Pregenerated sensors for NOCT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023087Ensembl transcript IDs: ENSMUST00000023849.15, ENSMUST00000144826.2, ENSMUST00000167780.2, ENSMUST00000193018.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTTTCAAGGGCATGCTGGAAATGATGGAGAGTAGTGGCAGAAACTaGGTGTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCC | + |
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Preference number: 1 (lower is better) Translates to: FFKGMLEMMESSGRN*VSFSRQLPILVQFP Trigger: GGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGACACCCAGTTTCTGCCACTACTCTCCATCATTTCCAGCATGCCCTTGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCAAGCTGGCCTCCAAGACGTGAGCTTTCTTGTCTCAGCTGAATGTTGGGCTAAGCTCAAACTGGAGTaGAAACACCTTTTCAATGCG | + |
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Preference number: 2 (lower is better) Translates to: AQAGLQDVSFLVSAECWAKLKLE*KHLFNA Trigger: CGCATTGAAAAGGTGTTTGCACTCCAGTTTGAGCTT...AGCCCAACATTCAGCTGAGACAAGAAAGCTCACGTCTTGGAGGCCAGCTTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGCACATCCCAGGAGAAGTGATTGGAGTAATCTTCACACGTCTACCAACGTCAGGATGGTACACAGATaGACAACAAGCTCAAACTGG | + |
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Preference number: 2 (lower is better) Translates to: KAHPRRSDWSNLHTSTNVRMVHR*TTSSNW Trigger: CCAGTTTGAGCTTGTTGTTCATCTGTGTACCATCCT...GACGTTGGTAGACGTGTGAAGATTACTCCAATCACTTCTCCTGGGATGTGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAGTGCAAACACCTTTTCAATGCGGGTTTTAGCTGGAAAGGTTTGTGAACAAAGTAGTGGCAGAAACTaGGTGTCCTTTTCCAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: WSANTFSMRVLAGKVCEQSSGRN*VSFSRQ Trigger: TTGCCTGGAAAAGGACACCCAGTTTCTGCCACTACT...TTGTTCACAAACCTTTCCAGCTAAAACCCGCATTGAAAAGGTGTTTGCACTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| 3UTR-3UTR CCA 90 bp | AGAACTGAATGCTACGGAATTTCTTTAAAACACAACAGAGAAGTCAAAGGCATAAGTAGTGGCAGAAACTaGGTGTCCTTTTCCAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: RTECYGISLKHNREVKGISSGRN*VSFSRQ Trigger: TTGCCTGGAAAAGGACACCCAGTTTCTGCCACTACT...TATGCCTTTGACTTCTCTGTTGTGTTTTAAAGAAATTCCGTAGCATTCAGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| 3UTR CCA 72 bp | CTCCAAGACGTGAGCTTTCTTGTCTCAGCTGAATGTTaGGCTCATGTCTGTCGTCTTGGCAAGGTTTCTCAC | + |
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Preference number: 3 (lower is better) Translates to: LQDVSFLVSAEC*AHVCRLGKVSH Trigger: GTGAGAAACCTTGCCAAGACGACAGACATGAGCCCAACATTCAGCTGAGACAAGAAAGCTCACGTCTTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| 3UTR GCA 72 bp | CGTCTACCAACGTCATCACAACAGAAAAGGCACAAGTaGCTAGCAGTGACTAAACAGTGGAAACTAAAGAAC | + |
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Preference number: 3 (lower is better) Translates to: RLPTSSQQKRHK*LAVTKQWKLKN Trigger: GTTCTTTAGTTTCCACTGTTTAGTCACTGCTAGGCACTTGTGCCTTTTCTGTTGTGATGACGTTGGTAGACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| 3UTR GCA 72 bp | GATGGTACACAGATGAACAACAAGCTCAAACTGGAGTaGAAACACCTTTTCAATGCGGGTTTTAGCTGGAAA | + |
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Preference number: 3 (lower is better) Translates to: DGTQMNNKLKLE*KHLFNAGFSWK Trigger: TTTCCAGCTAAAACCCGCATTGAAAAGGTGTTTGCACTCCAGTTTGAGCTTGTTGTTCATCTGTGTACCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| 3UTR TCA 72 bp | TGCCTAGCAGTGACTAAACAGTGGAAACTAAAGAACTaGATGCTACGGAATTTCTTTAAAACACAACAGAGA | + |
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Preference number: 3 (lower is better) Translates to: CLAVTKQWKLKN*MLRNFFKTQQR Trigger: TCTCTGTTGTGTTTTAAAGAAATTCCGTAGCATTCAGTTCTTTAGTTTCCACTGTTTAGTCACTGCTAGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| 3UTR TCA 72 bp | TGGAAGGATATTTTGTTTGGAAGAGGCTTCAACAATTaGAAGAGAACTCCAGGTTATCTTTTTGACTCTTAT | + |
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Preference number: 3 (lower is better) Translates to: WKDILFGRGFNN*KRTPGYLFDSY Trigger: ATAAGAGTCAAAAAGATAACCTGGAGTTCTCTTTCAATTGTTGAAGCCTCTTCCAAACAAAATATCCTTCCA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR GCA 90 bp | GTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCCCTGGTGAGGCCGCCGCCGCCTaGAGTTGCGGGGACTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: VLFQATSYPSSVSQNIPGEAAAA*SCGDLG Trigger: GCCCAAGTCCCCGCAACTGCAGGCGGCGGCGGCCTC...ACCAGGGATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023849.15 ENSMUST00000167780.2 |
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| CDS-3UTR TCA 90 bp | GTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCCCTGGTGTCACAGCCCTGAGCTaGCCGGAACCGCTCCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: VLFQATSYPSSVSQNIPGVTALS*PEPLPA Trigger: GGCTGGGAGCGGTTCCGGTCAGCTCAGGGCTGTGAC...ACCAGGGATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR TCA 90 bp | AGTAGTGGCAGAAACTGGGTGTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGAGGAGGTCACAGCCCTaGGCTGACCGGAACCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SSGRNWVSFSRQLPILVQRRSQP*ADRNRS Trigger: GGAGCGGTTCCGGTCAGCTCAGGGCTGTGACCTCCT...CTGAACTAGGATAGGAAGTTGCCTGGAAAAGGACACCCAGTTTCTGCCACTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR GCA 90 bp | GTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCCCTGGTGCCGCCGCCTGCAGTTaGGGGGACTTGGGCCGAGAT | + |
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Preference number: 4 (lower is better) Translates to: VLFQATSYPSSVSQNIPGAAACS*GDLGRD Trigger: ATCTCGGCCCAAGTCCCCGCAACTGCAGGCGGCGGC...ACCAGGGATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023849.15 ENSMUST00000167780.2 |
