Pregenerated sensors for NOL11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018433Ensembl transcript IDs: ENSMUST00000018577.8, ENSMUST00000106757.8
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGGCATCAGATAACATTACAGATGGTTGTAAGCCACCATGTGGTTaGCAGGAATTGAACTCAGGAACTCTGAAAGAGCAGTCAGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: RASDNITDGCKPPCG*QELNSGTLKEQSVL Trigger: GAGCACTGACTGCTCTTTCAGAGTTCCTGAGTTCAATTCCTGCCAACCACATGGTGGCTTACAACCATCTGTAATGTTATCTGATGCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| 3UTR CAA 90 bp | ATCCATCAAGTTAGGTGTGGTGGCCACACCTTTACTCCCAGCACTTaGGGAGGTGGATCTCTGAGTTCGCGGCCAGCCTGGTCCATATAT | + |
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Preference number: 2 (lower is better) Translates to: IHQVRCGGHTFTPST*GGGSLSSRPAWSIY Trigger: ATATATGGACCAGGCTGGCCGCGAACTCAGAGATCCACCTCCCAAAGTGCTGGGAGTAAAGGTGTGGCCACCACACCTAACTTGATGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| 3UTR-3UTR TCA 90 bp | TATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGAATTTCTCAACGCTGGCTTGGTGCCCTaGGTGCTCCATGATACAGAT | + |
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Preference number: 2 (lower is better) Translates to: YPCHSSSETPRWNREFLNAGLVP*VLHDTD Trigger: ATCTGTATCATGGAGCACTCAGGGCACCAAGCCAGC...GTTGAGAAATTCCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| 3UTR-3UTR CCA 90 bp | TACCATATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGAATTTCTGCAGTATGCTGGCTTaGTGCCCTGAGTGCTCCATG | + |
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Preference number: 2 (lower is better) Translates to: YHILVTVHLRHHAGTGNFCSMLA*CPECSM Trigger: CATGGAGCACTCAGGGCACCAAGCCAGCATACTGCA...GAAATTCCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATATGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| 3UTR-3UTR CCA 90 bp | AATCTTTACCATATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGTGCAGTATGCTGGCTTaGTGCCCTGAGTGCTCCATG | + |
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Preference number: 2 (lower is better) Translates to: NLYHILVTVHLRHHAGTGCSMLA*CPECSM Trigger: CATGGAGCACTCAGGGCACCAAGCCAGCATACTGCA...CCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATATGGTAAAGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| 3UTR-3UTR TCA 90 bp | AATCTTTACCATATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGAGTGCTCTTAATTGCTaGGCCATCTCTCCAGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: NLYHILVTVHLRHHAGTGSALNC*AISPAP Trigger: AGGGGCTGGAGAGATGGCTCAGCAATTAAGAGCACT...CCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATATGGTAAAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| 3UTR-3UTR TCA 90 bp | TATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGAATTTCTCAACAGGAGTGATGGTCTGTaGTGGTCCAGGGACTCATAT | + |
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Preference number: 2 (lower is better) Translates to: YPCHSSSETPRWNREFLNRSDGL*WSRDSY Trigger: ATATGAGTCCCTGGACCATCACAGACCATCACTCCT...GTTGAGAAATTCCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| 3UTR-3UTR TCA 90 bp | TACCATATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGAATTTCAGGAGTGATGGTCTGTaGTGGTCCAGGGACTCATAT | + |
|
Preference number: 2 (lower is better) Translates to: YHILVTVHLRHHAGTGNFRSDGL*WSRDSY Trigger: ATATGAGTCCCTGGACCATCACAGACCATCACTCCT...GAAATTCCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATATGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| 3UTR-3UTR GCA 90 bp | TACCATATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGAATTTCAGTATGCTGGCTTGGTaGCCTGAGTGCTCCATGATA | + |
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Preference number: 2 (lower is better) Translates to: YHILVTVHLRHHAGTGNFSMLAW*PECSMI Trigger: TATCATGGAGCACTCAGGGCACCAAGCCAGCATACT...GAAATTCCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATATGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| 3UTR-3UTR TCA 90 bp | TATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGAATTTCTCAACACAACATCCCTCCAGTaGTGTCTGCAACCTAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: YPCHSSSETPRWNREFLNTTSLQ*CLQPRS Trigger: ACTTCTAGGTTGCAGACATCACTGGAGGGATGTTGT...GTTGAGAAATTCCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| 3UTR-3UTR CCA 90 bp | ATGTGGTTGGCAGGAATTGAACTCAGGAACTCTGAAAGAGCAGTCAGTGCTCTTCTAGAAGTGATTCTGTaGAACCCGCAGCACACTAAG | + |
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Preference number: 2 (lower is better) Translates to: MWLAGIELRNSERAVSALLEVIL*NPQHTK Trigger: CTTAGTGTGCTGCGGGTTCCACAGAATCACTTCTAG...AAGAGCACTGACTGCTCTTTCAGAGTTCCTGAGTTCAATTCCTGCCAACCACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| 3UTR-3UTR CCA 90 bp | TACCATATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGAATTTCCTAGAAGTGATTCTGTaGAACCCGCAGCACACTAAG | + |
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Preference number: 2 (lower is better) Translates to: YHILVTVHLRHHAGTGNFLEVIL*NPQHTK Trigger: CTTAGTGTGCTGCGGGTTCCACAGAATCACTTCTAG...GAAATTCCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATATGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| 3UTR-3UTR TCA 90 bp | AATCTTTACCATATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGTTTCTCTCTGGACACTaGGTGAGATGGGTACTAACA | + |
