Pregenerated sensors for NOC4L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033294Ensembl transcript IDs: ENSMUST00000042147.6
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAATCCAAAACAAACCCTTTATTTGGTTGCTCTTCCAGAGTATCTaGGTTCAGTTCACACCACCAACACGGTGGCTCACAAGTGTCTGT | + |
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Preference number: 1 (lower is better) Translates to: QIQNKPFIWLLFQSI*VQFTPPTRWLTSVC Trigger: ACAGACACTTGTGAGCCACCGTGTTGGTGGTGTGAACTGAACCCAGATACTCTGGAAGAGCAACCAAATAAAGGGTTTGTTTTGGATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| 3UTR CCA 90 bp | ACAAGTGTCTGTAATTCTCGTTATAGGGGATCTGACACCCTCACCTaGCCTACATGTGATAAACAGACATCCATGCAATCAAAACACCCA | + |
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Preference number: 1 (lower is better) Translates to: TSVCNSRYRGSDTLT*PTCDKQTSMQSKHP Trigger: TGGGTGTTTTGATTGCATGGATGTCTGTTTATCACATGTAGGCCAGGTGAGGGTGTCAGATCCCCTATAACGAGAATTACAGACACTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| 3UTR-3UTR CCA 90 bp | GTCTACAGAGGTCCAGGACAGCCAGGGCTACATAGAGAAGCATTGGGAAAAACAACACCACCAACACGGTaGCTCACAAGTGTCTGTAAT | + |
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Preference number: 2 (lower is better) Translates to: VYRGPGQPGLHREALGKTTPPTR*LTSVCN Trigger: ATTACAGACACTTGTGAGCCACCGTGTTGGTGGTGT...TGTTTTTCCCAATGCTTCTCTATGTAGCCCTGGCTGTCCTGGACCTCTGTAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| 3UTR TCA 72 bp | ATCCCAGCACTCAAGAAGCAGAGGCAGTCAGATATCTaGTTGGGTTCAAGGCTAGCCTGGTCTACAGAGGTC | + |
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Preference number: 3 (lower is better) Translates to: IPALKKQRQSDI*LGSRLAWSTEV Trigger: GACCTCTGTAGACCAGGCTAGCCTTGAACCCAATCAGATATCTGACTGCCTCTGCTTCTTGAGTGCTGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| 3UTR GCA 72 bp | CCCTCACCTGGCCTACATGTGATAAACAGACATCCATaGAATCAAAACACCCATACAGTACTGGGGAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: PSPGLHVINRHP*NQNTHTVLGRL Trigger: AAGCCTCCCCAGTACTGTATGGGTGTTTTGATTGCATGGATGTCTGTTTATCACATGTAGGCCAGGTGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| 3UTR-3UTR CAA 90 bp | GTCTACAGAGGTCCAGGACAGCCAGGGCTACATAGAGAAGCATTGGGAAAAACAAAACCCTTTATTTGGTaGCTCTTCCAGAGTATCTGG | + |
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Preference number: 3 (lower is better) Translates to: VYRGPGQPGLHREALGKTKPFIW*LFQSIW Trigger: CCAGATACTCTGGAAGAGCAACCAAATAAAGGGTTT...TGTTTTTCCCAATGCTTCTCTATGTAGCCCTGGCTGTCCTGGACCTCTGTAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| 3UTR CCA 72 bp | AACAAACCCTTTATTTGGTTGCTCTTCCAGAGTATCTaGGTTCAGTTCACACCACCAACACGGTGGCTCACA | + |
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Preference number: 3 (lower is better) Translates to: NKPFIWLLFQSI*VQFTPPTRWLT Trigger: TGTGAGCCACCGTGTTGGTGGTGTGAACTGAACCCAGATACTCTGGAAGAGCAACCAAATAAAGGGTTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| 3UTR CCA 72 bp | GAGGTCCAGGACAGCCAGGGCTACATAGAGAAGCATTaGGAAAAACAAACAAAACCCAAACCAAACCACACT | + |
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Preference number: 3 (lower is better) Translates to: EVQDSQGYIEKH*EKQTKPKPNHT Trigger: AGTGTGGTTTGGTTTGGGTTTTGTTTGTTTTTCCCAATGCTTCTCTATGTAGCCCTGGCTGTCCTGGACCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| 3UTR CCA 72 bp | TGTAATTCTCGTTATAGGGGATCTGACACCCTCACCTaGCCTACATGTGATAAACAGACATCCATGCAATCA | + |
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Preference number: 3 (lower is better) Translates to: CNSRYRGSDTLT*PTCDKQTSMQS Trigger: TGATTGCATGGATGTCTGTTTATCACATGTAGGCCAGGTGAGGGTGTCAGATCCCCTATAACGAGAATTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR CCA 90 bp | CCCAGCACTCAAGAAGCAGAGGCAGTCAGATATCTGATTGGGTTCAAGGCTAGCGTGGGTTGGGCCAGGTaGGGCAGGATGGAGTCATGC | + |
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Preference number: 4 (lower is better) Translates to: PSTQEAEAVRYLIGFKASVGWAR*GRMESC Trigger: GCATGACTCCATCCTGCCCCACCTGGCCCAACCCAC...GCTAGCCTTGAACCCAATCAGATATCTGACTGCCTCTGCTTCTTGAGTGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR GCA 90 bp | CCCAGCACTCAAGAAGCAGAGGCAGTCAGATATCTGATTGGGTTCAAGGCTAGCCTGAGGGGCAGCTTGTaGTTGAGGAAGCCAAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: PSTQEAEAVRYLIGFKASLRGSL*LRKPSH Trigger: GTGGCTTGGCTTCCTCAAGCACAAGCTGCCCCTCAG...GCTAGCCTTGAACCCAATCAGATATCTGACTGCCTCTGCTTCTTGAGTGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR GCA 90 bp | CTACATGTGATAAACAGACATCCATGCAATCAAAACACCCATACAGTACTGGGGGGCTCCCTGGGACCCTaGCAGGGCCGTGTCTTCGCT | + |