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| CDS-3UTR CCA 90 bp | GCCCAAGCTGGCCTCCAAGACGTGAGCTTTCTTGTCTCAGCTGAATGTTGGGCTTGGGAGAGTGGCTGCTaGAGCAATCTGTCCTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: AQAGLQDVSFLVSAECWAWESGC*SNLSSG Trigger: ACCTGAGGACAGATTGCTCCAGCAGCCACTCTCCCA...AGCCCAACATTCAGCTGAGACAAGAAAGCTCACGTCTTGGAGGCCAGCTTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR TCA 90 bp | TCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCCCTGGTTGTCACAGCCCTGAGCTaGCCGGAACCGCTCCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SFSRQLPILVQFPKTSLVVTALS*PEPLPA Trigger: GGCTGGGAGCGGTTCCGGTCAGCTCAGGGCTGTGAC...AACCAGGGATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR TCA 90 bp | AAAGCACATCCCAGGAGAAGTGATTGGAGTAATCTTCACACGTCTACCAACGTCAGGAGGTCACAGCCCTaGGCTGACCGGAACCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: KAHPRRSDWSNLHTSTNVRRSQP*ADRNRS Trigger: GGAGCGGTTCCGGTCAGCTCAGGGCTGTGACCTCCT...GACGTTGGTAGACGTGTGAAGATTACTCCAATCACTTCTCCTGGGATGTGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR TCA 90 bp | GCCCAAGCTGGCCTCCAAGACGTGAGCTTTCTTGTCTCAGCTGAATGTTGGGCTTCTTTGCTCCCTGGGTaGTGTTCTGCAGGTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: AQAGLQDVSFLVSAECWASLLPG*CSAGSG Trigger: TCCAGAACCTGCAGAACATCACCCAGGGAGCAAAGA...AGCCCAACATTCAGCTGAGACAAGAAAGCTCACGTCTTGGAGGCCAGCTTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR GCA 90 bp | AGTAGTGGCAGAAACTGGGTGTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGCGGGGTGGCCGAGTGTaGAGAACAGCCCTGCATTCC | + |
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Preference number: 4 (lower is better) Translates to: SSGRNWVSFSRQLPILVQRGGRV*RTALHS Trigger: GGAATGCAGGGCTGTTCTGCACACTCGGCCACCCCG...CTGAACTAGGATAGGAAGTTGCCTGGAAAAGGACACCCAGTTTCTGCCACTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR GCA 90 bp | GCCCAAGCTGGCCTCCAAGACGTGAGCTTTCTTGTCTCAGCTGAATGTTGGGCTGATCAGGGGGATCTTTaGTCCCTGGGTGATGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: AQAGLQDVSFLVSAECWADQGDL*SLGDVL Trigger: CAGAACATCACCCAGGGAGCAAAGATCCCCCTGATC...AGCCCAACATTCAGCTGAGACAAGAAAGCTCACGTCTTGGAGGCCAGCTTGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR TCA 90 bp | ATGGTAGAGGATGGTACACAGATGAACAACAAGCTCAAACTGGAGTGCAAACACAGGAGGTCACAGCCCTaGGCTGACCGGAACCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: MVEDGTQMNNKLKLECKHRRSQP*ADRNRS Trigger: GGAGCGGTTCCGGTCAGCTCAGGGCTGTGACCTCCT...GTGTTTGCACTCCAGTTTGAGCTTGTTGTTCATCTGTGTACCATCCTCTACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR TCA 90 bp | AAAGCACATCCCAGGAGAAGTGATTGGAGTAATCTTCACACGTCTACCAACGTCGTGGCGACACTCGCCTaGGGTCCGGATCTTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: KAHPRRSDWSNLHTSTNVVATLA*GPDLPG Trigger: ACCTGGAAGATCCGGACCTCAGGCGAGTGTCGCCAC...GACGTTGGTAGACGTGTGAAGATTACTCCAATCACTTCTCCTGGGATGTGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR TCA 90 bp | CCAGTCATCTGGCTTTTTCAAGAAAGGGTCTTGACATATAGCCCAAGCTGGCCTGATCCAGGGCGGACGTaGCACTCAGAGCATGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: PVIWLFQERVLTYSPSWPDPGRT*HSEHVW Trigger: CCAGACATGCTCTGAGTGTCACGTCCGCCCTGGATC...AGGCCAGCTTGGGCTATATGTCAAGACCCTTTCTTGAAAAAGCCAGATGACTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR TCA 90 bp | TCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCCCTGGTTGTGGCGACACTCGCCTaGGGTCCGGATCTTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SFSRQLPILVQFPKTSLVVATLA*GPDLPG Trigger: ACCTGGAAGATCCGGACCTCAGGCGAGTGTCGCCAC...AACCAGGGATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR TCA 90 bp | CTGGGTGTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCGATCCAGGGCGGACGTaGCACTCAGAGCATGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LGVLFQATSYPSSVSQNIDPGRT*HSEHVW Trigger: CCAGACATGCTCTGAGTGTCACGTCCGCCCTGGATC...GATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGACACCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR TCA 90 bp | GTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCCCTGGTGATCCAGGGCGGACGTaGCACTCAGAGCATGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: VLFQATSYPSSVSQNIPGDPGRT*HSEHVW Trigger: CCAGACATGCTCTGAGTGTCACGTCCGCCCTGGATC...ACCAGGGATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR GCA 90 bp | AGAGCTGTTCCTAAAGCTACTTATAAAAAGCACATCCCAGGAGAAGTGATTGGAGCCGCCGCCTGCAGTTaGGGGGACTTGGGCCGAGAT | + |
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Preference number: 4 (lower is better) Translates to: RAVPKATYKKHIPGEVIGAAACS*GDLGRD Trigger: ATCTCGGCCCAAGTCCCCGCAACTGCAGGCGGCGGC...TCCAATCACTTCTCCTGGGATGTGCTTTTTATAAGTAGCTTTAGGAACAGCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023849.15 ENSMUST00000167780.2 |
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| CDS-3UTR GCA 90 bp | AGGATATTTTGTTTGGAAGAGGCTTCAACAATTGAAAGAGAACTCCAGGTTATCGAGGCCGCCGCCGCCTaGAGTTGCGGGGACTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: RIFCLEEASTIERELQVIEAAAA*SCGDLG Trigger: GCCCAAGTCCCCGCAACTGCAGGCGGCGGCGGCCTC...GATAACCTGGAGTTCTCTTTCAATTGTTGAAGCCTCTTCCAAACAAAATATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023849.15 ENSMUST00000167780.2 |
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| CDS-3UTR CCA 90 bp | AACAAGCTCAAACTGGAGTGCAAACACCTTTTCAATGCGGGTTTTAGCTGGAAACCGCTGGTAGCGGGGTaGCCGAGTGTGCAGAACAGC | + |
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Preference number: 4 (lower is better) Translates to: NKLKLECKHLFNAGFSWKPLVAG*PSVQNS Trigger: GCTGTTCTGCACACTCGGCCACCCCGCTACCAGCGG...TTTCCAGCTAAAACCCGCATTGAAAAGGTGTTTGCACTCCAGTTTGAGCTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR CCA 90 bp | GCCCAAGCTGGCCTCCAAGACGTGAGCTTTCTTGTCTCAGCTGAATGTTGGGCTCAGTCTACTGAGGAGTaGCTGGAAGGTGTCAAAGTA | + |
