKCPFNASRVKG*RRPSLLSLDFR Trigger: TCTGAAATCCAGGGAGAGGAGGGAGGGCCTCCTGCAGCCCTTCACTCTGGAAGCATTAAAAGGGCACTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR CCA 72 bp | CTCCGGGAACCCGGGCTCTCAGAAGTCCGTTCCTTCTaGGTTCAAAGCAAGGATGACCCTGGATGGCAAAGT | + |
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Preference number: 3 (lower is better) Translates to: LREPGLSEVRSF*VQSKDDPGWQS Trigger: ACTTTGCCATCCAGGGTCATCCTTGCTTTGAACCCAGAAGGAACGGACTTCTGAGAGCCCGGGTTCCCGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
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| 3UTR CCA 72 bp | TCGCTGCTGCTCCTGAAGTCCAAACAGATGCGACTCTaGGCAGCTGGGGAGACAGGGAAGGAGTTCGTGATT | + |
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Preference number: 3 (lower is better) Translates to: SLLLLKSKQMRL*AAGETGKEFVI Trigger: AATCACGAACTCCTTCCCTGTCTCCCCAGCTGCCCAGAGTCGCATCTGTTTGGACTTCAGGAGCAGCAGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR GCA 72 bp | CTGACCATTCTCACCACCCCAGAGGTCAGCCTTTGGTaGATGGGATCCAAGCCAGGACAAAGCACAAGCACA | + |
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Preference number: 3 (lower is better) Translates to: LTILTTPEVSLW*MGSKPGQSTST Trigger: TGTGCTTGTGCTTTGTCCTGGCTTGGATCCCATGCACCAAAGGCTGACCTCTGGGGTGGTGAGAATGGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
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| 3UTR GCA 72 bp | AGCGACATGTGTGAACACAGCCTAGCAACCCCATCATaGCCTCTTGTGCTTGCTGGTGTGAGGCTGGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SDMCEHSLATPS*PLVLAGVRLAL Trigger: AAGAGCCAGCCTCACACCAGCAAGCACAAGAGGGCATGATGGGGTTGCTAGGCTGTGTTCACACATGTCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR GCA 72 bp | CTGACAGCCTTTTCTGCCACCCCAACCCAAAGCACGTaGTCTCAGCTGAGAGTCTGGGCAGGACTTACAATC | + |
|
Preference number: 3 (lower is better) Translates to: LTAFSATPTQST*SQLRVWAGLTI Trigger: GATTGTAAGTCCTGCCCAGACTCTCAGCTGAGAGCACGTGCTTTGGGTTGGGGTGGCAGAAAAGGCTGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR CCA 72 bp | CCATTCTCACCACCCCAGAGGTCAGCCTTTGGTGCATaGGATCCAAGCCAGGACAAAGCACAAGCACAGACT | + |
|
Preference number: 3 (lower is better) Translates to: PFSPPQRSAFGA*DPSQDKAQAQT Trigger: AGTCTGTGCTTGTGCTTTGTCCTGGCTTGGATCCCATGCACCAAAGGCTGACCTCTGGGGTGGTGAGAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGATTTTGGCTTTCAAGGGGGATACAGTCCAAGGCAGAGTGGCAGAGTCAGCCGCGAGGTCCTGTGCCTaGTTGGCCTTTGTCTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LILAFKGDTVQGRVAESAARSCA*LAFVSL Trigger: CAAAGAGACAAAGGCCAACAAGGCACAGGACCTCGC...GGCTGACTCTGCCACTCTGCCTTGGACTGTATCCCCCTTGAAAGCCAAAATCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR TCA 72 bp | CCGGAGATAAGCTTTCCGTCCCTGAGTGTGGCCTTCTaGTGCTGGCACTCAAGTCTTCAGCTATCTCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: PEISFPSLSVAF*CWHSSLQLSPD Trigger: GTCAGGAGATAGCTGAAGACTTGAGTGCCAGCATCAGAAGGCCACACTCAGGGACGGAAAGCTTATCTCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR TCA 72 bp | TCATTGCCTTGTGATGGCTTGAATCCCACTCCCTCCTaGCAGCCTTTTCTGCCACCCCAACCCAAAGCACGT | + |
|
Preference number: 3 (lower is better) Translates to: SLPCDGLNPTPS*QPFLPPQPKAR Trigger: ACGTGCTTTGGGTTGGGGTGGCAGAAAAGGCTGTCAGGAGGGAGTGGGATTCAAGCCATCACAAGGCAATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR TCA 72 bp | GTGAGCCCAGCAAACCTTCATTGCCTTGTGATGGCTTaGATCCCACTCCCTCCTGACAGCCTTTTCTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: VSPANLHCLVMA*IPLPPDSLFCH Trigger: GTGGCAGAAAAGGCTGTCAGGAGGGAGTGGGATTCAAGCCATCACAAGGCAATGAAGGTTTGCTGGGCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR TCA 72 bp | GCTATGAAGTCAGGTTGGCTTTTGCTGCTCTTACCTTaGGGCCTCTCCTGTGCCATCTCTGAAGTGGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: AMKSGWLLLLLP*GLSCAISEVVS Trigger: GCTCACCACTTCAGAGATGGCACAGGAGAGGCCTCAAGGTAAGAGCAGCAAAAGCCAACCTGACTTCATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR CCA 72 bp | ATGGGATCCAAGCCAGGACAAAGCACAAGCACAGACTaGAGGAGTTTCACACTTCTCTTCAGTCCCAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: MGSKPGQSTSTD*RSFTLLFSPRW Trigger: CCACCTGGGACTGAAGAGAAGTGTGAAACTCCTCCAGTCTGTGCTTGTGCTTTGTCCTGGCTTGGATCCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR CCA 72 bp | CCACCAAAGCTGGCCACAGCTCTGGATTCTACATTCTaGTCTTCAGCTAGGATGAGCGGGCCCAGATATGAT | + |
|
Preference number: 3 (lower is better) Translates to: PPKLATALDSTF*SSARMSGPRYD Trigger: ATCATATCTGGGCCCGCTCATCCTAGCTGAAGACCAGAATGTAGAATCCAGAGCTGTGGCCAGCTTTGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGCTTCTGGCTTTCCCAGCTCCAGGCTGGTAACCTTGTCAGCCTTAGAGGTACTAGTTGTGATCTTTaGCTGTTGTGTGGACCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: PGFWLSQLQAGNLVSLRGTSCDL*LLCGPE Trigger: TTCAGGTCCACACAACAGCAAAAGATCACAACTAGT...ACCTCTAAGGCTGACAAGGTTACCAGCCTGGAGCTGGGAAAGCCAGAAGCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR GCA 72 bp | ATTAAAGGCGTGCACCAACTTGCCCAGCACGGCCTTTaGCTTCTTTTTGGCCAACAGAACACAAGGGTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: IKGVHQLAQHGL*LLFGQQNTRVK Trigger: CTTGACCCTTGTGTTCTGTTGGCCAAAAAGAAGGCAAAGGCCGTGCTGGGCAAGTTGGTGCACGCCTTTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR CCA 72 bp | GGGCGAGGTCCTGTGCCTTGTTGGCCTTTGTCTCTTTaGGTACGGACAGCCAGCTTAGTGGACTTAATTTTT | + |
|
Preference number: 3 (lower is better) Translates to: GRGPVPCWPLSL*VRTASLVDLIF Trigger: AAAAATTAAGTCCACTAAGCTGGCTGTCCGTACCCAAAGAGACAAAGGCCAACAAGGCACAGGACCTCGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGATTTTGGCTTTCAAGGGGGATACAGTCCAAGGCAGAGTGGCAGAGTCAGCCCCTGTCTCAGCCTCTTaGGTGTGGTTTTACCATATA | + |
|