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Preference number: 4 (lower is better) Translates to: LHVINRHPCNQNTHTVLGGSLGP*QGRVFA Trigger: AGCGAAGACACGGCCCTGGCAGGGTCCCAGGGAGCC...CCCCAGTACTGTATGGGTGTTTTGATTGCATGGATGTCTGTTTATCACATGTAG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR CCA 90 bp | GAGGTCCAGGACAGCCAGGGCTACATAGAGAAGCATTGGGAAAAACAAACAAAATTGTATGTGGCTCCCTaGGACCCTGCCAGGGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: EVQDSQGYIEKHWEKQTKLYVAP*DPARAV Trigger: CACGGCCCTGGCAGGGTCCCAGGGAGCCACATACAA...TTTTGTTTGTTTTTCCCAATGCTTCTCTATGTAGCCCTGGCTGTCCTGGACCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR TCA 90 bp | AGAGGTCCAGGACAGCCAGGGCTACATAGAGAAGCATTGGGAAAAACAAACAAACTCCTACCACTGCCCTaGAGAGTGTGCGGGGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: RGPGQPGLHREALGKTNKLLPLP*RVCGGR Trigger: TCTTCCCCCGCACACTCTTCAGGGCAGTGGTAGGAG...TTTGTTTGTTTTTCCCAATGCTTCTCTATGTAGCCCTGGCTGTCCTGGACCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR TCA 90 bp | ACTCAAGAAGCAGAGGCAGTCAGATATCTGATTGGGTTCAAGGCTAGCCTGGTCCATTGTTCCAGAGGGTaGGGGACACCTCAGGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: TQEAEAVRYLIGFKASLVHCSRG*GTPQVA Trigger: AGCAACCTGAGGTGTCCCTCACCCTCTGGAACAATG...GACCAGGCTAGCCTTGAACCCAATCAGATATCTGACTGCCTCTGCTTCTTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR CCA 90 bp | CCCAGCACTCAAGAAGCAGAGGCAGTCAGATATCTGATTGGGTTCAAGGCTAGCCCTTGTATTTGTATGTaGCTCCCTGGGACCCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: PSTQEAEAVRYLIGFKASPCICM*LPGTLP Trigger: TGGCAGGGTCCCAGGGAGCCACATACAAATACAAGG...GCTAGCCTTGAACCCAATCAGATATCTGACTGCCTCTGCTTCTTGAGTGCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR TCA 90 bp | TCTGACACCCTCACCTGGCCTACATGTGATAAACAGACATCCATGCAATCAAAATCGGGCTCCTCGGACTaGAGCACAGCCAAGATGTCG | + |
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Preference number: 4 (lower is better) Translates to: SDTLTWPTCDKQTSMQSKSGSSD*STAKMS Trigger: CGACATCTTGGCTGTGCTTCAGTCCGAGGAGCCCGA...TTTTGATTGCATGGATGTCTGTTTATCACATGTAGGCCAGGTGAGGGTGTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR CCA 90 bp | CAAGAAGCAGAGGCAGTCAGATATCTGATTGGGTTCAAGGCTAGCCTGGTCTACGTGAGTTCACACTCTTaGAGGGGTAGGCTCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: QEAEAVRYLIGFKASLVYVSSHS*RGRLTA Trigger: TGCTGTGAGCCTACCCCTCCAAGAGTGTGAACTCAC...GTAGACCAGGCTAGCCTTGAACCCAATCAGATATCTGACTGCCTCTGCTTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR GCA 90 bp | AAAAACCAAATCCAAAACAAACCCTTTATTTGGTTGCTCTTCCAGAGTATCTGGAGGGACACCTCAGGTTaGTGGCTGGTGGCCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: KNQIQNKPFIWLLFQSIWRDTSG*WLVARA Trigger: GGCCCGGGCCACCAGCCAGCAACCTGAGGTGTCCCT...CCAGATACTCTGGAAGAGCAACCAAATAAAGGGTTTGTTTTGGATTTGGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR GCA 90 bp | CATGTGATAAACAGACATCCATGCAATCAAAACACCCATACAGTACTGGGGAGGGGCAGGATGGAGTCATaGATGGCCACCAGCACCTTC | + |
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Preference number: 4 (lower is better) Translates to: HVINRHPCNQNTHTVLGRGRMES*MATSTF Trigger: GAAGGTGCTGGTGGCCATGCATGACTCCATCCTGCC...CCTCCCCAGTACTGTATGGGTGTTTTGATTGCATGGATGTCTGTTTATCACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR CCA 90 bp | GTCTACAGAGGTCCAGGACAGCCAGGGCTACATAGAGAAGCATTGGGAAAAACACCAAGCCACATCTCCTaGAAAGCTTTCTTGTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VYRGPGQPGLHREALGKTPSHIS*KAFLCS Trigger: GGAGCACAAGAAAGCTTTCCAGGAGATGTGGCTTGG...TGTTTTTCCCAATGCTTCTCTATGTAGCCCTGGCTGTCCTGGACCTCTGTAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR CCA 90 bp | GGCCTACATGTGATAAACAGACATCCATGCAATCAAAACACCCATACAGTACTGCCAGGTGGGGCAGGATaGAGTCATGCATGGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: GLHVINRHPCNQNTHTVLPGGAG*SHAWPP Trigger: TGGTGGCCATGCATGACTCCATCCTGCCCCACCTGG...CAGTACTGTATGGGTGTTTTGATTGCATGGATGTCTGTTTATCACATGTAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR CCA 90 bp | TCTGACACCCTCACCTGGCCTACATGTGATAAACAGACATCCATGCAATCAAAAATCATGAGTGTGGGTTaGGCCAGGTGGGGCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: SDTLTWPTCDKQTSMQSKIMSVG*ARWGRM Trigger: CATCCTGCCCCACCTGGCCCAACCCACACTCATGAT...TTTTGATTGCATGGATGTCTGTTTATCACATGTAGGCCAGGTGAGGGTGTCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR TCA 90 bp | AGAGGTCCAGGACAGCCAGGGCTACATAGAGAAGCATTGGGAAAAACAAACAAACAGCAGACAGCAATGTaGAGGCATTGTTCCAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: RGPGQPGLHREALGKTNKQQTAM*RHCSRG Trigger: CCCTCTGGAACAATGCCTTCACATTGCTGTCTGCTG...TTTGTTTGTTTTTCCCAATGCTTCTCTATGTAGCCCTGGCTGTCCTGGACCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR TCA 90 bp | GGCCTACATGTGATAAACAGACATCCATGCAATCAAAACACCCATACAGTACTGGGGGCAGCTTGTGCTTaGGGAAGCCAAGCCACATCT | + |
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Preference number: 4 (lower is better) Translates to: GLHVINRHPCNQNTHTVLGAACA*GSQATS Trigger: AGATGTGGCTTGGCTTCCTCAAGCACAAGCTGCCCC...CAGTACTGTATGGGTGTTTTGATTGCATGGATGTCTGTTTATCACATGTAGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR TCA 90 bp | GGTCCAGGACAGCCAGGGCTACATAGAGAAGCATTGGGAAAAACAAACAAAACCGCTCGGTACTTGACATaGAAGATGGATGGATCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GPGQPGLHREALGKTNKTARYLT*KMDGSR Trigger: CCTGGATCCATCCATCTTTCATGTCAAGTACCGAGC...GGTTTTGTTTGTTTTTCCCAATGCTTCTCTATGTAGCCCTGGCTGTCCTGGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR TCA 90 bp | ACTCAAGAAGCAGAGGCAGTCAGATATCTGATTGGGTTCAAGGCTAGCCTGGTCAACGGGCTCGGTACTTaGCATGAAAGATGGATGGAT | + |