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Preference number: 4 (lower is better) Translates to: AQAGLQDVSFLVSAECWAQSTEE*LEGVKV Trigger: TACTTTGACACCTTCCAGCCACTCCTCAGTAGACTG...AGCCCAACATTCAGCTGAGACAAGAAAGCTCACGTCTTGGAGGCCAGCTTGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR TCA 90 bp | CTGGGTGTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCAAGTACTCCGGGTGCTaGGCAGCTGCACTGCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: LGVLFQATSYPSSVSQNIKYSGC*AAALLL Trigger: CAACAGCAGTGCAGCTGCTCAGCACCCGGAGTACTT...GATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGACACCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR TCA 90 bp | AAAGCACATCCCAGGAGAAGTGATTGGAGTAATCTTCACACGTCTACCAACGTCAAGTACTCCGGGTGCTaGGCAGCTGCACTGCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: KAHPRRSDWSNLHTSTNVKYSGC*AAALLL Trigger: CAACAGCAGTGCAGCTGCTCAGCACCCGGAGTACTT...GACGTTGGTAGACGTGTGAAGATTACTCCAATCACTTCTCCTGGGATGTGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR TCA 90 bp | GTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCCCTGGTTCCTCTCTTCCCATTTaGGCGCTTCCACGGGGCACT | + |
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Preference number: 4 (lower is better) Translates to: VLFQATSYPSSVSQNIPGSSLPI*ALPRGT Trigger: AGTGCCCCGTGGAAGCGCTCAAATGGGAAGAGAGGA...ACCAGGGATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR TCA 90 bp | GTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCCCTGGTGGTAGCCCAGTCTACTaGGGAGTGGCTGGAAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: VLFQATSYPSSVSQNIPGGSPVY*GVAGRC Trigger: ACACCTTCCAGCCACTCCTCAGTAGACTGGGCTACC...ACCAGGGATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR CCA 90 bp | AGTAGTGGCAGAAACTGGGTGTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGACGCGAATGGGAGAGTaGCTGCTGGAGCAATCTGTC | + |
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Preference number: 4 (lower is better) Translates to: SSGRNWVSFSRQLPILVQTRMGE*LLEQSV Trigger: GACAGATTGCTCCAGCAGCCACTCTCCCATTCGCGT...CTGAACTAGGATAGGAAGTTGCCTGGAAAAGGACACCCAGTTTCTGCCACTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR TCA 90 bp | TCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCCCTGGTTGGTAGCCCAGTCTACTaGGGAGTGGCTGGAAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: SFSRQLPILVQFPKTSLVGSPVY*GVAGRC Trigger: ACACCTTCCAGCCACTCCTCAGTAGACTGGGCTACC...AACCAGGGATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR TCA 90 bp | AGGATATTTTGTTTGGAAGAGGCTTCAACAATTGAAAGAGAACTCCAGGTTATCGTCACAGCCCTGAGCTaGCCGGAACCGCTCCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: RIFCLEEASTIERELQVIVTALS*PEPLPA Trigger: GGCTGGGAGCGGTTCCGGTCAGCTCAGGGCTGTGAC...GATAACCTGGAGTTCTCTTTCAATTGTTGAAGCCTCTTCCAAACAAAATATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR GCA 90 bp | TCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCCCTGGTTCTCTTCGGTTGGCTCTaGGTTGAAGTCCCCGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: SFSRQLPILVQFPKTSLVLFGWL*VEVPAD Trigger: GTCTGCGGGGACTTCAACGCAGAGCCAACCGAAGAG...AACCAGGGATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR CCA 90 bp | AGTAGTGGCAGAAACTGGGTGTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGATGGTGACCAGGGCTTaGGGAAAAACGTGCCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: SSGRNWVSFSRQLPILVQMVTRA*GKTCLG Trigger: ACCAAGGCACGTTTTTCCCCAAGCCCTGGTCACCAT...CTGAACTAGGATAGGAAGTTGCCTGGAAAAGGACACCCAGTTTCTGCCACTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR TCA 90 bp | TGGAGTGCAAACACCTTTTCAATGCGGGTTTTAGCTGGAAAGGTTTGTGAACAAAAGTACTCCGGGTGCTaGGCAGCTGCACTGCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: WSANTFSMRVLAGKVCEQKYSGC*AAALLL Trigger: CAACAGCAGTGCAGCTGCTCAGCACCCGGAGTACTT...TTGTTCACAAACCTTTCCAGCTAAAACCCGCATTGAAAAGGTGTTTGCACTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR TCA 90 bp | GTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCCCTGGTCAATCTGTTCTTCAGTaGGTAGATCCAGGGCGGACG | + |
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Preference number: 4 (lower is better) Translates to: VLFQATSYPSSVSQNIPGQSVLQ*VDPGRT Trigger: CGTCCGCCCTGGATCTACTCACTGAAGAACAGATTG...ACCAGGGATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR GCA 90 bp | GTTCCTAAAGCTACTTATAAAAAGCACATCCCAGGAGAAGTGATTGGAGTAATCCGGGGTGGCCGAGTGTaGAGAACAGCCCTGCATTCC | + |
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Preference number: 4 (lower is better) Translates to: VPKATYKKHIPGEVIGVIRGGRV*RTALHS Trigger: GGAATGCAGGGCTGTTCTGCACACTCGGCCACCCCG...GATTACTCCAATCACTTCTCCTGGGATGTGCTTTTTATAAGTAGCTTTAGGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR GCA 90 bp | GTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCCCTGGTGAATGGGAGAGTGGCTaGTGGAGCAATCTGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLFQATSYPSSVSQNIPGEWESG*WSNLSS Trigger: TGAGGACAGATTGCTCCAGCAGCCACTCTCCCATTC...ACCAGGGATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCACATCCCAGGAGAAGTGATTGGAGTAATCTTCACACGTCTACCAACGTCGCTTGGGGAAAAACGTaGCTTGGTAGCCCAGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: KAHPRRSDWSNLHTSTNVAWGKT*LGSPVY Trigger: GTAGACTGGGCTACCAAGGCACGTTTTTCCCCAAGC...GACGTTGGTAGACGTGTGAAGATTACTCCAATCACTTCTCCTGGGATGTGCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGTGTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCGCTTGGGGAAAAACGTaGCTTGGTAGCCCAGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LGVLFQATSYPSSVSQNIAWGKT*LGSPVY Trigger: GTAGACTGGGCTACCAAGGCACGTTTTTCCCCAAGC...GATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGACACCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGTGCAAACACCTTTTCAATGCGGGTTTTAGCTGGAAAGGTTTGTGAACAACTCTTCGGTTGGCTCTaGGTTGAAGTCCCCGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: WSANTFSMRVLAGKVCEQLFGWL*VEVPAD Trigger: GTCTGCGGGGACTTCAACGCAGAGCCAACCGAAGAG...TTGTTCACAAACCTTTCCAGCTAAAACCCGCATTGAAAAGGTGTTTGCACTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR CCA 90 bp | ATGGTAGAGGATGGTACACAGATGAACAACAAGCTCAAACTGGAGTGCAAACACACGCGAATGGGAGAGTaGCTGCTGGAGCAATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: MVEDGTQMNNKLKLECKHTRMGE*LLEQSV Trigger: GACAGATTGCTCCAGCAGCCACTCTCCCATTCGCGT...GTGTTTGCACTCCAGTTTGAGCTTGTTGTTCATCTGTGTACCATCCTCTACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR CCA 90 bp | GTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCCCTGGTGAGGCACAGTATGTCTaGCTGGTAAGCCAGGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLFQATSYPSSVSQNIPGEAQYV*LVSQDL Trigger: GAGATCCTGGCTTACCAGCCAGACATACTGTGCCTC...ACCAGGGATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR CCA 90 bp | AGTAGTGGCAGAAACTGGGTGTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGGTGCGGGCTTTTAAGTaGGTGACAGCAATGCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSGRNWVSFSRQLPILVQVRAFK*VTAMQN Trigger: GTTCTGCATTGCTGTCACCCACTTAAAAGCCCGCAC...CTGAACTAGGATAGGAAGTTGCCTGGAAAAGGACACCCAGTTTCTGCCACTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR CCA 90 bp | ATGGTAGAGGATGGTACACAGATGAACAACAAGCTCAAACTGGAGTGCAAACACAGGATGGGAGCCGGTTaGGCCCAATCTGTTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: MVEDGTQMNNKLKLECKHRMGAG*AQSVLQ Trigger: CTGAAGAACAGATTGGGCCCAACCGGCTCCCATCCT...GTGTTTGCACTCCAGTTTGAGCTTGTTGTTCATCTGTGTACCATCCTCTACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCTGTTCCTAAAGCTACTTATAAAAAGCACATCCCAGGAGAAGTGATTGGAGGTAGCCCAGTCTACTaGGGAGTGGCTGGAAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RAVPKATYKKHIPGEVIGGSPVY*GVAGRC Trigger: ACACCTTCCAGCCACTCCTCAGTAGACTGGGCTACC...TCCAATCACTTCTCCTGGGATGTGCTTTTTATAAGTAGCTTTAGGAACAGCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCCCTGGTTTCTTTGCTCCCTGGGTaGTGTTCTGCAGGTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SFSRQLPILVQFPKTSLVSLLPG*CSAGSG Trigger: TCCAGAACCTGCAGAACATCACCCAGGGAGCAAAGA...AACCAGGGATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR TCA 90 bp | ATGGTAGAGGATGGTACACAGATGAACAACAAGCTCAAACTGGAGTGCAAACACTCTTTGCTCCCTGGGTaGTGTTCTGCAGGTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MVEDGTQMNNKLKLECKHSLLPG*CSAGSG Trigger: TCCAGAACCTGCAGAACATCACCCAGGGAGCAAAGA...GTGTTTGCACTCCAGTTTGAGCTTGTTGTTCATCTGTGTACCATCCTCTACCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR TCA 90 bp | AGGATATTTTGTTTGGAAGAGGCTTCAACAATTGAAAGAGAACTCCAGGTTATCGTGGCGACACTCGCCTaGGGTCCGGATCTTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RIFCLEEASTIERELQVIVATLA*GPDLPG Trigger: ACCTGGAAGATCCGGACCTCAGGCGAGTGTCGCCAC...GATAACCTGGAGTTCTCTTTCAATTGTTGAAGCCTCTTCCAAACAAAATATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR TCA 90 bp | ATGGTAGAGGATGGTACACAGATGAACAACAAGCTCAAACTGGAGTGCAAACACCAATCTGTTCTTCAGTaGGTAGATCCAGGGCGGACG | + |
|
Preference number: 4 (lower is better) Translates to: MVEDGTQMNNKLKLECKHQSVLQ*VDPGRT Trigger: CGTCCGCCCTGGATCTACTCACTGAAGAACAGATTG...GTGTTTGCACTCCAGTTTGAGCTTGTTGTTCATCTGTGTACCATCCTCTACCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCCCTGGTTCAATCTGTTCTTCAGTaGGTAGATCCAGGGCGGACG | + |
|
Preference number: 4 (lower is better) Translates to: SFSRQLPILVQFPKTSLVQSVLQ*VDPGRT Trigger: CGTCCGCCCTGGATCTACTCACTGAAGAACAGATTG...AACCAGGGATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGTGTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCTGTAGAGTCGACTGGTaGCGTTTCCCATGGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGVLFQATSYPSSVSQNICRVDW*RFPWNS Trigger: TGAGTTCCATGGGAAACGGCACCAGTCGACTCTACA...GATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGACACCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023849.15 ENSMUST00000167780.2 |
||
| CDS-3UTR GCA 90 bp | TCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCCCTGGTTGAATGGGAGAGTGGCTaGTGGAGCAATCTGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SFSRQLPILVQFPKTSLVEWESG*WSNLSS Trigger: TGAGGACAGATTGCTCCAGCAGCCACTCTCCCATTC...AACCAGGGATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR GCA 90 bp | AGAGCTGTTCCTAAAGCTACTTATAAAAAGCACATCCCAGGAGAAGTGATTGGACTCTTCGGTTGGCTCTaGGTTGAAGTCCCCGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RAVPKATYKKHIPGEVIGLFGWL*VEVPAD Trigger: GTCTGCGGGGACTTCAACGCAGAGCCAACCGAAGAG...TCCAATCACTTCTCCTGGGATGTGCTTTTTATAAGTAGCTTTAGGAACAGCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR CCA 90 bp | TCTAGAAAACTTCCTACATCTTACTTTAATTCTGAAGGGCTTACAAACTGGGTTCCGCTGGTAGCGGGGTaGCCGAGTGTGCAGAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRKLPTSYFNSEGLTNWVPLVAG*PSVQNS Trigger: GCTGTTCTGCACACTCGGCCACCCCGCTACCAGCGG...AACCCAGTTTGTAAGCCCTTCAGAATTAAAGTAAGATGTAGGAAGTTTTCTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR CCA 90 bp | AGAACTGAATGCTACGGAATTTCTTTAAAACACAACAGAGAAGTCAAAGGCATACCGCTGGTAGCGGGGTaGCCGAGTGTGCAGAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RTECYGISLKHNREVKGIPLVAG*PSVQNS Trigger: GCTGTTCTGCACACTCGGCCACCCCGCTACCAGCGG...TATGCCTTTGACTTCTCTGTTGTGTTTTAAAGAAATTCCGTAGCATTCAGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR CCA 90 bp | ATGGTAGAGGATGGTACACAGATGAACAACAAGCTCAAACTGGAGTGCAAACACGAGGCACAGTATGTCTaGCTGGTAAGCCAGGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: MVEDGTQMNNKLKLECKHEAQYV*LVSQDL Trigger: GAGATCCTGGCTTACCAGCCAGACATACTGTGCCTC...GTGTTTGCACTCCAGTTTGAGCTTGTTGTTCATCTGTGTACCATCCTCTACCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGTGTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCCCAGGGTCTGTGCGATaGCCACCTGATTGGTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LGVLFQATSYPSSVSQNIPGSVR*PPDWFL Trigger: TAAAAACCAATCAGGTGGCCATCGCACAGACCCTGG...GATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGACACCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCACATCCCAGGAGAAGTGATTGGAGTAATCTTCACACGTCTACCAACGTCCCAGGGTCTGTGCGATaGCCACCTGATTGGTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KAHPRRSDWSNLHTSTNVPGSVR*PPDWFL Trigger: TAAAAACCAATCAGGTGGCCATCGCACAGACCCTGG...GACGTTGGTAGACGTGTGAAGATTACTCCAATCACTTCTCCTGGGATGTGCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR CCA 90 bp | GTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCCCTGGTGTGCGGGCTTTTAAGTaGGTGACAGCAATGCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VLFQATSYPSSVSQNIPGVRAFK*VTAMQN Trigger: GTTCTGCATTGCTGTCACCCACTTAAAAGCCCGCAC...ACCAGGGATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR CCA 90 bp | AACAAGCTCAAACTGGAGTGCAAACACCTTTTCAATGCGGGTTTTAGCTGGAAAAGGATGGGAGCCGGTTaGGCCCAATCTGTTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NKLKLECKHLFNAGFSWKRMGAG*AQSVLQ Trigger: CTGAAGAACAGATTGGGCCCAACCGGCTCCCATCCT...TTTCCAGCTAAAACCCGCATTGAAAAGGTGTTTGCACTCCAGTTTGAGCTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCCCTGGTTGGGCTTTTAAGTGGGTaGCAGCAATGCAGAACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFSRQLPILVQFPKTSLVGLLSG*QQCRTV Trigger: GACAGTTCTGCATTGCTGTCACCCACTTAAAAGCCC...AACCAGGGATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCACATCCCAGGAGAAGTGATTGGAGTAATCTTCACACGTCTACCAACGTCCAGTCTACTGAGGAGTaGCTGGAAGGTGTCAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KAHPRRSDWSNLHTSTNVQSTEE*LEGVKV Trigger: TACTTTGACACCTTCCAGCCACTCCTCAGTAGACTG...GACGTTGGTAGACGTGTGAAGATTACTCCAATCACTTCTCCTGGGATGTGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR CCA 90 bp | AACAAGCTCAAACTGGAGTGCAAACACCTTTTCAATGCGGGTTTTAGCTGGAAAATGGTGACCAGGGCTTaGGGAAAAACGTGCCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NKLKLECKHLFNAGFSWKMVTRA*GKTCLG Trigger: ACCAAGGCACGTTTTTCCCCAAGCCCTGGTCACCAT...TTTCCAGCTAAAACCCGCATTGAAAAGGTGTTTGCACTCCAGTTTGAGCTTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| 3UTR CAA 72 bp | TTGAATCCAGTCATCTGGCTTTTTCAAGAAAGGGTCTaGACATATAGCCCAAGCTGGCCTCCAAGACGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LNPVIWLFQERV*TYSPSWPPRRE Trigger: CTCACGTCTTGGAGGCCAGCTTGGGCTATATGTCAAGACCCTTTCTTGAAAAAGCCAGATGACTGGATTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR TCA 90 bp | AACAAGCTCAAACTGGAGTGCAAACACCTTTTCAATGCGGGTTTTAGCTGGAAAGGGCTTTTAAGTGGGTaGCAGCAATGCAGAACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NKLKLECKHLFNAGFSWKGLLSG*QQCRTV Trigger: GACAGTTCTGCATTGCTGTCACCCACTTAAAAGCCC...TTTCCAGCTAAAACCCGCATTGAAAAGGTGTTTGCACTCCAGTTTGAGCTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR GCA 90 bp | AGAGCTGTTCCTAAAGCTACTTATAAAAAGCACATCCCAGGAGAAGTGATTGGAGATCAGGGGGATCTTTaGTCCCTGGGTGATGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RAVPKATYKKHIPGEVIGDQGDL*SLGDVL Trigger: CAGAACATCACCCAGGGAGCAAAGATCCCCCTGATC...TCCAATCACTTCTCCTGGGATGTGCTTTTTATAAGTAGCTTTAGGAACAGCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCTGTTCCTAAAGCTACTTATAAAAAGCACATCCCAGGAGAAGTGATTGGAATGGTGACCAGGGCTTaGGGAAAAACGTGCCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RAVPKATYKKHIPGEVIGMVTRA*GKTCLG Trigger: ACCAAGGCACGTTTTTCCCCAAGCCCTGGTCACCAT...TCCAATCACTTCTCCTGGGATGTGCTTTTTATAAGTAGCTTTAGGAACAGCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR TCA 90 bp | AGAACTGAATGCTACGGAATTTCTTTAAAACACAACAGAGAAGTCAAAGGCATATCCTCTCTTCCCATTTaGGCGCTTCCACGGGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: RTECYGISLKHNREVKGISSLPI*ALPRGT Trigger: AGTGCCCCGTGGAAGCGCTCAAATGGGAAGAGAGGA...TATGCCTTTGACTTCTCTGTTGTGTTTTAAAGAAATTCCGTAGCATTCAGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCTGTTCCTAAAGCTACTTATAAAAAGCACATCCCAGGAGAAGTGATTGGAGGGCTTTTAAGTGGGTaGCAGCAATGCAGAACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RAVPKATYKKHIPGEVIGGLLSG*QQCRTV Trigger: GACAGTTCTGCATTGCTGTCACCCACTTAAAAGCCC...TCCAATCACTTCTCCTGGGATGTGCTTTTTATAAGTAGCTTTAGGAACAGCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR GCA 90 bp | GTTCCTAAAGCTACTTATAAAAAGCACATCCCAGGAGAAGTGATTGGAGTAATCGCTTGGGGAAAAACGTaGCTTGGTAGCCCAGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VPKATYKKHIPGEVIGVIAWGKT*LGSPVY Trigger: GTAGACTGGGCTACCAAGGCACGTTTTTCCCCAAGC...GATTACTCCAATCACTTCTCCTGGGATGTGCTTTTTATAAGTAGCTTTAGGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR CCA 90 bp | GTTCCTAAAGCTACTTATAAAAAGCACATCCCAGGAGAAGTGATTGGAGTAATCCACTGTAGAGTCGACTaGTGCCGTTTCCCATGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VPKATYKKHIPGEVIGVIHCRVD*CRFPWN Trigger: GTTCCATGGGAAACGGCACCAGTCGACTCTACAGTG...GATTACTCCAATCACTTCTCCTGGGATGTGCTTTTTATAAGTAGCTTTAGGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023849.15 ENSMUST00000167780.2 |
||
