Pregenerated sensors for NOC3L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024999Ensembl transcript IDs: ENSMUST00000025963.8
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGCACGTCTGCAGGGCATTTGTAGATTTCATGACTGATGGGCAGTaGCATTCCTGGACAAGTTGGTGTGGACTGTATAAAAAGGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: WHVCRAFVDFMTDGQ*HSWTSWCGLYKKAG Trigger: GCCTGCCTTTTTATACAGTCCACACCAACTTGTCCAGGAATGGCACTGCCCATCAGTCATGAAATCTACAAATGCCCTGCAGACGTGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR CCA 90 bp | GGCCGAGCAAGGCATGAAAAGCAAGCCAATGAGCAGGGTCTTCTGTaGCCCTGCTCCAGTTCTCAAATAATCATTCTTAGGAAGTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: GRARHEKQANEQGLL*PCSSSQIIILRKSS Trigger: GGAAGACTTCCTAAGAATGATTATTTGAGAACTGGAGCAGGGCCACAGAAGACCCTGCTCATTGGCTTGCTTTTCATGCCTTGCTCGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR GCA 90 bp | GCAAGGCATGAAAAGCAAGCCAATGAGCAGGGTCTTCTGTGGCCCTaGTCCAGTTCTCAAATAATCATTCTTAGGAAGTCTTCCTTGTAC | + |
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Preference number: 1 (lower is better) Translates to: ARHEKQANEQGLLWP*SSSQIIILRKSSLY Trigger: GTACAAGGAAGACTTCCTAAGAATGATTATTTGAGAACTGGAGCAGGGCCACAGAAGACCCTGCTCATTGGCTTGCTTTTCATGCCTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR CCA 90 bp | CCTGGTTGGACAGGAACCGATATTCCTATGGCACAATGGAAATCTTaGACCTTTCATCTTACTGAGCAATTTTCCCCTATCACTCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: PGWTGTDIPMAQWKS*TFHLTEQFSPITLR Trigger: CCTGAGAGTGATAGGGGAAAATTGCTCAGTAAGATGAAAGGTCCAAGATTTCCATTGTGCCATAGGAATATCGGTTCCTGTCCAACCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR CCA 90 bp | AAACACTTTCCTGGTTGGACAGGAACCGATATTCCTATGGCACAATaGAAATCTTGGACCTTTCATCTTACTGAGCAATTTTCCCCTATC | + |
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Preference number: 1 (lower is better) Translates to: KHFPGWTGTDIPMAQ*KSWTFHLTEQFSPI Trigger: GATAGGGGAAAATTGCTCAGTAAGATGAAAGGTCCAAGATTTCCATTGTGCCATAGGAATATCGGTTCCTGTCCAACCAGGAAAGTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR CAA 90 bp | TCATCGGATCCCCCAACAACCGGAGCTGGTCCTACCCTGACTCTGTaGCCTGCCCGTGGACCCTGTTCTCCTACCTGGGCTGTCTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: SSDPPTTGAGPTLTL*PARGPCSPTWAVLS Trigger: AGACAAGACAGCCCAGGTAGGAGAACAGGGTCCACGGGCAGGCAACAGAGTCAGGGTAGGACCAGCTCCGGTTGTTGGGGGATCCGATGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR-3UTR TCA 90 bp | GAGAAAAACACTTTCCTGGTTGGACAGGAACCGATATTCCTATGGCACAATGGAAGTCCTGTAGTGACTTaGGGTGCCAGGGTGGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: EKNTFLVGQEPIFLWHNGSPVVT*GARVGR Trigger: TCTACCCACCCTGGCACCTCAAGTCACTACAGGACT...TCCATTGTGCCATAGGAATATCGGTTCCTGTCCAACCAGGAAAGTGTTTTTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR-3UTR GCA 90 bp | TTAAAGGTCAGATTTGGTCATTCCTTGTGTCATTCAACAAGAGCCAATGAACAACCTGACTCTGTTGCCTaGCCGTGGACCCTGTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LKVRFGHSLCHSTRANEQPDSVA*PWTLFS Trigger: GGAGAACAGGGTCCACGGGCAGGCAACAGAGTCAGG...TTGTTCATTGGCTCTTGTTGAATGACACAAGGAATGACCAAATCTGACCTTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR-3UTR GCA 90 bp | TGGACAGGAACCGATATTCCTATGGCACAATGGAAATCTTGGACCTTTCATCTTAGACTATGGCACGTCTaGAGGGCATTTGTAGATTTC | + |
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Preference number: 2 (lower is better) Translates to: WTGTDIPMAQWKSWTFHLRLWHV*RAFVDF Trigger: GAAATCTACAAATGCCCTGCAGACGTGCCATAGTCT...AAGATGAAAGGTCCAAGATTTCCATTGTGCCATAGGAATATCGGTTCCTGTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR-3UTR CCA 90 bp | ACATATACAGTTTTTATCTGTAAGAATTTAAGGTGGGCGGTGGTGGCGCACGTCGAAAGGGATCTACGATaGGGATGTAAAGTGAATAAG | + |
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Preference number: 2 (lower is better) Translates to: TYTVFICKNLRWAVVAHVERDLR*GCKVNK Trigger: CTTATTCACTTTACATCCCCATCGTAGATCCCTTTC...GACGTGCGCCACCACCGCCCACCTTAAATTCTTACAGATAAAAACTGTATATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR-3UTR CCA 90 bp | ACATATACAGTTTTTATCTGTAAGAATTTAAGGTGGGCGGTGGTGGCGCACGTCGAACCGATATTCCTATaGCACAATGGAAATCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: TYTVFICKNLRWAVVAHVEPIFL*HNGNLG Trigger: TCCAAGATTTCCATTGTGCCATAGGAATATCGGTTC...GACGTGCGCCACCACCGCCCACCTTAAATTCTTACAGATAAAAACTGTATATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR-3UTR CCA 90 bp | TGGACAGGAACCGATATTCCTATGGCACAATGGAAATCTTGGACCTTTCATCTTCTTAAAGGTCAGATTTaGTCATTCCTTGTGTCATTC | + |
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Preference number: 2 (lower is better) Translates to: WTGTDIPMAQWKSWTFHLLKGQI*SFLVSF Trigger: GAATGACACAAGGAATGACCAAATCTGACCTTTAAG...AAGATGAAAGGTCCAAGATTTCCATTGTGCCATAGGAATATCGGTTCCTGTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR CAA 90 bp | AATGAGAGCACTCATTCCTCCTTAAAGGTCAGATTTGGTCATTCCTaGTGTCATTCAACAAGAGCCAATGAACAAGAGTATAACTTTAAC | + |
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Preference number: 2 (lower is better) Translates to: NESTHSSLKVRFGHS*CHSTRANEQEYNFN Trigger: GTTAAAGTTATACTCTTGTTCATTGGCTCTTGTTGAATGACACAAGGAATGACCAAATCTGACCTTTAAGGAGGAATGAGTGCTCTCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR CCA 72 bp | AGGCTGGTCTTCATCGGATCCCCCAACAACCGGAGCTaGTCCTACCCTGACTCTGTTGCCTGCCCGTGGACC | + |