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Preference number: 4 (lower is better) Translates to: TQEAEAVRYLIGFKASLVNGLGT*HERWMD Trigger: ATCCATCCATCTTTCATGTCAAGTACCGAGCCCGTT...GACCAGGCTAGCCTTGAACCCAATCAGATATCTGACTGCCTCTGCTTCTTGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR GCA 90 bp | AGAGGTCCAGGACAGCCAGGGCTACATAGAGAAGCATTGGGAAAAACAAACAAAATGCTAGTGGCCACCTaGATTGTGTGGTACCGGATG | + |
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Preference number: 4 (lower is better) Translates to: RGPGQPGLHREALGKTNKMLVAT*IVWYRM Trigger: CATCCGGTACCACACAATGCAGGTGGCCACTAGCAT...TTTGTTTGTTTTTCCCAATGCTTCTCTATGTAGCCCTGGCTGTCCTGGACCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR CCA 90 bp | GTGCACACCTTTAATCCCAGCACTCAAGAAGCAGAGGCAGTCAGATATCTGATTAAGAGGTCAGCCAAGTaGAAGAAACGGGCTCGGTAC | + |
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Preference number: 4 (lower is better) Translates to: VHTFNPSTQEAEAVRYLIKRSAK*KKRARY Trigger: GTACCGAGCCCGTTTCTTCCACTTGGCTGACCTCTT...AATCAGATATCTGACTGCCTCTGCTTCTTGAGTGCTGGGATTAAAGGTGTGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR CCA 90 bp | CATGTGATAAACAGACATCCATGCAATCAAAACACCCATACAGTACTGGGGAGGAGTAAGTTCCAGGAGTaGCGCGATGCTGACCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: HVINRHPCNQNTHTVLGRSKFQE*RDADLR Trigger: CCTGAGGTCAGCATCGCGCCACTCCTGGAACTTACT...CCTCCCCAGTACTGTATGGGTGTTTTGATTGCATGGATGTCTGTTTATCACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR GCA 90 bp | AAAAACCAAATCCAAAACAAACCCTTTATTTGGTTGCTCTTCCAGAGTATCTGGCAGGCCTCCTACCACTaGCCTGAAGAGTGTGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: KNQIQNKPFIWLLFQSIWQASYH*PEECAG Trigger: CCCCGCACACTCTTCAGGGCAGTGGTAGGAGGCCTG...CCAGATACTCTGGAAGAGCAACCAAATAAAGGGTTTGTTTTGGATTTGGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR GCA 90 bp | TGGCCTACATGTGATAAACAGACATCCATGCAATCAAAACACCCATACAGTACTTGCTGCTGGAGGGTCTaGAGTTCCCACAAGCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: WPTCDKQTSMQSKHPYSTCCWRV*SSHKQL Trigger: GAGCTGCTTGTGGGAACTGCAGACCCTCCAGCAGCA...AGTACTGTATGGGTGTTTTGATTGCATGGATGTCTGTTTATCACATGTAGGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR TCA 90 bp | AGAGGTCCAGGACAGCCAGGGCTACATAGAGAAGCATTGGGAAAAACAAACAAATCACATAGAAGTTGGTaGGTTCACACTCTTGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: RGPGQPGLHREALGKTNKSHRSW*VHTLGG Trigger: CCCTCCAAGAGTGTGAACTCACCAACTTCTATGTGA...TTTGTTTGTTTTTCCCAATGCTTCTCTATGTAGCCCTGGCTGTCCTGGACCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR GCA 90 bp | GTGCACACCTTTAATCCCAGCACTCAAGAAGCAGAGGCAGTCAGATATCTGATTGTCTACGCAGCAAGTTaGAGATTAAAGGCAGGACCA | + |
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Preference number: 4 (lower is better) Translates to: VHTFNPSTQEAEAVRYLIVYAAS*RLKAGP Trigger: TGGTCCTGCCTTTAATCTGCAACTTGCTGCGTAGAC...AATCAGATATCTGACTGCCTCTGCTTCTTGAGTGCTGGGATTAAAGGTGTGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR CCA 90 bp | AAAAACCAAATCCAAAACAAACCCTTTATTTGGTTGCTCTTCCAGAGTATCTGGGCCAGTTCCTTGACCTaGAAGGTGGGATGGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: KNQIQNKPFIWLLFQSIWASSLT*KVGWAR Trigger: CCTGGCCCATCCCACCTTCCAGGTCAAGGAACTGGC...CCAGATACTCTGGAAGAGCAACCAAATAAAGGGTTTGTTTTGGATTTGGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR CCA 90 bp | GTGCACACCTTTAATCCCAGCACTCAAGAAGCAGAGGCAGTCAGATATCTGATTGCCACCTGCATTGTGTaGTACCGGATGTCATCATAT | + |
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Preference number: 4 (lower is better) Translates to: VHTFNPSTQEAEAVRYLIATCIV*YRMSSY Trigger: ATATGATGACATCCGGTACCACACAATGCAGGTGGC...AATCAGATATCTGACTGCCTCTGCTTCTTGAGTGCTGGGATTAAAGGTGTGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| 3UTR CAA 72 bp | AGAGGTCCAGGACAGCCAGGGCTACATAGAGAAGCATaGGGAAAAACAAACAAAACCCAAACCAAACCACAC | + |
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Preference number: 4 (lower is better) Translates to: RGPGQPGLHREA*GKTNKTQTKPH Trigger: GTGTGGTTTGGTTTGGGTTTTGTTTGTTTTTCCCAATGCTTCTCTATGTAGCCCTGGCTGTCCTGGACCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR GCA 90 bp | GTGCACACCTTTAATCCCAGCACTCAAGAAGCAGAGGCAGTCAGATATCTGATTTTTGCTCCTTCCAGCTaGACAAACTTCATGAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: VHTFNPSTQEAEAVRYLIFAPSS*TNFMSV Trigger: GACACTCATGAAGTTTGTGCAGCTGGAAGGAGCAAA...AATCAGATATCTGACTGCCTCTGCTTCTTGAGTGCTGGGATTAAAGGTGTGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR CCA 90 bp | GGCCTACATGTGATAAACAGACATCCATGCAATCAAAACACCCATACAGTACTGCTGAGACAGAAGAACTaGGTACAGAGGTCGTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: GLHVINRHPCNQNTHTVLLRQKN*VQRSSC Trigger: ACAGGACGACCTCTGTACCCAGTTCTTCTGTCTCAG...CAGTACTGTATGGGTGTTTTGATTGCATGGATGTCTGTTTATCACATGTAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR TCA 90 bp | TGGCCTACATGTGATAAACAGACATCCATGCAATCAAAACACCCATACAGTACTGACCTTCCACTTGTCTaGTGTCTGTGCATGCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: WPTCDKQTSMQSKHPYSTDLPLV*CLCMLH Trigger: GTGAAGCATGCACAGACATCAGACAAGTGGAAGGTC...AGTACTGTATGGGTGTTTTGATTGCATGGATGTCTGTTTATCACATGTAGGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR CCA 90 bp | CTACATGTGATAAACAGACATCCATGCAATCAAAACACCCATACAGTACTGGGGTCCAGGTTGTGTTTATaGATTAGGATGAAAAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: LHVINRHPCNQNTHTVLGSRLCL*IRMKSP Trigger: CGGGCTTTTCATCCTAATCCATAAACACAACCTGGA...CCCCAGTACTGTATGGGTGTTTTGATTGCATGGATGTCTGTTTATCACATGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR CCA 90 bp | TGGCCTACATGTGATAAACAGACATCCATGCAATCAAAACACCCATACAGTACTGACATGAAAGATGGATaGATCCAGGAGACCATAGAG | + |
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Preference number: 4 (lower is better) Translates to: WPTCDKQTSMQSKHPYSTDMKDG*IQETIE Trigger: CTCTATGGTCTCCTGGATCCATCCATCTTTCATGTC...AGTACTGTATGGGTGTTTTGATTGCATGGATGTCTGTTTATCACATGTAGGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR GCA 90 bp | AAAAACCAAATCCAAAACAAACCCTTTATTTGGTTGCTCTTCCAGAGTATCTGGCTTCTCCAGTGGTTTTaGTCCTTCCAGCTGCACAAA | + |
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Preference number: 4 (lower is better) Translates to: KNQIQNKPFIWLLFQSIWLLQWF*SFQLHK Trigger: TTTGTGCAGCTGGAAGGAGCAAAACCACTGGAGAAG...CCAGATACTCTGGAAGAGCAACCAAATAAAGGGTTTGTTTTGGATTTGGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR GCA 90 bp | AAAAACCAAATCCAAAACAAACCCTTTATTTGGTTGCTCTTCCAGAGTATCTGGCTCAAAGATCTCATATaGAGTAAGTTCCAGGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: KNQIQNKPFIWLLFQSIWLKDLI*SKFQEW Trigger: CCACTCCTGGAACTTACTGCATATGAGATCTTTGAG...CCAGATACTCTGGAAGAGCAACCAAATAAAGGGTTTGTTTTGGATTTGGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR GCA 90 bp | AAAAACCAAATCCAAAACAAACCCTTTATTTGGTTGCTCTTCCAGAGTATCTGGTTCTTCTTCAGGTCCTaGTCAAAGATCTCATATGCA | + |
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Preference number: 4 (lower is better) Translates to: KNQIQNKPFIWLLFQSIWFFFRS*SKISYA Trigger: TGCATATGAGATCTTTGAGCAGGACCTGAAGAAGAA...CCAGATACTCTGGAAGAGCAACCAAATAAAGGGTTTGTTTTGGATTTGGTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS GCA 90 bp | CAAGATGTCGAACACCGCGTTCGCTTGGCCACGACTCGTCAGCACTaGCTCCAGGAGGCGGCCGAGCTCTTGCCTGGAGCTCGCCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: QDVEHRVRLATTRQH*LQEAAELLPGARRS Trigger: GCTTCGGCGAGCTCCAGGCAAGAGCTCGGCCGCCTCCTGGAGGCAGTGCTGACGAGTCGTGGCCAAGCGAACGCGGTGTTCGACATCTTG 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CCA 90 bp | GTAGGGCCTCAGGAGGTGCTGTTAGCGCCAGCCGAGCCAGGCGTTTaGCAAAGGCAGCCACCAGGTAGGCAGGGAGGTGGGAGGATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: VGPQEVLLAPAEPGV*QRQPPGRQGGGRMK Trigger: TTTCATCCTCCCACCTCCCTGCCTACCTGGTGGCTGCCTTTGCCAAACGCCTGGCTCGGCTGGCGCTAACAGCACCTCCTGAGGCCCTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS GCA 90 bp | CCACGAACAGCTCTTCCCGCTCCAGCAAGGTACCGAAGAGTCGGCTaGACGTGCGCACTCCTTCCTCGATTTCCTCGGGCTCCTCGGACT | + |
|
Preference number: 5 (lower is better) Translates to: PRTALPAPARYRRVG*TCALLPRFPRAPRT Trigger: AGTCCGAGGAGCCCGAGGAAATCGAGGAAGGAGTGCGCACGTGCAGCCGACTCTTCGGTACCTTGCTGGAGCGGGAAGAGCTGTTCGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS GCA 90 bp | ACAGCTCTTCCCGCTCCAGCAAGGTACCGAAGAGTCGGCTGCACGTaGGCACTCCTTCCTCGATTTCCTCGGGCTCCTCGGACTGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TALPAPARYRRVGCT*ALLPRFPRAPRTEA Trigger: TGCTTCAGTCCGAGGAGCCCGAGGAAATCGAGGAAGGAGTGCGCACGTGCAGCCGACTCTTCGGTACCTTGCTGGAGCGGGAAGAGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS GCA 90 bp | AGCAATGTGAAGGCATTGTTCCAGAGGGTGAGGGACACCTCAGGTTaGTGGCTGGTGGCCCGGGCCATGATGCTAGTGGCCACCTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: SNVKALFQRVRDTSG*WLVARAMMLVATCI Trigger: AATGCAGGTGGCCACTAGCATCATGGCCCGGGCCACCAGCCAGCAACCTGAGGTGTCCCTCACCCTCTGGAACAATGCCTTCACATTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS GCA 90 bp | GTTGGGTCATATGGATCAGCATCTAGCTCAGGGCCCTGTGGGCGGTaGACCATAACTCGGCAGGCAGGGTGTCTACGCAGCAAGTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VGSYGSASSSGPCGR*TITRQAGCLRSKLQ Trigger: CTGCAACTTGCTGCGTAGACACCCTGCCTGCCGAGTTATGGTGCACCGCCCACAGGGCCCTGAGCTAGATGCTGATCCATATGACCCAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CCA 90 bp | TGGTATCGATGTCTTATCCACACCTTGTATTTGTATGTGGCTCCCTaGGACCCTGCCAGGGCCGTGTCTTCGCTCGGCAGCGAGCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: WYRCLIHTLYLYVAP*DPARAVSSLGSEPT Trigger: CGTGGGCTCGCTGCCGAGCGAAGACACGGCCCTGGCAGGGTCCCAGGGAGCCACATACAAATACAAGGTGTGGATAAGACATCGATACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CCA 90 bp | AATGTGAAGGCATTGTTCCAGAGGGTGAGGGACACCTCAGGTTGCTaGCTGGTGGCCCGGGCCATGATGCTAGTGGCCACCTGCATTGTG | + |
|
