Pregenerated sensors for NOA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036285Ensembl transcript IDs: ENSMUST00000047860.9
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCAGCCCGCAGCTTCTGCTaGAGCCGCTCCTCCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASARSFC*SRSSRC Trigger: GCAGCGGGAGGAGCGGCTTCAGCAGAAGCTGCGGGC...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR GCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCACCGGGATGCTGGCAGTaGAGCTCGGCTCCGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASPGCWQ*SSAPQP Trigger: GGGCTGCGGAGCCGAGCTGCACTGCCAGCATCCCGG...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR CCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCAGGCAGGCCGGGATGCTaGCAGTGCAGCTCGGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASGRPGC*QCSSAP Trigger: CGGAGCCGAGCTGCACTGCCAGCATCCCGGCCTGCC...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR CCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCAAGCAGCCAGCAGCGTTaGCACACGGTCCGCGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASSSQQR*HTVRAG Trigger: CCCGGCGCGGACCGTGTGCCAACGCTGCTGGCTGCT...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR GCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCACGAGCCCGGCGCGGATaGAATCGTCCCACAGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASRARRG*NRPTAA Trigger: AGCGGCTGTGGGACGATTGCATCCGCGCCGGGCTCG...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR CCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCAAGTCCTCGGTCGCCGTaGAGCTCGGGGGAACCCGAC | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASSPRSP*SSGEPD Trigger: GTCGGGTTCCCCCGAGCTCCACGGCGACCGAGGACT...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR CCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCATGGTGGCCCGGTCGATaGCTTCGGAGCCCTTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASWWPGR*LRSPWR Trigger: CCGCCAAGGGCTCCGAAGCCATCGACCGGGCCACCA...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR CCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCAGCCAGGGGGAGATGGTaGCCCGGTCGATGGCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASARGRW*PGRWLR Trigger: CCGAAGCCATCGACCGGGCCACCATCTCCCCCTGGC...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR GCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCAAGGGCTCGTCCGTGGTaGACCAGCAGCCAGCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASRARPW*TSSQQR Trigger: ACGCTGCTGGCTGCTGGTGCACCACGGACGAGCCCT...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR GCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCAGGGACGCCGCAGCGCTaGGCTCACAAGCTCCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASGTPQR*AHKLQV Trigger: TACCTGGAGCTTGTGAGCGCAGCGCTGCGGCGTCCC...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR GCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCATCCTGCTGCAGCTGCTaGAACTCCCGCAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASSCCSC*NSRSSC Trigger: GCAGGAGCTGCGGGAGTTGCAGCAGCTGCAGCAGGA...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR TCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCATGTTCCCCAGCACGATaGGTTGCTTGGGGCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASCSPAR*VAWGPP Trigger: TGGTGGGCCCCAAGCAACTCATCGTGCTGGGGAACA...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR TCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCAGTCCCTTCAGGTGTGTaGCCTCGGAGATGCAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASVPSGV*PRRCSV Trigger: CACGCTGCATCTCCGAGGTCACACACCTGAAGGGAC...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR GCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCATTCTCCTGCTGCAGCTaGTGCAACTCCCGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASFSCCS*CNSRSS Trigger: GGAGCTGCGGGAGTTGCAGCAGCTGCAGCAGGAGAA...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR GCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCACGTTCCTTCTCCTGCTaGAGCTGCTGCAACTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASRSFSC*SCCNSR Trigger: GCGGGAGTTGCAGCAGCTGCAGCAGGAGAAGGAACG...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR GCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCACCCAGCACGATGAGTTaGTTGGGGCCCACCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASPSTMS*LGPTSL Trigger: CAAGCTGGTGGGCCCCAAGCAACTCATCGTGCTGGG...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR CCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCACCCGGCAGGGTACTGTaGTCCTTGATGACCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASPGRVL*SLMTRS Trigger: GCTCCTGGTCATCAAGGACCACAGTACCCTGCCGGG...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR TCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCAACAAGCTCCAGGTACTaGTCGCGGCTTACCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASTSSRY*SRLTCR Trigger: CCTGCAGGTAAGCCGCGATCAGTACCTGGAGCTTGT...