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Preference number: 2 (lower is better) Translates to: NLYHILVTVHLRHHAGTGFLSGH*VRWVLT Trigger: TGTTAGTACCCATCTCACTCAGTGTCCAGAGAGAAA...CCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATATGGTAAAGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| 3UTR-3UTR CCA 90 bp | TACCATATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGAATTTCACTCATATTTCTCTCTaGACACTGAGTGAGATGGGT | + |
|
Preference number: 2 (lower is better) Translates to: YHILVTVHLRHHAGTGNFTHISL*TLSEMG Trigger: ACCCATCTCACTCAGTGTCCAGAGAGAAATATGAGT...GAAATTCCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATATGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| 3UTR CAA 90 bp | GATAACATTACAGATGGTTGTAAGCCACCATGTGGTTGGCAGGAATaGAACTCAGGAACTCTGAAAGAGCAGTCAGTGCTCTTAATTGCT | + |
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Preference number: 2 (lower is better) Translates to: DNITDGCKPPCGWQE*NSGTLKEQSVLLIA Trigger: AGCAATTAAGAGCACTGACTGCTCTTTCAGAGTTCCTGAGTTCAATTCCTGCCAACCACATGGTGGCTTACAACCATCTGTAATGTTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| 3UTR-3UTR TCA 90 bp | TACCATATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGAATTTCGGAACAGCTTCAGACTaGTATACATTCTCCTTAGAT | + |
|
Preference number: 2 (lower is better) Translates to: YHILVTVHLRHHAGTGNFGTASD*YTFSLD Trigger: ATCTAAGGAGAATGTATATCAGTCTGAAGCTGTTCC...GAAATTCCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATATGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| 3UTR-3UTR TCA 90 bp | TTCAGACTGATATACATTCTCCTTAGATCCACTCATCAGAGATGTTTTGCAGCTACAACATCCCTCCAGTaGTGTCTGCAACCTAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: FRLIYILLRSTHQRCFAATTSLQ*CLQPRS Trigger: ACTTCTAGGTTGCAGACATCACTGGAGGGATGTTGT...AGCTGCAAAACATCTCTGATGAGTGGATCTAAGGAGAATGTATATCAGTCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| 3UTR-3UTR CAA 90 bp | GCACAATGCAGTATGCTGGCTTGGTGCCCTGAGTGCTCCATGATACAGATGACTTTTACTCCCAGCACTTaGGGAGGTGGATCTCTGAGT | + |
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Preference number: 3 (lower is better) Translates to: AQCSMLAWCPECSMIQMTFTPST*GGGSLS Trigger: ACTCAGAGATCCACCTCCCAAAGTGCTGGGAGTAAA...AGTCATCTGTATCATGGAGCACTCAGGGCACCAAGCCAGCATACTGCATTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| 3UTR TCA 72 bp | GAAGTGATTCTGTGGAACCCGCAGCACACTAAGGAGTaGTGGTCTGTGATGGTCCAGGGACTCATATTTCTC | + |
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Preference number: 3 (lower is better) Translates to: EVILWNPQHTKE*WSVMVQGLIFL Trigger: GAGAAATATGAGTCCCTGGACCATCACAGACCATCACTCCTTAGTGTGCTGCGGGTTCCACAGAATCACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| 3UTR CCA 72 bp | CCATATCCTTGTCACAGTTCATCTGAGACACCACGCTaGAACAGGGAATTTCTCAACTCCCGAGAAAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PYPCHSSSETPR*NREFLNSRERR Trigger: TCTCCTTTCTCGGGAGTTGAGAAATTCCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| 3UTR-3UTR CAA 90 bp | TATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGAATTTCTCAACTGTGGTTGGCAGGAATaGAACTCAGGAACTCTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: YPCHSSSETPRWNREFLNCGWQE*NSGTLK Trigger: TTTCAGAGTTCCTGAGTTCAATTCCTGCCAACCACA...GTTGAGAAATTCCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| 3UTR TCA 72 bp | GTGATGGTCCAGGGACTCATATTTCTCTCTGGACACTaGGTGAGATGGGTACTAACAAATCTTTCTTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: VMVQGLIFLSGH*VRWVLTNLSSL Trigger: CAGGGAAGAAAGATTTGTTAGTACCCATCTCACTCAGTGTCCAGAGAGAAATATGAGTCCCTGGACCATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| 3UTR TCA 72 bp | AAACCAATCTTTACCATATCCTTGTCACAGTTCATCTaGGACACCACGCTGGAACAGGGAATTTCTCAACTC | + |
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Preference number: 3 (lower is better) Translates to: KPIFTISLSQFI*DTTLEQGISQL Trigger: GAGTTGAGAAATTCCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATATGGTAAAGATTGGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| 3UTR CAA 72 bp | GTTAGGTGTGGTGGCCACACCTTTACTCCCAGCACTTaGGGAGGTGGATCTCTGAGTTCGCGGCCAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: VRCGGHTFTPST*GGGSLSSRPAW Trigger: CCAGGCTGGCCGCGAACTCAGAGATCCACCTCCCAAAGTGCTGGGAGTAAAGGTGTGGCCACCACACCTAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR GCA 90 bp | ACTTTGGGAGGTGGATCTCTGAGTTCGCGGCCAGCCTGGTCCATATATCCAGTTGGAGCCGGGCTCGTGTaGTGTGTCTGCAGGCTTATC | + |
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Preference number: 4 (lower is better) Translates to: TLGGGSLSSRPAWSIYPVGAGLV*CVCRLI Trigger: GATAAGCCTGCAGACACAGCACACGAGCCCGGCTCC...AACTGGATATATGGACCAGGCTGGCCGCGAACTCAGAGATCCACCTCCCAAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR GCA 90 bp | GCACAATGCAGTATGCTGGCTTGGTGCCCTGAGTGCTCCATGATACAGATGACTGGAGCCGGGCTCGTGTaGTGTGTCTGCAGGCTTATC | + |