Preference number: 5 (lower is better) Translates to: NVKALFQRVRDTSGC*LVARAMMLVATCIV Trigger: CACAATGCAGGTGGCCACTAGCATCATGGCCCGGGCCACCAGCCAGCAACCTGAGGTGTCCCTCACCCTCTGGAACAATGCCTTCACATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CCA 90 bp | CCCACATCACAGGCACTTGTGAGGAAGTCAATCATGAGTGTGGGTTaGGCCAGGTGGGGCAGGATGGAGTCATGCATGGCCACCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: PTSQALVRKSIMSVG*ARWGRMESCMATST Trigger: GGTGCTGGTGGCCATGCATGACTCCATCCTGCCCCACCTGGCCCAACCCACACTCATGATTGACTTCCTCACAAGTGCCTGTGATGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CCA 90 bp | GGAGGGTCTGCAGTTCCCACAAGCAGCTCTCCAGGGCACGGCTTCTaGCTGGGTCCTTCTCCGTTGGGTCATATGGATCAGCATCTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GGSAVPTSSSPGHGF*LGPSPLGHMDQHLA Trigger: AGCTAGATGCTGATCCATATGACCCAACGGAGAAGGACCCAGCCAGAAGCCGTGCCCTGGAGAGCTGCTTGTGGGAACTGCAGACCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CCA 90 bp | AGCAGCTGTGGTATCGATGTCTTATCCACACCTTGTATTTGTATGTaGCTCCCTGGGACCCTGCCAGGGCCGTGTCTTCGCTCGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SSCGIDVLSTPCICM*LPGTLPGPCLRSAA Trigger: CGCTGCCGAGCGAAGACACGGCCCTGGCAGGGTCCCAGGGAGCCACATACAAATACAAGGTGTGGATAAGACATCGATACCACAGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CCA 90 bp | CAAGTACTCACAGAAATGGGAGATAAGCAGGCTGTGGTCGTCCTCTaGTGTGAGCAGGCCTCCTACCACTGCCCTGAAGAGTGTGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QVLTEMGDKQAVVVL*CEQASYHCPEECAG Trigger: CCCCGCACACTCTTCAGGGCAGTGGTAGGAGGCCTGCTCACACCAGAGGACGACCACAGCCTGCTTATCTCCCATTTCTGTGAGTACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CCA 90 bp | TTCATGAGTGTCTTGAGGGCCAGTTCCTTGACCTGGAAGGTGGGATaGGCCAGGAGTTCCTCTAGGCGGTTACAGCAGCTGTGGTATCGA | + |
|
Preference number: 5 (lower is better) Translates to: FMSVLRASSLTWKVG*ARSSSRRLQQLWYR Trigger: TCGATACCACAGCTGCTGTAACCGCCTAGAGGAACTCCTGGCCCATCCCACCTTCCAGGTCAAGGAACTGGCCCTCAAGACACTCATGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CCA 90 bp | AGCTGCACAAACTTCATGAGTGTCTTGAGGGCCAGTTCCTTGACCTaGAAGGTGGGATGGGCCAGGAGTTCCTCTAGGCGGTTACAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SCTNFMSVLRASSLT*KVGWARSSSRRLQQ Trigger: CTGCTGTAACCGCCTAGAGGAACTCCTGGCCCATCCCACCTTCCAGGTCAAGGAACTGGCCCTCAAGACACTCATGAAGTTTGTGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS GCA 90 bp | GGGGAAGAGGTAGTGGCTTTCCCACTGAGGCTTCTCCAGTGGTTTTaGTCCTTCCAGCTGCACAAACTTCATGAGTGTCTTGAGGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GEEVVAFPLRLLQWF*SFQLHKLHECLEGQ Trigger: CTGGCCCTCAAGACACTCATGAAGTTTGTGCAGCTGGAAGGAGCAAAACCACTGGAGAAGCCTCAGTGGGAAAGCCACTACCTCTTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
||
| CDS CCA 90 bp | CTTCAGGTCCTGCTCAAAGATCTCATATGCAGTAAGTTCCAGGAGTaGCGCGATGCTGACCTCAGGGACAGACAGCACCTGGTTGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: LQVLLKDLICSKFQE*RDADLRDRQHLVDD Trigger: GTCATCAACCAGGTGCTGTCTGTCCCTGAGGTCAGCATCGCGCCACTCCTGGAACTTACTGCATATGAGATCTTTGAGCAGGACCTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CCA 90 bp | AAGGTGGGATGGGCCAGGAGTTCCTCTAGGCGGTTACAGCAGCTGTaGTATCGATGTCTTATCCACACCTTGTATTTGTATGTGGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KVGWARSSSRRLQQL*YRCLIHTLYLYVAP Trigger: GGGAGCCACATACAAATACAAGGTGTGGATAAGACATCGATACCACAGCTGCTGTAACCGCCTAGAGGAACTCCTGGCCCATCCCACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CCA 90 bp | TCATCATATTCCAAGTACTCACAGAAATGGGAGATAAGCAGGCTGTaGTCGTCCTCTGGTGTGAGCAGGCCTCCTACCACTGCCCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSYSKYSQKWEISRL*SSSGVSRPPTTALK Trigger: CTTCAGGGCAGTGGTAGGAGGCCTGCTCACACCAGAGGACGACCACAGCCTGCTTATCTCCCATTTCTGTGAGTACTTGGAATATGATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS TCA 90 bp | CCTTCCACTTGTCTGATGTCTGTGCATGCTTCACATAGAAGTTGGTaGGTTCACACTCTTGGAGGGGTAGGCTCACAGCAGACAGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: PSTCLMSVHASHRSW*VHTLGGVGSQQTAM Trigger: CATTGCTGTCTGCTGTGAGCCTACCCCTCCAAGAGTGTGAACTCACCAACTTCTATGTGAAGCATGCACAGACATCAGACAAGTGGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CCA 90 bp | AGCCAAGTGGAAGAAACGGGCTCGGTACTTGACATGAAAGATGGATaGATCCAGGAGACCATAGAGCTTCTGGTAGAAGTCAGGGTACTC | + |
|
Preference number: 5 (lower is better) Translates to: SQVEETGSVLDMKDG*IQETIELLVEVRVL Trigger: GAGTACCCTGACTTCTACCAGAAGCTCTATGGTCTCCTGGATCCATCCATCTTTCATGTCAAGTACCGAGCCCGTTTCTTCCACTTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR CAA 90 bp | CAAGAAGCAGAGGCAGTCAGATATCTGATTGGGTTCAAGGCTAGCCTGGTCTACATCCACACCTTGTATTaGTATGTGGCTCCCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: QEAEAVRYLIGFKASLVYIHTLY*YVAPWD Trigger: GTCCCAGGGAGCCACATACAAATACAAGGTGTGGAT...GTAGACCAGGCTAGCCTTGAACCCAATCAGATATCTGACTGCCTCTGCTTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR CAA 90 bp | TCTGACACCCTCACCTGGCCTACATGTGATAAACAGACATCCATGCAATCAAAATTGAGGGCCAGTTCCTaGACCTGGAAGGTGGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: SDTLTWPTCDKQTSMQSKLRASS*TWKVGW Trigger: CCATCCCACCTTCCAGGTCAAGGAACTGGCCCTCAA...TTTTGATTGCATGGATGTCTGTTTATCACATGTAGGCCAGGTGAGGGTGTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR CAA 90 bp | GAGGTCCAGGACAGCCAGGGCTACATAGAGAAGCATTGGGAAAAACAAACAAAAAGCAATGTGAAGGCATaGTTCCAGAGGGTGAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: EVQDSQGYIEKHWEKQTKSNVKA*FQRVRD Trigger: GTCCCTCACCCTCTGGAACAATGCCTTCACATTGCT...TTTTGTTTGTTTTTCCCAATGCTTCTCTATGTAGCCCTGGCTGTCCTGGACCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR CAA 90 bp | TCTGACACCCTCACCTGGCCTACATGTGATAAACAGACATCCATGCAATCAAAAGCTTCTCCAGTGGTTTaGCTCCTTCCAGCTGCACAA | + |
