Pregenerated sensors for NOL10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061458Ensembl transcript IDs: ENSMUST00000046011.12
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGACTTCTCCAGGTGGGTAGTGGGCCAGTCAGACCACCAGCACCATaGACACACATCTACACGGAGCCTGGGTGTGATGCCCTTGTGAGA | + |
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Preference number: 1 (lower is better) Translates to: GLLQVGSGPVRPPAP*THIYTEPGCDALVR Trigger: TCTCACAAGGGCATCACACCCAGGCTCCGTGTAGATGTGTGTGCATGGTGCTGGTGGTCTGACTGGCCCACTACCCACCTGGAGAAGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| 3UTR TCA 90 bp | CACCATGCACACACATCTACACGGAGCCTGGGTGTGATGCCCTTGTaGGAATCCATGGGGAGAAGCACAGCGTCTAGTTGCTCGTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: HHAHTSTRSLGVMPL*ESMGRSTASSCSWA Trigger: TGCCCACGAGCAACTAGACGCTGTGCTTCTCCCCATGGATTCTCACAAGGGCATCACACCCAGGCTCCGTGTAGATGTGTGTGCATGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| 3UTR TCA 90 bp | AGGAGGCAGAGGCAAGTGGATCTCTATGAGTTCAAGGCCACAGATTaGATTCCAGGACACCCAGAGCTACACGGAGAAACCCTGACTCAA | + |
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Preference number: 1 (lower is better) Translates to: RRQRQVDLYEFKATD*IPGHPELHGETLTQ Trigger: TTGAGTCAGGGTTTCTCCGTGTAGCTCTGGGTGTCCTGGAATTCAATCTGTGGCCTTGAACTCATAGAGATCCACTTGCCTCTGCCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| 3UTR TCA 90 bp | CCCTTTAACTTCAGCACTCAGGAGGCAGAGGCAAGTGGATCTCTATaGGTTCAAGGCCACAGATTGAATTCCAGGACACCCAGAGCTACA | + |
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Preference number: 1 (lower is better) Translates to: PFNFSTQEAEASGSL*VQGHRLNSRTPRAT Trigger: TGTAGCTCTGGGTGTCCTGGAATTCAATCTGTGGCCTTGAACTCATAGAGATCCACTTGCCTCTGCCTCCTGAGTGCTGAAGTTAAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| 3UTR-3UTR CCA 90 bp | GTCCTGAGGGGCAGAAGACAGTGGGGACAGACACTCTGGCTGGGCCTGGTGGTGGGAGGCAGAGGCAAGTaGATCTCTATGAGTTCAAGG | + |
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Preference number: 2 (lower is better) Translates to: VLRGRRQWGQTLWLGLVVGGRGK*ISMSSR Trigger: CCTTGAACTCATAGAGATCCACTTGCCTCTGCCTCC...CACCACCAGGCCCAGCCAGAGTGTCTGTCCCCACTGTCTTCTGCCCCTCAGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| 3UTR-3UTR TCA 90 bp | CCTGAGGGGCAGAAGACAGTGGGGACAGACACTCTGGCTGGGCCTGGTGGTGCAGTTTCCAGTAGAGGGTaGACTTTTCACTTCATGGAG | + |
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Preference number: 2 (lower is better) Translates to: PEGQKTVGTDTLAGPGGAVSSRG*TFHFME Trigger: CTCCATGAAGTGAAAAGTTCACCCTCTACTGGAAAC...TGCACCACCAGGCCCAGCCAGAGTGTCTGTCCCCACTGTCTTCTGCCCCTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| 3UTR-3UTR GCA 90 bp | CACATAAACAGGGCCACTCAGCAGTCATCATGTGACTCAGTCCTGAGGGGCAGACCTCTGCCTCCCAAGTaGTGGGATCAAAGGCGTGCG | + |
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Preference number: 2 (lower is better) Translates to: HINRATQQSSCDSVLRGRPLPPK*WDQRRA Trigger: CGCACGCCTTTGATCCCAGCACTTGGGAGGCAGAGG...TCTGCCCCTCAGGACTGAGTCACATGATGACTGCTGAGTGGCCCTGTTTATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| 3UTR-3UTR CCA 90 bp | CAAGGCCACAGATTGAATTCCAGGACACCCAGAGCTACACGGAGAAACCCTGACCCTTGTGAGAATCCATaGGGAGAAGCACAGCGTCTA | + |
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Preference number: 2 (lower is better) Translates to: QGHRLNSRTPRATRRNPDPCENP*GEAQRL Trigger: TAGACGCTGTGCTTCTCCCCATGGATTCTCACAAGG...GTCAGGGTTTCTCCGTGTAGCTCTGGGTGTCCTGGAATTCAATCTGTGGCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| 3UTR-3UTR CCA 90 bp | TGGTGCATCCCTTTAACTTCAGCACTCAGGAGGCAGAGGCAAGTGGATCTCTATGAACTTTTCACTTCATaGAGGCCTTTCCAATATCTG | + |
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Preference number: 2 (lower is better) Translates to: WCIPLTSALRRQRQVDLYELFTS*RPFQYL Trigger: CAGATATTGGAAAGGCCTCCATGAAGTGAAAAGTTC...ATAGAGATCCACTTGCCTCTGCCTCCTGAGTGCTGAAGTTAAAGGGATGCACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| 3UTR GCA 72 bp | CAGGTGGGTAGTGGGCCAGTCAGACCACCAGCACCATaGACACACATCTACACGGAGCCTGGGTGTGATGCC | + |
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Preference number: 3 (lower is better) Translates to: QVGSGPVRPPAP*THIYTEPGCDA Trigger: GGCATCACACCCAGGCTCCGTGTAGATGTGTGTGCATGGTGCTGGTGGTCTGACTGGCCCACTACCCACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| 3UTR GCA 72 bp | GACAGTGGGGACAGACACTCTGGCTGGGCCTGGTGGTaGATCCCTTTAACTTCAGCACTCAGGAGGCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: DSGDRHSGWAWW*IPLTSALRRQR Trigger: CCTCTGCCTCCTGAGTGCTGAAGTTAAAGGGATGCACCACCAGGCCCAGCCAGAGTGTCTGTCCCCACTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| 3UTR CCA 72 bp | TTGGAAAAAGCACCCAGGGCCAGGGACTTCTCCAGGTaGGTAGTGGGCCAGTCAGACCACCAGCACCATGCA | + |