Preference number: 3 (lower is better) Translates to: LILAFKGDTVQGRVAESAPVSAS*VWFYHI Trigger: TATATGGTAAAACCACACCAAAGAGGCTGAGACAGG...GGCTGACTCTGCCACTCTGCCTTGGACTGTATCCCCCTTGAAAGCCAAAATCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR TCA 72 bp | CCCTTCTTAGAGTCCCTGCCACATACTCATTGCACTTaGTCTGTCTTGCTCTCCACTTGGTCTGTAGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: PFLESLPHTHCT*SVLLSTWSVVS Trigger: GGACACTACAGACCAAGTGGAGAGCAAGACAGATCAAGTGCAATGAGTATGTGGCAGGGACTCTAAGAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR CCA 72 bp | TTGAGGCTCACATGGGTACCAAATCCCTCTATTTCCTaGCTTACTGTCCTGATCAGTGGTCTAGACAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LRLTWVPNPSIS*LTVLISGLDSE Trigger: CTCACTGTCTAGACCACTGATCAGGACAGTAAGCCAGGAAATAGAGGGATTTGGTACCCATGTGAGCCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR CCA 72 bp | GTAGGGTGTGTTTGTGGTCTCCTATGTATGTGTGTATaGAGGGTCTCCTGTGTCCTCTTGTGTACACTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: VGCVCGLLCMCV*RVSCVLLCTLE Trigger: TTCCAGTGTACACAAGAGGACACAGGAGACCCTCCATACACACATACATAGGAGACCACAAACACACCCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR CCA 72 bp | CCTCTTTGGTGTGGTTTTACCATATACCACCAAAGCTaGCCACAGCTCTGGATTCTACATTCTGGTCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: PLWCGFTIYHQS*PQLWILHSGLQ Trigger: CTGAAGACCAGAATGTAGAATCCAGAGCTGTGGCCAGCTTTGGTGGTATATGGTAAAACCACACCAAAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR CCA 72 bp | GATGACCTTGAATTGAGTCTCCTGTCTCAGCCTCTTTaGTGTGGTTTTACCATATACCACCAAAGCTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: DDLELSLLSQPL*CGFTIYHQSWP Trigger: TGGCCAGCTTTGGTGGTATATGGTAAAACCACACCAAAGAGGCTGAGACAGGAGACTCAATTCAAGGTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR CCA 72 bp | TTCGTGATTAGAGAAACAGTGTGTAGGGTGTGTTTGTaGTCTCCTATGTATGTGTGTATGGAGGGTCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: FVIRETVCRVCL*SPMYVCMEGLL Trigger: CAGGAGACCCTCCATACACACATACATAGGAGACCACAAACACACCCTACACACTGTTTCTCTAATCACGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR TCA 72 bp | CATGTCCTTTTGCATTCCCTCCTCTTCTCTGCTAGCTaGAATACAAATATGATGGCTACAGCTCAAGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: HVLLHSLLFSAS*NTNMMATAQAA Trigger: AGCTGCTTGAGCTGTAGCCATCATATTTGTATTTCAGCTAGCAGAGAAGAGGAGGGAATGCAAAAGGACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| CDS-3UTR GCA 90 bp | AGCCCCAGCACGGTTCTGCAGGCTCCGGGAACCCGGGCTCTCAGAAGTCCGTTCGGCGGCGCTGGGTCTTaGTGGTACGTGTGGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPSTVLQAPGTRALRSPFGGAGS*WYVWHL Trigger: CAAGTGCCACACGTACCAGCAAGACCCAGCGCCGCC...GAACGGACTTCTGAGAGCCCGGGTTCCCGGAGCCTGCAGAACCGTGCTGGGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR TCA 90 bp | AACGAGCCCCAGCACGGTTCTGCAGGCTCCGGGAACCCGGGCTCTCAGAAGTCCAGGGAGGAGATGCGCTaGGAGAGCAGGGGATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NEPQHGSAGSGNPGSQKSREEMR*ESRGSL Trigger: CAAAGATCCCCTGCTCTCTCAGCGCATCTCCTCCCT...GGACTTCTGAGAGCCCGGGTTCCCGGAGCCTGCAGAACCGTGCTGGGGCTCGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR TCA 90 bp | ACGAGCCCCAGCACGGTTCTGCAGGCTCCGGGAACCCGGGCTCTCAGAAGTCCGGAGGGTGTTTCCTCTTaGCCTTCTTCCGACTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TSPSTVLQAPGTRALRSPEGVSS*PSSDCV Trigger: CACACAGTCGGAAGAAGGTCAAGAGGAAACACCCTC...CGGACTTCTGAGAGCCCGGGTTCCCGGAGCCTGCAGAACCGTGCTGGGGCTCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR GCA 90 bp | GAACGAGCCCCAGCACGGTTCTGCAGGCTCCGGGAACCCGGGCTCTCAGAAGTCCCATCCTGGTCCCCTTaGCAGTGCTTCCTCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ERAPARFCRLREPGLSEVPSWSP*QCFLSF Trigger: GAAAGAGAGGAAGCACTGGCAAGGGGACCAGGATGG...GACTTCTGAGAGCCCGGGTTCCCGGAGCCTGCAGAACCGTGCTGGGGCTCGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041164.4 |
||
| CDS-3UTR CCA 90 bp | GTGAACGAGCCCCAGCACGGTTCTGCAGGCTCCGGGAACCCGGGCTCTCAGAAGAACCCTCGGTGTAGCTaGGTTACAGGGACAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VNEPQHGSAGSGNPGSQKNPRCS*VTGTAK Trigger: CTTGGCTGTCCCTGTAACCCAGCTACACCGAGGGTT...CTTCTGAGAGCCCGGGTTCCCGGAGCCTGCAGAACCGTGCTGGGGCTCGTTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041164.4 |
||
| 3UTR CAA 72 bp | CCTCAGGAACCCCTGTGCGGGGCGAGGTCCTGTGCCTaGTTGGCCTTTGTCTCTTTGGGTACGGACAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PQEPLCGARSCA*LAFVSLGTDSQ Trigger: CTGGCTGTCCGTACCCAAAGAGACAAAGGCCAACAAGGCACAGGACCTCGCCCCGCACAGGGGTTCCTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| CDS-3UTR CCA 90 bp | CTTGTGAACGAGCCCCAGCACGGTTCTGCAGGCTCCGGGAACCCGGGCTCTCAGAGAGCAGGGGATCTTTaGACTTCCTGGGCAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVNEPQHGSAGSGNPGSQRAGDL*TSWARL Trigger: AAGCCTTGCCCAGGAAGTCCAAAGATCCCCTGCTCT...CTGAGAGCCCGGGTTCCCGGAGCCTGCAGAACCGTGCTGGGGCTCGTTCACAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| 3UTR CAA 72 bp | CCCTGTGCGGGGCGAGGTCCTGTGCCTTGTTGGCCTTaGTCTCTTTGGGTACGGACAGCCAGCTTAGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PCAGRGPVPCWP*SLWVRTASLVD Trigger: GTCCACTAAGCTGGCTGTCCGTACCCAAAGAGACAAAGGCCAACAAGGCACAGGACCTCGCCCCGCACAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| CDS-3UTR TCA 90 bp | GCAGGCTCCGGGAACCCGGGCTCTCAGAAGTCCGTTCCTTCTGGGTTCAAAGCAAGGGAGGAGATGCGCTaGGAGAGCAGGGGATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AGSGNPGSQKSVPSGFKAREEMR*ESRGSL Trigger: CAAAGATCCCCTGCTCTCTCAGCGCATCTCCTCCCT...TGCTTTGAACCCAGAAGGAACGGACTTCTGAGAGCCCGGGTTCCCGGAGCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR GCA 90 bp | ATGTACACTTGTGAACGAGCCCCAGCACGGTTCTGCAGGCTCCGGGAACCCGGGTGGTCCCCTTGCCAGTaGTTCCTCTCTTTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MYTCERAPARFCRLREPGWSPCQ*FLSFCQ Trigger: CTGGCAGAAAGAGAGGAAGCACTGGCAAGGGGACCA...CCCGGGTTCCCGGAGCCTGCAGAACCGTGCTGGGGCTCGTTCACAAGTGTACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041164.4 |
||
| CDS-3UTR GCA 90 bp | TGTACACTTGTGAACGAGCCCCAGCACGGTTCTGCAGGCTCCGGGAACCCGGGCATCTGCCTCCTCCAGTaGTTCCTCTCTTTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CTLVNEPQHGSAGSGNPGICLLQ*FLSFCQ Trigger: CTGGCAGAAAGAGAGGAAGCACTGGAGGAGGCAGAT...GCCCGGGTTCCCGGAGCCTGCAGAACCGTGCTGGGGCTCGTTCACAAGTGTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| CDS-3UTR CCA 90 bp | CTGCAGGCTCCGGGAACCCGGGCTCTCAGAAGTCCGTTCCTTCTGGGTTCAAAGGACATCTCCTCTTCCTaGGACCCATCCTGGTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQAPGTRALRSPFLLGSKDISSS*DPSWSP Trigger: AGGGGACCAGGATGGGTCCCAGGAAGAGGAGATGTC...CTTTGAACCCAGAAGGAACGGACTTCTGAGAGCCCGGGTTCCCGGAGCCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTTCTGGCTTTCCCAGCTCCAGGCTGGTAACCTTGTCAGCCTTAGAGGTTCCTGGGACCCATCCTaGTCCCCTTGCTCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGFWLSQLQAGNLVSLRGSWDPS*SPCSGR Trigger: CCTGCCTGAGCAAGGGGACCAGGATGGGTCCCAGGA...ACCTCTAAGGCTGACAAGGTTACCAGCCTGGAGCTGGGAAAGCCAGAAGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR CAA 72 bp | GGTCTAGACAGTGAGGCCCAGGTCCCCTTCACTGGGTaGAACACTAGAACCTCCAGGAGAGGCAGGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: GLDSEAQVPFTG*NTRTSRRGRPI Trigger: GATGGGCCTGCCTCTCCTGGAGGTTCTAGTGTTCAACCCAGTGAAGGGGACCTGGGCCTCACTGTCTAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| CDS-3UTR GCA 90 bp | GAACGAGCCCCAGCACGGTTCTGCAGGCTCCGGGAACCCGGGCTCTCAGAAGTCTGCTTCCTCTCTTTCTaGCAGCATCTTCAGGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: ERAPARFCRLREPGLSEVCFLSF*QHLQVL Trigger: GAGTACCTGAAGATGCTGGCAGAAAGAGAGGAAGCA...GACTTCTGAGAGCCCGGGTTCCCGGAGCCTGCAGAACCGTGCTGGGGCTCGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR GCA 90 bp | GGGCTCTCAGAAGTCCGTTCCTTCTGGGTTCAAAGCAAGGATGACCCTGGATGGGGCGGCGCTGGGTCTTaGTGGTACGTGTGGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLSEVRSFWVQSKDDPGWGGAGS*WYVWHL Trigger: CAAGTGCCACACGTACCAGCAAGACCCAGCGCCGCC...CCATCCAGGGTCATCCTTGCTTTGAACCCAGAAGGAACGGACTTCTGAGAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR GCA 90 bp | CCCGGGCTCTCAGAAGTCCGTTCCTTCTGGGTTCAAAGCAAGGATGACCCTGGACCGCTCCAGCTCATCTaGCTCCTCCAGTGCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGLSEVRSFWVQSKDDPGPLQLI*LLQCFL Trigger: GAGGAAGCACTGGAGGAGGCAGATGAGCTGGAGCGG...TCCAGGGTCATCCTTGCTTTGAACCCAGAAGGAACGGACTTCTGAGAGCCCGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| CDS-3UTR CCA 90 bp | ACGAGCCCCAGCACGGTTCTGCAGGCTCCGGGAACCCGGGCTCTCAGAAGTCCGGCTTTATCTCTTCAATaGCTGCCTTCTTGCGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TSPSTVLQAPGTRALRSPALSLQ*LPSCAL Trigger: TAGAGCGCAAGAAGGCAGCCATTGAAGAGATAAAGC...CGGACTTCTGAGAGCCCGGGTTCCCGGAGCCTGCAGAACCGTGCTGGGGCTCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR CCA 90 bp | AGTGAGGCCCAGGTCCCCTTCACTGGGTTGAACACTAGAACCTCCAGGAGAGGCGACATCTCCTCTTCCTaGGACCCATCCTGGTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SEAQVPFTGLNTRTSRRGDISSS*DPSWSP Trigger: AGGGGACCAGGATGGGTCCCAGGAAGAGGAGATGTC...GCCTCTCCTGGAGGTTCTAGTGTTCAACCCAGTGAAGGGGACCTGGGCCTCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| CDS-3UTR TCA 90 bp | GCAGGCTCCGGGAACCCGGGCTCTCAGAAGTCCGTTCCTTCTGGGTTCAAAGCAGTCACAGTGACTGTGTaGTTGGGGTGGTCATACTGC | + |
|
Preference number: 4 (lower is better) Translates to: AGSGNPGSQKSVPSGFKAVTVTV*LGWSYC Trigger: GCAGTATGACCACCCCAATCACACAGTCACTGTGAC...TGCTTTGAACCCAGAAGGAACGGACTTCTGAGAGCCCGGGTTCCCGGAGCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| CDS-3UTR CCA 90 bp | GGGCTCTCAGAAGTCCGTTCCTTCTGGGTTCAAAGCAAGGATGACCCTGGATGGTCCTGGGACCCATCCTaGTCCCCTTGCCAGTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLSEVRSFWVQSKDDPGWSWDPS*SPCQCF Trigger: GAAGCACTGGCAAGGGGACCAGGATGGGTCCCAGGA...CCATCCAGGGTCATCCTTGCTTTGAACCCAGAAGGAACGGACTTCTGAGAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041164.4 |
||
| CDS-3UTR GCA 90 bp | ATGTACACTTGTGAACGAGCCCCAGCACGGTTCTGCAGGCTCCGGGAACCCGGGTGCTTCCTCTCTTTCTaGCAGCATCTTCAGGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: MYTCERAPARFCRLREPGCFLSF*QHLQVL Trigger: GAGTACCTGAAGATGCTGGCAGAAAGAGAGGAAGCA...CCCGGGTTCCCGGAGCCTGCAGAACCGTGCTGGGGCTCGTTCACAAGTGTACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR GCA 90 bp | AGTGAGGCCCAGGTCCCCTTCACTGGGTTGAACACTAGAACCTCCAGGAGAGGCTTGGGGTGGTCATACTaGACCGACTCTGTCTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SEAQVPFTGLNTRTSRRGLGWSY*TDSVFA Trigger: AGCGAAGACAGAGTCGGTGCAGTATGACCACCCCAA...GCCTCTCCTGGAGGTTCTAGTGTTCAACCCAGTGAAGGGGACCTGGGCCTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| CDS-3UTR CCA 90 bp | TCTGCAGGCTCCGGGAACCCGGGCTCTCAGAAGTCCGTTCCTTCTGGGTTCAAATCTACCTTCCGCTTGTaGAAGCCTGTCAGGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SAGSGNPGSQKSVPSGFKSTFRL*KPVRYS Trigger: GGAGTACCTGACAGGCTTCCACAAGCGGAAGGTAGA...TTTGAACCCAGAAGGAACGGACTTCTGAGAGCCCGGGTTCCCGGAGCCTGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR CCA 90 bp | CAGCACGGTTCTGCAGGCTCCGGGAACCCGGGCTCTCAGAAGTCCGTTCCTTCTGATCTTTGGACTTCCTaGGCAAGGCTTTTGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QHGSAGSGNPGSQKSVPSDLWTS*ARLLLA Trigger: AGCCAACAAAAGCCTTGCCCAGGAAGTCCAAAGATC...AGAAGGAACGGACTTCTGAGAGCCCGGGTTCCCGGAGCCTGCAGAACCGTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR CCA 90 bp | CTCTCAGAAGTCCGTTCCTTCTGGGTTCAAAGCAAGGATGACCCTGGATGGCAAATCCGACGGCGGCGCTaGGTCTTGCTGGTACGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSEVRSFWVQSKDDPGWQIRRRR*VLLVRV Trigger: CACACGTACCAGCAAGACCCAGCGCCGCCGTCGGAT...TTGCCATCCAGGGTCATCCTTGCTTTGAACCCAGAAGGAACGGACTTCTGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| 3UTR CAA 72 bp | ACCCCTGACCATTCTCACCACCCCAGAGGTCAGCCTTaGGTGCATGGGATCCAAGCCAGGACAAAGCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: TPDHSHHPRGQP*VHGIQARTKHK Trigger: CTTGTGCTTTGTCCTGGCTTGGATCCCATGCACCAAAGGCTGACCTCTGGGGTGGTGAGAATGGTCAGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR CAA 72 bp | GTCTGGGCAGGACTTACAATCTTCATGGGTTGTCTTTaGCCTCAGGAACCCCTGTGCGGGGCGAGGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VWAGLTIFMGCL*PQEPLCGARSC Trigger: ACAGGACCTCGCCCCGCACAGGGGTTCCTGAGGCAAAAGACAACCCATGAAGATTGTAAGTCCTGCCCAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| CDS-3UTR GCA 90 bp | TGTGAACGAGCCCCAGCACGGTTCTGCAGGCTCCGGGAACCCGGGCTCTCAGAAAGTTTCTTCTGCTCTTaGTTAAGCCGCTGCTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: CERAPARFCRLREPGLSESFFCS*LSRCFI Trigger: GATAAAGCAGCGGCTTAAGCAAGAGCAGAAGAAACT...TTCTGAGAGCCCGGGTTCCCGGAGCCTGCAGAACCGTGCTGGGGCTCGTTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR CCA 90 bp | CTGCAGGTAACCCTCGGTGTAGCTGGGTTACAGGGACAGCCAAGGACTCAAGCTTCTACCTTCCGCTTGTaGAAGCCTGTCAGGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQVTLGVAGLQGQPRTQASTFRL*KPVRYS Trigger: GGAGTACCTGACAGGCTTCCACAAGCGGAAGGTAGA...AGCTTGAGTCCTTGGCTGTCCCTGTAACCCAGCTACACCGAGGGTTACCTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR CAA 72 bp | CAGGAAGAGCCTCTCCACACGGGTCAAAGGGCATCTTaGATCAGAAGCCTTCTCAGGTGCTCTTGTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QEEPLHTGQRAS*IRSLLRCSCPA Trigger: AGCAGGACAAGAGCACCTGAGAAGGCTTCTGATCAAAGATGCCCTTTGACCCGTGTGGAGAGGCTCTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| CDS-3UTR GCA 90 bp | CTGCAGGCTCCGGGAACCCGGGCTCTCAGAAGTCCGTTCCTTCTGGGTTCAAAGAGTTTCTTCTGCTCTTaGTTAAGCCGCTGCTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: LQAPGTRALRSPFLLGSKSFFCS*LSRCFI Trigger: GATAAAGCAGCGGCTTAAGCAAGAGCAGAAGAAACT...CTTTGAACCCAGAAGGAACGGACTTCTGAGAGCCCGGGTTCCCGGAGCCTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR CCA 90 bp | CTCTTGTGTACACTGGAAATGACTTCATGTCTCCAGAGGCAGAAATCTCCACTGATCCGACGGCGGCGCTaGGTCTTGCTGGTACGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLCTLEMTSCLQRQKSPLIRRRR*VLLVRV Trigger: CACACGTACCAGCAAGACCCAGCGCCGCCGTCGGAT...CAGTGGAGATTTCTGCCTCTGGAGACATGAAGTCATTTCCAGTGTACACAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| CDS-3UTR CCA 90 bp | CCCGGGCTCTCAGAAGTCCGTTCCTTCTGGGTTCAAAGCAAGGATGACCCTGGAGCTTTATCTCTTCAATaGCTGCCTTCTTGCGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PGLSEVRSFWVQSKDDPGALSLQ*LPSCAL Trigger: TAGAGCGCAAGAAGGCAGCCATTGAAGAGATAAAGC...TCCAGGGTCATCCTTGCTTTGAACCCAGAAGGAACGGACTTCTGAGAGCCCGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR TCA 90 bp | TGTCTTGCTCTCCACTTGGTCTGTAGTGTCCTGTGCTTGGCAAGTGCCCTTTTAGAGGGTGTTTCCTCTTaGCCTTCTTCCGACTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CLALHLVCSVLCLASALLEGVSS*PSSDCV Trigger: CACACAGTCGGAAGAAGGTCAAGAGGAAACACCCTC...TAAAAGGGCACTTGCCAAGCACAGGACACTACAGACCAAGTGGAGAGCAAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| CDS-3UTR CCA 90 bp | GCTCACATGGGTACCAAATCCCTCTATTTCCTGGCTTACTGTCCTGATCAGTGGAGAGCAGGGGATCTTTaGACTTCCTGGGCAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AHMGTKSLYFLAYCPDQWRAGDL*TSWARL Trigger: AAGCCTTGCCCAGGAAGTCCAAAGATCCCCTGCTCT...CCACTGATCAGGACAGTAAGCCAGGAAATAGAGGGATTTGGTACCCATGTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR CAA 72 bp | CAGGCTTCTGGCTTTCCCAGCTCCAGGCTGGTAACCTaGTCAGCCTTAGAGGTCTCACTACACAAACTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QASGFPSSRLVT*SALEVSLHKLV Trigger: AACTAGTTTGTGTAGTGAGACCTCTAAGGCTGACAAGGTTACCAGCCTGGAGCTGGGAAAGCCAGAAGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR CAA 72 bp | TGCACCAACTTGCCCAGCACGGCCTTTGCCTTCTTTTaGGCCAACAGAACACAAGGGTCAAGGTTTCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CTNLPSTAFAFF*ANRTQGSRFLR Trigger: TCTTAGAAACCTTGACCCTTGTGTTCTGTTGGCCAAAAAGAAGGCAAAGGCCGTGCTGGGCAAGTTGGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR CAA 72 bp | CTCGGTTCCCTTCTTAGAGTCCCTGCCACATACTCATaGCACTTGATCTGTCTTGCTCTCCACTTGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGSLLRVPATYS*HLICLALHLVC Trigger: ACAGACCAAGTGGAGAGCAAGACAGATCAAGTGCAATGAGTATGTGGCAGGGACTCTAAGAAGGGAACCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR CAA 72 bp | CTTAGAGGTCTCACTACACAAACTAGTTGTGATCTTTaGCTGTTGTGTGGACCTGAACCTGCCACACAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRGLTTQTSCDL*LLCGPEPATQP Trigger: GGGCTGTGTGGCAGGTTCAGGTCCACACAACAGCAAAAGATCACAACTAGTTTGTGTAGTGAGACCTCTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR CAA 72 bp | ACATACTCATTGCACTTGATCTGTCTTGCTCTCCACTaGGTCTGTAGTGTCCTGTGCTTGGCAAGTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TYSLHLICLALH*VCSVLCLASAL Trigger: AAGGGCACTTGCCAAGCACAGGACACTACAGACCAAGTGGAGAGCAAGACAGATCAAGTGCAATGAGTATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR CAA 72 bp | TCCCTTCTTAGAGTCCCTGCCACATACTCATTGCACTaGATCTGTCTTGCTCTCCACTTGGTCTGTAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLLRVPATYSLH*ICLALHLVCSV Trigger: GACACTACAGACCAAGTGGAGAGCAAGACAGATCAAGTGCAATGAGTATGTGGCAGGGACTCTAAGAAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR CAA 72 bp | ATATCTGAGGAACACAAGCAGAGCTATGAAGTCAGGTaGGCTTTTGCTGCTCTTACCTTGAGGCCTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISEEHKQSYEVR*AFAALTLRPLL Trigger: CAGGAGAGGCCTCAAGGTAAGAGCAGCAAAAGCCAACCTGACTTCATAGCTCTGCTTGTGTTCCTCAGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR CAA 72 bp | CTATGTATGTGTGTATGGAGGGTCTCCTGTGTCCTCTaGTGTACACTGGAAATGACTTCATGTCTCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LCMCVWRVSCVL*CTLEMTSCLQR Trigger: CCTCTGGAGACATGAAGTCATTTCCAGTGTACACAAGAGGACACAGGAGACCCTCCATACACACATACATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR CAA 72 bp | ATTCATAAAGGGAAACACCCAGTAGAACAGCACTGCTaGAGGCTCACATGGGTACCAAATCCCTCTATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IHKGKHPVEQHC*RLTWVPNPSIS Trigger: GGAAATAGAGGGATTTGGTACCCATGTGAGCCTCAAGCAGTGCTGTTCTACTGGGTGTTTCCCTTTATGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| 3UTR CAA 72 bp | GAGTTCGTGATTAGAGAAACAGTGTGTAGGGTGTGTTaGTGGTCTCCTATGTATGTGTGTATGGAGGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EFVIRETVCRVC*WSPMYVCMEGL Trigger: GAGACCCTCCATACACACATACATAGGAGACCACAAACACACCCTACACACTGTTTCTCTAATCACGAACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| CDS-3UTR CAA 90 bp | GCCCCAGCACGGTTCTGCAGGCTCCGGGAACCCGGGCTCTCAGAAGTCCGTTCCCGGCGGCGCTGGGTCTaGCTGGTACGTGTGGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: APARFCRLREPGLSEVRSRRRWV*LVRVAL Trigger: AAGTGCCACACGTACCAGCAAGACCCAGCGCCGCCG...GGAACGGACTTCTGAGAGCCCGGGTTCCCGGAGCCTGCAGAACCGTGCTGGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR CAA 90 bp | AACGAGCCCCAGCACGGTTCTGCAGGCTCCGGGAACCCGGGCTCTCAGAAGTCCCGGCGGCGCTGGGTCTaGCTGGTACGTGTGGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: NEPQHGSAGSGNPGSQKSRRRWV*LVRVAL Trigger: AAGTGCCACACGTACCAGCAAGACCCAGCGCCGCCG...GGACTTCTGAGAGCCCGGGTTCCCGGAGCCTGCAGAACCGTGCTGGGGCTCGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR CAA 90 bp | CCAGCACGGTTCTGCAGGCTCCGGGAACCCGGGCTCTCAGAAGTCCGTTCCTTCCTGGGACCCCCAGGTTaGAGGGCTCACTCCCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PARFCRLREPGLSEVRSFLGPPG*RAHSPL Trigger: CAACGGGGAGTGAGCCCTCAAACCTGGGGGTCCCAG...GAAGGAACGGACTTCTGAGAGCCCGGGTTCCCGGAGCCTGCAGAACCGTGCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041164.4 |
||
| CDS-3UTR CAA 90 bp | ACGAGCCCCAGCACGGTTCTGCAGGCTCCGGGAACCCGGGCTCTCAGAAGTCCGTCAATGGCTGCCTTCTaGCGCTCTACCTTCCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TSPSTVLQAPGTRALRSPSMAAF*RSTFRL Trigger: CAAGCGGAAGGTAGAGCGCAAGAAGGCAGCCATTGA...CGGACTTCTGAGAGCCCGGGTTCCCGGAGCCTGCAGAACCGTGCTGGGGCTCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR CAA 90 bp | TGTACACTTGTGAACGAGCCCCAGCACGGTTCTGCAGGCTCCGGGAACCCGGGCAGGGCTCACTCCCCGTaGTGCCTGGCTTTTCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: CTLVNEPQHGSAGSGNPGRAHSP*CLAFPV Trigger: GACTGGAAAAGCCAGGCACAACGGGGAGTGAGCCCT...GCCCGGGTTCCCGGAGCCTGCAGAACCGTGCTGGGGCTCGTTCACAAGTGTACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041164.4 |
||
