Pregenerated sensors for NOC2L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095567Ensembl transcript IDs: ENSMUST00000179543.8
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTGCTCTGCAGACAAACCAAAGACAAAGTGGAGAGGAGAGGCCATaGAGCCGCCCTCCCCACTCTGAACTGGGACAACGTCAGGGTCAG | + |
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Preference number: 1 (lower is better) Translates to: SALQTNQRQSGEERP*SRPPHSELGQRQGQ Trigger: CTGACCCTGACGTTGTCCCAGTTCAGAGTGGGGAGGGCGGCTCCATGGCCTCTCCTCTCCACTTTGTCTTTGGTTTGTCTGCAGAGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| 3UTR GCA 90 bp | GTTCCCTCCCTTTCAGGGTCAAAATGGCTCCTAGTACACTTGTTCTaGTGTGCTGTAACAATAAAAGCCTGTTTACGCTCTGCTGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: VPSLSGSKWLLVHLF*CAVTIKACLRSAVL Trigger: GAGGACAGCAGAGCGTAAACAGGCTTTTATTGTTACAGCACAGCAGAACAAGTGTACTAGGAGCCATTTTGACCCTGAAAGGGAGGGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCGCCCTCCCCACTCTGAACTGGGACAACGTCAGGGTCAGCCTTCGGCTTCCCTTTCAGGGTCAAAATaGCTCCTAGTACACTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: SRPPHSELGQRQGQPSASLSGSK*LLVHLF Trigger: GAACAAGTGTACTAGGAGCCATTTTGACCCTGAAAG...GGAAGCCGAAGGCTGACCCTGACGTTGTCCCAGTTCAGAGTGGGGAGGGCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCTTCGGCTTCCGGCAGCAGAAGGCTCTGCAGAAACAGTTCCCTCCCTTTCAACACTTGTTCTGCTGTaGTGTAACAATAAAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SLRLPAAEGSAETVPSLSTLVLL*CNNKSL Trigger: CAGGCTTTTATTGTTACAGCACAGCAGAACAAGTGT...TGAAAGGGAGGGAACTGTTTCTGCAGAGCCTTCTGCTGCCGGAAGCCGAAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| 3UTR CAA 90 bp | GAAACAGTTCCCTCCCTTTCAGGGTCAAAATGGCTCCTAGTACACTaGTTCTGCTGTGCTGTAACAATAAAAGCCTGTTTACGCTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: ETVPSLSGSKWLLVH*FCCAVTIKACLRSA Trigger: AGCAGAGCGTAAACAGGCTTTTATTGTTACAGCACAGCAGAACAAGTGTACTAGGAGCCATTTTGACCCTGAAAGGGAGGGAACTGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| 3UTR CCA 72 bp | AGGAGAGGCCATGGAGCCGCCCTCCCCACTCTGAACTaGGACAACGTCAGGGTCAGCCTTCGGCTTCCGGCA | + |
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Preference number: 3 (lower is better) Translates to: RRGHGAALPTLN*DNVRVSLRLPA Trigger: TGCCGGAAGCCGAAGGCTGACCCTGACGTTGTCCCAGTTCAGAGTGGGGAGGGCGGCTCCATGGCCTCTCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| 3UTR GCA 72 bp | CAGGGTCAGCCTTCGGCTTCCGGCAGCAGAAGGCTCTaGAGAAACAGTTCCCTCCCTTTCAGGGTCAAAATG | + |
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Preference number: 3 (lower is better) Translates to: QGQPSASGSRRL*RNSSLPFRVKM Trigger: CATTTTGACCCTGAAAGGGAGGGAACTGTTTCTGCAGAGCCTTCTGCTGCCGGAAGCCGAAGGCTGACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| 3UTR CCA 72 bp | CAGACAAACCAAAGACAAAGTGGAGAGGAGAGGCCATaGAGCCGCCCTCCCCACTCTGAACTGGGACAACGT | + |