| CDS-3UTR CCA 90 bp | AACAAGCTCAAACTGGAGTGCAAACACCTTTTCAATGCGGGTTTTAGCTGGAAACAGTCTACTGAGGAGTaGCTGGAAGGTGTCAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NKLKLECKHLFNAGFSWKQSTEE*LEGVKV Trigger: TACTTTGACACCTTCCAGCCACTCCTCAGTAGACTG...TTTCCAGCTAAAACCCGCATTGAAAAGGTGTTTGCACTCCAGTTTGAGCTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCTGTTCCTAAAGCTACTTATAAAAAGCACATCCCAGGAGAAGTGATTGGACCAGGGTCTGTGCGATaGCCACCTGATTGGTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RAVPKATYKKHIPGEVIGPGSVR*PPDWFL Trigger: TAAAAACCAATCAGGTGGCCATCGCACAGACCCTGG...TCCAATCACTTCTCCTGGGATGTGCTTTTTATAAGTAGCTTTAGGAACAGCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR CCA 90 bp | AGAACTGAATGCTACGGAATTTCTTTAAAACACAACAGAGAAGTCAAAGGCATAACGCGAATGGGAGAGTaGCTGCTGGAGCAATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RTECYGISLKHNREVKGITRMGE*LLEQSV Trigger: GACAGATTGCTCCAGCAGCCACTCTCCCATTCGCGT...TATGCCTTTGACTTCTCTGTTGTGTTTTAAAGAAATTCCGTAGCATTCAGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| 3UTR CAA 72 bp | TTGTCTCAGCTGAATGTTGGGCTCATGTCTGTCGTCTaGGCAAGGTTTCTCACTAATATTCTTAGCAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSQLNVGLMSVV*ARFLTNILSNC Trigger: ACAGTTGCTAAGAATATTAGTGAGAAACCTTGCCAAGACGACAGACATGAGCCCAACATTCAGCTGAGACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR GCA 90 bp | AGGATATTTTGTTTGGAAGAGGCTTCAACAATTGAAAGAGAACTCCAGGTTATCTGTGCAGAACAGCCCTaGATTCCTCCAGAAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RIFCLEEASTIERELQVICAEQP*IPPEVP Trigger: AGGAACTTCTGGAGGAATGCAGGGCTGTTCTGCACA...GATAACCTGGAGTTCTCTTTCAATTGTTGAAGCCTCTTCCAAACAAAATATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR GCA 90 bp | AGAACTGAATGCTACGGAATTTCTTTAAAACACAACAGAGAAGTCAAAGGCATAGAATGGGAGAGTGGCTaGTGGAGCAATCTGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RTECYGISLKHNREVKGIEWESG*WSNLSS Trigger: TGAGGACAGATTGCTCCAGCAGCCACTCTCCCATTC...TATGCCTTTGACTTCTCTGTTGTGTTTTAAAGAAATTCCGTAGCATTCAGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS-3UTR GCA 90 bp | TCTAGAAAACTTCCTACATCTTACTTTAATTCTGAAGGGCTTACAAACTGGGTTGATCAGGGGGATCTTTaGTCCCTGGGTGATGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRKLPTSYFNSEGLTNWVDQGDL*SLGDVL Trigger: CAGAACATCACCCAGGGAGCAAAGATCCCCCTGATC...AACCCAGTTTGTAAGCCCTTCAGAATTAAAGTAAGATGTAGGAAGTTTTCTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR GCA 90 bp | AGAACTGAATGCTACGGAATTTCTTTAAAACACAACAGAGAAGTCAAAGGCATATGTGCAGAACAGCCCTaGATTCCTCCAGAAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RTECYGISLKHNREVKGICAEQP*IPPEVP Trigger: AGGAACTTCTGGAGGAATGCAGGGCTGTTCTGCACA...TATGCCTTTGACTTCTCTGTTGTGTTTTAAAGAAATTCCGTAGCATTCAGTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS CCA 90 bp | ACCTCGCGGCGCCCGAGGCCGCCGCCGCCTGCAGTTGCGGGGACTTaGGCCGAGATCCGAGCACCGGCGGGGCGAGCGTTCGGCGCGGGC | + |
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Preference number: 5 (lower is better) Translates to: TSRRPRPPPPAVAGT*AEIRAPAGRAFGAG Trigger: GCCCGCGCCGAACGCTCGCCCCGCCGGTGCTCGGATCTCGGCCCAAGTCCCCGCAACTGCAGGCGGCGGCGGCCTCGGGCGCCGCGAGGT 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023849.15 ENSMUST00000167780.2 |
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| CDS TCA 90 bp | ATGTCTGGAGTACCAGATATAGTCCAGCGTGTGGCGACACTCGCCTaGGGTCCGGATCTTCCAGGTTGTGTAGGGAGGCTCCGACTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: MSGVPDIVQRVATLA*GPDLPGCVGRLRLS Trigger: GGACAGTCGGAGCCTCCCTACACAACCTGGAAGATCCGGACCTCAGGCGAGTGTCGCCACACGCTGGACTATATCTGGTACTCCAGACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR CAA 90 bp | GCCCAAGCTGGCCTCCAAGACGTGAGCTTTCTTGTCTCAGCTGAATGTTGGGCTGCAGCTGCACTGCTGTaGACGGTCTTGGCGAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AQAGLQDVSFLVSAECWAAAALL*TVLARA Trigger: TGCTCTCGCCAAGACCGTCAACAGCAGTGCAGCTGC...AGCCCAACATTCAGCTGAGACAAGAAAGCTCACGTCTTGGAGGCCAGCTTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS TCA 90 bp | TGTCTTTGCCTTCTCCGAGAGCTTGGGCGAGGATGTTCCACTGCATaGCGCGAATGGGAGAGTGGCTGCTGGAGCAATCTGTCCTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CLCLLRELGRGCSTA*REWESGCWSNLSSG Trigger: ACCTGAGGACAGATTGCTCCAGCAGCCACTCTCCCATTCGCGTCATGCAGTGGAACATCCTCGCCCAAGCTCTCGGAGAAGGCAAAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 ENSMUST00000193018.2 |
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| CDS CCA 90 bp | GGGCTTGGGGAAAAACGTGCCTTGGTAGCCCAGTCTACTGAGGAGTaGCTGGAAGGTGTCAAAGTAGTGGTCCACTTCCTGGAGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: GLGEKRALVAQSTEE*LEGVKVVVHFLEAQ Trigger: CTGTGCCTCCAGGAAGTGGACCACTACTTTGACACCTTCCAGCCACTCCTCAGTAGACTGGGCTACCAAGGCACGTTTTTCCCCAAGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS CCA 90 bp | GAAGGTGTCAAAGTAGTGGTCCACTTCCTGGAGGCACAGTATGTCTaGCTGGTAAGCCAGGATCTCCTCCAGGATCAGGCACTTCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: EGVKVVVHFLEAQYV*LVSQDLLQDQALPL Trigger: GAGAGGAAGTGCCTGATCCTGGAGGAGATCCTGGCTTACCAGCCAGACATACTGTGCCTCCAGGAAGTGGACCACTACTTTGACACCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR CAA 90 bp | CCAGTCATCTGGCTTTTTCAAGAAAGGGTCTTGACATATAGCCCAAGCTGGCCTTCCGGATCTTCCAGGTaGTGTAGGGAGGCTCCGACT | + |
|
Preference number: 5 (lower is better) Translates to: PVIWLFQERVLTYSPSWPSGSSR*CREAPT Trigger: AGTCGGAGCCTCCCTACACAACCTGGAAGATCCGGA...AGGCCAGCTTGGGCTATATGTCAAGACCCTTTCTTGAAAAAGCCAGATGACTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR CAA 90 bp | CTGGGTGTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCCATGGTGACCAGGGCTaGGGGAAAAACGTGCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LGVLFQATSYPSSVSQNIHGDQG*GKNVPW Trigger: CCAAGGCACGTTTTTCCCCAAGCCCTGGTCACCATG...GATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGACACCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR CAA 90 bp | CTGGGTGTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCGGGGAAAAACGTGCCTaGGTAGCCCAGTCTACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LGVLFQATSYPSSVSQNIGEKRA*VAQSTE Trigger: CTCAGTAGACTGGGCTACCAAGGCACGTTTTTCCCC...GATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGACACCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR CAA 90 bp | AGAGCTGTTCCTAAAGCTACTTATAAAAAGCACATCCCAGGAGAAGTGATTGGAGCAGCTGCACTGCTGTaGACGGTCTTGGCGAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RAVPKATYKKHIPGEVIGAAALL*TVLARA Trigger: TGCTCTCGCCAAGACCGTCAACAGCAGTGCAGCTGC...TCCAATCACTTCTCCTGGGATGTGCTTTTTATAAGTAGCTTTAGGAACAGCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR CAA 90 bp | TGGAGTGCAAACACCTTTTCAATGCGGGTTTTAGCTGGAAAGGTTTGTGAACAATCCGGATCTTCCAGGTaGTGTAGGGAGGCTCCGACT | + |