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Preference number: 3 (lower is better) Translates to: LEKAPRARDFSR*VVGQSDHQHHA Trigger: TGCATGGTGCTGGTGGTCTGACTGGCCCACTACCCACCTGGAGAAGTCCCTGGCCCTGGGTGCTTTTTCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| 3UTR TCA 72 bp | ACAGGGCCACTCAGCAGTCATCATGTGACTCAGTCCTaGGGGGCAGAAGACAGTGGGGACAGACACTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: TGPLSSHHVTQS*GAEDSGDRHSG Trigger: GCCAGAGTGTCTGTCCCCACTGTCTTCTGCCCCTCAGGACTGAGTCACATGATGACTGCTGAGTGGCCCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| 3UTR CCA 72 bp | TCATCATGTGACTCAGTCCTGAGGGGCAGAAGACAGTaGGGACAGACACTCTGGCTGGGCCTGGTGGTGCAT | + |
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Preference number: 3 (lower is better) Translates to: SSCDSVLRGRRQ*GQTLWLGLVVH Trigger: ATGCACCACCAGGCCCAGCCAGAGTGTCTGTCCCCACTGTCTTCTGCCCCTCAGGACTGAGTCACATGATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| 3UTR TCA 72 bp | CACACATCTACACGGAGCCTGGGTGTGATGCCCTTGTaGGAATCCATGGGGAGAAGCACAGCGTCTAGTTGC | + |
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Preference number: 3 (lower is better) Translates to: HTSTRSLGVMPL*ESMGRSTASSC Trigger: GCAACTAGACGCTGTGCTTCTCCCCATGGATTCTCACAAGGGCATCACACCCAGGCTCCGTGTAGATGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| 3UTR TCA 72 bp | CATGCACATAAACAGGGCCACTCAGCAGTCATCATGTaGCTCAGTCCTGAGGGGCAGAAGACAGTGGGGACA | + |
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Preference number: 3 (lower is better) Translates to: HAHKQGHSAVIM*LSPEGQKTVGT Trigger: TGTCCCCACTGTCTTCTGCCCCTCAGGACTGAGTCACATGATGACTGCTGAGTGGCCCTGTTTATGTGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| 3UTR-3UTR CAA 90 bp | CACATAAACAGGGCCACTCAGCAGTCATCATGTGACTCAGTCCTGAGGGGCAGAGTTCAAGGCCACAGATaGAATTCCAGGACACCCAGA | + |
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Preference number: 3 (lower is better) Translates to: HINRATQQSSCDSVLRGRVQGHR*NSRTPR Trigger: TCTGGGTGTCCTGGAATTCAATCTGTGGCCTTGAAC...TCTGCCCCTCAGGACTGAGTCACATGATGACTGCTGAGTGGCCCTGTTTATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| 3UTR TCA 72 bp | TTCAGCACTCAGGAGGCAGAGGCAAGTGGATCTCTATaGGTTCAAGGCCACAGATTGAATTCCAGGACACCC | + |
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Preference number: 3 (lower is better) Translates to: FSTQEAEASGSL*VQGHRLNSRTP Trigger: GGGTGTCCTGGAATTCAATCTGTGGCCTTGAACTCATAGAGATCCACTTGCCTCTGCCTCCTGAGTGCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| 3UTR TCA 72 bp | AGGCAAGTGGATCTCTATGAGTTCAAGGCCACAGATTaGATTCCAGGACACCCAGAGCTACACGGAGAAACC | + |
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Preference number: 3 (lower is better) Translates to: RQVDLYEFKATD*IPGHPELHGET Trigger: GGTTTCTCCGTGTAGCTCTGGGTGTCCTGGAATTCAATCTGTGGCCTTGAACTCATAGAGATCCACTTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| 3UTR TCA 72 bp | CTTTTCACTTCATGGAGGCCTTTCCAATATCTGAAATaGTGCCTGATCATCAGCAGGGGAGAAGACAAGATT | + |
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Preference number: 3 (lower is better) Translates to: LFTSWRPFQYLK*CLIISRGEDKI Trigger: AATCTTGTCTTCTCCCCTGCTGATGATCAGGCATCATTTCAGATATTGGAAAGGCCTCCATGAAGTGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CCA 90 bp | GTCCTGAGGGGCAGAAGACAGTGGGGACAGACACTCTGGCTGGGCCTGGTGGTGGGAAGGAACACCACCTaGGAGCAGGACCCAAAACCG | + |
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Preference number: 4 (lower is better) Translates to: VLRGRRQWGQTLWLGLVVGRNTT*EQDPKP Trigger: CGGTTTTGGGTCCTGCTCCCAGGTGGTGTTCCTTCC...CACCACCAGGCCCAGCCAGAGTGTCTGTCCCCACTGTCTTCTGCCCCTCAGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR TCA 90 bp | CCTGAGGGGCAGAAGACAGTGGGGACAGACACTCTGGCTGGGCCTGGTGGTGCAGGCAGCCCATACTGGTaGTCCTTAACTAGCAACGGC | + |
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Preference number: 4 (lower is better) Translates to: PEGQKTVGTDTLAGPGGAGSPYW*SLTSNG Trigger: GCCGTTGCTAGTTAAGGATCACCAGTATGGGCTGCC...TGCACCACCAGGCCCAGCCAGAGTGTCTGTCCCCACTGTCTTCTGCCCCTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CCA 90 bp | TCCAGGTGGGTAGTGGGCCAGTCAGACCACCAGCACCATGCACACACATCTACAAGGGCCGGCCTCTTCTaGGTCTGGACCTCAGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SRWVVGQSDHQHHAHTSTRAGLF*VWTSGG Trigger: GCCACCTGAGGTCCAGACCCAGAAGAGGCCGGCCCT...TGTAGATGTGTGTGCATGGTGCTGGTGGTCTGACTGGCCCACTACCCACCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CCA 90 bp | GTCCTGAGGGGCAGAAGACAGTGGGGACAGACACTCTGGCTGGGCCTGGTGGTGTTCAGGACTGTCTGCTaGTCCTCCTTCAGTTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VLRGRRQWGQTLWLGLVVFRTVC*SSFSCS Trigger: GGAGCAACTGAAGGAGGACCAGCAGACAGTCCTGAA...CACCACCAGGCCCAGCCAGAGTGTCTGTCCCCACTGTCTTCTGCCCCTCAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR GCA 90 bp | GTAGTGGGCCAGTCAGACCACCAGCACCATGCACACACATCTACACGGAGCCTGGGCTTCAGGACTGTCTaGTGGTCCTCCTTCAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: VVGQSDHQHHAHTSTRSLGFRTV*WSSFSC Trigger: GCAACTGAAGGAGGACCAGCAGACAGTCCTGAAGCC...CAGGCTCCGTGTAGATGTGTGTGCATGGTGCTGGTGGTCTGACTGGCCCACTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CCA 90 bp | CCTGAGGGGCAGAAGACAGTGGGGACAGACACTCTGGCTGGGCCTGGTGGTGCAGCTTGCTGCCAACAGTaGTGTCCGATACATTCAATG | + |