|
Preference number: 5 (lower is better) Translates to: SDTLTWPTCDKQTSMQSKASPVV*LLPAAQ Trigger: TTGTGCAGCTGGAAGGAGCAAAACCACTGGAGAAGC...TTTTGATTGCATGGATGTCTGTTTATCACATGTAGGCCAGGTGAGGGTGTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR CAA 90 bp | TGGCCTACATGTGATAAACAGACATCCATGCAATCAAAACACCCATACAGTACTAGGGGCAGCTTGTGCTaGAGGAAGCCAAGCCACATC | + |
|
Preference number: 5 (lower is better) Translates to: WPTCDKQTSMQSKHPYSTRGSLC*RKPSHI Trigger: GATGTGGCTTGGCTTCCTCAAGCACAAGCTGCCCCT...AGTACTGTATGGGTGTTTTGATTGCATGGATGTCTGTTTATCACATGTAGGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR CAA 90 bp | TCTGACACCCTCACCTGGCCTACATGTGATAAACAGACATCCATGCAATCAAAATGTCTACGCAGCAAGTaGCAGATTAAAGGCAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: SDTLTWPTCDKQTSMQSKCLRSK*QIKGRT Trigger: GGTCCTGCCTTTAATCTGCAACTTGCTGCGTAGACA...TTTTGATTGCATGGATGTCTGTTTATCACATGTAGGCCAGGTGAGGGTGTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR CAA 90 bp | AGAGGTCCAGGACAGCCAGGGCTACATAGAGAAGCATTGGGAAAAACAAACAAATGTCTTATCCACACCTaGTATTTGTATGTGGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RGPGQPGLHREALGKTNKCLIHT*YLYVAP Trigger: GGGAGCCACATACAAATACAAGGTGTGGATAAGACA...TTTGTTTGTTTTTCCCAATGCTTCTCTATGTAGCCCTGGCTGTCCTGGACCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS-3UTR CAA 90 bp | CTACATGTGATAAACAGACATCCATGCAATCAAAACACCCATACAGTACTGGGGAACTTCATGAGTGTCTaGAGGGCCAGTTCCTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: LHVINRHPCNQNTHTVLGNFMSV*RASSLT Trigger: GGTCAAGGAACTGGCCCTCAAGACACTCATGAAGTT...CCCCAGTACTGTATGGGTGTTTTGATTGCATGGATGTCTGTTTATCACATGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CAA 72 bp | ACTCGTCAGCACTGCCTCCAGGAGGCGGCCGAGCTCTaGCCTGGAGCTCGCCGAAGCTGGGTGCCGCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: TRQHCLQEAAEL*PGARRSWVPLH Trigger: ATGGAGCGGCACCCAGCTTCGGCGAGCTCCAGGCAAGAGCTCGGCCGCCTCCTGGAGGCAGTGCTGACGAGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CCA 72 bp | CAGGAGGTGCTGTTAGCGCCAGCCGAGCCAGGCGTTTaGCAAAGGCAGCCACCAGGTAGGCAGGGAGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: QEVLLAPAEPGV*QRQPPGRQGGG Trigger: CCCACCTCCCTGCCTACCTGGTGGCTGCCTTTGCCAAACGCCTGGCTCGGCTGGCGCTAACAGCACCTCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS GCA 72 bp | CCCGCTCCAGCAAGGTACCGAAGAGTCGGCTGCACGTaGGCACTCCTTCCTCGATTTCCTCGGGCTCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: PAPARYRRVGCT*ALLPRFPRAPR Trigger: CCGAGGAGCCCGAGGAAATCGAGGAAGGAGTGCGCACGTGCAGCCGACTCTTCGGTACCTTGCTGGAGCGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CCA 72 bp | GCATTGTTCCAGAGGGTGAGGGACACCTCAGGTTGCTaGCTGGTGGCCCGGGCCATGATGCTAGTGGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: ALFQRVRDTSGC*LVARAMMLVAT Trigger: GGTGGCCACTAGCATCATGGCCCGGGCCACCAGCCAGCAACCTGAGGTGTCCCTCACCCTCTGGAACAATGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS GCA 72 bp | GCTCTTCCCGCTCCAGCAAGGTACCGAAGAGTCGGCTaGACGTGCGCACTCCTTCCTCGATTTCCTCGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ALPAPARYRRVG*TCALLPRFPRA Trigger: AGCCCGAGGAAATCGAGGAAGGAGTGCGCACGTGCAGCCGACTCTTCGGTACCTTGCTGGAGCGGGAAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS GCA 72 bp | AAGGCATTGTTCCAGAGGGTGAGGGACACCTCAGGTTaGTGGCTGGTGGCCCGGGCCATGATGCTAGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: KALFQRVRDTSG*WLVARAMMLVA Trigger: GGCCACTAGCATCATGGCCCGGGCCACCAGCCAGCAACCTGAGGTGTCCCTCACCCTCTGGAACAATGCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CAA 72 bp | GAAGGCATTGTTCCAGAGGGTGAGGGACACCTCAGGTaGCTGGCTGGTGGCCCGGGCCATGATGCTAGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: EGIVPEGEGHLR*LAGGPGHDASG Trigger: GCCACTAGCATCATGGCCCGGGCCACCAGCCAGCAACCTGAGGTGTCCCTCACCCTCTGGAACAATGCCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CAA 90 bp | ACAAGCAGCTCTCCAGGGCACGGCTTCTGGCTGGGTCCTTCTCCGTaGGGTCATATGGATCAGCATCTAGCTCAGGGCCCTGTGGGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: TSSSPGHGFWLGPSP*GHMDQHLAQGPVGG Trigger: ACCGCCCACAGGGCCCTGAGCTAGATGCTGATCCATATGACCCAACGGAGAAGGACCCAGCCAGAAGCCGTGCCCTGGAGAGCTGCTTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS GCA 72 bp | TATGGATCAGCATCTAGCTCAGGGCCCTGTGGGCGGTaGACCATAACTCGGCAGGCAGGGTGTCTACGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: YGSASSSGPCGR*TITRQAGCLRS Trigger: GCTGCGTAGACACCCTGCCTGCCGAGTTATGGTGCACCGCCCACAGGGCCCTGAGCTAGATGCTGATCCATA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CCA 