|
Preference number: 5 (lower is better) Translates to: WSANTFSMRVLAGKVCEQSGSSR*CREAPT Trigger: AGTCGGAGCCTCCCTACACAACCTGGAAGATCCGGA...TTGTTCACAAACCTTTCCAGCTAAAACCCGCATTGAAAAGGTGTTTGCACTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR CAA 90 bp | AACAAGCTCAAACTGGAGTGCAAACACCTTTTCAATGCGGGTTTTAGCTGGAAAGGGGAAAAACGTGCCTaGGTAGCCCAGTCTACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: NKLKLECKHLFNAGFSWKGEKRA*VAQSTE Trigger: CTCAGTAGACTGGGCTACCAAGGCACGTTTTTCCCC...TTTCCAGCTAAAACCCGCATTGAAAAGGTGTTTGCACTCCAGTTTGAGCTTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR CAA 90 bp | CCAGTCATCTGGCTTTTTCAAGAAAGGGTCTTGACATATAGCCCAAGCTGGCCTGCTGTCAGCCTAATATaGGTGCTGCTGATAAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PVIWLFQERVLTYSPSWPAVSLI*VLLISL Trigger: CAAGCTTATCAGCAGCACCAATATTAGGCTGACAGC...AGGCCAGCTTGGGCTATATGTCAAGACCCTTTCTTGAAAAAGCCAGATGACTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR CAA 90 bp | AGAGCTGTTCCTAAAGCTACTTATAAAAAGCACATCCCAGGAGAAGTGATTGGATCCGGATCTTCCAGGTaGTGTAGGGAGGCTCCGACT | + |
|
Preference number: 5 (lower is better) Translates to: RAVPKATYKKHIPGEVIGSGSSR*CREAPT Trigger: AGTCGGAGCCTCCCTACACAACCTGGAAGATCCGGA...TCCAATCACTTCTCCTGGGATGTGCTTTTTATAAGTAGCTTTAGGAACAGCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR CAA 90 bp | CTGGGTGTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCCCATCTGGACCGTTGTaGTGTTCCACATCTAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: LGVLFQATSYPSSVSQNIPSGPL*CSTSRH Trigger: ATGTCTAGATGTGGAACACAACAACGGTCCAGATGG...GATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGACACCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR CAA 90 bp | GTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCCCTGGTGCTGTCAGCCTAATATaGGTGCTGCTGATAAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VLFQATSYPSSVSQNIPGAVSLI*VLLISL Trigger: CAAGCTTATCAGCAGCACCAATATTAGGCTGACAGC...ACCAGGGATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR CAA 90 bp | AGAACTGAATGCTACGGAATTTCTTTAAAACACAACAGAGAAGTCAAAGGCATAGCAGCTGCACTGCTGTaGACGGTCTTGGCGAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RTECYGISLKHNREVKGIAAALL*TVLARA Trigger: TGCTCTCGCCAAGACCGTCAACAGCAGTGCAGCTGC...TATGCCTTTGACTTCTCTGTTGTGTTTTAAAGAAATTCCGTAGCATTCAGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR CAA 90 bp | AGGATATTTTGTTTGGAAGAGGCTTCAACAATTGAAAGAGAACTCCAGGTTATCCATGGTGACCAGGGCTaGGGGAAAAACGTGCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RIFCLEEASTIERELQVIHGDQG*GKNVPW Trigger: CCAAGGCACGTTTTTCCCCAAGCCCTGGTCACCATG...GATAACCTGGAGTTCTCTTTCAATTGTTGAAGCCTCTTCCAAACAAAATATCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR CAA 90 bp | AGGATATTTTGTTTGGAAGAGGCTTCAACAATTGAAAGAGAACTCCAGGTTATCGGGGAAAAACGTGCCTaGGTAGCCCAGTCTACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RIFCLEEASTIERELQVIGEKRA*VAQSTE Trigger: CTCAGTAGACTGGGCTACCAAGGCACGTTTTTCCCC...GATAACCTGGAGTTCTCTTTCAATTGTTGAAGCCTCTTCCAAACAAAATATCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR CAA 90 bp | TCTAGAAAACTTCCTACATCTTACTTTAATTCTGAAGGGCTTACAAACTGGGTTCATGGTGACCAGGGCTaGGGGAAAAACGTGCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRKLPTSYFNSEGLTNWVHGDQG*GKNVPW Trigger: CCAAGGCACGTTTTTCCCCAAGCCCTGGTCACCATG...AACCCAGTTTGTAAGCCCTTCAGAATTAAAGTAAGATGTAGGAAGTTTTCTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR CAA 90 bp | AACAAGCTCAAACTGGAGTGCAAACACCTTTTCAATGCGGGTTTTAGCTGGAAACCATCTGGACCGTTGTaGTGTTCCACATCTAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: NKLKLECKHLFNAGFSWKPSGPL*CSTSRH Trigger: ATGTCTAGATGTGGAACACAACAACGGTCCAGATGG...TTTCCAGCTAAAACCCGCATTGAAAAGGTGTTTGCACTCCAGTTTGAGCTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR CAA 90 bp | GTCCTTTTCCAGGCAACTTCCTATCCTAGTTCAGTTTCCCAAAACATCCCTGGTGTGCTGCTGATAAGCTaGAATCGGTTTTGGAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: VLFQATSYPSSVSQNIPGVLLIS*NRFWRK Trigger: TTTTCTCCAAAACCGATTCAAGCTTATCAGCAGCAC...ACCAGGGATGTTTTGGGAAACTGAACTAGGATAGGAAGTTGCCTGGAAAAGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR CAA 90 bp | AACAAGCTCAAACTGGAGTGCAAACACCTTTTCAATGCGGGTTTTAGCTGGAAAGCTGTCAGCCTAATATaGGTGCTGCTGATAAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NKLKLECKHLFNAGFSWKAVSLI*VLLISL Trigger: CAAGCTTATCAGCAGCACCAATATTAGGCTGACAGC...TTTCCAGCTAAAACCCGCATTGAAAAGGTGTTTGCACTCCAGTTTGAGCTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR CAA 90 bp | AGGATATTTTGTTTGGAAGAGGCTTCAACAATTGAAAGAGAACTCCAGGTTATCGGGCACTGCACAAAGTaGTCTTTGCCTTCTCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RIFCLEEASTIERELQVIGHCTK*SLPSPR Trigger: TCTCGGAGAAGGCAAAGACAACTTTGTGCAGTGCCC...GATAACCTGGAGTTCTCTTTCAATTGTTGAAGCCTCTTCCAAACAAAATATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR CAA 90 bp | TCTAGAAAACTTCCTACATCTTACTTTAATTCTGAAGGGCTTACAAACTGGGTTGGGCACTGCACAAAGTaGTCTTTGCCTTCTCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SRKLPTSYFNSEGLTNWVGHCTK*SLPSPR