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Preference number: 3 (lower is better) Translates to: RLVFIGSPNNRS*SYPDSVACPWT Trigger: GGTCCACGGGCAGGCAACAGAGTCAGGGTAGGACCAGCTCCGGTTGTTGGGGGATCCGATGAAGACCAGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR TCA 72 bp | CATCGGATCCCCCAACAACCGGAGCTGGTCCTACCCTaGCTCTGTTGCCTGCCCGTGGACCCTGTTCTCCTA | + |
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Preference number: 3 (lower is better) Translates to: HRIPQQPELVLP*LCCLPVDPVLL Trigger: TAGGAGAACAGGGTCCACGGGCAGGCAACAGAGTCAGGGTAGGACCAGCTCCGGTTGTTGGGGGATCCGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR GCA 72 bp | AACAACCGGAGCTGGTCCTACCCTGACTCTGTTGCCTaGCCGTGGACCCTGTTCTCCTACCTGGGCTGTCTT | + |
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Preference number: 3 (lower is better) Translates to: NNRSWSYPDSVA*PWTLFSYLGCL Trigger: AAGACAGCCCAGGTAGGAGAACAGGGTCCACGGGCAGGCAACAGAGTCAGGGTAGGACCAGCTCCGGTTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR CCA 72 bp | ACTCTGTTGCCTGCCCGTGGACCCTGTTCTCCTACCTaGGCTGTCTTGTCTGAACTCACTAAAAGAGGATGT | + |
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Preference number: 3 (lower is better) Translates to: TLLPARGPCSPT*AVLSELTKRGC Trigger: ACATCCTCTTTTAGTGAGTTCAGACAAGACAGCCCAGGTAGGAGAACAGGGTCCACGGGCAGGCAACAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR-3UTR CAA 90 bp | GCAAGGCATGAAAAGCAAGCCAATGAGCAGGGTCTTCTGTGGCCCTGCTCCAGTCTTAGGAAGTCTTCCTaGTACAAACAGAAACAGGCC | + |
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Preference number: 3 (lower is better) Translates to: ARHEKQANEQGLLWPCSSLRKSS*YKQKQA Trigger: GGCCTGTTTCTGTTTGTACAAGGAAGACTTCCTAAG...ACTGGAGCAGGGCCACAGAAGACCCTGCTCATTGGCTTGCTTTTCATGCCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR TCA 72 bp | ATGGCACGTCTGCAGGGCATTTGTAGATTTCATGACTaGTGGGCAGTGCCATTCCTGGACAAGTTGGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: MARLQGICRFHD*WAVPFLDKLVW Trigger: CCACACCAACTTGTCCAGGAATGGCACTGCCCATCAGTCATGAAATCTACAAATGCCCTGCAGACGTGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR GCA 72 bp | GAAGGACTGCCTCCACAGACTAGACTATGGCACGTCTaGAGGGCATTTGTAGATTTCATGACTGATGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: EGLPPQTRLWHV*RAFVDFMTDGQ Trigger: CTGCCCATCAGTCATGAAATCTACAAATGCCCTGCAGACGTGCCATAGTCTAGTCTGTGGAGGCAGTCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR CCA 72 bp | TTCATGACTGATGGGCAGTGCCATTCCTGGACAAGTTaGTGTGGACTGTATAAAAAGGCAGGCCGAGCAAGG | + |
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Preference number: 3 (lower is better) Translates to: FMTDGQCHSWTS*CGLYKKAGRAR Trigger: CCTTGCTCGGCCTGCCTTTTTATACAGTCCACACCAACTTGTCCAGGAATGGCACTGCCCATCAGTCATGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR-3UTR CAA 90 bp | TGGTGTGGACTGTATAAAAAGGCAGGCCGAGCAAGGCATGAAAAGCAAGCCAATGGCCCTCACATATCCTaGTGTCTCTGCCATGCACAT | + |
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Preference number: 3 (lower is better) Translates to: WCGLYKKAGRARHEKQANGPHIS*CLCHAH Trigger: ATGTGCATGGCAGAGACACAAGGATATGTGAGGGCC...ATTGGCTTGCTTTTCATGCCTTGCTCGGCCTGCCTTTTTATACAGTCCACACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR CCA 72 bp | AGGCATGAAAAGCAAGCCAATGAGCAGGGTCTTCTGTaGCCCTGCTCCAGTTCTCAAATAATCATTCTTAGG | + |
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Preference number: 3 (lower is better) Translates to: RHEKQANEQGLL*PCSSSQIIILR Trigger: CCTAAGAATGATTATTTGAGAACTGGAGCAGGGCCACAGAAGACCCTGCTCATTGGCTTGCTTTTCATGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR CCA 72 bp | ATCTCAACTGAAGGACTGCCTCCACAGACTAGACTATaGCACGTCTGCAGGGCATTTGTAGATTTCATGACT | + |
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Preference number: 3 (lower is better) Translates to: ISTEGLPPQTRL*HVCRAFVDFMT Trigger: AGTCATGAAATCTACAAATGCCCTGCAGACGTGCCATAGTCTAGTCTGTGGAGGCAGTCCTTCAGTTGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR GCA 72 bp | GAAAAGCAAGCCAATGAGCAGGGTCTTCTGTGGCCCTaGTCCAGTTCTCAAATAATCATTCTTAGGAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: EKQANEQGLLWP*SSSQIIILRKS Trigger: AGACTTCCTAAGAATGATTATTTGAGAACTGGAGCAGGGCCACAGAAGACCCTGCTCATTGGCTTGCTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR GCA 72 bp | TGCAGGGCATTTGTAGATTTCATGACTGATGGGCAGTaGCATTCCTGGACAAGTTGGTGTGGACTGTATAAA | + |
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Preference number: 3 (lower is better) Translates to: CRAFVDFMTDGQ*HSWTSWCGLYK Trigger: TTTATACAGTCCACACCAACTTGTCCAGGAATGGCACTGCCCATCAGTCATGAAATCTACAAATGCCCTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR TCA 72 bp | TCTTGTTTAGGTTTTGTCTACTTAACTGGAGTAACCTaGGCAGAGGAAATCTCAACTGAAGGACTGCCTCCA | + |
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Preference number: 3 (lower is better) Translates to: SCLGFVYLTGVT*AEEISTEGLPP Trigger: TGGAGGCAGTCCTTCAGTTGAGATTTCCTCTGCTCAGGTTACTCCAGTTAAGTAGACAAAACCTAAACAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR CCA 72 bp | AACACTTTCCTGGTTGGACAGGAACCGATATTCCTATaGCACAATGGAAATCTTGGACCTTTCATCTTACTG | + |
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Preference number: 3 (lower is better) Translates to: NTFLVGQEPIFL*HNGNLGPFILL Trigger: CAGTAAGATGAAAGGTCCAAGATTTCCATTGTGCCATAGGAATATCGGTTCCTGTCCAACCAGGAAAGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR-3UTR CAA 90 bp | TGGACAGGAACCGATATTCCTATGGCACAATGGAAATCTTGGACCTTTCATCTTAGATTTGGTCATTCCTaGTGTCATTCAACAAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: WTGTDIPMAQWKSWTFHLRFGHS*CHSTRA Trigger: GGCTCTTGTTGAATGACACAAGGAATGACCAAATCT...AAGATGAAAGGTCCAAGATTTCCATTGTGCCATAGGAATATCGGTTCCTGTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR CCA 72 bp | ACAGGAACCGATATTCCTATGGCACAATGGAAATCTTaGACCTTTCATCTTACTGAGCAATTTTCCCCTATC | + |