| CDS CCA 90 bp | AGTCATCCGACGGCGGCGCTGGGTCTTGCTGGTACGTGTGGCACTTaGAGGTTTCTTGGTGGAGTCCTGTGCCCGCCGAGGGTGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SHPTAALGLAGTCGT*RFLGGVLCPPRVFP Trigger: AGGAAACACCCTCGGCGGGCACAGGACTCCACCAAGAAACCTCCAAGTGCCACACGTACCAGCAAGACCCAGCGCCGCCGTCGGATGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS CCA 90 bp | CTTTTCCAGTCATCCGACGGCGGCGCTGGGTCTTGCTGGTACGTGTaGCACTTGGAGGTTTCTTGGTGGAGTCCTGTGCCCGCCGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LFQSSDGGAGSCWYV*HLEVSWWSPVPAEG Trigger: ACCCTCGGCGGGCACAGGACTCCACCAAGAAACCTCCAAGTGCCACACGTACCAGCAAGACCCAGCGCCGCCGTCGGATGACTGGAAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR CAA 90 bp | GCACGGTTCTGCAGGCTCCGGGAACCCGGGCTCTCAGAAGTCCGTTCCTTCTGGCGCTCTACCTTCCGCTaGTGGAAGCCTGTCAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: ARFCRLREPGLSEVRSFWRSTFR*WKPVRY Trigger: GTACCTGACAGGCTTCCACAAGCGGAAGGTAGAGCG...CCAGAAGGAACGGACTTCTGAGAGCCCGGGTTCCCGGAGCCTGCAGAACCGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS CCA 90 bp | TGTGCCTGGCTTTTCCAGTCATCCGACGGCGGCGCTGGGTCTTGCTaGTACGTGTGGCACTTGGAGGTTTCTTGGTGGAGTCCTGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CAWLFQSSDGGAGSC*YVWHLEVSWWSPVP Trigger: GGGCACAGGACTCCACCAAGAAACCTCCAAGTGCCACACGTACCAGCAAGACCCAGCGCCGCCGTCGGATGACTGGAAAAGCCAGGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS CCA 90 bp | CACTCCCCGTTGTGCCTGGCTTTTCCAGTCATCCGACGGCGGCGCTaGGTCTTGCTGGTACGTGTGGCACTTGGAGGTTTCTTGGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HSPLCLAFPVIRRRR*VLLVRVALGGFLVE Trigger: CTCCACCAAGAAACCTCCAAGTGCCACACGTACCAGCAAGACCCAGCGCCGCCGTCGGATGACTGGAAAAGCCAGGCACAACGGGGAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR CAA 90 bp | TGTGAACGAGCCCCAGCACGGTTCTGCAGGCTCCGGGAACCCGGGCTCTCAGAATCAATGGCTGCCTTCTaGCGCTCTACCTTCCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CERAPARFCRLREPGLSESMAAF*RSTFRL Trigger: CAAGCGGAAGGTAGAGCGCAAGAAGGCAGCCATTGA...TTCTGAGAGCCCGGGTTCCCGGAGCCTGCAGAACCGTGCTGGGGCTCGTTCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR CAA 90 bp | CAGCACGGTTCTGCAGGCTCCGGGAACCCGGGCTCTCAGAAGTCCGTTCCTTCTGAGAGCAGGGGATCTTaGGACTTCCTGGGCAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QHGSAGSGNPGSQKSVPSESRGS*DFLGKA Trigger: AGCCTTGCCCAGGAAGTCCAAAGATCCCCTGCTCTC...AGAAGGAACGGACTTCTGAGAGCCCGGGTTCCCGGAGCCTGCAGAACCGTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR CAA 90 bp | ATGTACACTTGTGAACGAGCCCCAGCACGGTTCTGCAGGCTCCGGGAACCCGGGGAGAGCAGGGGATCTTaGGACTTCCTGGGCAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: MYTCERAPARFCRLREPGESRGS*DFLGKA Trigger: AGCCTTGCCCAGGAAGTCCAAAGATCCCCTGCTCTC...CCCGGGTTCCCGGAGCCTGCAGAACCGTGCTGGGGCTCGTTCACAAGTGTACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS GCA 90 bp | CTGTGCCCGCCGAGGGTGTTTCCTCTTGACCTTCTTCCGACTGTGTaGGTGCAGTGTAGCTGTGAGGGAGGAGATGCGCTGAGAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LCPPRVFPLDLLPTV*VQCSCEGGDALREQ Trigger: CTGCTCTCTCAGCGCATCTCCTCCCTCACAGCTACACTGCACGCACACAGTCGGAAGAAGGTCAAGAGGAAACACCCTCGGCGGGCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS GCA 90 bp | CGTTGTGCCTGGCTTTTCCAGTCATCCGACGGCGGCGCTGGGTCTTaGTGGTACGTGTGGCACTTGGAGGTTTCTTGGTGGAGTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RCAWLFQSSDGGAGS*WYVWHLEVSWWSPV Trigger: CACAGGACTCCACCAAGAAACCTCCAAGTGCCACACGTACCAGCAAGACCCAGCGCCGCCGTCGGATGACTGGAAAAGCCAGGCACAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR CAA 90 bp | GCACGGTTCTGCAGGCTCCGGGAACCCGGGCTCTCAGAAGTCCGTTCCTTCTGGTCCTGGGCAAGGCTTTaGTTGGCTTTTCCAGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: ARFCRLREPGLSEVRSFWSWARL*LAFPGM Trigger: CATCCCTGGAAAAGCCAACAAAAGCCTTGCCCAGGA...CCAGAAGGAACGGACTTCTGAGAGCCCGGGTTCCCGGAGCCTGCAGAACCGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR CAA 90 bp | GCACGGTTCTGCAGGCTCCGGGAACCCGGGCTCTCAGAAGTCCGTTCCTTCTGGTGGTACGTGTGGCACTaGGAGGTTTCTTGGTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ARFCRLREPGLSEVRSFWWYVWH*EVSWWS Trigger: ACTCCACCAAGAAACCTCCAAGTGCCACACGTACCA...CCAGAAGGAACGGACTTCTGAGAGCCCGGGTTCCCGGAGCCTGCAGAACCGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR CAA 90 bp | CAGCACGGTTCTGCAGGCTCCGGGAACCCGGGCTCTCAGAAGTCCGTTCCTTCTTCCTGGGCAAGGCTTTaGTTGGCTTTTCCAGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: QHGSAGSGNPGSQKSVPSSWARL*LAFPGM Trigger: CATCCCTGGAAAAGCCAACAAAAGCCTTGCCCAGGA...AGAAGGAACGGACTTCTGAGAGCCCGGGTTCCCGGAGCCTGCAGAACCGTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS GCA 90 bp | TCCTGGGACCCATCCTGGTCCCCTTGCCAGTGCTTCCTCTCTTTCTaGCAGCATCTTCAGGTACTCCTGGTGGCGCTCTTCCCGAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SWDPSWSPCQCFLSF*QHLQVLLVALFPKF Trigger: AAACTTCGGGAAGAGCGCCACCAGGAGTACCTGAAGATGCTGGCAGAAAGAGAGGAAGCACTGGCAAGGGGACCAGGATGGGTCCCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041164.4 |
||
| CDS GCA 90 bp | CTTGCTGGTACGTGTGGCACTTGGAGGTTTCTTGGTGGAGTCCTGTaGCCGCCGAGGGTGTTTCCTCTTGACCTTCTTCCGACTGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LAGTCGTWRFLGGVL*PPRVFPLDLLPTVC Trigger: GCACACAGTCGGAAGAAGGTCAAGAGGAAACACCCTCGGCGGGCACAGGACTCCACCAAGAAACCTCCAAGTGCCACACGTACCAGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR CAA 90 bp | GCAGGCTCCGGGAACCCGGGCTCTCAGAAGTCCGTTCCTTCTGGGTTCAAAGCACGAGGGTGTTTCCTCTaGACCTTCTTCCGACTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: AGSGNPGSQKSVPSGFKARGCFL*TFFRLC Trigger: ACACAGTCGGAAGAAGGTCAAGAGGAAACACCCTCG...TGCTTTGAACCCAGAAGGAACGGACTTCTGAGAGCCCGGGTTCCCGGAGCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS TCA 90 bp | TGTGGAAGCCTGTCAGGTACTCCCGCCGCTTCTCTTCATCAAAGTTaGGAACGAGCCGGGGCCGCCGGTCGTCTCCATCTCTTTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CGSLSGTPAASLHQS*ERAGAAGRLHLFSS Trigger: AGAAGAAAAGAGATGGAGACGACCGGCGGCCCCGGCTCGTTCTCAACTTTGATGAAGAGAAGCGGCGGGAGTACCTGACAGGCTTCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS TCA 90 bp | GCCCCTGAGAGGTCCAGGTCACTGATGGTGGTCACAGTGACTGTGTaGTTGGGGTGGTCATACTGCACCGACTCTGTCTTCGCTGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: APERSRSLMVVTVTV*LGWSYCTDSVFAVT Trigger: AGTGACAGCGAAGACAGAGTCGGTGCAGTATGACCACCCCAATCACACAGTCACTGTGACCACCATCAGTGACCTGGACCTCTCAGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| CDS CCA 90 bp | GCCAGTGCTTCCTCTCTTTCTGCCAGCATCTTCAGGTACTCCTGGTaGCGCTCTTCCCGAAGTTTCTTCTGCTCTTGCTTAAGCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ASASSLSASIFRYSW*RSSRSFFCSCLSRC Trigger: GCAGCGGCTTAAGCAAGAGCAGAAGAAACTTCGGGAAGAGCGCCACCAGGAGTACCTGAAGATGCTGGCAGAAAGAGAGGAAGCACTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041164.4 |