Trigger: TCTCGGAGAAGGCAAAGACAACTTTGTGCAGTGCCC...AACCCAGTTTGTAAGCCCTTCAGAATTAAAGTAAGATGTAGGAAGTTTTCTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR CAA 90 bp | AGAACTGAATGCTACGGAATTTCTTTAAAACACAACAGAGAAGTCAAAGGCATACCATCTGGACCGTTGTaGTGTTCCACATCTAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: RTECYGISLKHNREVKGIPSGPL*CSTSRH Trigger: ATGTCTAGATGTGGAACACAACAACGGTCCAGATGG...TATGCCTTTGACTTCTCTGTTGTGTTTTAAAGAAATTCCGTAGCATTCAGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS-3UTR CAA 90 bp | GTTCCTAAAGCTACTTATAAAAAGCACATCCCAGGAGAAGTGATTGGAGTAATCGTGCTGCTGATAAGCTaGAATCGGTTTTGGAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: VPKATYKKHIPGEVIGVIVLLIS*NRFWRK Trigger: TTTTCTCCAAAACCGATTCAAGCTTATCAGCAGCAC...GATTACTCCAATCACTTCTCCTGGGATGTGCTTTTTATAAGTAGCTTTAGGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS CCA 72 bp | CGCCCGAGGCCGCCGCCGCCTGCAGTTGCGGGGACTTaGGCCGAGATCCGAGCACCGGCGGGGCGAGCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RPRPPPPAVAGT*AEIRAPAGRAF Trigger: GAACGCTCGCCCCGCCGGTGCTCGGATCTCGGCCCAAGTCCCCGCAACTGCAGGCGGCGGCGGCCTCGGGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023849.15 ENSMUST00000167780.2 |
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| CDS CCA 72 bp | CGAGAGCACTGTAGAGTCGACTGGTGCCGTTTCCCATaGAACTCACTGTTCGGGGACGCGACCTCGCGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: REHCRVDWCRFP*NSLFGDATSRR Trigger: GCGCCGCGAGGTCGCGTCCCCGAACAGTGAGTTCCATGGGAAACGGCACCAGTCGACTCTACAGTGCTCTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023849.15 ENSMUST00000167780.2 |
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| CDS CAA 90 bp | AGTCCAGCGTGTGGCGACACTCGCCTGAGGTCCGGATCTTCCAGGTaGTGTAGGGAGGCTCCGACTGTCCATCGGGACTCAGCAGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SPACGDTRLRSGSSR*CREAPTVHRDSAAC Trigger: ACAAGCTGCTGAGTCCCGATGGACAGTCGGAGCCTCCCTACACAACCTGGAAGATCCGGACCTCAGGCGAGTGTCGCCACACGCTGGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS CAA 72 bp | TGTGGCGACACTCGCCTGAGGTCCGGATCTTCCAGGTaGTGTAGGGAGGCTCCGACTGTCCATCGGGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: CGDTRLRSGSSR*CREAPTVHRDS Trigger: TGAGTCCCGATGGACAGTCGGAGCCTCCCTACACAACCTGGAAGATCCGGACCTCAGGCGAGTGTCGCCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS TCA 72 bp | CTTCTCCGAGAGCTTGGGCGAGGATGTTCCACTGCATaGCGCGAATGGGAGAGTGGCTGCTGGAGCAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLRELGRGCSTA*REWESGCWSNL Trigger: CAGATTGCTCCAGCAGCCACTCTCCCATTCGCGTCATGCAGTGGAACATCCTCGCCCAAGCTCTCGGAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 ENSMUST00000193018.2 |
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| CDS TCA 72 bp | GTACCAGATATAGTCCAGCGTGTGGCGACACTCGCCTaGGGTCCGGATCTTCCAGGTTGTGTAGGGAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VPDIVQRVATLA*GPDLPGCVGRL Trigger: GAGCCTCCCTACACAACCTGGAAGATCCGGACCTCAGGCGAGTGTCGCCACACGCTGGACTATATCTGGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS GCA 72 bp | TTGCCTTCTCCGAGAGCTTGGGCGAGGATGTTCCACTaGATGACGCGAATGGGAGAGTGGCTGCTGGAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LPSPRAWARMFH*MTRMGEWLLEQ Trigger: TTGCTCCAGCAGCCACTCTCCCATTCGCGTCATGCAGTGGAACATCCTCGCCCAAGCTCTCGGAGAAGGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 ENSMUST00000193018.2 |
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| CDS CAA 72 bp | TCCCATTTGAGCGCTTCCACGGGGCACTGCACAAAGTaGTCTTTGCCTTCTCCGAGAGCTTGGGCGAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: SHLSASTGHCTK*SLPSPRAWARM Trigger: CATCCTCGCCCAAGCTCTCGGAGAAGGCAAAGACAACTTTGTGCAGTGCCCCGTGGAAGCGCTCAAATGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 ENSMUST00000193018.2 |
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| CDS CAA 90 bp | TTCCTCTCTTCCCATTTGAGCGCTTCCACGGGGCACTGCACAAAGTaGTCTTTGCCTTCTCCGAGAGCTTGGGCGAGGATGTTCCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: FLSSHLSASTGHCTK*SLPSPRAWARMFHC Trigger: GCAGTGGAACATCCTCGCCCAAGCTCTCGGAGAAGGCAAAGACAACTTTGTGCAGTGCCCCGTGGAAGCGCTCAAATGGGAAGAGAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 ENSMUST00000193018.2 |
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| CDS TCA 72 bp | GCTTGGGGAAAAACGTGCCTTGGTAGCCCAGTCTACTaGGGAGTGGCTGGAAGGTGTCAAAGTAGTGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: AWGKTCLGSPVY*GVAGRCQSSGP Trigger: TGGACCACTACTTTGACACCTTCCAGCCACTCCTCAGTAGACTGGGCTACCAAGGCACGTTTTTCCCCAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS TCA 72 bp | CAAAGTGTTTGTAGACCTCTTCGGTTGGCTCTGCGTTaGAGTCCCCGCAGACGATCAGGGGGATCTTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: QSVCRPLRLALR*SPRRRSGGSLL Trigger: GAGCAAAGATCCCCCTGATCGTCTGCGGGGACTTCAACGCAGAGCCAACCGAAGAGGTCTACAAACACTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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| CDS CCA 72 bp | AAAGTAGTGGTCCACTTCCTGGAGGCACAGTATGTCTaGCTGGTAAGCCAGGATCTCCTCCAGGATCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: KVVVHFLEAQYV*LVSQDLLQDQA Trigger: TGCCTGATCCTGGAGGAGATCCTGGCTTACCAGCCAGACATACTGTGCCTCCAGGAAGTGGACCACTACTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
||
| CDS CCA 72 bp | GAAAAACGTGCCTTGGTAGCCCAGTCTACTGAGGAGTaGCTGGAAGGTGTCAAAGTAGTGGTCCACTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: EKRALVAQSTEE*LEGVKVVVHFL Trigger: CAGGAAGTGGACCACTACTTTGACACCTTCCAGCCACTCCTCAGTAGACTGGGCTACCAAGGCACGTTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023849.15 ENSMUST00000144826.2 ENSMUST00000167780.2 |
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