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Preference number: 4 (lower is better) Translates to: AQCSMLAWCPECSMIQMTGAGLV*CVCRLI Trigger: GATAAGCCTGCAGACACAGCACACGAGCCCGGCTCC...AGTCATCTGTATCATGGAGCACTCAGGGCACCAAGCCAGCATACTGCATTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR TCA 90 bp | CACTTTGGGAGGTGGATCTCTGAGTTCGCGGCCAGCCTGGTCCATATATCCAGTACAGCTATGTGGTCTTaGTCCAGGATGGTGAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: HFGRWISEFAASLVHISSTAMWS*SRMVRA Trigger: TGCCCTCACCATCCTGGATCAAGACCACATAGCTGT...ACTGGATATATGGACCAGGCTGGCCGCGAACTCAGAGATCCACCTCCCAAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR TCA 90 bp | ACTTTGGGAGGTGGATCTCTGAGTTCGCGGCCAGCCTGGTCCATATATCCAGTTGCACTCCTTAGAAGCTaGAAGTGGAGGTCCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: TLGGGSLSSRPAWSIYPVALLRS*KWRSQD Trigger: GTCCTGGGACCTCCACTTTCAGCTTCTAAGGAGTGC...AACTGGATATATGGACCAGGCTGGCCGCGAACTCAGAGATCCACCTCCCAAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR TCA 90 bp | ACTTTGGGAGGTGGATCTCTGAGTTCGCGGCCAGCCTGGTCCATATATCCAGTTCTTGATCCAGGATGGTaGGGGCAACACCATTTCGAA | + |
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Preference number: 4 (lower is better) Translates to: TLGGGSLSSRPAWSIYPVLDPGW*GQHHFE Trigger: TTCGAAATGGTGTTGCCCTCACCATCCTGGATCAAG...AACTGGATATATGGACCAGGCTGGCCGCGAACTCAGAGATCCACCTCCCAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR TCA 90 bp | GCACAATGCAGTATGCTGGCTTGGTGCCCTGAGTGCTCCATGATACAGATGACTACAGCTATGTGGTCTTaGTCCAGGATGGTGAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: AQCSMLAWCPECSMIQMTTAMWS*SRMVRA Trigger: TGCCCTCACCATCCTGGATCAAGACCACATAGCTGT...AGTCATCTGTATCATGGAGCACTCAGGGCACCAAGCCAGCATACTGCATTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR TCA 90 bp | GCACAATGCAGTATGCTGGCTTGGTGCCCTGAGTGCTCCATGATACAGATGACTAAGTGGGGCACAGAATaGGTGCCTGACTCTTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: AQCSMLAWCPECSMIQMTKWGTE*VPDSCV Trigger: CACACAAGAGTCAGGCACTCATTCTGTGCCCCACTT...AGTCATCTGTATCATGGAGCACTCAGGGCACCAAGCCAGCATACTGCATTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR TCA 90 bp | AATCTTTACCATATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGTGGTGCCACAGGACATaGGGTCACAGGGAAGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: NLYHILVTVHLRHHAGTGWCHRT*GHREGA Trigger: GGCTCCTTCCCTGTGACCTCATGTCCTGTGGCACCA...CCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATATGGTAAAGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR GCA 90 bp | CACTTTGGGAGGTGGATCTCTGAGTTCGCGGCCAGCCTGGTCCATATATCCAGTCACAGCTGTAACATCTaGACATCTGTGTGCTCTAGG | + |
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Preference number: 4 (lower is better) Translates to: HFGRWISEFAASLVHISSHSCNI*TSVCSR Trigger: CCTAGAGCACACAGATGTGCAGATGTTACAGCTGTG...ACTGGATATATGGACCAGGCTGGCCGCGAACTCAGAGATCCACCTCCCAAAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR GCA 90 bp | AATCTTTACCATATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGGGGATGTCCTTCAAGTaGGGCAGGAGGAAGGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: NLYHILVTVHLRHHAGTGGMSFK*GRRKGS Trigger: TGAGCCCTTCCTCCTGCCGCACTTGAAGGACATCCC...CCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATATGGTAAAGATT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR GCA 90 bp | ATGTGGTTGGCAGGAATTGAACTCAGGAACTCTGAAAGAGCAGTCAGTGCTCTTGGGATGTCCTTCAAGTaGGGCAGGAGGAAGGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: MWLAGIELRNSERAVSALGMSFK*GRRKGS Trigger: TGAGCCCTTCCTCCTGCCGCACTTGAAGGACATCCC...AAGAGCACTGACTGCTCTTTCAGAGTTCCTGAGTTCAATTCCTGCCAACCACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR GCA 90 bp | GCACAATGCAGTATGCTGGCTTGGTGCCCTGAGTGCTCCATGATACAGATGACTCCTGACTCTTGTGTGTaGTTGAGTTTTCCAAGAGCG | + |
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Preference number: 4 (lower is better) Translates to: AQCSMLAWCPECSMIQMTPDSCV*LSFPRA Trigger: CGCTCTTGGAAAACTCAAGCACACACAAGAGTCAGG...AGTCATCTGTATCATGGAGCACTCAGGGCACCAAGCCAGCATACTGCATTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR GCA 90 bp | CACTTTGGGAGGTGGATCTCTGAGTTCGCGGCCAGCCTGGTCCATATATCCAGTAGTACAGTCCTCTACTaGTCTTCTCCCGATTTAATC | + |
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Preference number: 4 (lower is better) Translates to: HFGRWISEFAASLVHISSSTVLY*SSPDLI Trigger: GATTAAATCGGGAGAAGAGCAGTAGAGGACTGTACT...ACTGGATATATGGACCAGGCTGGCCGCGAACTCAGAGATCCACCTCCCAAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR CCA 90 bp | ATGTGGTTGGCAGGAATTGAACTCAGGAACTCTGAAAGAGCAGTCAGTGCTCTTACCAGAGCTGCCCACTaGTTCCTTGTGGCAGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: MWLAGIELRNSERAVSALTRAAH*FLVAAL Trigger: AAGAGCTGCCACAAGGAACCAGTGGGCAGCTCTGGT...AAGAGCACTGACTGCTCTTTCAGAGTTCCTGAGTTCAATTCCTGCCAACCACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR CCA 90 bp | AATCTTTACCATATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGAATCTGGCTCACGGTTaGAGGGTTCACTCCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: NLYHILVTVHLRHHAGTGNLAHG*RVHSRE Trigger: CTCCCTGGAGTGAACCCTCCAACCGTGAGCCAGATT...CCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATATGGTAAAGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR CCA 90 bp | TATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGAATTTCTCAACAATCTGGCTCACGGTTaGAGGGTTCACTCCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: YPCHSSSETPRWNREFLNNLAHG*RVHSRE Trigger: CTCCCTGGAGTGAACCCTCCAACCGTGAGCCAGATT...GTTGAGAAATTCCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR CCA 90 bp | GCACAATGCAGTATGCTGGCTTGGTGCCCTGAGTGCTCCATGATACAGATGACTATCCAATCCATAATCTaGCTCACGGTTGGAGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: AQCSMLAWCPECSMIQMTIQSII*LTVGGF Trigger: GAACCCTCCAACCGTGAGCCAGATTATGGATTGGAT...AGTCATCTGTATCATGGAGCACTCAGGGCACCAAGCCAGCATACTGCATTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR TCA 90 bp | TATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGAATTTCTCAACAAGTGGGGCACAGAATaGGTGCCTGACTCTTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: YPCHSSSETPRWNREFLNKWGTE*VPDSCV Trigger: CACACAAGAGTCAGGCACTCATTCTGTGCCCCACTT...GTTGAGAAATTCCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR TCA 90 bp | GTGAGATGGGTACTAACAAATCTTTCTTCCCTGGACGAACAGGAAGATTCATATTGGTGCCACAGGACATaGGGTCACAGGGAAGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: VRWVLTNLSSLDEQEDSYWCHRT*GHREGA Trigger: GGCTCCTTCCCTGTGACCTCATGTCCTGTGGCACCA...ATATGAATCTTCCTGTTCGTCCAGGGAAGAAAGATTTGTTAGTACCCATCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR CCA 90 bp | AATCTTTACCATATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGGATTCGATGTTCTGCTaGGGCTCTACAAGCAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NLYHILVTVHLRHHAGTGDSMFC*GSTSKA Trigger: GGCCTTGCTTGTAGAGCCCCAGCAGAACATCGAATC...CCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATATGGTAAAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR CCA 90 bp | TACCATATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGAATTTCGATTCGATGTTCTGCTaGGGCTCTACAAGCAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YHILVTVHLRHHAGTGNFDSMFC*GSTSKA Trigger: GGCCTTGCTTGTAGAGCCCCAGCAGAACATCGAATC...GAAATTCCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATATGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| 3UTR CAA 72 bp | ACAGATGGTTGTAAGCCACCATGTGGTTGGCAGGAATaGAACTCAGGAACTCTGAAAGAGCAGTCAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCKPPCGWQE*NSGTLKEQSVL Trigger: GAGCACTGACTGCTCTTTCAGAGTTCCTGAGTTCAATTCCTGCCAACCACATGGTGGCTTACAACCATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR TCA 90 bp | AATCTTTACCATATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGACCGCCAGACACAACTaGCTTGAGCATCAATGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NLYHILVTVHLRHHAGTGTARHN*LEHQCS Trigger: AGAGCATTGATGCTCAAGTCAGTTGTGTCTGGCGGT...CCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATATGGTAAAGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR TCA 90 bp | TATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGAATTTCTCAACACTCTTGTGTGTGCTTaGGTTTTCCAAGAGCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YPCHSSSETPRWNREFLNTLVCA*VFQERL Trigger: CAGGCGCTCTTGGAAAACTCAAGCACACACAAGAGT...GTTGAGAAATTCCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGGACTCATATTTCTCTCTGGACACTGAGTGAGATGGGTACTAACAAATCTTCTCCTAAGAGTTCTTaGCTGCTCTGCACCGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGTHISLWTLSEMGTNKSSPKSS*LLCTGG Trigger: TCCTCCGGTGCAGAGCAGTCAAGAACTCTTAGGAGA...AGATTTGTTAGTACCCATCTCACTCAGTGTCCAGAGAGAAATATGAGTCCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR GCA 90 bp | TACCATATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGAATTTCTCCCGATTTAATCTCTaGAGCTCCCGGAAGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: YHILVTVHLRHHAGTGNFSRFNL*SSRKLT Trigger: AGTCAGCTTCCGGGAGCTGCAGAGATTAAATCGGGA...GAAATTCCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATATGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR GCA 90 bp | GCACAATGCAGTATGCTGGCTTGGTGCCCTGAGTGCTCCATGATACAGATGACTAGTACAGTCCTCTACTaGTCTTCTCCCGATTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: AQCSMLAWCPECSMIQMTSTVLY*SSPDLI Trigger: GATTAAATCGGGAGAAGAGCAGTAGAGGACTGTACT...AGTCATCTGTATCATGGAGCACTCAGGGCACCAAGCCAGCATACTGCATTGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR CCA 90 bp | AAAATATATATCCATCAAGTTAGGTGTGGTGGCCACACCTTTACTCCCAGCACTACCAGAGCTGCCCACTaGTTCCTTGTGGCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KIYIHQVRCGGHTFTPSTTRAAH*FLVAAL Trigger: AAGAGCTGCCACAAGGAACCAGTGGGCAGCTCTGGT...AGTGCTGGGAGTAAAGGTGTGGCCACCACACCTAACTTGATGGATATATATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTGGGAGGTGGATCTCTGAGTTCGCGGCCAGCCTGGTCCATATATCCAGTTAGGAAATACAAATACTaGAGAAACAGCGTGACATGC | + |
|
Preference number: 4 (lower is better) Translates to: TLGGGSLSSRPAWSIYPVRKYKY*RNSVTC Trigger: GCATGTCACGCTGTTTCTCCAGTATTTGTATTTCCT...AACTGGATATATGGACCAGGCTGGCCGCGAACTCAGAGATCCACCTCCCAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGGACTCATATTTCTCTCTGGACACTGAGTGAGATGGGTACTAACAAATCTACCGCCAGACACAACTaGCTTGAGCATCAATGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGTHISLWTLSEMGTNKSTARHN*LEHQCS Trigger: AGAGCATTGATGCTCAAGTCAGTTGTGTCTGGCGGT...AGATTTGTTAGTACCCATCTCACTCAGTGTCCAGAGAGAAATATGAGTCCCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR TCA 90 bp | GTGAGATGGGTACTAACAAATCTTTCTTCCCTGGACGAACAGGAAGATTCATATGCACTCCTTAGAAGCTaGAAGTGGAGGTCCCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VRWVLTNLSSLDEQEDSYALLRS*KWRSQD Trigger: GTCCTGGGACCTCCACTTTCAGCTTCTAAGGAGTGC...ATATGAATCTTCCTGTTCGTCCAGGGAAGAAAGATTTGTTAGTACCCATCTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTGGGAGGTGGATCTCTGAGTTCGCGGCCAGCCTGGTCCATATATCCAGTTTTTTTCCATGTAGCATaGATAGTACTTCCCCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: TLGGGSLSSRPAWSIYPVFFHVA*IVLPHD Trigger: ATCATGGGGAAGTACTATTCATGCTACATGGAAAAA...AACTGGATATATGGACCAGGCTGGCCGCGAACTCAGAGATCCACCTCCCAAAGT 47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR GCA 90 bp | TATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGAATTTCTCAACATCTGCACATCTGTGTaGTCTAGGGCAATCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: YPCHSSSETPRWNREFLNICTSV*SRAISI Trigger: GATGGAGATTGCCCTAGAGCACACAGATGTGCAGAT...GTTGAGAAATTCCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR GCA 90 bp | ATGTGGTTGGCAGGAATTGAACTCAGGAACTCTGAAAGAGCAGTCAGTGCTCTTGCTGACTATCTTCACTaGAGTTCCCATCTTCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MWLAGIELRNSERAVSALADYLH*SSHLQV Trigger: GACCTGAAGATGGGAACTGCAGTGAAGATAGTCAGC...AAGAGCACTGACTGCTCTTTCAGAGTTCCTGAGTTCAATTCCTGCCAACCACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR CCA 90 bp | TATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGAATTTCTCAACATCCAATCCATAATCTaGCTCACGGTTGGAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YPCHSSSETPRWNREFLNIQSII*LTVGGF Trigger: GAACCCTCCAACCGTGAGCCAGATTATGGATTGGAT...GTTGAGAAATTCCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR TCA 90 bp | GTGAGATGGGTACTAACAAATCTTTCTTCCCTGGACGAACAGGAAGATTCATATTCTCCTAAGAGTTCTTaGCTGCTCTGCACCGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VRWVLTNLSSLDEQEDSYSPKSS*LLCTGG Trigger: TCCTCCGGTGCAGAGCAGTCAAGAACTCTTAGGAGA...ATATGAATCTTCCTGTTCGTCCAGGGAAGAAAGATTTGTTAGTACCCATCTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR GCA 90 bp | AAAATATATATCCATCAAGTTAGGTGTGGTGGCCACACCTTTACTCCCAGCACTTCGGCTTTGTCAGTCTaGTCTACACCTAGGAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: KIYIHQVRCGGHTFTPSTSALSV*STPRNP Trigger: GGGATTCCTAGGTGTAGAGCAGACTGACAAAGCCGA...AGTGCTGGGAGTAAAGGTGTGGCCACCACACCTAACTTGATGGATATATATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGGACTCATATTTCTCTCTGGACACTGAGTGAGATGGGTACTAACAAATCTATCTGCACATCTGTGTaGTCTAGGGCAATCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PGTHISLWTLSEMGTNKSICTSV*SRAISI Trigger: GATGGAGATTGCCCTAGAGCACACAGATGTGCAGAT...AGATTTGTTAGTACCCATCTCACTCAGTGTCCAGAGAGAAATATGAGTCCCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGGACTCATATTTCTCTCTGGACACTGAGTGAGATGGGTACTAACAAATCTGCTGACTATCTTCACTaGAGTTCCCATCTTCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGTHISLWTLSEMGTNKSADYLH*SSHLQV Trigger: GACCTGAAGATGGGAACTGCAGTGAAGATAGTCAGC...AGATTTGTTAGTACCCATCTCACTCAGTGTCCAGAGAGAAATATGAGTCCCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR TCA 90 bp | ATGTGGTTGGCAGGAATTGAACTCAGGAACTCTGAAAGAGCAGTCAGTGCTCTTTCTATGGACTTCAGCTaGCAGTGTAGCTTTGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: MWLAGIELRNSERAVSALSMDFS*QCSFEY Trigger: GTATTCAAAGCTACACTGTCAGCTGAAGTCCATAGA...AAGAGCACTGACTGCTCTTTCAGAGTTCCTGAGTTCAATTCCTGCCAACCACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR TCA 90 bp | AATCTTTACCATATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGTCTATGGACTTCAGCTaGCAGTGTAGCTTTGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: NLYHILVTVHLRHHAGTGSMDFS*QCSFEY Trigger: GTATTCAAAGCTACACTGTCAGCTGAAGTCCATAGA...CCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATATGGTAAAGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR TCA 90 bp | GTGAGATGGGTACTAACAAATCTTTCTTCCCTGGACGAACAGGAAGATTCATATAATAGTACTTCCCCATaGTACCAGAGCTGCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VRWVLTNLSSLDEQEDSYNSTSP*YQSCPL Trigger: CAGTGGGCAGCTCTGGTATCATGGGGAAGTACTATT...ATATGAATCTTCCTGTTCGTCCAGGGAAGAAAGATTTGTTAGTACCCATCTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR CCA 90 bp | TATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGAATTTCTCAACACTGAGTGGATTCTATaGACTTCAGCTGACAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: YPCHSSSETPRWNREFLNTEWIL*TSADSV Trigger: TACACTGTCAGCTGAAGTCCATAGAATCCACTCAGT...GTTGAGAAATTCCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGACTGATATACATTCTCCTTAGATCCACTCATCAGAGATGTTTTGCAGCTAATAGTACTTCCCCATaGTACCAGAGCTGCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: FRLIYILLRSTHQRCFAANSTSP*YQSCPL Trigger: CAGTGGGCAGCTCTGGTATCATGGGGAAGTACTATT...AGCTGCAAAACATCTCTGATGAGTGGATCTAAGGAGAATGTATATCAGTCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR TCA 90 bp | AATCTTTACCATATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGTCTCCAATTATAGTATaGAAGGCAGGTGTTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: NLYHILVTVHLRHHAGTGSPIIV*KAGVDF Trigger: GAAGTCAACACCTGCCTTTCATACTATAATTGGAGA...CCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATATGGTAAAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR TCA 90 bp | TACCATATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGAATTTCGGTCCAAAGCCATTCTaGACAATTTCAATTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YHILVTVHLRHHAGTGNFGPKPF*TISICS Trigger: AGAGCAAATTGAAATTGTTCAGAATGGCTTTGGACC...GAAATTCCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATATGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGACTGATATACATTCTCCTTAGATCCACTCATCAGAGATGTTTTGCAGCTTCGGCTTTGTCAGTCTaGTCTACACCTAGGAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: FRLIYILLRSTHQRCFAASALSV*STPRNP Trigger: GGGATTCCTAGGTGTAGAGCAGACTGACAAAGCCGA...AGCTGCAAAACATCTCTGATGAGTGGATCTAAGGAGAATGTATATCAGTCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGACTGATATACATTCTCCTTAGATCCACTCATCAGAGATGTTTTGCAGCTTCCCGATTTAATCTCTaGAGCTCCCGGAAGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: FRLIYILLRSTHQRCFAASRFNL*SSRKLT Trigger: AGTCAGCTTCCGGGAGCTGCAGAGATTAAATCGGGA...AGCTGCAAAACATCTCTGATGAGTGGATCTAAGGAGAATGTATATCAGTCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR CCA 90 bp | AATCTTTACCATATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGAGGAAATACAAATACTaGAGAAACAGCGTGACATGC | + |