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Preference number: 3 (lower is better) Translates to: QTNQRQSGEERP*SRPPHSELGQR Trigger: ACGTTGTCCCAGTTCAGAGTGGGGAGGGCGGCTCCATGGCCTCTCCTCTCCACTTTGTCTTTGGTTTGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| 3UTR GCA 72 bp | CTGCTGTGCTGTAACAATAAAAGCCTGTTTACGCTCTaGTGTCCTCTCGCCGCACAGTTGCTGTCGAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: LLCCNNKSLFTL*CPLAAQLLSRP Trigger: AGGCCTCGACAGCAACTGTGCGGCGAGAGGACAGCAGAGCGTAAACAGGCTTTTATTGTTACAGCACAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| 3UTR GCA 72 bp | AGGGTCAAAATGGCTCCTAGTACACTTGTTCTGCTGTaGTGTAACAATAAAAGCCTGTTTACGCTCTGCTGT | + |
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Preference number: 3 (lower is better) Translates to: RVKMAPSTLVLL*CNNKSLFTLCC Trigger: ACAGCAGAGCGTAAACAGGCTTTTATTGTTACAGCACAGCAGAACAAGTGTACTAGGAGCCATTTTGACCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR GCA 90 bp | CATGGAGCCGCCCTCCCCACTCTGAACTGGGACAACGTCAGGGTCAGCCTTCGGGGTCCTCCAGGCGCCTaGGGGGAGCGCGAGACGCAG | + |
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Preference number: 4 (lower is better) Translates to: HGAALPTLNWDNVRVSLRGPPGA*GERETQ Trigger: CTGCGTCTCGCGCTCCCCGCAGGCGCCTGGAGGACC...CCGAAGGCTGACCCTGACGTTGTCCCAGTTCAGAGTGGGGAGGGCGGCTCCATG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR GCA 90 bp | CATGGAGCCGCCCTCCCCACTCTGAACTGGGACAACGTCAGGGTCAGCCTTCGGGAGAGCTGGTCTTTGTaGTCAGAGGCGCGGCCCTTA | + |
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Preference number: 4 (lower is better) Translates to: HGAALPTLNWDNVRVSLRESWSL*SEARPL Trigger: TAAGGGCCGCGCCTCTGAGCACAAAGACCAGCTCTC...CCGAAGGCTGACCCTGACGTTGTCCCAGTTCAGAGTGGGGAGGGCGGCTCCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR CCA 90 bp | GACAAAGTGGAGAGGAGAGGCCATGGAGCCGCCCTCCCCACTCTGAACTGGGACGCTTCCTGCTCTCCTTaGGTGGTGGCTACAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: DKVERRGHGAALPTLNWDASCSP*VVATAA Trigger: AGCAGCTGTAGCCACCACCCAAGGAGAGCAGGAAGC...GTCCCAGTTCAGAGTGGGGAGGGCGGCTCCATGGCCTCTCCTCTCCACTTTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR GCA 90 bp | CAAAGACAAAGTGGAGAGGAGAGGCCATGGAGCCGCCCTCCCCACTCTGAACTGTGGTGCCTGGAGCCCTaGCTCCACCTTTCCACCATG | + |
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Preference number: 4 (lower is better) Translates to: QRQSGEERPWSRPPHSELWCLEP*LHLSTM Trigger: CATGGTGGAAAGGTGGAGGCAGGGCTCCAGGCACCA...CAGTTCAGAGTGGGGAGGGCGGCTCCATGGCCTCTCCTCTCCACTTTGTCTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR CCA 90 bp | GGCCATGGAGCCGCCCTCCCCACTCTGAACTGGGACAACGTCAGGGTCAGCCTTTCCTTGGTGAGCTTCTaGGAGCCTAGGTACTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: GHGAALPTLNWDNVRVSLSLVSF*EPRYSS Trigger: AGAGGAGTACCTAGGCTCCCAGAAGCTCACCAAGGA...AAGGCTGACCCTGACGTTGTCCCAGTTCAGAGTGGGGAGGGCGGCTCCATGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR TCA 90 bp | AGACAAAGTGGAGAGGAGAGGCCATGGAGCCGCCCTCCCCACTCTGAACTGGGAGGGTACTGGGGGAGGTaGACTTGCAGTTTCTCACAT | + |