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Preference number: 3 (lower is better) Translates to: TGTDIPMAQWKS*TFHLTEQFSPI Trigger: GATAGGGGAAAATTGCTCAGTAAGATGAAAGGTCCAAGATTTCCATTGTGCCATAGGAATATCGGTTCCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR CCA 72 bp | ACAACAAAGAATTTAAGAGAAAAACACTTTCCTGGTTaGACAGGAACCGATATTCCTATGGCACAATGGAAA | + |
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Preference number: 3 (lower is better) Translates to: TTKNLREKHFPG*TGTDIPMAQWK Trigger: TTTCCATTGTGCCATAGGAATATCGGTTCCTGTCCAACCAGGAAAGTGTTTTTCTCTTAAATTCTTTGTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| 3UTR CAA 72 bp | CCCCCAACAACCGGAGCTGGTCCTACCCTGACTCTGTaGCCTGCCCGTGGACCCTGTTCTCCTACCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: PPTTGAGPTLTL*PARGPCSPTWA Trigger: AGCCCAGGTAGGAGAACAGGGTCCACGGGCAGGCAACAGAGTCAGGGTAGGACCAGCTCCGGTTGTTGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS-3UTR TCA 90 bp | TGCCTGCCCGTGGACCCTGTTCTCCTACCTGGGCTGTCTTGTCTGAACTCACTACGCTGGCAGAAGAGGTaGCTTCTGGGCCTTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: CLPVDPVLLPGLSCLNSLRWQKR*LLGLLQ Trigger: CTGAAGAAGGCCCAGAAGTCACCTCTTCTGCCAGCG...TAGTGAGTTCAGACAAGACAGCCCAGGTAGGAGAACAGGGTCCACGGGCAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS-3UTR GCA 90 bp | GCAAGGCATGAAAAGCAAGCCAATGAGCAGGGTCTTCTGTGGCCCTGCTCCAGTGCCACATCAGGGTCCTaGTCCATCAGCATGGAACGC | + |
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Preference number: 4 (lower is better) Translates to: ARHEKQANEQGLLWPCSSATSGS*SISMER Trigger: GCGTTCCATGCTGATGGAGCAGGACCCTGATGTGGC...ACTGGAGCAGGGCCACAGAAGACCCTGCTCATTGGCTTGCTTTTCATGCCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS-3UTR TCA 90 bp | CAGGGTCTTCTGTGGCCCTGCTCCAGTTCTCAAATAATCATTCTTAGGAAGTCTGGCTCAGCTCGGGCTTaGGGGCCTCAGAGCCTTCGG | + |
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Preference number: 4 (lower is better) Translates to: QGLLWPCSSSQIIILRKSGSARA*GPQSLR Trigger: CCGAAGGCTCTGAGGCCCTCAAGCCCGAGCTGAGCC...AGACTTCCTAAGAATGATTATTTGAGAACTGGAGCAGGGCCACAGAAGACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS-3UTR GCA 90 bp | TGCCTGCCCGTGGACCCTGTTCTCCTACCTGGGCTGTCTTGTCTGAACTCACTAGTGCAGCTCCCACAGTaGGGTGTTCTGTGCATTACA | + |
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Preference number: 4 (lower is better) Translates to: CLPVDPVLLPGLSCLNSLVQLPQ*GVLCIT Trigger: TGTAATGCACAGAACACCGCACTGTGGGAGCTGCAC...TAGTGAGTTCAGACAAGACAGCCCAGGTAGGAGAACAGGGTCCACGGGCAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS-3UTR CCA 90 bp | GGCATGAAAAGCAAGCCAATGAGCAGGGTCTTCTGTGGCCCTGCTCCAGTTCTCCTCCATCCTTTTAACTaGCCGTTTGCTCTTTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: GMKSKPMSRVFCGPAPVLLHPFN*PFALWV Trigger: GACCCAAAGAGCAAACGGCCAGTTAAAAGGATGGAG...GAGAACTGGAGCAGGGCCACAGAAGACCCTGCTCATTGGCTTGCTTTTCATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS-3UTR TCA 90 bp | TGCCTGCCCGTGGACCCTGTTCTCCTACCTGGGCTGTCTTGTCTGAACTCACTAAAGAGAGATCTCTTGTaGGAAAAGATGCCTTTTGTC | + |
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Preference number: 4 (lower is better) Translates to: CLPVDPVLLPGLSCLNSLKRDLL*EKMPFV Trigger: GACAAAAGGCATCTTTTCTCACAAGAGATCTCTCTT...TAGTGAGTTCAGACAAGACAGCCCAGGTAGGAGAACAGGGTCCACGGGCAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS-3UTR TCA 90 bp | TGCCTGCCCGTGGACCCTGTTCTCCTACCTGGGCTGTCTTGTCTGAACTCACTAACAATGATGTTGTTGTaGAAGTTAAAATGGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: CLPVDPVLLPGLSCLNSLTMMLL*KLKWGR Trigger: CCTGCCCCATTTTAACTTTCACAACAACATCATTGT...TAGTGAGTTCAGACAAGACAGCCCAGGTAGGAGAACAGGGTCCACGGGCAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS-3UTR TCA 90 bp | GGCATGAAAAGCAAGCCAATGAGCAGGGTCTTCTGTGGCCCTGCTCCAGTTCTCCACCTGCATGTAATGTaGACAGTGTCTTGTAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: GMKSKPMSRVFCGPAPVLHLHVM*TVSCRD Trigger: ATCTCTACAAGACACTGTTCACATTACATGCAGGTG...GAGAACTGGAGCAGGGCCACAGAAGACCCTGCTCATTGGCTTGCTTTTCATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS-3UTR GCA 90 bp | GAGAAAAACACTTTCCTGGTTGGACAGGAACCGATATTCCTATGGCACAATGGATCAGCCTCCTCTTCTTaGTGCACGTCAGTGACCGGC | + |
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Preference number: 4 (lower is better) Translates to: EKNTFLVGQEPIFLWHNGSASSS*CTSVTG Trigger: GCCGGTCACTGACGTGCAGCAAGAAGAGGAGGCTGA...TCCATTGTGCCATAGGAATATCGGTTCCTGTCCAACCAGGAAAGTGTTTTTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS-3UTR GCA 90 bp | GGCATGAAAAGCAAGCCAATGAGCAGGGTCTTCTGTGGCCCTGCTCCAGTTCTCTTCAGAGTCTCGGTGTaGAGTTTCAGCTTTTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: GMKSKPMSRVFCGPAPVLFRVSV*SFSFFS Trigger: TGAGAAAAAGCTGAAACTGCACACCGAGACTCTGAA...GAGAACTGGAGCAGGGCCACAGAAGACCCTGCTCATTGGCTTGCTTTTCATGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS-3UTR TCA 90 bp | TGCCTGCCCGTGGACCCTGTTCTCCTACCTGGGCTGTCTTGTCTGAACTCACTAGACTCAATGAGGGTATaGAGAACCACTAATAAATCA | + |