|
Preference number: 4 (lower is better) Translates to: NLYHILVTVHLRHHAGTGRKYKY*RNSVTC Trigger: GCATGTCACGCTGTTTCTCCAGTATTTGTATTTCCT...CCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATATGGTAAAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR TCA 90 bp | ATGTGGTTGGCAGGAATTGAACTCAGGAACTCTGAAAGAGCAGTCAGTGCTCTTTTTTTCCATGTAGCATaGATAGTACTTCCCCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: MWLAGIELRNSERAVSALFFHVA*IVLPHD Trigger: ATCATGGGGAAGTACTATTCATGCTACATGGAAAAA...AAGAGCACTGACTGCTCTTTCAGAGTTCCTGAGTTCAATTCCTGCCAACCACAT 42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR TCA 90 bp | ATGTGGTTGGCAGGAATTGAACTCAGGAACTCTGAAAGAGCAGTCAGTGCTCTTTTATCATTTAACTGCTaGCTATCTTCACTGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: MWLAGIELRNSERAVSALLSFNC*LSSLQF Trigger: GAACTGCAGTGAAGATAGTCAGCAGTTAAATGATAA...AAGAGCACTGACTGCTCTTTCAGAGTTCCTGAGTTCAATTCCTGCCAACCACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR GCA 90 bp | AATCTTTACCATATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGGTAAGAGTGTGTATTTaGTTAAGCTGTGTGATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NLYHILVTVHLRHHAGTGVRVCI*LSCVIC Trigger: GCAAATCACACAGCTTAAGCAAATACACACTCTTAC...CCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATATGGTAAAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR GCA 90 bp | AATCTTTACCATATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGTTTCCCATCCACACGTaGAGTAAAATTTGGTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: NLYHILVTVHLRHHAGTGFPIHT*SKIWFN Trigger: GTTAAACCAAATTTTACTGCACGTGTGGATGGGAAA...CCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATATGGTAAAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGACTGATATACATTCTCCTTAGATCCACTCATCAGAGATGTTTTGCAGCTCCTGACTCTTGTGTGTaGTTGAGTTTTCCAAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: FRLIYILLRSTHQRCFAAPDSCV*LSFPRA Trigger: CGCTCTTGGAAAACTCAAGCACACACAAGAGTCAGG...AGCTGCAAAACATCTCTGATGAGTGGATCTAAGGAGAATGTATATCAGTCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR TCA 90 bp | AAAATATATATCCATCAAGTTAGGTGTGGTGGCCACACCTTTACTCCCAGCACTTTATCATTTAACTGCTaGCTATCTTCACTGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KIYIHQVRCGGHTFTPSTLSFNC*LSSLQF Trigger: GAACTGCAGTGAAGATAGTCAGCAGTTAAATGATAA...AGTGCTGGGAGTAAAGGTGTGGCCACCACACCTAACTTGATGGATATATATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGACTGATATACATTCTCCTTAGATCCACTCATCAGAGATGTTTTGCAGCTTCTCCAATTATAGTATaGAAGGCAGGTGTTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: FRLIYILLRSTHQRCFAASPIIV*KAGVDF Trigger: GAAGTCAACACCTGCCTTTCATACTATAATTGGAGA...AGCTGCAAAACATCTCTGATGAGTGGATCTAAGGAGAATGTATATCAGTCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGACTGATATACATTCTCCTTAGATCCACTCATCAGAGATGTTTTGCAGCTGGTCCAAAGCCATTCTaGACAATTTCAATTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FRLIYILLRSTHQRCFAAGPKPF*TISICS Trigger: AGAGCAAATTGAAATTGTTCAGAATGGCTTTGGACC...AGCTGCAAAACATCTCTGATGAGTGGATCTAAGGAGAATGTATATCAGTCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS-3UTR GCA 90 bp | GTGAGATGGGTACTAACAAATCTTTCTTCCCTGGACGAACAGGAAGATTCATATGTAAGAGTGTGTATTTaGTTAAGCTGTGTGATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VRWVLTNLSSLDEQEDSYVRVCI*LSCVIC Trigger: GCAAATCACACAGCTTAAGCAAATACACACTCTTAC...ATATGAATCTTCCTGTTCGTCCAGGGAAGAAAGATTTGTTAGTACCCATCTCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS GCA 90 bp | GTCCTGCCGCTGTCCGTCACTAGGAACTGGTCGGCTTTGTCAGTCTaGTCTACACCTAGGAATCCCTCAGGCCCGGCGCCTAAGACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VLPLSVTRNWSALSV*STPRNPSGPAPKTP Trigger: TGGAGTCTTAGGCGCCGGGCCTGAGGGATTCCTAGGTGTAGAGCAGACTGACAAAGCCGACCAGTTCCTAGTGACGGACAGCGGCAGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS GCA 90 bp | TGCCCAACGGTTTCTGGTCAGAAACCTTGTAAAGGACGACGGTCCTaGCGCTGTCCGTCACTAGGAACTGGTCGGCTTTGTCAGTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: CPTVSGQKPCKGRRS*RCPSLGTGRLCQSA Trigger: AGCAGACTGACAAAGCCGACCAGTTCCTAGTGACGGACAGCGGCAGGACCGTCGTCCTTTACAAGGTTTCTGACCAGAAACCGTTGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS GCA 90 bp | GACCACACGATCACTTCCTCATCAGGTATGACAGATTCGATGTTCTaGTGGGGCTCTACAAGCAAGGCCTCTAGCCCACGAGCAGCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: DHTITSSSGMTDSMF*WGSTSKASSPRAAP Trigger: AGGCGCTGCTCGTGGGCTAGAGGCCTTGCTTGTAGAGCCCCAGCAGAACATCGAATCTGTCATACCTGATGAGGAAGTGATCGTGTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS TCA 90 bp | ATGTCCTTCAAGTGCGGCAGGAGGAAGGGCTCACTGTATGCGGAATaGAGGACTGCATTTAGCAGAGCTGCTCGCTTTGGTGCCACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: MSFKCGRRKGSLYAE*RTAFSRAARFGATG Trigger: TCCTGTGGCACCAAAGCGAGCAGCTCTGCTAAATGCAGTCCTTCATTCCGCATACAGTGAGCCCTTCCTCCTGCCGCACTTGAAGGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
||