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Preference number: 4 (lower is better) Translates to: RQSGEERPWSRPPHSELGGYWGR*TCSFSH Trigger: ATGTGAGAAACTGCAAGTTCACCTCCCCCAGTACCC...TCCCAGTTCAGAGTGGGGAGGGCGGCTCCATGGCCTCTCCTCTCCACTTTGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR TCA 90 bp | CACTCTGAACTGGGACAACGTCAGGGTCAGCCTTCGGCTTCCGGCAGCAGAAGGTCTTTCAGTCCTTGGTaGGCTTCTGGGAGCCTAGGT | + |
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Preference number: 4 (lower is better) Translates to: HSELGQRQGQPSASGSRRSFSPW*ASGSLG Trigger: ACCTAGGCTCCCAGAAGCTCACCAAGGACTGAAAGA...CCTTCTGCTGCCGGAAGCCGAAGGCTGACCCTGACGTTGTCCCAGTTCAGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR TCA 90 bp | GACAAAGTGGAGAGGAGAGGCCATGGAGCCGCCCTCCCCACTCTGAACTGGGACTGTGTCTCCATCCTCTaGATCGCTGTCACCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: DKVERRGHGAALPTLNWDCVSIL*IAVTFF Trigger: GAAGAAGGTGACAGCGATTCAGAGGATGGAGACACA...GTCCCAGTTCAGAGTGGGGAGGGCGGCTCCATGGCCTCTCCTCTCCACTTTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR GCA 90 bp | CAAAGACAAAGTGGAGAGGAGAGGCCATGGAGCCGCCCTCCCCACTCTGAACTGCTGCAACCTGGAACCTaGAAGTCTCAGCAGCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: QRQSGEERPWSRPPHSELLQPGT*KSQQLP Trigger: AGGAAGCTGCTGAGACTTGCAGGTTCCAGGTTGCAG...CAGTTCAGAGTGGGGAGGGCGGCTCCATGGCCTCTCCTCTCCACTTTGTCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR GCA 90 bp | AAAGACAAAGTGGAGAGGAGAGGCCATGGAGCCGCCCTCCCCACTCTGAACTGGAAGCTGCTGATATGCTaGAGGACAGCTGCAGACACC | + |
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Preference number: 4 (lower is better) Translates to: KDKVERRGHGAALPTLNWKLLIC*RTAADT Trigger: GGTGTCTGCAGCTGTCCTGCAGCATATCAGCAGCTT...CCAGTTCAGAGTGGGGAGGGCGGCTCCATGGCCTCTCCTCTCCACTTTGTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR GCA 90 bp | CAACGTCAGGGTCAGCCTTCGGCTTCCGGCAGCAGAAGGCTCTGCAGAAACAGTACCAAGCTGCTGATATaGTGCAGGACAGCTGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: QRQGQPSASGSRRLCRNSTKLLI*CRTAAD Trigger: GTCTGCAGCTGTCCTGCAGCATATCAGCAGCTTGGT...ACTGTTTCTGCAGAGCCTTCTGCTGCCGGAAGCCGAAGGCTGACCCTGACGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR CCA 90 bp | ACTGCAGTGCTCTGCAGACAAACCAAAGACAAAGTGGAGAGGAGAGGCCATGGAAGCCTGGGACTAAGGTaGTGCCTGGAGCCCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: TAVLCRQTKDKVERRGHGSLGLR*CLEPCL Trigger: GAGGCAGGGCTCCAGGCACCACCTTAGTCCCAGGCT...TCCATGGCCTCTCCTCTCCACTTTGTCTTTGGTTTGTCTGCAGAGCACTGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR TCA 90 bp | CTCTGCAGACAAACCAAAGACAAAGTGGAGAGGAGAGGCCATGGAGCCGCCCTCAAGGAACCAAGCTGCTaGTATGCTGCAGGACAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LCRQTKDKVERRGHGAALKEPSC*YAAGQL Trigger: CAGCTGTCCTGCAGCATATCAGCAGCTTGGTTCCTT...GAGGGCGGCTCCATGGCCTCTCCTCTCCACTTTGTCTTTGGTTTGTCTGCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR TCA 90 bp | AAAAGCCTGTTTACGCTCTGCTGTCCTCTCGCCGCACAGTTGCTGTCGAGGCCTCCACCTTCCGCCTTTTaGTCTCTGGGAAGTTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: KSLFTLCCPLAAQLLSRPPPSAF*SLGSSG Trigger: ACCTGAACTTCCCAGAGATCAAAAGGCGGAAGGTGG...AGGCCTCGACAGCAACTGTGCGGCGAGAGGACAGCAGAGCGTAAACAGGCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR GCA 90 bp | TCCCTCCCTTTCAGGGTCAAAATGGCTCCTAGTACACTTGTTCTGCTGTGCTGTCTGGGACTAAGGTGGTaGCTGGAGCCCTGCCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: SLPFRVKMAPSTLVLLCCLGLRW*LEPCLH Trigger: GTGGAGGCAGGGCTCCAGGCACCACCTTAGTCCCAG...ACAGCACAGCAGAACAAGTGTACTAGGAGCCATTTTGACCCTGAAAGGGAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR TCA 90 bp | CAACGTCAGGGTCAGCCTTCGGCTTCCGGCAGCAGAAGGCTCTGCAGAAACAGTAGATCACAGAGAAGTTaGTGGGCTTGGAACTCATGC | + |
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Preference number: 4 (lower is better) Translates to: QRQGQPSASGSRRLCRNSRSQRS*WAWNSC Trigger: GCATGAGTTCCAAGCCCATCAACTTCTCTGTGATCT...ACTGTTTCTGCAGAGCCTTCTGCTGCCGGAAGCCGAAGGCTGACCCTGACGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR GCA 90 bp | TCCCTCCCTTTCAGGGTCAAAATGGCTCCTAGTACACTTGTTCTGCTGTGCTGTCAGGCTCATTCTTCTTaGTCCTCAGCCCTCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: SLPFRVKMAPSTLVLLCCQAHSS*SSALWA Trigger: TGCCCAGAGGGCTGAGGAGCAAGAAGAATGAGCCTG...ACAGCACAGCAGAACAAGTGTACTAGGAGCCATTTTGACCCTGAAAGGGAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR GCA 90 bp | CAACGTCAGGGTCAGCCTTCGGCTTCCGGCAGCAGAAGGCTCTGCAGAAACAGTCACGTACACAATGCATaGGCAATGGATAAAATCGAG | + |
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Preference number: 4 (lower is better) Translates to: QRQGQPSASGSRRLCRNSHVHNA*AMDKIE Trigger: CTCGATTTTATCCATTGCGCATGCATTGTGTACGTG...ACTGTTTCTGCAGAGCCTTCTGCTGCCGGAAGCCGAAGGCTGACCCTGACGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR GCA 90 bp | GCAGAAACAGTTCCCTCCCTTTCAGGGTCAAAATGGCTCCTAGTACACTTGTTCACTCTGGGAAAGCGATaGTGTGGGCCTGGCTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: AETVPSLSGSKWLLVHLFTLGKR*CGPGCA Trigger: TGCACAGCCAGGCCCACAGCATCGCTTTCCCAGAGT...GAACAAGTGTACTAGGAGCCATTTTGACCCTGAAAGGGAGGGAACTGTTTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR CCA 90 bp | CAGCAGAAGGCTCTGCAGAAACAGTTCCCTCCCTTTCAGGGTCAAAATGGCTCCGCCTGTACAACTTCATaGAACAGCCTGGGACTAAGG | + |
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Preference number: 4 (lower is better) Translates to: QQKALQKQFPPFQGQNGSACTTS*NSLGLR Trigger: CCTTAGTCCCAGGCTGTTCCATGAAGTTGTACAGGC...GGAGCCATTTTGACCCTGAAAGGGAGGGAACTGTTTCTGCAGAGCCTTCTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR CCA 90 bp | AAAGACAAAGTGGAGAGGAGAGGCCATGGAGCCGCCCTCCCCACTCTGAACTGGCCTATTGCTATCCTTTaGTGTCTTTCCAAACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: KDKVERRGHGAALPTLNWPIAIL*CLSKQQ Trigger: CTGCTGTTTGGAAAGACACCAAAGGATAGCAATAGG...CCAGTTCAGAGTGGGGAGGGCGGCTCCATGGCCTCTCCTCTCCACTTTGTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR GCA 90 bp | GCAGCAGAAGGCTCTGCAGAAACAGTTCCCTCCCTTTCAGGGTCAAAATGGCTCTGTTGTGCATTCTCTTaGACTTTCTCCAGCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: AAEGSAETVPSLSGSKWLCCAFS*TFSSSW Trigger: CCAGCTGCTGGAGAAAGTGCAAGAGAATGCACAACA...GAGCCATTTTGACCCTGAAAGGGAGGGAACTGTTTCTGCAGAGCCTTCTGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR GCA 90 bp | GTCAGGGTCAGCCTTCGGCTTCCGGCAGCAGAAGGCTCTGCAGAAACAGTTCCCACTTTGGATATGTTGTaGATTCTCTTGCACTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: VRVSLRLPAAEGSAETVPTLDML*ILLHFL Trigger: GAGAAAGTGCAAGAGAATGCACAACATATCCAAAGT...GGGAACTGTTTCTGCAGAGCCTTCTGCTGCCGGAAGCCGAAGGCTGACCCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR CCA 90 bp | CCTAGTACACTTGTTCTGCTGTGCTGTAACAATAAAAGCCTGTTTACGCTCTGCTGCTCCTCAGCCCTCTaGGCAACGCGTCACTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: PSTLVLLCCNNKSLFTLCCSSAL*ATRHCP Trigger: AGGACAGTGACGCGTTGCCCAGAGGGCTGAGGAGCA...GCAGAGCGTAAACAGGCTTTTATTGTTACAGCACAGCAGAACAAGTGTACTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR GCA 90 bp | GTAACTGCAGTGCTCTGCAGACAAACCAAAGACAAAGTGGAGAGGAGAGGCCATATGGCAGCAGCCTATTaGTATCCTTTGGTGTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: VTAVLCRQTKDKVERRGHMAAAY*YPLVSF Trigger: GAAAGACACCAAAGGATAGCAATAGGCTGCTGCCAT...ATGGCCTCTCCTCTCCACTTTGTCTTTGGTTTGTCTGCAGAGCACTGCAGTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR GCA 90 bp | AGTACACTTGTTCTGCTGTGCTGTAACAATAAAAGCCTGTTTACGCTCTGCTGTCTGTGGGCCTGGCTGTaGAGGTATTCCAGAGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: STLVLLCCNNKSLFTLCCLWAWL*RYSRVR Trigger: CCTTACTCTGGAATACCTGCACAGCCAGGCCCACAG...ACAGCAGAGCGTAAACAGGCTTTTATTGTTACAGCACAGCAGAACAAGTGTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR GCA 90 bp | TGGGTTTATCTTCTAGAGGTAACTGCAGTGCTCTGCAGACAAACCAAAGACAAATCTCAAAGAAGTCGGTaGTGTCCTCGCCCTCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: WVYLLEVTAVLCRQTKDKSQRSR*CPRPQN Trigger: GTTCTGAGGGCGAGGACAGCACCGACTTCTTTGAGA...TTTGTCTTTGGTTTGTCTGCAGAGCACTGCAGTTACCTCTAGAAGATAAACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR CCA 90 bp | TGGGTTTATCTTCTAGAGGTAACTGCAGTGCTCTGCAGACAAACCAAAGACAAAGCTGATAGGAGACGCTaGGGTCCAAGGCAAGCATTT | + |
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Preference number: 4 (lower is better) Translates to: WVYLLEVTAVLCRQTKDKADRRR*GPRQAF Trigger: AAATGCTTGCCTTGGACCCCAGCGTCTCCTATCAGC...TTTGTCTTTGGTTTGTCTGCAGAGCACTGCAGTTACCTCTAGAAGATAAACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| 3UTR CAA 72 bp | CCCTCCCTTTCAGGGTCAAAATGGCTCCTAGTACACTaGTTCTGCTGTGCTGTAACAATAAAAGCCTGTTTA | + |
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Preference number: 4 (lower is better) Translates to: PSLSGSKWLLVH*FCCAVTIKACL Trigger: TAAACAGGCTTTTATTGTTACAGCACAGCAGAACAAGTGTACTAGGAGCCATTTTGACCCTGAAAGGGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS GCA 90 bp | GAGTGGGGTCCCCTCTTCACGAACCTGCTTCTCCCACGCATCCACTaGCATCTGGTCAGACACGCTGAAGGTCGCGCTCTGTCGAAGACT | + |