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Preference number: 4 (lower is better) Translates to: PEGQKTVGTDTLAGPGGAACCQQ*CPIHSM Trigger: CATTGAATGTATCGGACACCACTGTTGGCAGCAAGC...TGCACCACCAGGCCCAGCCAGAGTGTCTGTCCCCACTGTCTTCTGCCCCTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR GCA 90 bp | CCTGAGGGGCAGAAGACAGTGGGGACAGACACTCTGGCTGGGCCTGGTGGTGCAGTGGCGAACAAGCCATaGACTGCATTTATGTCACAA | + |
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Preference number: 4 (lower is better) Translates to: PEGQKTVGTDTLAGPGGAVANKP*TAFMSQ Trigger: TTGTGACATAAATGCAGTGCATGGCTTGTTCGCCAC...TGCACCACCAGGCCCAGCCAGAGTGTCTGTCCCCACTGTCTTCTGCCCCTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CCA 90 bp | GTAGTGGGCCAGTCAGACCACCAGCACCATGCACACACATCTACACGGAGCCTGACAACACCTGCCCTGTaGATGTTCCAACTGCCATGC | + |
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Preference number: 4 (lower is better) Translates to: VVGQSDHQHHAHTSTRSLTTPAL*MFQLPC Trigger: GCATGGCAGTTGGAACATCCACAGGGCAGGTGTTGT...CAGGCTCCGTGTAGATGTGTGTGCATGGTGCTGGTGGTCTGACTGGCCCACTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR GCA 90 bp | GTAGTGGGCCAGTCAGACCACCAGCACCATGCACACACATCTACACGGAGCCTGTCCTTCAGTTGCTCCTaGCGCTTCACTCTTTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: VVGQSDHQHHAHTSTRSLSFSCS*RFTLSS Trigger: GGAAGAAAGAGTGAAGCGGCAGGAGCAACTGAAGGA...CAGGCTCCGTGTAGATGTGTGTGCATGGTGCTGGTGGTCTGACTGGCCCACTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CCA 90 bp | CCTGAGGGGCAGAAGACAGTGGGGACAGACACTCTGGCTGGGCCTGGTGGTGCAGGCAGTTTCTTTAATTaGACTCTCTGTGCACGTGTT | + |
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Preference number: 4 (lower is better) Translates to: PEGQKTVGTDTLAGPGGAGSFFN*TLCARV Trigger: AACACGTGCACAGAGAGTCCAATTAAAGAAACTGCC...TGCACCACCAGGCCCAGCCAGAGTGTCTGTCCCCACTGTCTTCTGCCCCTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CCA 90 bp | GGACTTCTCCAGGTGGGTAGTGGGCCAGTCAGACCACCAGCACCATGCACACACTCAATGCAGAGATGGTaGGTAAGCTGTTTATCTCTG | + |
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Preference number: 4 (lower is better) Translates to: GLLQVGSGPVRPPAPCTHSMQRW*VSCLSL Trigger: CAGAGATAAACAGCTTACCCACCATCTCTGCATTGA...GTGTGTGCATGGTGCTGGTGGTCTGACTGGCCCACTACCCACCTGGAGAAGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CCA 90 bp | CACATAAACAGGGCCACTCAGCAGTCATCATGTGACTCAGTCCTGAGGGGCAGACTCTCCTCGTCCACCTaGAAGTCGGGATTCTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: HINRATQQSSCDSVLRGRLSSST*KSGFSN Trigger: GTTTGAGAATCCCGACTTCCAGGTGGACGAGGAGAG...TCTGCCCCTCAGGACTGAGTCACATGATGACTGCTGAGTGGCCCTGTTTATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR GCA 90 bp | ATGAGTTCAAGGCCACAGATTGAATTCCAGGACACCCAGAGCTACACGGAGAAATCCTTGAGCTCCTGCTaGTCCAAGAGCCTCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: MSSRPQIEFQDTQSYTEKSLSSC*SKSLSC Trigger: GCAGCTGAGGCTCTTGGAGCAGCAGGAGCTCAAGGA...TTTCTCCGTGTAGCTCTGGGTGTCCTGGAATTCAATCTGTGGCCTTGAACTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CCA 90 bp | CAAGGCCACAGATTGAATTCCAGGACACCCAGAGCTACACGGAGAAACCCTGACCCTCTATTGTTCCTGTaGCGAACAAGCCATGCACTG | + |
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Preference number: 4 (lower is better) Translates to: QGHRLNSRTPRATRRNPDPLLFL*RTSHAL Trigger: CAGTGCATGGCTTGTTCGCCACAGGAACAATAGAGG...GTCAGGGTTTCTCCGTGTAGCTCTGGGTGTCCTGGAATTCAATCTGTGGCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CCA 90 bp | GTAGTGGGCCAGTCAGACCACCAGCACCATGCACACACATCTACACGGAGCCTGAACTTTCTGCATCACTaGGTTTTCCTTCCGGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: VVGQSDHQHHAHTSTRSLNFLHH*VFLPVL Trigger: AAGAACCGGAAGGAAAACCCAGTGATGCAGAAAGTT...CAGGCTCCGTGTAGATGTGTGTGCATGGTGCTGGTGGTCTGACTGGCCCACTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR TCA 90 bp | ATAAACAGGGCCACTCAGCAGTCATCATGTGACTCAGTCCTGAGGGGCAGAAGAGAGACTTGCCGCAGCTaGGGCTGTAAATCTTCACTT | + |
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Preference number: 4 (lower is better) Translates to: INRATQQSSCDSVLRGRRETCRS*GCKSSL Trigger: AAGTGAAGATTTACAGCCTCAGCTGCGGCAAGTCTC...TCTTCTGCCCCTCAGGACTGAGTCACATGATGACTGCTGAGTGGCCCTGTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CCA 90 bp | AGAGAGAAAGGGGCAGCCACTTGGAAAAAGCACCCAGGGCCAGGGACTTCTCCAGTACAAGTCACAGGATaGATAGTGGTAAGAGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: REKGAATWKKHPGPGTSPVQVTG*IVVREV Trigger: GACTTCTCTTACCACTATCCATCCTGTGACTTGTAC...TGGAGAAGTCCCTGGCCCTGGGTGCTTTTTCCAAGTGGCTGCCCCTTTCTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR TCA 90 bp | AGAGAGAAAGGGGCAGCCACTTGGAAAAAGCACCCAGGGCCAGGGACTTCTCCAGGCATTTCGAAGTCCTaGATAAGTTCAATTCTCCTA | + |