| CDS GCA 90 bp | ACACAGCAGGGCATGTTATACTCTGACCTTGCTTCACCGACCAGCTaGCCAACGGTTTCTGGTCAGAAACCTTGTAAAGGACGACGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TQQGMLYSDLASPTS*PTVSGQKPCKGRRS Trigger: GGACCGTCGTCCTTTACAAGGTTTCTGACCAGAAACCGTTGGGCAGCTGGTCGGTGAAGCAAGGTCAGAGTATAACATGCCCTGCTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR CAA 90 bp | ACTTTGGGAGGTGGATCTCTGAGTTCGCGGCCAGCCTGGTCCATATATCCAGTTTGTTATACTCTGACCTaGCTTCACCGACCAGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: TLGGGSLSSRPAWSIYPVCYTLT*LHRPAA Trigger: GGCAGCTGGTCGGTGAAGCAAGGTCAGAGTATAACA...AACTGGATATATGGACCAGGCTGGCCGCGAACTCAGAGATCCACCTCCCAAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR CAA 90 bp | CACTTTGGGAGGTGGATCTCTGAGTTCGCGGCCAGCCTGGTCCATATATCCAGTGACTCTTGTGTGTGCTaGAGTTTTCCAAGAGCGCCT | + |
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Preference number: 5 (lower is better) Translates to: HFGRWISEFAASLVHISSDSCVC*SFPRAP Trigger: AGGCGCTCTTGGAAAACTCAAGCACACACAAGAGTC...ACTGGATATATGGACCAGGCTGGCCGCGAACTCAGAGATCCACCTCCCAAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR CAA 90 bp | TATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGAATTTCTCAACAGGAACTGGTCGGCTTaGTCAGTCTGCTCTACACCT | + |
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Preference number: 5 (lower is better) Translates to: YPCHSSSETPRWNREFLNRNWSA*SVCSTP Trigger: AGGTGTAGAGCAGACTGACAAAGCCGACCAGTTCCT...GTTGAGAAATTCCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR CAA 90 bp | AATCTTTACCATATCCTTGTCACAGTTCATCTGAGACACCACGCTGGAACAGGGAGGAACTGGTCGGCTTaGTCAGTCTGCTCTACACCT | + |
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Preference number: 5 (lower is better) Translates to: NLYHILVTVHLRHHAGTGRNWSA*SVCSTP Trigger: AGGTGTAGAGCAGACTGACAAAGCCGACCAGTTCCT...CCCTGTTCCAGCGTGGTGTCTCAGATGAACTGTGACAAGGATATGGTAAAGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS TCA 90 bp | CAGTACACTTCAAATAGAGGAAATACAAATACTGGAGAAACAGCGTaGCATGCTTCGCAGGGATGTCCTTCAAGTGCGGCAGGAGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: QYTSNRGNTNTGETA*HASQGCPSSAAGGR Trigger: CCTTCCTCCTGCCGCACTTGAAGGACATCCCTGCGAAGCATGTCACGCTGTTTCTCCAGTATTTGTATTTCCTCTATTTGAAGTGTACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR CAA 90 bp | CCAGGGACTCATATTTCTCTCTGGACACTGAGTGAGATGGGTACTAACAAATCTTGTTATACTCTGACCTaGCTTCACCGACCAGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: PGTHISLWTLSEMGTNKSCYTLT*LHRPAA Trigger: GGCAGCTGGTCGGTGAAGCAAGGTCAGAGTATAACA...AGATTTGTTAGTACCCATCTCACTCAGTGTCCAGAGAGAAATATGAGTCCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR CAA 90 bp | CACTTTGGGAGGTGGATCTCTGAGTTCGCGGCCAGCCTGGTCCATATATCCAGTTTCCTTTTTCTCATCTaGTGTGGAATCACTCAAGAA | + |
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Preference number: 5 (lower is better) Translates to: HFGRWISEFAASLVHISSFLFLI*CGITQE Trigger: TTCTTGAGTGATTCCACACAAGATGAGAAAAAGGAA...ACTGGATATATGGACCAGGCTGGCCGCGAACTCAGAGATCCACCTCCCAAAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106757.8 |
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| CDS-3UTR CAA 90 bp | GCACAATGCAGTATGCTGGCTTGGTGCCCTGAGTGCTCCATGATACAGATGACTGACGATTCTTCACACTaGTATGGAATCACAGTTAGA | + |
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Preference number: 5 (lower is better) Translates to: AQCSMLAWCPECSMIQMTDDSSH*YGITVR Trigger: TCTAACTGTGATTCCATACAAGTGTGAAGAATCGTC...AGTCATCTGTATCATGGAGCACTCAGGGCACCAAGCCAGCATACTGCATTGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR CAA 90 bp | CCAGGGACTCATATTTCTCTCTGGACACTGAGTGAGATGGGTACTAACAAATCTGACTCTTGTGTGTGCTaGAGTTTTCCAAGAGCGCCT | + |
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Preference number: 5 (lower is better) Translates to: PGTHISLWTLSEMGTNKSDSCVC*SFPRAP Trigger: AGGCGCTCTTGGAAAACTCAAGCACACACAAGAGTC...AGATTTGTTAGTACCCATCTCACTCAGTGTCCAGAGAGAAATATGAGTCCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR CAA 90 bp | CCAGGGACTCATATTTCTCTCTGGACACTGAGTGAGATGGGTACTAACAAATCTCCAGACACAACTGACTaGAGCATCAATGCTCTAACT | + |
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Preference number: 5 (lower is better) Translates to: PGTHISLWTLSEMGTNKSPDTTD*SINALT Trigger: AGTTAGAGCATTGATGCTCAAGTCAGTTGTGTCTGG...AGATTTGTTAGTACCCATCTCACTCAGTGTCCAGAGAGAAATATGAGTCCCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS GCA 90 bp | GTGCTGTGTCTGCAGGCTTATCATTTAACTGCTGACTATCTTCACTaGAGTTCCCATCTTCAGGTCCAAAGCCATTCTGAACAATTTCAA | + |
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Preference number: 5 (lower is better) Translates to: VLCLQAYHLTADYLH*SSHLQVQSHSEQFQ Trigger: TTGAAATTGTTCAGAATGGCTTTGGACCTGAAGATGGGAACTGCAGTGAAGATAGTCAGCAGTTAAATGATAAGCCTGCAGACACAGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR CAA 90 bp | TTCAGACTGATATACATTCTCCTTAGATCCACTCATCAGAGATGTTTTGCAGCTGACGATTCTTCACACTaGTATGGAATCACAGTTAGA | + |
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Preference number: 5 (lower is better) Translates to: FRLIYILLRSTHQRCFAADDSSH*YGITVR Trigger: TCTAACTGTGATTCCATACAAGTGTGAAGAATCGTC...AGCTGCAAAACATCTCTGATGAGTGGATCTAAGGAGAATGTATATCAGTCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS-3UTR CAA 90 bp | GTGAGATGGGTACTAACAAATCTTTCTTCCCTGGACGAACAGGAAGATTCATATAAAACTGACTCCATGTaGATATTACTGTCTCGAAGA | + |
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Preference number: 5 (lower is better) Translates to: VRWVLTNLSSLDEQEDSYKTDSM*ILLSRR Trigger: TCTTCGAGACAGTAATATCAACATGGAGTCAGTTTT...ATATGAATCTTCCTGTTCGTCCAGGGAAGAAAGATTTGTTAGTACCCATCTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018577.8 |