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Preference number: 4 (lower is better) Translates to: CLPVDPVLLPGLSCLNSLDSMRV*RTTNKS Trigger: TGATTTATTAGTGGTTCTTCATACCCTCATTGAGTC...TAGTGAGTTCAGACAAGACAGCCCAGGTAGGAGAACAGGGTCCACGGGCAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS-3UTR TCA 90 bp | TGGTGTGGACTGTATAAAAAGGCAGGCCGAGCAAGGCATGAAAAGCAAGCCAATGCTCCCCAGACTCAATaGGGGTATGAAGAACCACTA | + |
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Preference number: 4 (lower is better) Translates to: WCGLYKKAGRARHEKQANAPQTQ*GYEEPL Trigger: TAGTGGTTCTTCATACCCTCATTGAGTCTGGGGAGC...ATTGGCTTGCTTTTCATGCCTTGCTCGGCCTGCCTTTTTATACAGTCCACACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS-3UTR GCA 90 bp | TTTGTAGATTTCATGACTGATGGGCAGTGCCATTCCTGGACAAGTTGGTGTGGACAACTCCTTCTCCGGTaGGGTTTGCAGAGTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: FVDFMTDGQCHSWTSWCGQLLLR*GLQSSW Trigger: CCAAGAACTCTGCAAACCGCACCGGAGAAGGAGTTG...TCCACACCAACTTGTCCAGGAATGGCACTGCCCATCAGTCATGAAATCTACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS-3UTR TCA 90 bp | TGGTGTGGACTGTATAAAAAGGCAGGCCGAGCAAGGCATGAAAAGCAAGCCAATCTTCCTTTTGGAGTGTaGAGATTCAACAGGCGGATT | + |
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Preference number: 4 (lower is better) Translates to: WCGLYKKAGRARHEKQANLPFGV*RFNRRI Trigger: AATCCGCCTGTTGAATCTTCACACTCCAAAAGGAAG...ATTGGCTTGCTTTTCATGCCTTGCTCGGCCTGCCTTTTTATACAGTCCACACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS-3UTR GCA 90 bp | TGGTGTGGACTGTATAAAAAGGCAGGCCGAGCAAGGCATGAAAAGCAAGCCAATTTTCTCTCGATCACATaGTCTTCTATGGTCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: WCGLYKKAGRARHEKQANFLSIT*SSMVSS Trigger: GGAGCTGACCATAGAAGAGCATGTGATCGAGAGAAA...ATTGGCTTGCTTTTCATGCCTTGCTCGGCCTGCCTTTTTATACAGTCCACACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS-3UTR GCA 90 bp | CAGGGTCTTCTGTGGCCCTGCTCCAGTTCTCAAATAATCATTCTTAGGAAGTCTTCAGCTTTTTCTCAGTaGTTTCCGAAGCTTCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QGLLWPCSSSQIIILRKSSAFSQ*FPKLRP Trigger: AGGCCGAAGCTTCGGAAAGCACTGAGAAAAAGCTGA...AGACTTCCTAAGAATGATTATTTGAGAACTGGAGCAGGGCCACAGAAGACCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR GCA 90 bp | TTAAAGGTCAGATTTGGTCATTCCTTGTGTCATTCAACAAGAGCCAATGAACAAAGAGCCTTCGGATGGTaGCCCAGCAAGCAGATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKVRFGHSLCHSTRANEQRAFGW*PSKQMC Trigger: GCACATCTGCTTGCTGGGGCACCATCCGAAGGCTCT...TTGTTCATTGGCTCTTGTTGAATGACACAAGGAATGACCAAATCTGACCTTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR TCA 90 bp | GAGAAAAACACTTTCCTGGTTGGACAGGAACCGATATTCCTATGGCACAATGGATCACTTCTACCTCCTTaGTCCGCAGGCATAAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: EKNTFLVGQEPIFLWHNGSLLPP*SAGIKM Trigger: CATTTTTATGCCTGCGGATCAAGGAGGTAGAAGTGA...TCCATTGTGCCATAGGAATATCGGTTCCTGTCCAACCAGGAAAGTGTTTTTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR TCA 90 bp | ATCTTACTGAGCAATTTTCCCCTATCACTCTCAGGTAATAAGTTAACCCAACTTAACACCCCGCTGCCCTaGGACTCGTTATCAAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILLSNFPLSLSGNKLTQLNTPLP*DSLSSK Trigger: CTTGCTTGATAACGAGTCTCAGGGCAGCGGGGTGTT...AAGTTGGGTTAACTTATTACCTGAGAGTGATAGGGGAAAATTGCTCAGTAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGTCTTCTGTGGCCCTGCTCCAGTTCTCAAATAATCATTCTTAGGAAGTCTGCATCTTTTACAGCTTaGCTTAGTTTCCTCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QGLLWPCSSSQIIILRKSASFTA*LSFLCS Trigger: AGAGCAGAGGAAACTAAGGCAAGCTGTAAAAGATGC...AGACTTCCTAAGAATGATTATTTGAGAACTGGAGCAGGGCCACAGAAGACCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR GCA 90 bp | GAGAAAAACACTTTCCTGGTTGGACAGGAACCGATATTCCTATGGCACAATGGACGGATTGAATGTCATTaGTGCCATGCTGTAAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EKNTFLVGQEPIFLWHNGRIECH*CHAVSL Trigger: GAGACTTACAGCATGGCAGCAATGACATTCAATCCG...TCCATTGTGCCATAGGAATATCGGTTCCTGTCCAACCAGGAAAGTGTTTTTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR TCA 90 bp | CAAATAATCATTCTTAGGAAGTCTTCCTTGTACAAACAGAAACAGGCCCTCACATCCTGGGGTCTTCAATaGCCTCTTCCTCATCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QIIILRKSSLYKQKQALTSWGLQ*PLPHLP Trigger: TGGAAGATGAGGAAGAGGTCATTGAAGACCCCAGGA...TGTGAGGGCCTGTTTCTGTTTGTACAAGGAAGACTTCCTAAGAATGATTATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGTCTTCTGTGGCCCTGCTCCAGTTCTCAAATAATCATTCTTAGGAAGTCTCACATTTATAAGATGTaGAAACTTGGCAAGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QGLLWPCSSSQIIILRKSHIYKM*KLGKAF Trigger: GAAGGCCTTGCCAAGTTTGCACATCTTATAAATGTG...AGACTTCCTAAGAATGATTATTTGAGAACTGGAGCAGGGCCACAGAAGACCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR GCA 90 bp | ACATATACAGTTTTTATCTGTAAGAATTTAAGGTGGGCGGTGGTGGCGCACGTCGAATTTGGAAGAACCTaGAGAGCAAGTGTACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TYTVFICKNLRWAVVAHVEFGRT*RASVQR Trigger: CCTTTGTACACTTGCTCTGCAGGTTCTTCCAAATTC...GACGTGCGCCACCACCGCCCACCTTAAATTCTTACAGATAAAAACTGTATATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR GCA 90 bp | ATCTTACTGAGCAATTTTCCCCTATCACTCTCAGGTAATAAGTTAACCCAACTTTTCTCCGGTGCGGTTTaGAGAGTTCTTGGCACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILLSNFPLSLSGNKLTQLFSGAV*RVLGTF Trigger: AAAAGTGCCAAGAACTCTGCAAACCGCACCGGAGAA...AAGTTGGGTTAACTTATTACCTGAGAGTGATAGGGGAAAATTGCTCAGTAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR GCA 90 bp | ACATATACAGTTTTTATCTGTAAGAATTTAAGGTGGGCGGTGGTGGCGCACGTCGTTCTGGGAAAAGTATaGATCAATATCCTGGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TYTVFICKNLRWAVVAHVVLGKV*INILVV Trigger: AACTACCAGGATATTGATGCATACTTTTCCCAGAAC...GACGTGCGCCACCACCGCCCACCTTAAATTCTTACAGATAAAAACTGTATATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR CCA 90 bp | GAGAAAAACACTTTCCTGGTTGGACAGGAACCGATATTCCTATGGCACAATGGAGCAAGAGATCTGTTCTaGGAAAAGTATGCATCAATA | + |