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Preference number: 4 (lower is better) Translates to: REKGAATWKKHPGPGTSPGISKS*ISSILL Trigger: TAGGAGAATTGAACTTATTCAGGACTTCGAAATGCC...TGGAGAAGTCCCTGGCCCTGGGTGCTTTTTCCAAGTGGCTGCCCCTTTCTCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR TCA 90 bp | ATAAACAGGGCCACTCAGCAGTCATCATGTGACTCAGTCCTGAGGGGCAGAAGAAGGGAATCCTGGAAATaGACTGACTTAATCGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: INRATQQSSCDSVLRGRRRESWK*TDLIGS Trigger: GCTGCCGATTAAGTCAGTTCATTTCCAGGATTCCCT...TCTTCTGCCCCTCAGGACTGAGTCACATGATGACTGCTGAGTGGCCCTGTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR TCA 90 bp | ATGAGTTCAAGGCCACAGATTGAATTCCAGGACACCCAGAGCTACACGGAGAAAGTCTGCGCTGCTTCCTaGCTTCTTCAACCCAACCTT | + |
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Preference number: 4 (lower is better) Translates to: MSSRPQIEFQDTQSYTEKVCAAS*LLQPNL Trigger: AAGGTTGGGTTGAAGAAGTCAGGAAGCAGCGCAGAC...TTTCTCCGTGTAGCTCTGGGTGTCCTGGAATTCAATCTGTGGCCTTGAACTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR GCA 90 bp | ATAAACAGGGCCACTCAGCAGTCATCATGTGACTCAGTCCTGAGGGGCAGAAGATGTGGATGTTCCAACTaGCATGCTCAAGGCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: INRATQQSSCDSVLRGRRCGCSN*HAQGSI Trigger: AATGGAGCCTTGAGCATGGCAGTTGGAACATCCACA...TCTTCTGCCCCTCAGGACTGAGTCACATGATGACTGCTGAGTGGCCCTGTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR GCA 90 bp | CACATAAACAGGGCCACTCAGCAGTCATCATGTGACTCAGTCCTGAGGGGCAGAAGAGTAAATGTCAACTaGTTGCTGCCAACAGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: HINRATQQSSCDSVLRGRRVNVN*LLPTVV Trigger: CACCACTGTTGGCAGCAAGCAGTTGACATTTACTCT...TCTGCCCCTCAGGACTGAGTCACATGATGACTGCTGAGTGGCCCTGTTTATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR TCA 90 bp | AGAGAGAAAGGGGCAGCCACTTGGAAAAAGCACCCAGGGCCAGGGACTTCTCCAATAAAATCTCAAAGGTaGCAACTTCAGAATCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: REKGAATWKKHPGPGTSPIKSQR*QLQNPS Trigger: GCTTGGATTCTGAAGTTGTCACCTTTGAGATTTTAT...TGGAGAAGTCCCTGGCCCTGGGTGCTTTTTCCAAGTGGCTGCCCCTTTCTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR TCA 90 bp | GAGAATCCATGGGGAGAAGCACAGCGTCTAGTTGCTCGTGGGCACATTTCTTTGATCCTGGAAATGAACTaGCTTAATCGGCAGCCCATA | + |
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Preference number: 4 (lower is better) Translates to: ENPWGEAQRLVARGHISLILEMN*LNRQPI Trigger: TATGGGCTGCCGATTAAGTCAGTTCATTTCCAGGAT...CAAAGAAATGTGCCCACGAGCAACTAGACGCTGTGCTTCTCCCCATGGATTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR TCA 90 bp | CACATAAACAGGGCCACTCAGCAGTCATCATGTGACTCAGTCCTGAGGGGCAGAAGATTTTTCCTTTCCTaGCGATGCAGTTTTTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: HINRATQQSSCDSVLRGRRFFLS*RCSFSA Trigger: GGCTGAAAAACTGCATCGTCAGGAAAGGAAAAATCT...TCTGCCCCTCAGGACTGAGTCACATGATGACTGCTGAGTGGCCCTGTTTATGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR GCA 90 bp | ATAAACAGGGCCACTCAGCAGTCATCATGTGACTCAGTCCTGAGGGGCAGAAGATCCTGTTGCTTCTTTTaGTGTTCAGACCTCTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: INRATQQSSCDSVLRGRRSCCFF*CSDLLR Trigger: TCTCAAGAGGTCTGAACAGCAAAAGAAGCAACAGGA...TCTTCTGCCCCTCAGGACTGAGTCACATGATGACTGCTGAGTGGCCCTGTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CCA 90 bp | TCTATGAGTTCAAGGCCACAGATTGAATTCCAGGACACCCAGAGCTACACGGAGAGTCTCGGCCGAACTTaGGAATTCTGGTTTTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: SMSSRPQIEFQDTQSYTESLGRT*EFWFCS Trigger: ACTACAAAACCAGAATTCCCAAGTTCGGCCGAGACT...CTCCGTGTAGCTCTGGGTGTCCTGGAATTCAATCTGTGGCCTTGAACTCATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR TCA 90 bp | CACATAAACAGGGCCACTCAGCAGTCATCATGTGACTCAGTCCTGAGGGGCAGAATACTGTCCATCTTTTaGCACCTTGATAGTAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: HINRATQQSSCDSVLRGRILSIF*HLDSST Trigger: TGTACTACTATCAAGGTGTCAAAAGATGGACAGTAT...TCTGCCCCTCAGGACTGAGTCACATGATGACTGCTGAGTGGCCCTGTTTATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR TCA 90 bp | CACATAAACAGGGCCACTCAGCAGTCATCATGTGACTCAGTCCTGAGGGGCAGACATAAGCAAATGGATTaGCCATCAATTTCACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HINRATQQSSCDSVLRGRHKQMD*PSISPC Trigger: ACAAGGTGAAATTGATGGTCAATCCATTTGCTTATG...TCTGCCCCTCAGGACTGAGTCACATGATGACTGCTGAGTGGCCCTGTTTATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR GCA 90 bp | ATGAGTTCAAGGCCACAGATTGAATTCCAGGACACCCAGAGCTACACGGAGAAACCGGAATGTAGTAAATaGCCATCTTGGGGGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: MSSRPQIEFQDTQSYTEKPECSK*PSWGIH Trigger: ATGAATCCCCCAAGATGGGCATTTACTACATTCCGG...TTTCTCCGTGTAGCTCTGGGTGTCCTGGAATTCAATCTGTGGCCTTGAACTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR GCA 90 bp | ATAAACAGGGCCACTCAGCAGTCATCATGTGACTCAGTCCTGAGGGGCAGAAGATCCATGAAAAACCCATaGATATATGCTCGGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: INRATQQSSCDSVLRGRRSMKNP*IYARRK Trigger: TTTCCTCCGAGCATATATGCATGGGTTTTTCATGGA...TCTTCTGCCCCTCAGGACTGAGTCACATGATGACTGCTGAGTGGCCCTGTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR GCA 90 bp | TGGTGCATCCCTTTAACTTCAGCACTCAGGAGGCAGAGGCAAGTGGATCTCTATTTTTCAGCCTCCTGTTaGTTCTTTTGCTGTTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: WCIPLTSALRRQRQVDLYFSASC*FFCCSD Trigger: GTCTGAACAGCAAAAGAAGCAACAGGAGGCTGAAAA...ATAGAGATCCACTTGCCTCTGCCTCCTGAGTGCTGAAGTTAAAGGGATGCACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR GCA 90 bp | ATAAACAGGGCCACTCAGCAGTCATCATGTGACTCAGTCCTGAGGGGCAGAAGAAATCATCATACACTGTaGTCTCTGGATTCTCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: INRATQQSSCDSVLRGRRNHHTL*SLDSLL Trigger: TAGAAGAGAATCCAGAGAGCACAGTGTATGATGATT...TCTTCTGCCCCTCAGGACTGAGTCACATGATGACTGCTGAGTGGCCCTGTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR GCA 90 bp | TTTCCAGTAGAGGGTGAACTTTTCACTTCATGGAGGCCTTTCCAATATCTGAAATGGTCCTCCTTCAGTTaGTCCTGCCGCTTCACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FPVEGELFTSWRPFQYLKWSSFS*SCRFTL Trigger: AAGAGTGAAGCGGCAGGAGCAACTGAAGGAGGACCA...TTTCAGATATTGGAAAGGCCTCCATGAAGTGAAAAGTTCACCCTCTACTGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
||
| CDS-3UTR GCA 90 bp | ATGAGTTCAAGGCCACAGATTGAATTCCAGGACACCCAGAGCTACACGGAGAAAATAAACTTCAGAGCTTaGACCTACAAAGTACAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: MSSRPQIEFQDTQSYTEKINFRA*TYKVQV Trigger: GACTTGTACTTTGTAGGTGCAAGCTCTGAAGTTTAT...TTTCTCCGTGTAGCTCTGGGTGTCCTGGAATTCAATCTGTGGCCTTGAACTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR TCA 90 bp | TTTCCAGTAGAGGGTGAACTTTTCACTTCATGGAGGCCTTTCCAATATCTGAAATCTCTGAATCTGCTGTaGCACTATTTAATGCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: FPVEGELFTSWRPFQYLKSLNLL*HYLMHS Trigger: ACTGTGCATTAAATAGTGTCACAGCAGATTCAGAGA...TTTCAGATATTGGAAAGGCCTCCATGAAGTGAAAAGTTCACCCTCTACTGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CCA 90 bp | TTTCCAGTAGAGGGTGAACTTTTCACTTCATGGAGGCCTTTCCAATATCTGAAACGAACTTGGGAATTCTaGTTTTGTAGTAAAAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPVEGELFTSWRPFQYLKRTWEF*FCSKSL Trigger: CAGGCTTTTACTACAAAACCAGAATTCCCAAGTTCG...TTTCAGATATTGGAAAGGCCTCCATGAAGTGAAAAGTTCACCCTCTACTGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CAA 90 bp | CCTGAGGGGCAGAAGACAGTGGGGACAGACACTCTGGCTGGGCCTGGTGGTGCATTGGTGGCAGACTCTTaGAAGCTCCTGAACTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: PEGQKTVGTDTLAGPGGALVADS*KLLNSS Trigger: CGAAGAGTTCAGGAGCTTCAAAGAGTCTGCCACCAA...TGCACCACCAGGCCCAGCCAGAGTGTCTGTCCCCACTGTCTTCTGCCCCTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS GCA 90 bp | TCCTCCTCTTCATCCTTGAGCTCCTGCTGCTCCAAGAGCCTCAGCTaGTTCTTCCTCTTCTCACTGATCCTCGAGACGAGGGGGTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSLSSCCSKSLS*FFLFSLILETRGLR Trigger: TCTCAACCCCCTCGTCTCGAGGATCAGTGAGAAGAGGAAGAAGCAGCTGAGGCTCTTGGAGCAGCAGGAGCTCAAGGATGAAGAGGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CAA 90 bp | GGACTTCTCCAGGTGGGTAGTGGGCCAGTCAGACCACCAGCACCATGCACACACCCCTTTTTCTTACTCTaGGATCCCAGCATTCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: GLLQVGSGPVRPPAPCTHPFFLL*DPSIPL Trigger: GAGTGGAATGCTGGGATCCAAGAGTAAGAAAAAGGG...GTGTGTGCATGGTGCTGGTGGTCTGACTGGCCCACTACCCACCTGGAGAAGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CAA 90 bp | CACATAAACAGGGCCACTCAGCAGTCATCATGTGACTCAGTCCTGAGGGGCAGACCACTCGACCCTCTATaGTTCCTGTGGCGAACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: HINRATQQSSCDSVLRGRPLDPL*FLWRTS Trigger: GCTTGTTCGCCACAGGAACAATAGAGGGTCGAGTGG...TCTGCCCCTCAGGACTGAGTCACATGATGACTGCTGAGTGGCCCTGTTTATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS GCA 90 bp | TCTCTGCTTGGTGGCAGACTCTTTGAAGCTCCTGAACTCTTCGCCTaGTTTGATCTCGTAGAACTGGGGCTTCAGGACTGTCTGCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SLLGGRLFEAPELFA*FDLVELGLQDCLLV Trigger: GACCAGCAGACAGTCCTGAAGCCCCAGTTCTACGAGATCAAAGCAGGCGAAGAGTTCAGGAGCTTCAAAGAGTCTGCCACCAAGCAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS GCA 90 bp | CAGCATTCCACTCGACCCTCTATTGTTCCTGTGGCGAACAAGCCATaGACTGCATTTATGTCACAAACATTGTTCTCCGCGGCGTCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: QHSTRPSIVPVANKP*TAFMSQTLFSAASV Trigger: GACGGACGCCGCGGAGAACAATGTTTGTGACATAAATGCAGTGCATGGCTTGTTCGCCACAGGAACAATAGAGGGTCGAGTGGAATGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CAA 90 bp | CAAGGCCACAGATTGAATTCCAGGACACCCAGAGCTACACGGAGAAACCCTGACTTTATGTCACAAACATaGTTCTCCGCGGCGTCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: QGHRLNSRTPRATRRNPDFMSQT*FSAASV Trigger: GACGGACGCCGCGGAGAACAATGTTTGTGACATAAA...GTCAGGGTTTCTCCGTGTAGCTCTGGGTGTCCTGGAATTCAATCTGTGGCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CAA 90 bp | TCCAGGTGGGTAGTGGGCCAGTCAGACCACCAGCACCATGCACACACATCTACACGATCTTCCAGAGTTTaGTTCATTAGTCTCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRWVVGQSDHQHHAHTSTRSSRV*FISLCL Trigger: CAAGCAGAGACTAATGAACAAAACTCTGGAAGATCG...TGTAGATGTGTGTGCATGGTGCTGGTGGTCTGACTGGCCCACTACCCACCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