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| CDS CAA 90 bp | AGGACGACGGTCCTGCCGCTGTCCGTCACTAGGAACTGGTCGGCTTaGTCAGTCTGCTCTACACCTAGGAATCCCTCAGGCCCGGCGCCT | + |
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Preference number: 6 (lower is better) Translates to: RTTVLPLSVTRNWSA*SVCSTPRNPSGPAP Trigger: AGGCGCCGGGCCTGAGGGATTCCTAGGTGTAGAGCAGACTGACAAAGCCGACCAGTTCCTAGTGACGGACAGCGGCAGGACCGTCGTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS GCA 72 bp | CTGTCCGTCACTAGGAACTGGTCGGCTTTGTCAGTCTaGTCTACACCTAGGAATCCCTCAGGCCCGGCGCCT | + |
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Preference number: 6 (lower is better) Translates to: LSVTRNWSALSV*STPRNPSGPAP Trigger: AGGCGCCGGGCCTGAGGGATTCCTAGGTGTAGAGCAGACTGACAAAGCCGACCAGTTCCTAGTGACGGACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS CAA 72 bp | GTCCTGCCGCTGTCCGTCACTAGGAACTGGTCGGCTTaGTCAGTCTGCTCTACACCTAGGAATCCCTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: VLPLSVTRNWSA*SVCSTPRNPSG Trigger: GCCTGAGGGATTCCTAGGTGTAGAGCAGACTGACAAAGCCGACCAGTTCCTAGTGACGGACAGCGGCAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS CCA 72 bp | AGGACGACGGTCCTGCCGCTGTCCGTCACTAGGAACTaGTCGGCTTTGTCAGTCTGCTCTACACCTAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: RTTVLPLSVTRN*SALSVCSTPRN Trigger: ATTCCTAGGTGTAGAGCAGACTGACAAAGCCGACCAGTTCCTAGTGACGGACAGCGGCAGGACCGTCGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS CAA 72 bp | CGGAATGAAGGACTGCATTTAGCAGAGCTGCTCGCTTaGGTGCCACAGGACATGAGGTCACAGGGAAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: RNEGLHLAELLA*VPQDMRSQGRS Trigger: GCTCCTTCCCTGTGACCTCATGTCCTGTGGCACCAAAGCGAGCAGCTCTGCTAAATGCAGTCCTTCATTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS TCA 72 bp | GTCCCAGGACAGCTATGTGGTCTTGATCCAGGATGGTaGGGGCAACACCATTTCGAACACCGCCAGACACAA | + |
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Preference number: 6 (lower is better) Translates to: VPGQLCGLDPGW*GQHHFEHRQTQ Trigger: TTGTGTCTGGCGGTGTTCGAAATGGTGTTGCCCTCACCATCCTGGATCAAGACCACATAGCTGTCCTGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS TCA 72 bp | AAGTGCGGCAGGAGGAAGGGCTCACTGTATGCGGAATaGAGGACTGCATTTAGCAGAGCTGCTCGCTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: KCGRRKGSLYAE*RTAFSRAARFG Trigger: ACCAAAGCGAGCAGCTCTGCTAAATGCAGTCCTTCATTCCGCATACAGTGAGCCCTTCCTCCTGCCGCACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS GCA 72 bp | GTTTCTGGTCAGAAACCTTGTAAAGGACGACGGTCCTaGCGCTGTCCGTCACTAGGAACTGGTCGGCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: VSGQKPCKGRRS*RCPSLGTGRLC Trigger: ACAAAGCCGACCAGTTCCTAGTGACGGACAGCGGCAGGACCGTCGTCCTTTACAAGGTTTCTGACCAGAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS GCA 72 bp | ATCACTTCCTCATCAGGTATGACAGATTCGATGTTCTaGTGGGGCTCTACAAGCAAGGCCTCTAGCCCACGA | + |
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Preference number: 6 (lower is better) Translates to: ITSSSGMTDSMF*WGSTSKASSPR Trigger: TCGTGGGCTAGAGGCCTTGCTTGTAGAGCCCCAGCAGAACATCGAATCTGTCATACCTGATGAGGAAGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS GCA 72 bp | GGCATGTTATACTCTGACCTTGCTTCACCGACCAGCTaGCCAACGGTTTCTGGTCAGAAACCTTGTAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: GMLYSDLASPTS*PTVSGQKPCKG Trigger: TCCTTTACAAGGTTTCTGACCAGAAACCGTTGGGCAGCTGGTCGGTGAAGCAAGGTCAGAGTATAACATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS CAA 90 bp | ATGGTGAGGGCAACACCATTTCGAACACCGCCAGACACAACTGACTaGAGCATCAATGCTCTAACTAACCTCTGGTTTTGTTCTGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: MVRATPFRTPPDTTD*SINALTNLWFCSVS Trigger: TGACACAGAACAAAACCAGAGGTTAGTTAGAGCATTGATGCTCAAGTCAGTTGTGTCTGGCGGTGTTCGAAATGGTGTTGCCCTCACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS TCA 72 bp | TCAAATAGAGGAAATACAAATACTGGAGAAACAGCGTaGCATGCTTCGCAGGGATGTCCTTCAAGTGCGGCA | + |
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Preference number: 6 (lower is better) Translates to: SNRGNTNTGETA*HASQGCPSSAA Trigger: TGCCGCACTTGAAGGACATCCCTGCGAAGCATGTCACGCTGTTTCTCCAGTATTTGTATTTCCTCTATTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS CAA 72 bp | GCAACACCATTTCGAACACCGCCAGACACAACTGACTaGAGCATCAATGCTCTAACTAACCTCTGGTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: ATPFRTPPDTTD*SINALTNLWFC Trigger: ACAAAACCAGAGGTTAGTTAGAGCATTGATGCTCAAGTCAGTTGTGTCTGGCGGTGTTCGAAATGGTGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS GCA 72 bp | CTGCAGGCTTATCATTTAACTGCTGACTATCTTCACTaGAGTTCCCATCTTCAGGTCCAAAGCCATTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: LQAYHLTADYLH*SSHLQVQSHSE Trigger: TTCAGAATGGCTTTGGACCTGAAGATGGGAACTGCAGTGAAGATAGTCAGCAGTTAAATGATAAGCCTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018577.8 ENSMUST00000106757.8 |
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| CDS TCA 72 bp | TTTCTCATCTTGTGTGGAATCACTATAATCAAAAACTaGCTCCATGTTGATATTACTGTCTCGAAGACAGTC | + |
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Preference number: 6 (lower is better) Translates to: FLILCGITIIKN*LHVDITVSKTV Trigger: GACTGTCTTCGAGACAGTAATATCAACATGGAGTCAGTTTTTGATTATAGTGATTCCACACAAGATGAGAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018577.8 |
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