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR GCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCACGGAGCCCTTGGCGGTaGAGTAATCAGACTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASRSPWR*SNQTPG Trigger: TCCTGGAGTCTGATTACTGCACCGCCAAGGGCTCCG...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR GCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCAGGAGGTTTAATGTGGTaGCTGGCCAGGGGGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASGGLMW*LARGRW Trigger: CCATCTCCCCCTGGCCAGGCACCACATTAAACCTCC...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR GCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCATCTCGTTCCTTCTCCTaGTGCAGCTGCTGCAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASSRSFS*CSCCNS Trigger: GGAGTTGCAGCAGCTGCAGCAGGAGAAGGAACGAGA...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR GCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCATGCTTCTTCAGGTTGTaGACCAGGGACGGAGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASCFFRL*TRDGGF Trigger: GAAGCCTCCGTCCCTGGTGCACAACCTGAAGAAGCA...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR CCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCATGGCTTCGGAGCCCTTaGCGGTGCAGTAATCAGACT | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASWLRSP*RCSNQT Trigger: AGTCTGATTACTGCACCGCCAAGGGCTCCGAAGCCA...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR CCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCATCAGGAGGTTTAATGTaGTGCCTGGCCAGGGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASSGGLM*CLARGR Trigger: TCTCCCCCTGGCCAGGCACCACATTAAACCTCCTGA...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR TCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCATGGAAGCCACAACTGTaGACCAGGCTGACTGATTTC | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASWKPQL*TRLTDF Trigger: GAAATCAGTCAGCCTGGTTCACAGTTGTGGCTTCCA...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR TCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCACTGGAGGACGGATTCTaGTTCTTTATCTCCTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASLEDGF*FFISSS Trigger: ACTGGAGGAGATAAAGAATCAGAATCCGTCCTCCAG...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR CCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCAACAAGAGGGGGAAACTaGGCCATTCGTTCTTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASTRGGN*AIRSFP Trigger: TGGAAAAGAACGAATGGCCCAGTTTCCCCCTCTTGT...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR CCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCAGGGACGGAGGCTTCTTaGTTTTATAGGCCACACTTT | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASGTEAS*FYRPHF Trigger: AAAGTGTGGCCTATAAAACCAAGAAGCCTCCGTCCC...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR TCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCACTGCAGAGGAGAACTTaGTATCAGCTACTGCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASLQRRT*YQLLLQ Trigger: TTGAAGCAGTAGCTGATATCAAGTTCTCCTCTGCAG...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR GCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCATACTGCAACCCAACCTaGAGAGGAGAACTTGATATC | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASYCNPT*RGELDI Trigger: GATATCAAGTTCTCCTCTGCAGGTTGGGTTGCAGTA...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR CCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCACTTCGTCCTGTTCTCTaGAGTACGAGAATGTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASLRPVL*STRMFF Trigger: GAAGAACATTCTCGTACTCCAGAGAACAGGACGAAG...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR CCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCAGCACACAGACACAACTaGTTCACTTCCCATGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASAHRHN*FTSHVK Trigger: TTTGACATGGGAAGTGAACCAGTTGTGTCTGTGTGC...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR TCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCAGCCTTCTTTGTCTTTTaGACATTCTGTAAGGAGTCG | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASAFFVF*TFCKES Trigger: CGACTCCTTACAGAATGTTCAAAAGACAAAGAAGGC...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR TCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCATTGGTCGCATCTTCTTaGAGCCTTCTTTGTCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASLVASS*SLLCLL Trigger: CAAAAGACAAAGAAGGCTTCAAGAAGATGCGACCAA...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR GCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCATTTGCTTGGTGCTTTTaGACACAGACACAACTGGTT | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASFAWCF*TQTQLV Trigger: AACCAGTTGTGTCTGTGTGCAAAAGCACCAAGCAAA...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR TCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCAGCTTTTTCAGTTGATTaGGCTGACTTTGTTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASAFSVD*ADFVLP Trigger: AGGAAGAACAAAGTCAGCTCAATCAACTGAAAAAGC...