||
| CDS-3UTR CAA 90 bp | ATAAACAGGGCCACTCAGCAGTCATCATGTGACTCAGTCCTGAGGGGCAGAAGAAACTCTTCTGTCAAGTaGTCCAGGAAGGAACACCAC | + |
|
Preference number: 5 (lower is better) Translates to: INRATQQSSCDSVLRGRRNSSVK*SRKEHH Trigger: GTGGTGTTCCTTCCTGGACAACTTGACAGAAGAGTT...TCTTCTGCCCCTCAGGACTGAGTCACATGATGACTGCTGAGTGGCCCTGTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CAA 90 bp | GAGAATCCATGGGGAGAAGCACAGCGTCTAGTTGCTCGTGGGCACATTTCTTTGCTCCTGTTGCTTCTTTaGCTGTTCAGACCTCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ENPWGEAQRLVARGHISLLLLLL*LFRPLE Trigger: CTCAAGAGGTCTGAACAGCAAAAGAAGCAACAGGAG...CAAAGAAATGTGCCCACGAGCAACTAGACGCTGTGCTTCTCCCCATGGATTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS CCA 90 bp | TCTCTTCTAACTCTTCTGTCAAGTTGTCCAGGAAGGAACACCACCTaGGAGCAGGACCCAAAACCGGAATGTAGTAAATGCCCATCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLLTLLSSCPGRNTT*EQDPKPECSKCPSW Trigger: CCAAGATGGGCATTTACTACATTCCGGTTTTGGGTCCTGCTCCCAGGTGGTGTTCCTTCCTGGACAACTTGACAGAAGAGTTAGAAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CAA 90 bp | GAGAATCCATGGGGAGAAGCACAGCGTCTAGTTGCTCGTGGGCACATTTCTTTGATCTTGGGGGATTCATaGGCAGTAAGAAGCATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ENPWGEAQRLVARGHISLILGDS*AVRSIP Trigger: AGGAATGCTTCTTACTGCCAATGAATCCCCCAAGAT...CAAAGAAATGTGCCCACGAGCAACTAGACGCTGTGCTTCTCCCCATGGATTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CAA 90 bp | CAAGGCCACAGATTGAATTCCAGGACACCCAGAGCTACACGGAGAAACCCTGACCCATCTTTTGACACCTaGATAGTAGTACACACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: QGHRLNSRTPRATRRNPDPSFDT*IVVHTV Trigger: TACTGTGTGTACTACTATCAAGGTGTCAAAAGATGG...GTCAGGGTTTCTCCGTGTAGCTCTGGGTGTCCTGGAATTCAATCTGTGGCCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CAA 90 bp | TTTCCAGTAGAGGGTGAACTTTTCACTTCATGGAGGCCTTTCCAATATCTGAAATCCTCCTCTTCATCCTaGAGCTCCTGCTGCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FPVEGELFTSWRPFQYLKSSSSS*SSCCSK Trigger: CTTGGAGCAGCAGGAGCTCAAGGATGAAGAGGAGGA...TTTCAGATATTGGAAAGGCCTCCATGAAGTGAAAAGTTCACCCTCTACTGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS CCA 90 bp | TTACTCTTGGATCCCAGCATTCCACTCGACCCTCTATTGTTCCTGTaGCGAACAAGCCATGCACTGCATTTATGTCACAAACATTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLDPSIPLDPLLFL*RTSHALHLCHKHCS Trigger: AGAACAATGTTTGTGACATAAATGCAGTGCATGGCTTGTTCGCCACAGGAACAATAGAGGGTCGAGTGGAATGCTGGGATCCAAGAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CAA 90 bp | ATGAGTTCAAGGCCACAGATTGAATTCCAGGACACCCAGAGCTACACGGAGAAATTTCAGCGTAGACTTTaGTTTCTCCTCTTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: MSSRPQIEFQDTQSYTEKFQRRL*FLLFLF Trigger: GAAGAGGAAGAGGAGAAACAAAAGTCTACGCTGAAA...TTTCTCCGTGTAGCTCTGGGTGTCCTGGAATTCAATCTGTGGCCTTGAACTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS GCA 90 bp | TGTTGCTTCTTTTGCTGTTCAGACCTCTTGAGAGTAAATGTCAACTaGTTGCTGCCAACAGTGGTGTCCGATACATTCAATGTCCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: CCFFCCSDLLRVNVN*LLPTVVSDTFNVPC Trigger: ACATGGGACATTGAATGTATCGGACACCACTGTTGGCAGCAAGCAGTTGACATTTACTCTCAAGAGGTCTGAACAGCAAAAGAAGCAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS CCA 90 bp | TCTATAAACTTCAGAGCTTGCACCTACAAAGTACAAGTCACAGGATaGATAGTGGTAAGAGAAGTCTCGGCCGAACTTGGGAATTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SINFRACTYKVQVTG*IVVREVSAELGNSG Trigger: ACCAGAATTCCCAAGTTCGGCCGAGACTTCTCTTACCACTATCCATCCTGTGACTTGTACTTTGTAGGTGCAAGCTCTGAAGTTTATAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CAA 90 bp | TGGTGCATCCCTTTAACTTCAGCACTCAGGAGGCAGAGGCAAGTGGATCTCTATTCAATGTCCCATGTTTaGCTTCAAGTTTCAAACGAT | + |
|
Preference number: 5 (lower is better) Translates to: WCIPLTSALRRQRQVDLYSMSHV*LQVSND Trigger: ATCGTTTGAAACTTGAAGCAAAACATGGGACATTGA...ATAGAGATCCACTTGCCTCTGCCTCCTGAGTGCTGAAGTTAAAGGGATGCACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CAA 90 bp | TTTCCAGTAGAGGGTGAACTTTTCACTTCATGGAGGCCTTTCCAATATCTGAAAGTAAATGTCAACTGCTaGCTGCCAACAGTGGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FPVEGELFTSWRPFQYLKVNVNC*LPTVVS Trigger: GGACACCACTGTTGGCAGCAAGCAGTTGACATTTAC...TTTCAGATATTGGAAAGGCCTCCATGAAGTGAAAAGTTCACCCTCTACTGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CAA 90 bp | ATGAGTTCAAGGCCACAGATTGAATTCCAGGACACCCAGAGCTACACGGAGAAATATAAACTTCAGAGCTaGCACCTACAAAGTACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: MSSRPQIEFQDTQSYTEKYKLQS*HLQSTS Trigger: ACTTGTACTTTGTAGGTGCAAGCTCTGAAGTTTATA...TTTCTCCGTGTAGCTCTGGGTGTCCTGGAATTCAATCTGTGGCCTTGAACTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CAA 90 bp | ATGAGTTCAAGGCCACAGATTGAATTCCAGGACACCCAGAGCTACACGGAGAAATTAAGTGCCAGTTCTTaGTTAACTTTTGGCAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: MSSRPQIEFQDTQSYTEKLSASS*LTFGSF Trigger: GAAACTGCCAAAAGTTAACAAAGAACTGGCACTTAA...TTTCTCCGTGTAGCTCTGGGTGTCCTGGAATTCAATCTGTGGCCTTGAACTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS CCA 90 bp | ACAAGTCACAGGATGGATAGTGGTAAGAGAAGTCTCGGCCGAACTTaGGAATTCTGGTTTTGTAGTAAAAGCCTGATTGTGAGTGAAATT | + |