||
| CDS CCA 90 bp | TTTATCTCTTCAATGGCTGCCTTCTTGCGCTCTACCTTCCGCTTGTaGAAGCCTGTCAGGTACTCCCTGGGTCCTGTGTGGCGGGTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: FISSMAAFLRSTFRL*KPVRYSLGPVWRVL Trigger: TAGGACCCGCCACACAGGACCCAGGGAGTACCTGACAGGCTTCCACAAGCGGAAGGTAGAGCGCAAGAAGGCAGCCATTGAAGAGATAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123013.2 |
||
| CDS-3UTR CAA 90 bp | TGTACACTTGTGAACGAGCCCCAGCACGGTTCTGCAGGCTCCGGGAACCCGGGCAAGTTTCTTCTGCTCTaGCTTAAGCCGCTGCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: CTLVNEPQHGSAGSGNPGKFLLL*LKPLLY Trigger: ATAAAGCAGCGGCTTAAGCAAGAGCAGAAGAAACTT...GCCCGGGTTCCCGGAGCCTGCAGAACCGTGCTGGGGCTCGTTCACAAGTGTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR CAA 90 bp | TCTGCAGGCTCCGGGAACCCGGGCTCTCAGAAGTCCGTTCCTTCTGGGTTCAAATGGGCAAGGCTTTTGTaGGCTTTTCCAGGGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: SAGSGNPGSQKSVPSGFKWARLL*AFPGMT Trigger: TGTCATCCCTGGAAAAGCCAACAAAAGCCTTGCCCA...TTTGAACCCAGAAGGAACGGACTTCTGAGAGCCCGGGTTCCCGGAGCCTGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS CCA 90 bp | CTTGCCAGTGCTTCCTCTCTTTCTGCCAGCATCTTCAGGTACTCCTaGTGGCGCTCTTCCCGAAGTTTCTTCTGCTCTTGCTTAAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LASASSLSASIFRYS*WRSSRSFFCSCLSR Trigger: GCGGCTTAAGCAAGAGCAGAAGAAACTTCGGGAAGAGCGCCACCAGGAGTACCTGAAGATGCTGGCAGAAAGAGAGGAAGCACTGGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041164.4 |
||
| CDS CCA 90 bp | TCCAGTGCTTCCTCTCTTTCTGCCAGCATCTTCAGGTACTCCTGGTaGCGCTCTTCCCGAAGTTTCTTCTGCTCTTGCTTAAGCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSASSLSASIFRYSW*RSSRSFFCSCLSRC Trigger: GCAGCGGCTTAAGCAAGAGCAGAAGAAACTTCGGGAAGAGCGCCACCAGGAGTACCTGAAGATGCTGGCAGAAAGAGAGGAAGCACTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| CDS CCA 90 bp | TCCTCCAGTGCTTCCTCTCTTTCTGCCAGCATCTTCAGGTACTCCTaGTGGCGCTCTTCCCGAAGTTTCTTCTGCTCTTGCTTAAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSASSLSASIFRYS*WRSSRSFFCSCLSR Trigger: GCGGCTTAAGCAAGAGCAGAAGAAACTTCGGGAAGAGCGCCACCAGGAGTACCTGAAGATGCTGGCAGAAAGAGAGGAAGCACTGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| CDS GCA 90 bp | TGGTGGCGCTCTTCCCGAAGTTTCTTCTGCTCTTGCTTAAGCCGCTaGTTTATCTCTTCAATGGCTGCCTTCTTGCGCTCTACCTTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: WWRSSRSFFCSCLSR*FISSMAAFLRSTFR Trigger: GCGGAAGGTAGAGCGCAAGAAGGCAGCCATTGAAGAGATAAAGCAGCGGCTTAAGCAAGAGCAGAAGAAACTTCGGGAAGAGCGCCACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS GCA 90 bp | TTCAGGTACTCCTGGTGGCGCTCTTCCCGAAGTTTCTTCTGCTCTTaGTTAAGCCGCTGCTTTATCTCTTCAATGGCTGCCTTCTTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: FRYSWWRSSRSFFCS*LSRCFISSMAAFLR Trigger: GCGCAAGAAGGCAGCCATTGAAGAGATAAAGCAGCGGCTTAAGCAAGAGCAGAAGAAACTTCGGGAAGAGCGCCACCAGGAGTACCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS CCA 90 bp | TTTATCTCTTCAATGGCTGCCTTCTTGCGCTCTACCTTCCGCTTGTaGAAGCCTGTCAGGTACTCCCGCCGCTTCTCTTCATCAAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FISSMAAFLRSTFRL*KPVRYSRRFSSSKL Trigger: CAACTTTGATGAAGAGAAGCGGCGGGAGTACCTGACAGGCTTCCACAAGCGGAAGGTAGAGCGCAAGAAGGCAGCCATTGAAGAGATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS-3UTR CAA 90 bp | TGTCTTGCTCTCCACTTGGTCTGTAGTGTCCTGTGCTTGGCAAGTGCCCTTTTACGAGGGTGTTTCCTCTaGACCTTCTTCCGACTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: CLALHLVCSVLCLASALLRGCFL*TFFRLC Trigger: ACACAGTCGGAAGAAGGTCAAGAGGAAACACCCTCG...TAAAAGGGCACTTGCCAAGCACAGGACACTACAGACCAAGTGGAGAGCAAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| CDS-3UTR CAA 90 bp | TGTCTTGCTCTCCACTTGGTCTGTAGTGTCCTGTGCTTGGCAAGTGCCCTTTTATGGTACGTGTGGCACTaGGAGGTTTCTTGGTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: CLALHLVCSVLCLASALLWYVWH*EVSWWS Trigger: ACTCCACCAAGAAACCTCCAAGTGCCACACGTACCA...TAAAAGGGCACTTGCCAAGCACAGGACACTACAGACCAAGTGGAGAGCAAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| CDS GCA 90 bp | TTTCTTCTGCTCTTGCTTAAGCCGCTGCTTTATCTCTTCAATGGCTaGCTTCTTGCGCTCTACCTTCCGCTTGTGGAAGCCTGTCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: FLLLLLKPLLYLFNG*LLALYLPLVEACQV Trigger: TACCTGACAGGCTTCCACAAGCGGAAGGTAGAGCGCAAGAAGGCAGCCATTGAAGAGATAAAGCAGCGGCTTAAGCAAGAGCAGAAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041164.4 ENSMUST00000123013.2 ENSMUST00000138880.9 |
||
| CDS-3UTR CAA 90 bp | ATATCTGAGGAACACAAGCAGAGCTATGAAGTCAGGTTGGCTTTTGCTGCTCTTCGCTCTACCTTCCGCTaGTGGAAGCCTGTCAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: ISEEHKQSYEVRLAFAALRSTFR*WKPVRY Trigger: GTACCTGACAGGCTTCCACAAGCGGAAGGTAGAGCG...AAGAGCAGCAAAAGCCAACCTGACTTCATAGCTCTGCTTGTGTTCCTCAGATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| CDS-3UTR CAA 90 bp | TTGTCAGCCTTAGAGGTCTCACTACACAAACTAGTTGTGATCTTTTGCTGTTGTTGGGCAAGGCTTTTGTaGGCTTTTCCAGGGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: LSALEVSLHKLVVIFCCCWARLL*AFPGMT Trigger: TGTCATCCCTGGAAAAGCCAACAAAAGCCTTGCCCA...ACAACAGCAAAAGATCACAACTAGTTTGTGTAGTGAGACCTCTAAGGCTGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| CDS CCA 72 bp | ACGGCGGCGCTGGGTCTTGCTGGTACGTGTGGCACTTaGAGGTTTCTTGGTGGAGTCCTGTGCCCGCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TAALGLAGTCGT*RFLGGVLCPPR Trigger: CCTCGGCGGGCACAGGACTCCACCAAGAAACCTCCAAGTGCCACACGTACCAGCAAGACCCAGCGCCGCCGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