|
Preference number: 4 (lower is better) Translates to: EKNTFLVGQEPIFLWHNGARDLF*EKYASI Trigger: TATTGATGCATACTTTTCCCAGAACAGATCTCTTGC...TCCATTGTGCCATAGGAATATCGGTTCCTGTCCAACCAGGAAAGTGTTTTTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR GCA 90 bp | CAAATAATCATTCTTAGGAAGTCTTCCTTGTACAAACAGAAACAGGCCCTCACATGCCTTAGTTTCCTCTaGTCTTTTCGGTACTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QIIILRKSSLYKQKQALTCLSFL*SFRYFL Trigger: CAAGAAGTACCGAAAAGAGCAGAGGAAACTAAGGCA...TGTGAGGGCCTGTTTCTGTTTGTACAAGGAAGACTTCCTAAGAATGATTATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR GCA 90 bp | GAGAAAAACACTTTCCTGGTTGGACAGGAACCGATATTCCTATGGCACAATGGAAAAGAGTTTCTTTACTaGTTCGCAACACATTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EKNTFLVGQEPIFLWHNGKEFLY*FATHFR Trigger: TCTGAAATGTGTTGCGAAGCAGTAAAGAAACTCTTT...TCCATTGTGCCATAGGAATATCGGTTCCTGTCCAACCAGGAAAGTGTTTTTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR GCA 90 bp | TGGACAGGAACCGATATTCCTATGGCACAATGGAAATCTTGGACCTTTCATCTTATGTCATTGCTGCCATaGTGTAAGTCTCAAAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: WTGTDIPMAQWKSWTFHLMSLLP*CKSQKV Trigger: AACTTTTTGAGACTTACAGCATGGCAGCAATGACAT...AAGATGAAAGGTCCAAGATTTCCATTGTGCCATAGGAATATCGGTTCCTGTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR CCA 90 bp | TGGACAGGAACCGATATTCCTATGGCACAATGGAAATCTTGGACCTTTCATCTTACACCCAGAGAAGCTTaGCCTAATTTATCTTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: WTGTDIPMAQWKSWTFHLTPREA*PNLSCL Trigger: TAAACAAGATAAATTAGGCCAAGCTTCTCTGGGTGT...AAGATGAAAGGTCCAAGATTTCCATTGTGCCATAGGAATATCGGTTCCTGTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR CCA 90 bp | TCAGATTTGGTCATTCCTTGTGTCATTCAACAAGAGCCAATGAACAAGAGTATAAGAAGAGGTGACTTCTaGGCCTTCTTCAGTATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SDLVIPCVIQQEPMNKSIRRGDF*AFFSIL Trigger: CAGAATACTGAAGAAGGCCCAGAAGTCACCTCTTCT...TATACTCTTGTTCATTGGCTCTTGTTGAATGACACAAGGAATGACCAAATCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR GCA 90 bp | CAAATAATCATTCTTAGGAAGTCTTCCTTGTACAAACAGAAACAGGCCCTCACATTAAGGACACCACATTaGTCTTCTTCAGCTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QIIILRKSSLYKQKQALTLRTPH*SSSASF Trigger: AAAGGAAGCTGAAGAAGAGCAATGTGGTGTCCTTAA...TGTGAGGGCCTGTTTCTGTTTGTACAAGGAAGACTTCCTAAGAATGATTATTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| 3UTR CAA 72 bp | TCCAGTTCTCAAATAATCATTCTTAGGAAGTCTTCCTaGTACAAACAGAAACAGGCCCTCACATATCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSQIIILRKSS*YKQKQALTYPC Trigger: ACAAGGATATGTGAGGGCCTGTTTCTGTTTGTACAAGGAAGACTTCCTAAGAATGATTATTTGAGAACTGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR TCA 90 bp | TCAGATTTGGTCATTCCTTGTGTCATTCAACAAGAGCCAATGAACAAGAGTATACCTTCTTCAGTATTCTaGAGTAGGTCACAAACACAA | + |
|
Preference number: 4 (lower is better) Translates to: SDLVIPCVIQQEPMNKSIPSSVF*SRSQTQ Trigger: TTGTGTTTGTGACCTACTTCAGAATACTGAAGAAGG...TATACTCTTGTTCATTGGCTCTTGTTGAATGACACAAGGAATGACCAAATCTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR GCA 90 bp | TTAAAGGTCAGATTTGGTCATTCCTTGTGTCATTCAACAAGAGCCAATGAACAATTGCTAAAAGGCCAATaGTTGAATTTGGAAGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: LKVRFGHSLCHSTRANEQLLKGQ*LNLEEP Trigger: AGGTTCTTCCAAATTCAAGCATTGGCCTTTTAGCAA...TTGTTCATTGGCTCTTGTTGAATGACACAAGGAATGACCAAATCTGACCTTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR GCA 90 bp | ATCTTACTGAGCAATTTTCCCCTATCACTCTCAGGTAATAAGTTAACCCAACTTATTGAATGTCATTGCTaGCATGCTGTAAGTCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ILLSNFPLSLSGNKLTQLIECHC*HAVSLK Trigger: TTTGAGACTTACAGCATGGCAGCAATGACATTCAAT...AAGTTGGGTTAACTTATTACCTGAGAGTGATAGGGGAAAATTGCTCAGTAAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR CAA 90 bp | GCAAGGCATGAAAAGCAAGCCAATGAGCAGGGTCTTCTGTGGCCCTGCTCCAGTCTTCTCCGGTGCGGTTaGCAGAGTTCTTGGCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: ARHEKQANEQGLLWPCSSLLRCG*QSSWHF Trigger: AAAGTGCCAAGAACTCTGCAAACCGCACCGGAGAAG...ACTGGAGCAGGGCCACAGAAGACCCTGCTCATTGGCTTGCTTTTCATGCCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS TCA 90 bp | CAAGAGCTCGCTGATGAGAAACCTGCTTTCTGCGCTTGCTTAGCATaGCATCGAGGCAGTGGAGCACAATCTCAATGCCGTCGTTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QELADEKPAFCACLA*HRGSGAQSQCRRWW Trigger: CCACCAACGACGGCATTGAGATTGTGCTCCACTGCCTCGATGTCATGCTAAGCAAGCGCAGAAAGCAGGTTTCTCATCAGCGAGCTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR CAA 90 bp | GAGAAAAACACTTTCCTGGTTGGACAGGAACCGATATTCCTATGGCACAATGGACTCAGCCTCCTCTTCTaGCTGCACGTCAGTGACCGG | + |
|