|
Preference number: 5 (lower is better) Translates to: TSHRMDSGKRSLGRT*EFWFCSKSLIVSEI Trigger: AATTTCACTCACAATCAGGCTTTTACTACAAAACCAGAATTCCCAAGTTCGGCCGAGACTTCTCTTACCACTATCCATCCTGTGACTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS TCA 90 bp | TCAATGCAGAGATGGTGGGTAAGCTGTTTATCTCTGAATCTGCTGTaGCACTATTTAATGCACAGTCTAACACGCCAACCCTTTTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SMQRWWVSCLSLNLL*HYLMHSLTRQPFFL Trigger: TAAGAAAAAGGGTTGGCGTGTTAGACTGTGCATTAAATAGTGTCACAGCAGATTCAGAGATAAACAGCTTACCCACCATCTCTGCATTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS TCA 90 bp | TTTGACACCTTGATAGTAGTACACACAGTAGGCATTTCGAAGTCCTaGATAAGTTCAATTCTCCTACGAACATCGACATTCTTCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FDTLIVVHTVGISKS*ISSILLRTSTFFFC Trigger: GCAGAAGAAGAATGTCGATGTTCGTAGGAGAATTGAACTTATTCAGGACTTCGAAATGCCTACTGTGTGTACTACTATCAAGGTGTCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS CCA 90 bp | AGGATGGATAGTGGTAAGAGAAGTCTCGGCCGAACTTGGGAATTCTaGTTTTGTAGTAAAAGCCTGATTGTGAGTGAAATTCAATATATC | + |
|
Preference number: 5 (lower is better) Translates to: RMDSGKRSLGRTWEF*FCSKSLIVSEIQYI Trigger: GATATATTGAATTTCACTCACAATCAGGCTTTTACTACAAAACCAGAATTCCCAAGTTCGGCCGAGACTTCTCTTACCACTATCCATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS-3UTR CAA 90 bp | TTTCCAGTAGAGGGTGAACTTTTCACTTCATGGAGGCCTTTCCAATATCTGAAAATTTTCCCGGAGTCCTaGTTCCACATTTTGACAATT | + |
|
Preference number: 5 (lower is better) Translates to: FPVEGELFTSWRPFQYLKIFPES*FHILTI Trigger: AATTGTCAAAATGTGGAACAAGGACTCCGGGAAAAT...TTTCAGATATTGGAAAGGCCTCCATGAAGTGAAAAGTTCACCCTCTACTGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS CAA 90 bp | GTTCCTGTGGCGAACAAGCCATGCACTGCATTTATGTCACAAACATaGTTCTCCGCGGCGTCCGTCTGGAGAGGATTCAGGTACCGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: VPVANKPCTAFMSQT*FSAASVWRGFRYRP Trigger: AGGGCGGTACCTGAATCCTCTCCAGACGGACGCCGCGGAGAACAATGTTTGTGACATAAATGCAGTGCATGGCTTGTTCGCCACAGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS CAA 72 bp | TTCTTCCTCTTCTCACTGATCCTCGAGACGAGGGGGTaGAGAAGCCTGAACTCTTCACTCTCCTCGTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: FFLFSLILETRG*RSLNSSLSSST Trigger: GGTGGACGAGGAGAGTGAAGAGTTCAGGCTTCTCAACCCCCTCGTCTCGAGGATCAGTGAGAAGAGGAAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS GCA 72 bp | GGTGGCAGACTCTTTGAAGCTCCTGAACTCTTCGCCTaGTTTGATCTCGTAGAACTGGGGCTTCAGGACTGT | + |
|
Preference number: 6 (lower is better) Translates to: GGRLFEAPELFA*FDLVELGLQDC Trigger: ACAGTCCTGAAGCCCCAGTTCTACGAGATCAAAGCAGGCGAAGAGTTCAGGAGCTTCAAAGAGTCTGCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
||
| CDS CAA 72 bp | GCGAACAAGCCATGCACTGCATTTATGTCACAAACATaGTTCTCCGCGGCGTCCGTCTGGAGAGGATTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ANKPCTAFMSQT*FSAASVWRGFR Trigger: CCTGAATCCTCTCCAGACGGACGCCGCGGAGAACAATGTTTGTGACATAAATGCAGTGCATGGCTTGTTCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS GCA 72 bp | AACGGCTTATCCGAGCGAAGATCATATAACAACACCTaGCCTGTGGATGTTCCAACTGCCATGCTCAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: NGLSERRSYNNT*PVDVPTAMLKA Trigger: AGCCTTGAGCATGGCAGTTGGAACATCCACAGGGCAGGTGTTGTTATATGATCTTCGCTCGGATAAGCCGTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
||
| CDS CCA 72 bp | ACTCTTCTGTCAAGTTGTCCAGGAAGGAACACCACCTaGGAGCAGGACCCAAAACCGGAATGTAGTAAATGC | + |
|
Preference number: 6 (lower is better) Translates to: TLLSSCPGRNTT*EQDPKPECSKC Trigger: GCATTTACTACATTCCGGTTTTGGGTCCTGCTCCCAGGTGGTGTTCCTTCCTGGACAACTTGACAGAAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
||
| CDS CCA 72 bp | TTCAGAGCTTGCACCTACAAAGTACAAGTCACAGGATaGATAGTGGTAAGAGAAGTCTCGGCCGAACTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: FRACTYKVQVTG*IVVREVSAELG Trigger: CCCAAGTTCGGCCGAGACTTCTCTTACCACTATCCATCCTGTGACTTGTACTTTGTAGGTGCAAGCTCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
||
| CDS CCA 72 bp | TTTATGTCACAAACATTGTTCTCCGCGGCGTCCGTCTaGAGAGGATTCAGGTACCGCCCTTGTTCTAAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: FMSQTLFSAASV*RGFRYRPCSKF Trigger: AAACTTAGAACAAGGGCGGTACCTGAATCCTCTCCAGACGGACGCCGCGGAGAACAATGTTTGTGACATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
||