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| CDS CAA 72 bp | GACGGCGGCGCTGGGTCTTGCTGGTACGTGTGGCACTaGGAGGTTTCTTGGTGGAGTCCTGTGCCCGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: DGGAGSCWYVWH*EVSWWSPVPAE Trigger: CTCGGCGGGCACAGGACTCCACCAAGAAACCTCCAAGTGCCACACGTACCAGCAAGACCCAGCGCCGCCGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS CAA 90 bp | CAGTCATCCGACGGCGGCGCTGGGTCTTGCTGGTACGTGTGGCACTaGGAGGTTTCTTGGTGGAGTCCTGTGCCCGCCGAGGGTGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: QSSDGGAGSCWYVWH*EVSWWSPVPAEGVS Trigger: GGAAACACCCTCGGCGGGCACAGGACTCCACCAAGAAACCTCCAAGTGCCACACGTACCAGCAAGACCCAGCGCCGCCGTCGGATGACTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS CAA 90 bp | CGGCGGCGCTGGGTCTTGCTGGTACGTGTGGCACTTGGAGGTTTCTaGGTGGAGTCCTGTGCCCGCCGAGGGTGTTTCCTCTTGACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RRRWVLLVRVALGGF*VESCARRGCFLLTF Trigger: GAAGGTCAAGAGGAAACACCCTCGGCGGGCACAGGACTCCACCAAGAAACCTCCAAGTGCCACACGTACCAGCAAGACCCAGCGCCGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS CCA 72 bp | TCATCCGACGGCGGCGCTGGGTCTTGCTGGTACGTGTaGCACTTGGAGGTTTCTTGGTGGAGTCCTGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SSDGGAGSCWYV*HLEVSWWSPVP Trigger: GGGCACAGGACTCCACCAAGAAACCTCCAAGTGCCACACGTACCAGCAAGACCCAGCGCCGCCGTCGGATGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS CCA 72 bp | TCCAGGGATGACATCTCCTCTTCCTGGGACCCATCCTaGTCCCCTTGCTCAGGCAGGGGCAGACCTAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRDDISSSWDPS*SPCSGRGRPSS Trigger: GCTGCTAGGTCTGCCCCTGCCTGAGCAAGGGGACCAGGATGGGTCCCAGGAAGAGGAGATGTCATCCCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| CDS TCA 72 bp | CTGTCAGGTACTCCCGCCGCTTCTCTTCATCAAAGTTaGGAACGAGCCGGGGCCGCCGGTCGTCTCCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: LSGTPAASLHQS*ERAGAAGRLHL Trigger: GAGATGGAGACGACCGGCGGCCCCGGCTCGTTCTCAACTTTGATGAAGAGAAGCGGCGGGAGTACCTGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
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| CDS CAA 72 bp | CCTGTCAGGTACTCCCGCCGCTTCTCTTCATCAAAGTaGAGAACGAGCCGGGGCCGCCGGTCGTCTCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: PVRYSRRFSSSK*RTSRGRRSSPS Trigger: AGATGGAGACGACCGGCGGCCCCGGCTCGTTCTCAACTTTGATGAAGAGAAGCGGCGGGAGTACCTGACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
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| CDS CAA 90 bp | CCGTTGTGCCTGGCTTTTCCAGTCATCCGACGGCGGCGCTGGGTCTaGCTGGTACGTGTGGCACTTGGAGGTTTCTTGGTGGAGTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PLCLAFPVIRRRRWV*LVRVALGGFLVESC Trigger: ACAGGACTCCACCAAGAAACCTCCAAGTGCCACACGTACCAGCAAGACCCAGCGCCGCCGTCGGATGACTGGAAAAGCCAGGCACAACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
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| CDS GCA 72 bp | TGGCTTTTCCAGTCATCCGACGGCGGCGCTGGGTCTTaGTGGTACGTGTGGCACTTGGAGGTTTCTTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: WLFQSSDGGAGS*WYVWHLEVSWW Trigger: CCACCAAGAAACCTCCAAGTGCCACACGTACCAGCAAGACCCAGCGCCGCCGTCGGATGACTGGAAAAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS CCA 72 bp | GGGTCTTGCTGGTACGTGTGGCACTTGGAGGTTTCTTaGTGGAGTCCTGTGCCCGCCGAGGGTGTTTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSCWYVWHLEVS*WSPVPAEGVSS Trigger: AGAGGAAACACCCTCGGCGGGCACAGGACTCCACCAAGAAACCTCCAAGTGCCACACGTACCAGCAAGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS CCA 72 bp | TTGTGCCTGGCTTTTCCAGTCATCCGACGGCGGCGCTaGGTCTTGCTGGTACGTGTGGCACTTGGAGGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LCLAFPVIRRRR*VLLVRVALGGF Trigger: GAAACCTCCAAGTGCCACACGTACCAGCAAGACCCAGCGCCGCCGTCGGATGACTGGAAAAGCCAGGCACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
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| CDS CAA 72 bp | TGGGTCTTGCTGGTACGTGTGGCACTTGGAGGTTTCTaGGTGGAGTCCTGTGCCCGCCGAGGGTGTTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: WVLLVRVALGGF*VESCARRGCFL Trigger: GAGGAAACACCCTCGGCGGGCACAGGACTCCACCAAGAAACCTCCAAGTGCCACACGTACCAGCAAGACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
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| CDS CAA 72 bp | CTGGCTTTTCCAGTCATCCGACGGCGGCGCTGGGTCTaGCTGGTACGTGTGGCACTTGGAGGTTTCTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LAFPVIRRRRWV*LVRVALGGFLV Trigger: CACCAAGAAACCTCCAAGTGCCACACGTACCAGCAAGACCCAGCGCCGCCGTCGGATGACTGGAAAAGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
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| CDS CAA 90 bp | GGAGGTTTCTTGGTGGAGTCCTGTGCCCGCCGAGGGTGTTTCCTCTaGACCTTCTTCCGACTGTGTGCGTGCAGTGTAGCTGTGAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GGFLVESCARRGCFL*TFFRLCACSVAVRE Trigger: CTCCCTCACAGCTACACTGCACGCACACAGTCGGAAGAAGGTCAAGAGGAAACACCCTCGGCGGGCACAGGACTCCACCAAGAAACCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
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| CDS TCA 72 bp | CCTGTGTGGCGGGTCCTAGGAGTGCCCCCACCTTCCTaGCTCGTGCTTCCTTCTTCCTGTCTAATCTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PVWRVLGVPPPS*LVLPSSCLISA Trigger: AGCAGAGATTAGACAGGAAGAAGGAAGCACGAGTCAGGAAGGTGGGGGCACTCCTAGGACCCGCCACACAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123013.2 |
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| CDS GCA 72 bp | CCGAGGGTGTTTCCTCTTGACCTTCTTCCGACTGTGTaGGTGCAGTGTAGCTGTGAGGGAGGAGATGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PRVFPLDLLPTV*VQCSCEGGDAL Trigger: CAGCGCATCTCCTCCCTCACAGCTACACTGCACGCACACAGTCGGAAGAAGGTCAAGAGGAAACACCCTCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
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| CDS GCA 72 bp | ACGTGTGGCACTTGGAGGTTTCTTGGTGGAGTCCTGTaGCCGCCGAGGGTGTTTCCTCTTGACCTTCTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: TCGTWRFLGGVL*PPRVFPLDLLP Trigger: CGGAAGAAGGTCAAGAGGAAACACCCTCGGCGGGCACAGGACTCCACCAAGAAACCTCCAAGTGCCACACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
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| CDS CCA 72 bp | CTTTTCCAGTCATCCGACGGCGGCGCTGGGTCTTGCTaGTACGTGTGGCACTTGGAGGTTTCTTGGTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LFQSSDGGAGSC*YVWHLEVSWWS Trigger: ACTCCACCAAGAAACCTCCAAGTGCCACACGTACCAGCAAGACCCAGCGCCGCCGTCGGATGACTGGAAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
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| CDS CAA 72 bp | TTGGTGGAGTCCTGTGCCCGCCGAGGGTGTTTCCTCTaGACCTTCTTCCGACTGTGTGCGTGCAGTGTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LVESCARRGCFL*TFFRLCACSVA Trigger: AGCTACACTGCACGCACACAGTCGGAAGAAGGTCAAGAGGAAACACCCTCGGCGGGCACAGGACTCCACCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
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| CDS CAA 90 bp | TGCTTTATCTCTTCAATGGCTGCCTTCTTGCGCTCTACCTTCCGCTaGTGGAAGCCTGTCAGGTACTCCCTGGGTCCTGTGTGGCGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: CFISSMAAFLRSTFR*WKPVRYSLGPVWRV Trigger: GACCCGCCACACAGGACCCAGGGAGTACCTGACAGGCTTCCACAAGCGGAAGGTAGAGCGCAAGAAGGCAGCCATTGAAGAGATAAAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123013.2 |