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Preference number: 5 (lower is better) Translates to: EWGPLFTNLLLPRIH*HLVRHAEGRALSKT Trigger: AGTCTTCGACAGAGCGCGACCTTCAGCGTGTCTGACCAGATGGCAGTGGATGCGTGGGAGAAGCAGGTTCGTGAAGAGGGGACCCCACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS GCA 90 bp | AGGACAGCTGCAGACACCGTGGCTTCCGCTAGACAGGCTACCAGCTaGACCACCGCACTTAGGTATGTCTTGACATCCACACGGAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: RTAADTVASARQATS*TTALRYVLTSTRSF Trigger: GAAGCTCCGTGTGGATGTCAAGACATACCTAAGTGCGGTGGTGCAGCTGGTAGCCTGTCTAGCGGAAGCCACGGTGTCTGCAGCTGTCCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS GCA 90 bp | GTAGGCAACACCAACTCTGGGAAAGCGATGCTGTGGGCCTGGCTGTaGAGGTATTCCAGAGTAAGGTCACACAGCTGTTCCAGCAGCCCG | + |
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Preference number: 5 (lower is better) Translates to: VGNTNSGKAMLWAWL*RYSRVRSHSCSSSP Trigger: CGGGCTGCTGGAACAGCTGTGTGACCTTACTCTGGAATACCTGCACAGCCAGGCCCACAGCATCGCTTTCCCAGAGTTGGTGTTGCCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR CAA 90 bp | CTCTGCAGACAAACCAAAGACAAAGTGGAGAGGAGAGGCCATGGAGCCGCCCTCCGACCTGGCCGCCTATaGAAGTCCACCTGCTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: LCRQTKDKVERRGHGAALRPGRL*KSTCWK Trigger: TTTCCAGCAGGTGGACTTCAATAGGCGGCCAGGTCG...GAGGGCGGCTCCATGGCCTCTCCTCTCCACTTTGTCTTTGGTTTGTCTGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS CCA 90 bp | GTCCCCTCTTCACGAACCTGCTTCTCCCACGCATCCACTGCCATCTaGTCAGACACGCTGAAGGTCGCGCTCTGTCGAAGACTTTGGATA | + |
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Preference number: 5 (lower is better) Translates to: VPSSRTCFSHASTAI*SDTLKVALCRRLWI Trigger: TATCCAAAGTCTTCGACAGAGCGCGACCTTCAGCGTGTCTGACCAGATGGCAGTGGATGCGTGGGAGAAGCAGGTTCGTGAAGAGGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR CAA 90 bp | GCAGCAGAAGGCTCTGCAGAAACAGTTCCCTCCCTTTCAGGGTCAAAATGGCTCAGCTTCCTGCTCTCCTaGGGTGGTGGCTACAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: AAEGSAETVPSLSGSKWLSFLLS*GGGYSC Trigger: GCAGCTGTAGCCACCACCCAAGGAGAGCAGGAAGCT...GAGCCATTTTGACCCTGAAAGGGAGGGAACTGTTTCTGCAGAGCCTTCTGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS CCA 90 bp | GGCTTGGAACTCATGCGACCTGGCCGCCTATTGAAGTCCACCTGCTaGAAAATCTCGAGAATGAAGGGCAGGACAGGTATGAAGGTGCCG | + |
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Preference number: 5 (lower is better) Translates to: GLELMRPGRLLKSTC*KISRMKGRTGMKVP Trigger: CGGCACCTTCATACCTGTCCTGCCCTTCATTCTCGAGATTTTCCAGCAGGTGGACTTCAATAGGCGGCCAGGTCGCATGAGTTCCAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR CAA 90 bp | AAAAGCCTGTTTACGCTCTGCTGTCCTCTCGCCGCACAGTTGCTGTCGAGGCCTAAAGTAACCAGAGCATaGAACACAGCACTATCTGCA | + |
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Preference number: 5 (lower is better) Translates to: KSLFTLCCPLAAQLLSRPKVTRA*NTALSA Trigger: TGCAGATAGTGCTGTGTTCAATGCTCTGGTTACTTT...AGGCCTCGACAGCAACTGTGCGGCGAGAGGACAGCAGAGCGTAAACAGGCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR CAA 90 bp | TCCCTCCCTTTCAGGGTCAAAATGGCTCCTAGTACACTTGTTCTGCTGTGCTGTATGTTGTGCATTCTCTaGCACTTTCTCCAGCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: SLPFRVKMAPSTLVLLCCMLCIL*HFLQQL Trigger: CAGCTGCTGGAGAAAGTGCAAGAGAATGCACAACAT...ACAGCACAGCAGAACAAGTGTACTAGGAGCCATTTTGACCCTGAAAGGGAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR CAA 90 bp | GCAGAAACAGTTCCCTCCCTTTCAGGGTCAAAATGGCTCCTAGTACACTTGTTCATCTTCTTTCAGTCCTaGGTGAGCTTCTGGGAGCCT | + |