72 bp | AGTGGCGCGATGCTGACCTCAGGGACAGACAGCACCTaGTTGATGACACTGGCGGCTTTCGACACCTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SGAMLTSGTDST*LMTLAAFDTSG Trigger: CCCTGAGGTGTCGAAAGCCGCCAGTGTCATCAACCAGGTGCTGTCTGTCCCTGAGGTCAGCATCGCGCCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CAA 90 bp | CAGCAATGTGAAGGCATTGTTCCAGAGGGTGAGGGACACCTCAGGTaGCTGGCTGGTGGCCCGGGCCATGATGCTAGTGGCCACCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: QQCEGIVPEGEGHLR*LAGGPGHDASGHLH Trigger: ATGCAGGTGGCCACTAGCATCATGGCCCGGGCCACCAGCCAGCAACCTGAGGTGTCCCTCACCCTCTGGAACAATGCCTTCACATTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS TCA 72 bp | CGCACTCCTTCCTCGATTTCCTCGGGCTCCTCGGACTaGAGCACAGCCAAGATGTCGAACACCGCGTTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: RTPSSISSGSSD*STAKMSNTAFA Trigger: AGCGAACGCGGTGTTCGACATCTTGGCTGTGCTTCAGTCCGAGGAGCCCGAGGAAATCGAGGAAGGAGTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CCA 72 bp | GCAGTTCCCACAAGCAGCTCTCCAGGGCACGGCTTCTaGCTGGGTCCTTCTCCGTTGGGTCATATGGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: AVPTSSSPGHGF*LGPSPLGHMDQ Trigger: CTGATCCATATGACCCAACGGAGAAGGACCCAGCCAGAAGCCGTGCCCTGGAGAGCTGCTTGTGGGAACTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CAA 72 bp | TCTCCAGGGCACGGCTTCTGGCTGGGTCCTTCTCCGTaGGGTCATATGGATCAGCATCTAGCTCAGGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SPGHGFWLGPSP*GHMDQHLAQGP Trigger: AGGGCCCTGAGCTAGATGCTGATCCATATGACCCAACGGAGAAGGACCCAGCCAGAAGCCGTGCCCTGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CAA 90 bp | GGGCGGTGCACCATAACTCGGCAGGCAGGGTGTCTACGCAGCAAGTaGCAGATTAAAGGCAGGACCATAAGTAGGGCCTCAGGAGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GRCTITRQAGCLRSK*QIKGRTISRASGGA Trigger: AGCACCTCCTGAGGCCCTACTTATGGTCCTGCCTTTAATCTGCAACTTGCTGCGTAGACACCCTGCCTGCCGAGTTATGGTGCACCGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CCA 72 bp | TGTCTTATCCACACCTTGTATTTGTATGTGGCTCCCTaGGACCCTGCCAGGGCCGTGTCTTCGCTCGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CLIHTLYLYVAP*DPARAVSSLGS Trigger: GCTGCCGAGCGAAGACACGGCCCTGGCAGGGTCCCAGGGAGCCACATACAAATACAAGGTGTGGATAAGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
||
| CDS CCA 72 bp | CAGGCACTTGTGAGGAAGTCAATCATGAGTGTGGGTTaGGCCAGGTGGGGCAGGATGGAGTCATGCATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: QALVRKSIMSVG*ARWGRMESCMA Trigger: GGCCATGCATGACTCCATCCTGCCCCACCTGGCCCAACCCACACTCATGATTGACTTCCTCACAAGTGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
||
| CDS CCA 72 bp | TTCCCACAAGCAGCTCTCCAGGGCACGGCTTCTGGCTaGGTCCTTCTCCGTTGGGTCATATGGATCAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: FPQAALQGTASG*VLLRWVIWISI Trigger: GATGCTGATCCATATGACCCAACGGAGAAGGACCCAGCCAGAAGCCGTGCCCTGGAGAGCTGCTTGTGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
||
| CDS GCA 72 bp | TGGCTGGTGGCCCGGGCCATGATGCTAGTGGCCACCTaGATTGTGTGGTACCGGATGTCATCATATTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: WLVARAMMLVAT*IVWYRMSSYSK Trigger: CTTGGAATATGATGACATCCGGTACCACACAATGCAGGTGGCCACTAGCATCATGGCCCGGGCCACCAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
||
| CDS CCA 72 bp | AACTTCATGAGTGTCTTGAGGGCCAGTTCCTTGACCTaGAAGGTGGGATGGGCCAGGAGTTCCTCTAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: NFMSVLRASSLT*KVGWARSSSRR Trigger: CCGCCTAGAGGAACTCCTGGCCCATCCCACCTTCCAGGTCAAGGAACTGGCCCTCAAGACACTCATGAAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
||
| CDS CAA 72 bp | AGGGGTAGGCTCACAGCAGACAGCAATGTGAAGGCATaGTTCCAGAGGGTGAGGGACACCTCAGGTTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RGRLTADSNVKA*FQRVRDTSGCW Trigger: CCAGCAACCTGAGGTGTCCCTCACCCTCTGGAACAATGCCTTCACATTGCTGTCTGCTGTGAGCCTACCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CAA 90 bp | CGGTTACAGCAGCTGTGGTATCGATGTCTTATCCACACCTTGTATTaGTATGTGGCTCCCTGGGACCCTGCCAGGGCCGTGTCTTCGCTC | + |
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Preference number: 6 (lower is better) Translates to: RLQQLWYRCLIHTLY*YVAPWDPARAVSSL Trigger: GAGCGAAGACACGGCCCTGGCAGGGTCCCAGGGAGCCACATACAAATACAAGGTGTGGATAAGACATCGATACCACAGCTGCTGTAACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CAA 90 bp | CCTTCCAGCTGCACAAACTTCATGAGTGTCTTGAGGGCCAGTTCCTaGACCTGGAAGGTGGGATGGGCCAGGAGTTCCTCTAGGCGGTTA | + |
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Preference number: 6 (lower is better) Translates to: PSSCTNFMSVLRASS*TWKVGWARSSSRRL Trigger: TAACCGCCTAGAGGAACTCCTGGCCCATCCCACCTTCCAGGTCAAGGAACTGGCCCTCAAGACACTCATGAAGTTTGTGCAGCTGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CCA 72 bp | GGTATCGATGTCTTATCCACACCTTGTATTTGTATGTaGCTCCCTGGGACCCTGCCAGGGCCGTGTCTTCGC | + |