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| CDS GCA 72 bp | CAGCTCATCTGCCTCCTCCAGTGCTTCCTCTCTTTCTaGCAGCATCTTCAGGTACTCCTGGTGGCGCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QLICLLQCFLSF*QHLQVLLVALF Trigger: GAAGAGCGCCACCAGGAGTACCTGAAGATGCTGGCAGAAAGAGAGGAAGCACTGGAGGAGGCAGATGAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138880.9 |
||
| CDS CAA 72 bp | TCTTCAATGGCTGCCTTCTTGCGCTCTACCTTCCGCTaGTGGAAGCCTGTCAGGTACTCCCGCCGCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSMAAFLRSTFR*WKPVRYSRRFS Trigger: AGAGAAGCGGCGGGAGTACCTGACAGGCTTCCACAAGCGGAAGGTAGAGCGCAAGAAGGCAGCCATTGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS CAA 72 bp | TCTTCAATGGCTGCCTTCTTGCGCTCTACCTTCCGCTaGTGGAAGCCTGTCAGGTACTCCCTGGGTCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSMAAFLRSTFR*WKPVRYSLGPV Trigger: CACAGGACCCAGGGAGTACCTGACAGGCTTCCACAAGCGGAAGGTAGAGCGCAAGAAGGCAGCCATTGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123013.2 |
||
| CDS CCA 72 bp | TTTGTTGGCTTTTCCAGGGATGACATCTCCTCTTCCTaGGACCCATCCTGGTCCCCTTGCCAGTGCTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FVGFSRDDISSS*DPSWSPCQCFL Trigger: GAGGAAGCACTGGCAAGGGGACCAGGATGGGTCCCAGGAAGAGGAGATGTCATCCCTGGAAAAGCCAACAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041164.4 |
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| CDS CAA 90 bp | TGCTCTTGCTTAAGCCGCTGCTTTATCTCTTCAATGGCTGCCTTCTaGCGCTCTACCTTCCGCTTGTGGAAGCCTGTCAGGTACTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: CSCLSRCFISSMAAF*RSTFRLWKPVRYSR Trigger: GCGGGAGTACCTGACAGGCTTCCACAAGCGGAAGGTAGAGCGCAAGAAGGCAGCCATTGAAGAGATAAAGCAGCGGCTTAAGCAAGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS CAA 90 bp | TGCGCTGAGAGAGCAGGGGATCTTTGGACTTCCTGGGCAAGGCTTTaGTTGGCTTTTCCAGGGATGACATCTCCTCTTCCTGGGACCCAT | + |
|
Preference number: 6 (lower is better) Translates to: CAERAGDLWTSWARL*LAFPGMTSPLPGTH Trigger: ATGGGTCCCAGGAAGAGGAGATGTCATCCCTGGAAAAGCCAACAAAAGCCTTGCCCAGGAAGTCCAAAGATCCCCTGCTCTCTCAGCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
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| CDS CAA 90 bp | TGCTCTTGCTTAAGCCGCTGCTTTATCTCTTCAATGGCTGCCTTCTaGCGCTCTACCTTCCGCTTGTGGAAGCCTGTCAGGTACTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: CSCLSRCFISSMAAF*RSTFRLWKPVRYSL Trigger: CAGGGAGTACCTGACAGGCTTCCACAAGCGGAAGGTAGAGCGCAAGAAGGCAGCCATTGAAGAGATAAAGCAGCGGCTTAAGCAAGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123013.2 |
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| CDS GCA 72 bp | CTCTTGCTTAAGCCGCTGCTTTATCTCTTCAATGGCTaGCTTCTTGCGCTCTACCTTCCGCTTGTGGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LLLKPLLYLFNG*LLALYLPLVEA Trigger: GGCTTCCACAAGCGGAAGGTAGAGCGCAAGAAGGCAGCCATTGAAGAGATAAAGCAGCGGCTTAAGCAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041164.4 ENSMUST00000123013.2 ENSMUST00000138880.9 |
||
| CDS GCA 72 bp | TCCTGGTGGCGCTCTTCCCGAAGTTTCTTCTGCTCTTaGTTAAGCCGCTGCTTTATCTCTTCAATGGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SWWRSSRSFFCS*LSRCFISSMAA Trigger: GGCAGCCATTGAAGAGATAAAGCAGCGGCTTAAGCAAGAGCAGAAGAAACTTCGGGAAGAGCGCCACCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS CAA 72 bp | TTAAGCCGCTGCTTTATCTCTTCAATGGCTGCCTTCTaGCGCTCTACCTTCCGCTTGTGGAAGCCTGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSRCFISSMAAF*RSTFRLWKPVR Trigger: CCTGACAGGCTTCCACAAGCGGAAGGTAGAGCGCAAGAAGGCAGCCATTGAAGAGATAAAGCAGCGGCTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041164.4 ENSMUST00000123013.2 ENSMUST00000138880.9 |
||
| CDS CAA 72 bp | CTCCTGGTGGCGCTCTTCCCGAAGTTTCTTCTGCTCTaGCTTAAGCCGCTGCTTTATCTCTTCAATGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LLVALFPKFLLL*LKPLLYLFNGC Trigger: GCAGCCATTGAAGAGATAAAGCAGCGGCTTAAGCAAGAGCAGAAGAAACTTCGGGAAGAGCGCCACCAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS CAA 90 bp | TGCTTTATCTCTTCAATGGCTGCCTTCTTGCGCTCTACCTTCCGCTaGTGGAAGCCTGTCAGGTACTCCCGCCGCTTCTCTTCATCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: CFISSMAAFLRSTFR*WKPVRYSRRFSSSK Trigger: CTTTGATGAAGAGAAGCGGCGGGAGTACCTGACAGGCTTCCACAAGCGGAAGGTAGAGCGCAAGAAGGCAGCCATTGAAGAGATAAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS CAA 90 bp | CTTCAGGTACTCCTGGTGGCGCTCTTCCCGAAGTTTCTTCTGCTCTaGCTTAAGCCGCTGCTTTATCTCTTCAATGGCTGCCTTCTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: LQVLLVALFPKFLLL*LKPLLYLFNGCLLA Trigger: CGCAAGAAGGCAGCCATTGAAGAGATAAAGCAGCGGCTTAAGCAAGAGCAGAAGAAACTTCGGGAAGAGCGCCACCAGGAGTACCTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS CAA 72 bp | AGAGCAGGGGATCTTTGGACTTCCTGGGCAAGGCTTTaGTTGGCTTTTCCAGGGATGACATCTCCTCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RAGDLWTSWARL*LAFPGMTSPLP Trigger: AGGAAGAGGAGATGTCATCCCTGGAAAAGCCAACAAAAGCCTTGCCCAGGAAGTCCAAAGATCCCCTGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
||
| CDS GCA 72 bp | AGGTACTCCTGGTGGCGCTCTTCCCGAAGTTTCTTCTaGTCTTGCTTAAGCCGCTGCTTTATCTCTTCAATG | + |
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Preference number: 6 (lower is better) Translates to: RYSWWRSSRSFF*SCLSRCFISSM Trigger: CATTGAAGAGATAAAGCAGCGGCTTAAGCAAGAGCAGAAGAAACTTCGGGAAGAGCGCCACCAGGAGTACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
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| CDS GCA 72 bp | TCTTCCCGAAGTTTCTTCTGCTCTTGCTTAAGCCGCTaGTTTATCTCTTCAATGGCTGCCTTCTTGCGCTCT | + |
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Preference number: 6 (lower is better) Translates to: SSRSFFCSCLSR*FISSMAAFLRS Trigger: AGAGCGCAAGAAGGCAGCCATTGAAGAGATAAAGCAGCGGCTTAAGCAAGAGCAGAAGAAACTTCGGGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041164.4 ENSMUST00000138880.9 |
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| CDS CAA 72 bp | TCCTGTCTAATCTCTGCTGTTCCTGAGTTTGCGTTCTaGAACTTTCCCGCACAGGGTTTTACTTTGCAATCC | + |
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Preference number: 6 (lower is better) Translates to: SCLISAVPEFAF*NFPAQGFTLQS Trigger: GGATTGCAAAGTAAAACCCTGTGCGGGAAAGTTCAAGAACGCAAACTCAGGAACAGCAGAGATTAGACAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123013.2 |
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