| CDS CAA 72 bp | TTACTCTTGGATCCCAGCATTCCACTCGACCCTCTATaGTTCCTGTGGCGAACAAGCCATGCACTGCATTTA | + |
|
Preference number: 6 (lower is better) Translates to: LLLDPSIPLDPL*FLWRTSHALHL Trigger: TAAATGCAGTGCATGGCTTGTTCGCCACAGGAACAATAGAGGGTCGAGTGGAATGCTGGGATCCAAGAGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS CAA 90 bp | CCCTTTTTCTTACTCTTGGATCCCAGCATTCCACTCGACCCTCTATaGTTCCTGTGGCGAACAAGCCATGCACTGCATTTATGTCACAAA | + |
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Preference number: 6 (lower is better) Translates to: PFFLLLDPSIPLDPL*FLWRTSHALHLCHK Trigger: TTTGTGACATAAATGCAGTGCATGGCTTGTTCGCCACAGGAACAATAGAGGGTCGAGTGGAATGCTGGGATCCAAGAGTAAGAAAAAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS GCA 72 bp | AATTCTCCTACGAACATCGACATTCTTCTTCTGCAGTaGTCTCTTCTTCCTGTCAGAAAGCCACTCGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: NSPTNIDILLLQ*SLLPVRKPLGK Trigger: CTTCCCGAGTGGCTTTCTGACAGGAAGAAGAGAGCACTGCAGAAGAAGAATGTCGATGTTCGTAGGAGAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS CAA 72 bp | ATGCACAGTCTAACACGCCAACCCTTTTTCTTACTCTaGGATCCCAGCATTCCACTCGACCCTCTATTGTTC | + |
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Preference number: 6 (lower is better) Translates to: MHSLTRQPFFLL*DPSIPLDPLLF Trigger: GAACAATAGAGGGTCGAGTGGAATGCTGGGATCCAAGAGTAAGAAAAAGGGTTGGCGTGTTAGACTGTGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS CAA 72 bp | GTTTTGTTCATTAGTCTCTGCTTGGTGGCAGACTCTTaGAAGCTCCTGAACTCTTCGCCTGCTTTGATCTCG | + |
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Preference number: 6 (lower is better) Translates to: VLFISLCLVADS*KLLNSSPALIS Trigger: CGAGATCAAAGCAGGCGAAGAGTTCAGGAGCTTCAAAGAGTCTGCCACCAAGCAGAGACTAATGAACAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS TCA 72 bp | AGATGGTGGGTAAGCTGTTTATCTCTGAATCTGCTGTaGCACTATTTAATGCACAGTCTAACACGCCAACCC | + |
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Preference number: 6 (lower is better) Translates to: RWWVSCLSLNLL*HYLMHSLTRQP Trigger: GGGTTGGCGTGTTAGACTGTGCATTAAATAGTGTCACAGCAGATTCAGAGATAAACAGCTTACCCACCATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS CCA 72 bp | AGGATGGATAGTGGTAAGAGAAGTCTCGGCCGAACTTaGGAATTCTGGTTTTGTAGTAAAAGCCTGATTGTG | + |
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Preference number: 6 (lower is better) Translates to: RMDSGKRSLGRT*EFWFCSKSLIV Trigger: CACAATCAGGCTTTTACTACAAAACCAGAATTCCCAAGTTCGGCCGAGACTTCTCTTACCACTATCCATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS CCA 72 bp | GCTGGGATAGAGGCAAACATCATTAAGATCATGTTCTaGCTCCAACGAAGTAAATATTTTCCCGGAGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: AGIEANIIKIMF*LQRSKYFPGVL Trigger: AAGGACTCCGGGAAAATATTTACTTCGTTGGAGCCAGAACATGATCTTAATGATGTTTGCCTCTATCCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS CAA 90 bp | GGCTCCAACGAAGTAAATATTTTCCCGGAGTCCTTGTTCCACATTTaGACAATTCTAGAGTCTGCAGACAAAACCAAATCTAGGGAATCC | + |
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Preference number: 6 (lower is better) Translates to: GSNEVNIFPESLFHI*TILESADKTKSRES Trigger: GGATTCCCTAGATTTGGTTTTGTCTGCAGACTCTAGAATTGTCAAAATGTGGAACAAGGACTCCGGGAAAATATTTACTTCGTTGGAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS CAA 90 bp | GCTTGCTGCCAACAGTGGTGTCCGATACATTCAATGTCCCATGTTTaGCTTCAAGTTTCAAACGATCTTCCAGAGTTTTGTTCATTAGTC | + |
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Preference number: 6 (lower is better) Translates to: ACCQQWCPIHSMSHV*LQVSNDLPEFCSLV Trigger: GACTAATGAACAAAACTCTGGAAGATCGTTTGAAACTTGAAGCAAAACATGGGACATTGAATGTATCGGACACCACTGTTGGCAGCAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS CCA 72 bp | AGTGGTAAGAGAAGTCTCGGCCGAACTTGGGAATTCTaGTTTTGTAGTAAAAGCCTGATTGTGAGTGAAATT | + |
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Preference number: 6 (lower is better) Translates to: SGKRSLGRTWEF*FCSKSLIVSEI Trigger: AATTTCACTCACAATCAGGCTTTTACTACAAAACCAGAATTCCCAAGTTCGGCCGAGACTTCTCTTACCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS CAA 72 bp | CAACAGTGGTGTCCGATACATTCAATGTCCCATGTTTaGCTTCAAGTTTCAAACGATCTTCCAGAGTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: QQWCPIHSMSHV*LQVSNDLPEFC Trigger: ACAAAACTCTGGAAGATCGTTTGAAACTTGAAGCAAAACATGGGACATTGAATGTATCGGACACCACTGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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| CDS TCA 72 bp | TTGATAGTAGTACACACAGTAGGCATTTCGAAGTCCTaGATAAGTTCAATTCTCCTACGAACATCGACATTC | + |
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Preference number: 6 (lower is better) Translates to: LIVVHTVGISKS*ISSILLRTSTF Trigger: GAATGTCGATGTTCGTAGGAGAATTGAACTTATTCAGGACTTCGAAATGCCTACTGTGTGTACTACTATCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046011.12 |
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