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Preference number: 6 (lower is better) Translates to: GIDVLSTPCICM*LPGTLPGPCLR Trigger: GCGAAGACACGGCCCTGGCAGGGTCCCAGGGAGCCACATACAAATACAAGGTGTGGATAAGACATCGATACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CAA 90 bp | TCTAGGCGGTTACAGCAGCTGTGGTATCGATGTCTTATCCACACCTaGTATTTGTATGTGGCTCCCTGGGACCCTGCCAGGGCCGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: SRRLQQLWYRCLIHT*YLYVAPWDPARAVS Trigger: AGACACGGCCCTGGCAGGGTCCCAGGGAGCCACATACAAATACAAGGTGTGGATAAGACATCGATACCACAGCTGCTGTAACCGCCTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CCA 72 bp | TCCAAGTACTCACAGAAATGGGAGATAAGCAGGCTGTaGTCGTCCTCTGGTGTGAGCAGGCCTCCTACCACT | + |
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Preference number: 6 (lower is better) Translates to: SKYSQKWEISRL*SSSGVSRPPTT Trigger: AGTGGTAGGAGGCCTGCTCACACCAGAGGACGACCACAGCCTGCTTATCTCCCATTTCTGTGAGTACTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CCA 72 bp | GCCCGGGCCATGATGCTAGTGGCCACCTGCATTGTGTaGTACCGGATGTCATCATATTCCAAGTACTCACAG | + |
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Preference number: 6 (lower is better) Translates to: ARAMMLVATCIV*YRMSSYSKYSQ Trigger: CTGTGAGTACTTGGAATATGATGACATCCGGTACCACACAATGCAGGTGGCCACTAGCATCATGGCCCGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CCA 72 bp | CTGCTCAAAGATCTCATATGCAGTAAGTTCCAGGAGTaGCGCGATGCTGACCTCAGGGACAGACAGCACCTG | + |
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Preference number: 6 (lower is better) Translates to: LLKDLICSKFQE*RDADLRDRQHL Trigger: CAGGTGCTGTCTGTCCCTGAGGTCAGCATCGCGCCACTCCTGGAACTTACTGCATATGAGATCTTTGAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CAA 72 bp | TGCACAAACTTCATGAGTGTCTTGAGGGCCAGTTCCTaGACCTGGAAGGTGGGATGGGCCAGGAGTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: CTNFMSVLRASS*TWKVGWARSSS Trigger: AGAGGAACTCCTGGCCCATCCCACCTTCCAGGTCAAGGAACTGGCCCTCAAGACACTCATGAAGTTTGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CAA 72 bp | TTTGCTCCTTCCAGCTGCACAAACTTCATGAGTGTCTaGAGGGCCAGTTCCTTGACCTGGAAGGTGGGATGG | + |
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Preference number: 6 (lower is better) Translates to: FAPSSCTNFMSV*RASSLTWKVGW Trigger: CCATCCCACCTTCCAGGTCAAGGAACTGGCCCTCAAGACACTCATGAAGTTTGTGCAGCTGGAAGGAGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CAA 72 bp | ACCATAACTCGGCAGGCAGGGTGTCTACGCAGCAAGTaGCAGATTAAAGGCAGGACCATAAGTAGGGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: TITRQAGCLRSK*QIKGRTISRAS Trigger: TGAGGCCCTACTTATGGTCCTGCCTTTAATCTGCAACTTGCTGCGTAGACACCCTGCCTGCCGAGTTATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CAA 72 bp | TTACAGCAGCTGTGGTATCGATGTCTTATCCACACCTaGTATTTGTATGTGGCTCCCTGGGACCCTGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LQQLWYRCLIHT*YLYVAPWDPAR Trigger: CCTGGCAGGGTCCCAGGGAGCCACATACAAATACAAGGTGTGGATAAGACATCGATACCACAGCTGCTGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS TCA 72 bp | TGTCTGATGTCTGTGCATGCTTCACATAGAAGTTGGTaGGTTCACACTCTTGGAGGGGTAGGCTCACAGCAG | + |
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Preference number: 6 (lower is better) Translates to: CLMSVHASHRSW*VHTLGGVGSQQ Trigger: CTGCTGTGAGCCTACCCCTCCAAGAGTGTGAACTCACCAACTTCTATGTGAAGCATGCACAGACATCAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS TCA 72 bp | AGAGGTCAGCCAAGTGGAAGAAACGGGCTCGGTACTTaGCATGAAAGATGGATGGATCCAGGAGACCATAGA | + |
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Preference number: 6 (lower is better) Translates to: RGQPSGRNGLGT*HERWMDPGDHR Trigger: TCTATGGTCTCCTGGATCCATCCATCTTTCATGTCAAGTACCGAGCCCGTTTCTTCCACTTGGCTGACCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS TCA 72 bp | CACATCTCCTGGAAAGCTTTCTTGTGCTCCTTCAAGTaGACGACCTTCCACTTGTCTGATGTCTGTGCATGC | + |
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Preference number: 6 (lower is better) Translates to: HISWKAFLCSFK*TTFHLSDVCAC Trigger: GCATGCACAGACATCAGACAAGTGGAAGGTCGTTCACTTGAAGGAGCACAAGAAAGCTTTCCAGGAGATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CCA 72 bp | TGGGCCAGGAGTTCCTCTAGGCGGTTACAGCAGCTGTaGTATCGATGTCTTATCCACACCTTGTATTTGTAT | + |
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Preference number: 6 (lower is better) Translates to: WARSSSRRLQQL*YRCLIHTLYLY Trigger: ATACAAATACAAGGTGTGGATAAGACATCGATACCACAGCTGCTGTAACCGCCTAGAGGAACTCCTGGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CCA 72 bp | TACCGGATGTCATCATATTCCAAGTACTCACAGAAATaGGAGATAAGCAGGCTGTGGTCGTCCTCTGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: YRMSSYSKYSQK*EISRLWSSSGV Trigger: CACACCAGAGGACGACCACAGCCTGCTTATCTCCCATTTCTGTGAGTACTTGGAATATGATGACATCCGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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| CDS CCA 72 bp | GAAGAAACGGGCTCGGTACTTGACATGAAAGATGGATaGATCCAGGAGACCATAGAGCTTCTGGTAGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: EETGSVLDMKDG*IQETIELLVEV Trigger: GACTTCTACCAGAAGCTCTATGGTCTCCTGGATCCATCCATCTTTCATGTCAAGTACCGAGCCCGTTTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042147.6 |
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