Preference number: 5 (lower is better) Translates to: EKNTFLVGQEPIFLWHNGLSLLF*LHVSDR Trigger: CCGGTCACTGACGTGCAGCAAGAAGAGGAGGCTGAG...TCCATTGTGCCATAGGAATATCGGTTCCTGTCCAACCAGGAAAGTGTTTTTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS GCA 90 bp | ATTGAATGTCATTGCTGCCATGCTGTAAGTCTCAAAAAGTTCAACTaGAGATCTTCGGCTCAGCTCGGGCTTGAGGGCCTCAGAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IECHCCHAVSLKKFN*RSSAQLGLEGLRAF Trigger: GAAGGCTCTGAGGCCCTCAAGCCCGAGCTGAGCCGAAGATCTGCAGTTGAACTTTTTGAGACTTACAGCATGGCAGCAATGACATTCAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR CAA 90 bp | TCAGATTTGGTCATTCCTTGTGTCATTCAACAAGAGCCAATGAACAAGAGTATACGGCTCAGCTCGGGCTaGAGGGCCTCAGAGCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SDLVIPCVIQQEPMNKSIRLSSG*RASEPS Trigger: CGAAGGCTCTGAGGCCCTCAAGCCCGAGCTGAGCCG...TATACTCTTGTTCATTGGCTCTTGTTGAATGACACAAGGAATGACCAAATCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS TCA 90 bp | CCGGATTTTATACGAGGGAGTGATGTCCTTAAACAGCTCCATCAGTaGGATGATAACCAACTTCCGGACAGTGACAGCCACATCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PDFIRGSDVLKQLHQ*DDNQLPDSDSHIRV Trigger: GACCCTGATGTGGCTGTCACTGTCCGGAAGTTGGTTATCATCTCACTGATGGAGCTGTTTAAGGACATCACTCCCTCGTATAAAATCCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS TCA 90 bp | GACCCATCGTTCATCAGAGGGACAATCAGTACAATGATGTTGTTGTaGAAGTTAAAATGGGGCAGGGCCACCAACAGCTCACACAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DPSFIRGTISTMMLL*KLKWGRATNSSHRL Trigger: GAGCCTGTGTGAGCTGTTGGTGGCCCTGCCCCATTTTAACTTTCACAACAACATCATTGTACTGATTGTCCCTCTGATGAACGATGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS TCA 90 bp | GAACCGCTGGCAGAAGAGGTGACTTCTGGGCCTTCTTCAGTATTCTaGAGTAGGTCACAAACACAATATTCAGAGTCTCGGTGTGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: EPLAEEVTSGPSSVF*SRSQTQYSESRCAV Trigger: AACTGCACACCGAGACTCTGAATATTGTGTTTGTGACCTACTTCAGAATACTGAAGAAGGCCCAGAAGTCACCTCTTCTGCCAGCGGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS GCA 90 bp | ATCCTGGTAGTTGCTAAAAGGCCAATGCTTGAATTTGGAAGAACCTaGAGAGCAAGTGTACAAAGGCGTTTGATGAAGGCAAGAGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: ILVVAKRPMLEFGRT*RASVQRRLMKARAR Trigger: GCGAGCTCTTGCCTTCATCAAACGCCTTTGTACACTTGCTCTGCAGGTTCTTCCAAATTCAAGCATTGGCCTTTTAGCAACTACCAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR CAA 90 bp | TGGACAGGAACCGATATTCCTATGGCACAATGGAAATCTTGGACCTTTCATCTTCTTTTAACTGGCCGTTaGCTCTTTGGGTCCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WTGTDIPMAQWKSWTFHLLLTGR*LFGSSS Trigger: GCTGGAGGACCCAAAGAGCAAACGGCCAGTTAAAAG...AAGATGAAAGGTCCAAGATTTCCATTGTGCCATAGGAATATCGGTTCCTGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS GCA 90 bp | ACTCTTGTCCTTGATAGGGAGCAGGTGAATCAACTCCTTCTCCGGTaGGGTTTGCAGAGTTCTTGGCACTTTTTCATATTTCTCTATCAC | + |
|
Preference number: 5 (lower is better) Translates to: TLVLDREQVNQLLLR*GLQSSWHFFIFLYH Trigger: GTGATAGAGAAATATGAAAAAGTGCCAAGAACTCTGCAAACCGCACCGGAGAAGGAGTTGATTCACCTGCTCCCTATCAAGGACAAGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR CAA 90 bp | TTTGTAGATTTCATGACTGATGGGCAGTGCCATTCCTGGACAAGTTGGTGTGGACTAGTTTTTATCAACTaGCGAAAGCTTGGGACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FVDFMTDGQCHSWTSWCGLVFIN*RKLGTC Trigger: GCAGGTCCCAAGCTTTCGCAAGTTGATAAAAACTAG...TCCACACCAACTTGTCCAGGAATGGCACTGCCCATCAGTCATGAAATCTACAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR CAA 90 bp | TGGTGTGGACTGTATAAAAAGGCAGGCCGAGCAAGGCATGAAAAGCAAGCCAATTTCACTTCTACCTCCTaGATCCGCAGGCATAAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: WCGLYKKAGRARHEKQANFTSTS*IRRHKN Trigger: ATTTTTATGCCTGCGGATCAAGGAGGTAGAAGTGAA...ATTGGCTTGCTTTTCATGCCTTGCTCGGCCTGCCTTTTTATACAGTCCACACCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR CAA 90 bp | ACATATACAGTTTTTATCTGTAAGAATTTAAGGTGGGCGGTGGTGGCGCACGTCGATTCAACAGGCGGATaGAATGTCATTGCTGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: TYTVFICKNLRWAVVAHVDSTGG*NVIAAM Trigger: CATGGCAGCAATGACATTCAATCCGCCTGTTGAATC...GACGTGCGCCACCACCGCCCACCTTAAATTCTTACAGATAAAAACTGTATATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGTCTTCTGTGGCCCTGCTCCAGTTCTCAAATAATCATTCTTAGGAAGTCTCGGTTTGCAGAGTTCTaGGCACTTTTTCATATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QGLLWPCSSSQIIILRKSRFAEF*ALFHIS Trigger: AGAAATATGAAAAAGTGCCAAGAACTCTGCAAACCG...AGACTTCCTAAGAATGATTATTTGAGAACTGGAGCAGGGCCACAGAAGACCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR CAA 90 bp | TGGTGTGGACTGTATAAAAAGGCAGGCCGAGCAAGGCATGAAAAGCAAGCCAATCAAATAAAATTTGTATaGGCTAACCAGGCCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WCGLYKKAGRARHEKQANQIKFV*ANQAFF Trigger: GAAGAAGGCCTGGTTAGCCAATACAAATTTTATTTG...ATTGGCTTGCTTTTCATGCCTTGCTCGGCCTGCCTTTTTATACAGTCCACACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR CAA 90 bp | TTTGTAGATTTCATGACTGATGGGCAGTGCCATTCCTGGACAAGTTGGTGTGGACTTCTTCAGCTTCCTTaGCTTCCAGTCTTTAACTAT | + |
|
Preference number: 5 (lower is better) Translates to: FVDFMTDGQCHSWTSWCGLLQLP*LPVFNY Trigger: ATAGTTAAAGACTGGAAGCAAAGGAAGCTGAAGAAG...TCCACACCAACTTGTCCAGGAATGGCACTGCCCATCAGTCATGAAATCTACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR CAA 90 bp | TCAGATTTGGTCATTCCTTGTGTCATTCAACAAGAGCCAATGAACAAGAGTATAACCTGCTTTCTGCGCTaGCTTAGCATGACATCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SDLVIPCVIQQEPMNKSITCFLR*LSMTSR Trigger: CCTCGATGTCATGCTAAGCAAGCGCAGAAAGCAGGT...TATACTCTTGTTCATTGGCTCTTGTTGAATGACACAAGGAATGACCAAATCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR CAA 90 bp | CAAATAATCATTCTTAGGAAGTCTTCCTTGTACAAACAGAAACAGGCCCTCACAAGTGTACAAAGGCGTTaGATGAAGGCAAGAGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: QIIILRKSSLYKQKQALTSVQRR*MKARAR Trigger: GCGAGCTCTTGCCTTCATCAAACGCCTTTGTACACT...TGTGAGGGCCTGTTTCTGTTTGTACAAGGAAGACTTCCTAAGAATGATTATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR CAA 90 bp | TTTGTAGATTTCATGACTGATGGGCAGTGCCATTCCTGGACAAGTTGGTGTGGAAATATGAAAAGCAGTTaGAACACAGTGGAGACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FVDFMTDGQCHSWTSWCGNMKSS*NTVETF Trigger: GAAAGTCTCCACTGTGTTCAAACTGCTTTTCATATT...TCCACACCAACTTGTCCAGGAATGGCACTGCCCATCAGTCATGAAATCTACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR CAA 90 bp | ACATATACAGTTTTTATCTGTAAGAATTTAAGGTGGGCGGTGGTGGCGCACGTCGTTTTTCTCTTCTCCTaGAAAGTCATGAACCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TYTVFICKNLRWAVVAHVVFLFS*KVMNLL Trigger: CAAAAGGTTCATGACTTTCAAGGAGAAGAGAAAAAC...GACGTGCGCCACCACCGCCCACCTTAAATTCTTACAGATAAAAACTGTATATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS GCA 90 bp | TGCAGAGTTCTTGGCACTTTTTCATATTTCTCTATCACACTCTCATaGTTTCGTTTCTTGATATGGACTGGTTCACTAGAAGAGAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: CRVLGTFSYFSITLS*FRFLIWTGSLEERS Trigger: AGATCTCTCTTCTAGTGAACCAGTCCATATCAAGAAACGAAAGCATGAGAGTGTGATAGAGAAATATGAAAAAGTGCCAAGAACTCTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR CAA 90 bp | ATCTTACTGAGCAATTTTCCCCTATCACTCTCAGGTAATAAGTTAACCCAACTTTCAACTTGCGAAAGCTaGGGACCTGCTTTTTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: ILLSNFPLSLSGNKLTQLSTCES*GPAFYF Trigger: GAAATAAAAAGCAGGTCCCAAGCTTTCGCAAGTTGA...AAGTTGGGTTAACTTATTACCTGAGAGTGATAGGGGAAAATTGCTCAGTAAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
||
| CDS-3UTR CAA 90 bp | TCAGATTTGGTCATTCCTTGTGTCATTCAACAAGAGCCAATGAACAAGAGTATATTTAAGGACACCACATaGCTCTTCTTCAGCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SDLVIPCVIQQEPMNKSIFKDTT*LFFSFL Trigger: AAGGAAGCTGAAGAAGAGCAATGTGGTGTCCTTAAA...TATACTCTTGTTCATTGGCTCTTGTTGAATGACACAAGGAATGACCAAATCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS-3UTR CAA 90 bp | CAAATAATCATTCTTAGGAAGTCTTCCTTGTACAAACAGAAACAGGCCCTCACAATGAACCTTTTGGGCTaGTTAATGTCCTCTGTATCT | + |
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Preference number: 5 (lower is better) Translates to: QIIILRKSSLYKQKQALTMNLLG*LMSSVS Trigger: AGATACAGAGGACATTAACAAGCCCAAAAGGTTCAT...TGTGAGGGCCTGTTTCTGTTTGTACAAGGAAGACTTCCTAAGAATGATTATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS CCA 90 bp | AATTTGTATTGGCTAACCAGGCCTTCTTCAAATTCTCTTAACTTCTaGGTTTCTTTACGAATCTTGGTAGATTTTTCTGCTTCGGTTAGA | + |
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Preference number: 5 (lower is better) Translates to: NLYWLTRPSSNSLNF*VSLRILVDFSASVR Trigger: TCTAACCGAAGCAGAAAAATCTACCAAGATTCGTAAAGAAACCCAGAAGTTAAGAGAATTTGAAGAAGGCCTGGTTAGCCAATACAAATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS-3UTR CAA 90 bp | TCAGATTTGGTCATTCCTTGTGTCATTCAACAAGAGCCAATGAACAAGAGTATAGTTTCTTTACGAATCTaGGTAGATTTTTCTGCTTCG | + |
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Preference number: 5 (lower is better) Translates to: SDLVIPCVIQQEPMNKSIVSLRI*VDFSAS Trigger: CGAAGCAGAAAAATCTACCAAGATTCGTAAAGAAAC...TATACTCTTGTTCATTGGCTCTTGTTGAATGACACAAGGAATGACCAAATCTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS TCA 72 bp | AAAGTTCAACTGCAGATCTTCGGCTCAGCTCGGGCTTaGGGGCCTCAGAGCCTTCGGATGGTGCCCCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: KVQLQIFGSARA*GPQSLRMVPQQ Trigger: TTGCTGGGGCACCATCCGAAGGCTCTGAGGCCCTCAAGCCCGAGCTGAGCCGAAGATCTGCAGTTGAACTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS CAA 72 bp | AAAAGTTCAACTGCAGATCTTCGGCTCAGCTCGGGCTaGAGGGCCTCAGAGCCTTCGGATGGTGCCCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: KSSTADLRLSSG*RASEPSDGAPA Trigger: TGCTGGGGCACCATCCGAAGGCTCTGAGGCCCTCAAGCCCGAGCTGAGCCGAAGATCTGCAGTTGAACTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS CCA 72 bp | TGCTTTCTGCGCTTGCTTAGCATGACATCGAGGCAGTaGAGCACAATCTCAATGCCGTCGTTGGTGGCACCT | + |
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Preference number: 6 (lower is better) Translates to: CFLRLLSMTSRQ*STISMPSLVAP Trigger: AGGTGCCACCAACGACGGCATTGAGATTGTGCTCCACTGCCTCGATGTCATGCTAAGCAAGCGCAGAAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS TCA 72 bp | GGGATGATGCCACTCTTGTCCTTGATAGGGAGCAGGTaGATCAACTCCTTCTCCGGTGCGGTTTGCAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: GMMPLLSLIGSR*INSFSGAVCRV Trigger: AACTCTGCAAACCGCACCGGAGAAGGAGTTGATTCACCTGCTCCCTATCAAGGACAAGAGTGGCATCATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS GCA 72 bp | CATTGCTGCCATGCTGTAAGTCTCAAAAAGTTCAACTaGAGATCTTCGGCTCAGCTCGGGCTTGAGGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: HCCHAVSLKKFN*RSSAQLGLEGL Trigger: GAGGCCCTCAAGCCCGAGCTGAGCCGAAGATCTGCAGTTGAACTTTTTGAGACTTACAGCATGGCAGCAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS CCA 72 bp | TCACTCTGTACTGCCGGGATGAGCTTTCCAAACACTTaGCGAAATCCAGCGGTGTCTCAGGAGCAGCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: SLCTAGMSFPNT*RNPAVSQEQLH Trigger: ATGAAGCTGCTCCTGAGACACCGCTGGATTTCGCCAAGTGTTTGGAAAGCTCATCCCGGCAGTACAGAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS CAA 72 bp | TTCACTCTGTACTGCCGGGATGAGCTTTCCAAACACTaGGCGAAATCCAGCGGTGTCTCAGGAGCAGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: FTLYCRDELSKH*AKSSGVSGAAS Trigger: TGAAGCTGCTCCTGAGACACCGCTGGATTTCGCCAAGTGTTTGGAAAGCTCATCCCGGCAGTACAGAGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS GCA 72 bp | ACCAACTTCCGGACAGTGACAGCCACATCAGGGTCCTaGTCCATCAGCATGGAACGCAACTCTTTCAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: TNFRTVTATSGS*SISMERNSFSF Trigger: AAAACTGAAAGAGTTGCGTTCCATGCTGATGGAGCAGGACCCTGATGTGGCTGTCACTGTCCGGAAGTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS CAA 72 bp | ACATCGAGGCAGTGGAGCACAATCTCAATGCCGTCGTaGGTGGCACCTGCATGTAATGTGAACAGTGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: TSRQWSTISMPS*VAPACNVNSVL Trigger: CAAGACACTGTTCACATTACATGCAGGTGCCACCAACGACGGCATTGAGATTGTGCTCCACTGCCTCGATGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS CAA 90 bp | GTCCTTGATAGGGAGCAGGTGAATCAACTCCTTCTCCGGTGCGGTTaGCAGAGTTCTTGGCACTTTTTCATATTTCTCTATCACACTCTC | + |