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Preference number: 5 (lower is better) Translates to: AETVPSLSGSKWLLVHLFIFFQS*VSFWEP Trigger: AGGCTCCCAGAAGCTCACCAAGGACTGAAAGAAGAT...GAACAAGTGTACTAGGAGCCATTTTGACCCTGAAAGGGAGGGAACTGTTTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS CCA 90 bp | TTTATCTTCTTCTTCCTGATCTTCTTTCAGTCCTTGGTGAGCTTCTaGGAGCCTAGGTACTCCTCTCTCAAAGAAGTCGGTGCTGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: FIFFFLIFFQSLVSF*EPRYSSLKEVGAVL Trigger: GAGGACAGCACCGACTTCTTTGAGAGAGGAGTACCTAGGCTCCCAGAAGCTCACCAAGGACTGAAAGAAGATCAGGAAGAAGAAGATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR CAA 90 bp | GAAACAGTTCCCTCCCTTTCAGGGTCAAAATGGCTCCTAGTACACTTGTTCTGCGCCTATTGCTATCCTTaGGTGTCTTTCCAAACAGCA | + |
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Preference number: 5 (lower is better) Translates to: ETVPSLSGSKWLLVHLFCAYCYP*VSFQTA Trigger: TGCTGTTTGGAAAGACACCAAAGGATAGCAATAGGC...GCAGAACAAGTGTACTAGGAGCCATTTTGACCCTGAAAGGGAGGGAACTGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS-3UTR CAA 90 bp | TGGGTTTATCTTCTAGAGGTAACTGCAGTGCTCTGCAGACAAACCAAAGACAAATGCACATACTGCCAGTaGTACACAGACTGGTGTGTC | + |
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Preference number: 5 (lower is better) Translates to: WVYLLEVTAVLCRQTKDKCTYCQ*YTDWCV Trigger: GACACACCAGTCTGTGTACAACTGGCAGTATGTGCA...TTTGTCTTTGGTTTGTCTGCAGAGCACTGCAGTTACCTCTAGAAGATAAACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS CCA 72 bp | CGGGTACAGGCTCATTCTTCTTGCTCCTCAGCCCTCTaGGCAACGCGTCACTGTCCTCTCCTCCGTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: RVQAHSSCSSAL*ATRHCPLLRLP Trigger: AGGAAGACGGAGGAGAGGACAGTGACGCGTTGCCCAGAGGGCTGAGGAGCAAGAAGAATGAGCCTGTACCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS CCA 72 bp | TCACGAACCTGCTTCTCCCACGCATCCACTGCCATCTaGTCAGACACGCTGAAGGTCGCGCTCTGTCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: SRTCFSHASTAI*SDTLKVALCRR Trigger: TCTTCGACAGAGCGCGACCTTCAGCGTGTCTGACCAGATGGCAGTGGATGCGTGGGAGAAGCAGGTTCGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS GCA 72 bp | ACCAACTCTGGGAAAGCGATGCTGTGGGCCTGGCTGTaGAGGTATTCCAGAGTAAGGTCACACAGCTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: TNSGKAMLWAWL*RYSRVRSHSCS Trigger: GGAACAGCTGTGTGACCTTACTCTGGAATACCTGCACAGCCAGGCCCACAGCATCGCTTTCCCAGAGTTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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| CDS CAA 72 bp | GTCAGACACGCTGAAGGTCGCGCTCTGTCGAAGACTTaGGATATGTTGTGCATTCTCTTGCACTTTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: VRHAEGRALSKT*DMLCILLHFLQ Trigger: CTGGAGAAAGTGCAAGAGAATGCACAACATATCCAAAGTCTTCGACAGAGCGCGACCTTCAGCGTGTCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179543.8 |
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