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Preference number: 6 (lower is better) Translates to: VLDREQVNQLLLRCG*QSSWHFFIFLYHTL Trigger: GAGAGTGTGATAGAGAAATATGAAAAAGTGCCAAGAACTCTGCAAACCGCACCGGAGAAGGAGTTGATTCACCTGCTCCCTATCAAGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS CAA 90 bp | GGAGCAGGTGAATCAACTCCTTCTCCGGTGCGGTTTGCAGAGTTCTaGGCACTTTTTCATATTTCTCTATCACACTCTCATGCTTTCGTT | + |
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Preference number: 6 (lower is better) Translates to: GAGESTPSPVRFAEF*ALFHISLSHSHAFV Trigger: AACGAAAGCATGAGAGTGTGATAGAGAAATATGAAAAAGTGCCAAGAACTCTGCAAACCGCACCGGAGAAGGAGTTGATTCACCTGCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS GCA 72 bp | CTTGATAGGGAGCAGGTGAATCAACTCCTTCTCCGGTaGGGTTTGCAGAGTTCTTGGCACTTTTTCATATTT | + |
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Preference number: 6 (lower is better) Translates to: LDREQVNQLLLR*GLQSSWHFFIF Trigger: AAATATGAAAAAGTGCCAAGAACTCTGCAAACCGCACCGGAGAAGGAGTTGATTCACCTGCTCCCTATCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS CAA 72 bp | AGGGAGCAGGTGAATCAACTCCTTCTCCGGTGCGGTTaGCAGAGTTCTTGGCACTTTTTCATATTTCTCTAT | + |
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Preference number: 6 (lower is better) Translates to: REQVNQLLLRCG*QSSWHFFIFLY Trigger: ATAGAGAAATATGAAAAAGTGCCAAGAACTCTGCAAACCGCACCGGAGAAGGAGTTGATTCACCTGCTCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS TCA 72 bp | TTCATCAGAGGGACAATCAGTACAATGATGTTGTTGTaGAAGTTAAAATGGGGCAGGGCCACCAACAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: FIRGTISTMMLL*KLKWGRATNSS Trigger: TGAGCTGTTGGTGGCCCTGCCCCATTTTAACTTTCACAACAACATCATTGTACTGATTGTCCCTCTGATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS TCA 72 bp | CTTTACTGCTTCGCAACACATTTCAGATACCGGTTTTaGCCCATCGTTCATCAGAGGGACAATCAGTACAAT | + |
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Preference number: 6 (lower is better) Translates to: LYCFATHFRYRF*PIVHQRDNQYN Trigger: ATTGTACTGATTGTCCCTCTGATGAACGATGGGTCAAAACCGGTATCTGAAATGTGTTGCGAAGCAGTAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS TCA 72 bp | CCTTCCTTTTGGAGTGTGAAGATTCAACAGGCGGATTaGATGTCATTGCTGCCATGCTGTAAGTCTCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: PSFWSVKIQQAD*MSLLPCCKSQK Trigger: TTTTTGAGACTTACAGCATGGCAGCAATGACATTCAATCCGCCTGTTGAATCTTCACACTCCAAAAGGAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS CAA 72 bp | GAATCAACTCCTTCTCCGGTGCGGTTTGCAGAGTTCTaGGCACTTTTTCATATTTCTCTATCACACTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: ESTPSPVRFAEF*ALFHISLSHSH Trigger: ATGAGAGTGTGATAGAGAAATATGAAAAAGTGCCAAGAACTCTGCAAACCGCACCGGAGAAGGAGTTGATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS CAA 72 bp | TCTTTACTGCTTCGCAACACATTTCAGATACCGGTTTaGACCCATCGTTCATCAGAGGGACAATCAGTACAA | + |
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Preference number: 6 (lower is better) Translates to: SLLLRNTFQIPV*THRSSEGQSVQ Trigger: TTGTACTGATTGTCCCTCTGATGAACGATGGGTCAAAACCGGTATCTGAAATGTGTTGCGAAGCAGTAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS GCA 72 bp | TCGTTATCAAGCAAGAGATCTGTTCTGGGAAAAGTATaGATCAATATCCTGGTAGTTGCTAAAAGGCCAATG | + |
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Preference number: 6 (lower is better) Translates to: SLSSKRSVLGKV*INILVVAKRPM Trigger: CATTGGCCTTTTAGCAACTACCAGGATATTGATGCATACTTTTCCCAGAACAGATCTCTTGCTTGATAACGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS CCA 72 bp | TTCTCTATCACACTCTCATGCTTTCGTTTCTTGATATaGACTGGTTCACTAGAAGAGAGATCTCTTGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: FSITLSCFRFLI*TGSLEERSLVR Trigger: TCTCACAAGAGATCTCTCTTCTAGTGAACCAGTCCATATCAAGAAACGAAAGCATGAGAGTGTGATAGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS CCA 72 bp | TGGCTAACCAGGCCTTCTTCAAATTCTCTTAACTTCTaGGTTTCTTTACGAATCTTGGTAGATTTTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: WLTRPSSNSLNF*VSLRILVDFSA Trigger: AGCAGAAAAATCTACCAAGATTCGTAAAGAAACCCAGAAGTTAAGAGAATTTGAAGAAGGCCTGGTTAGCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS TCA 72 bp | GGAGACTTTCTTGATAACTTAGCTCCCCAGACTCAATaGGGGTATGAAGAACCACTAATAAATCATCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: GDFLDNLAPQTQ*GYEEPLINHQK Trigger: TTTTTGATGATTTATTAGTGGTTCTTCATACCCTCATTGAGTCTGGGGAGCTAAGTTATCAAGAAAGTCTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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| CDS GCA 72 bp | CTTGGCACTTTTTCATATTTCTCTATCACACTCTCATaGTTTCGTTTCTTGATATGGACTGGTTCACTAGAA | + |
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Preference number: 6 (lower is better) Translates to: LGTFSYFSITLS*FRFLIWTGSLE Trigger: TTCTAGTGAACCAGTCCATATCAAGAAACGAAAGCATGAGAGTGTGATAGAGAAATATGAAAAAGTGCCAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025963.8 |
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