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR TCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCATCCAAGGAAGTAATATaGACAGGAAGGAAGTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASSKEVI*TGRKLE Trigger: TTCCAACTTCCTTCCTGTTCATATTACTTCCTTGGA...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR GCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCACTTGATATCAGCTACTaGTTCAAATTTTCCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASLDISY*FKFSTS Trigger: GGAGGTGGAAAATTTGAAGCAGTAGCTGATATCAAG...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS-3UTR CCA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCATTAGCTCTATTTGCTTaGTGCTTTTGCACACAGACA | + |
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Preference number: 4 (lower is better) Translates to: VHFTHFSTHCPVGPMSASLALFA*CFCTQT Trigger: TGTCTGTGTGCAAAAGCACCAAGCAAATAGAGCTAA...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS CCA 90 bp | TGCAGGCGCAGGGCTCGTCCGTGGTGCACCAGCAGCCAGCAGCGTTaGCACACGGTCCGCGCCGGGCCGCCTTCCGCCTGGGCAGCGTCG | + |
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Preference number: 5 (lower is better) Translates to: CRRRARPWCTSSQQR*HTVRAGPPSAWAAS Trigger: CGACGCTGCCCAGGCGGAAGGCGGCCCGGCGCGGACCGTGTGCCAACGCTGCTGGCTGCTGGTGCACCACGGACGAGCCCTGCGCCTGCA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS TCA 90 bp | GCCGGCCCGGGACGCCGCAGCGCTGCGCTCACAAGCTCCAGGTACTaGTCGCGGCTTACCTGCAGGCGCAGGGCTCGTCCGTGGTGCACC | + |
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Preference number: 5 (lower is better) Translates to: AGPGRRSAALTSSRY*SRLTCRRRARPWCT Trigger: GGTGCACCACGGACGAGCCCTGCGCCTGCAGGTAAGCCGCGATCAGTACCTGGAGCTTGTGAGCGCAGCGCTGCGGCGTCCCGGGCCGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS CCA 90 bp | TCCGCAGCCCGAGCAGTAGATGCCGCTGGGCGGCACCGAGGCGTCTaGAAACTCCGGGACAGGCAGCGTCCGGAAGCCCGCCCGCAGCTT | + |
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Preference number: 5 (lower is better) Translates to: SAARAVDAAGRHRGV*KLRDRQRPEARPQL Trigger: AAGCTGCGGGCGGGCTTCCGGACGCTGCCTGTCCCGGAGTTTCCAGACGCCTCGGTGCCGCCCAGCGGCATCTACTGCTCGGGCTGCGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS GCA 90 bp | CGGGATGCTGGCAGTGCAGCTCGGCTCCGCAGCCCGAGCAGTAGATaGCGCTGGGCGGCACCGAGGCGTCTGGAAACTCCGGGACAGGCA | + |
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Preference number: 5 (lower is better) Translates to: RDAGSAARLRSPSSR*RWAAPRRLETPGQA Trigger: TGCCTGTCCCGGAGTTTCCAGACGCCTCGGTGCCGCCCAGCGGCATCTACTGCTCGGGCTGCGGAGCCGAGCTGCACTGCCAGCATCCCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS GCA 90 bp | GACGTACTCCGGGAACAGAAAGCGTTCCTCCGTGTCCGGGCCTTCTaGATAGTCCTCGGTCGCCGTGGAGCTCGGGGGAACCCGACGGCC | + |
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Preference number: 5 (lower is better) Translates to: DVLREQKAFLRVRAF*IVLGRRGARGNPTA Trigger: GGCCGTCGGGTTCCCCCGAGCTCCACGGCGACCGAGGACTATGCAGAAGGCCCGGACACGGAGGAACGCTTTCTGTTCCCGGAGTACGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS CCA 90 bp | GGTTTAATGTGGTGCCTGGCCAGGGGGAGATGGTGGCCCGGTCGATaGCTTCGGAGCCCTTGGCGGTGCAGTAATCAGACTCCAGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: GLMWCLARGRWWPGR*LRSPWRCSNQTPGV Trigger: CACTCCTGGAGTCTGATTACTGCACCGCCAAGGGCTCCGAAGCCATCGACCGGGCCACCATCTCCCCCTGGCCAGGCACCACATTAAACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS GCA 90 bp | TCCTCCCGCTGCTGCAATCTCTCTCGTTCCTTCTCCTGCTGCAGCTaGTGCAACTCCCGCAGCTCCTGCAACTCCCGCACTTGTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSRCCNLSRSFSCCS*CNSRSSCNSRTCSS Trigger: GGAGGAACAAGTGCGGGAGTTGCAGGAGCTGCGGGAGTTGCAGCAGCTGCAGCAGGAGAAGGAACGAGAGAGATTGCAGCAGCGGGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS CCA 90 bp | CTGATTCTTTATCTCCTCCAGTGGCTCATCCCCGGCAGGGTACTGTaGTCCTTGATGACCAGGAGCCACCACGAGCCCGGCGCGGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: LILYLLQWLIPGRVL*SLMTRSHHEPGADA Trigger: TGCATCCGCGCCGGGCTCGTGGTGGCTCCTGGTCATCAAGGACCACAGTACCCTGCCGGGGATGAGCCACTGGAGGAGATAAAGAATCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS-3UTR CAA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCACAGCAGCCAGCAGCGTaGGCACACGGTCCGCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VHFTHFSTHCPVGPMSASQQPAA*AHGPRR Trigger: CCGGCGCGGACCGTGTGCCAACGCTGCTGGCTGCTG...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS-3UTR CAA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCATTGGGGCCCACCAGCTaGGGCAGGTCGGGCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VHFTHFSTHCPVGPMSASLGPTS*GRSGSR Trigger: CCTGCTGCCCGACCTGCCCAAGCTGGTGGGCCCCAA...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS TCA 90 bp | AGTCGCACGTCCTTGACTACCGTGCGGGACCTGGAGGACGGATTCTaGTTCTTTATCTCCTCCAGTGGCTCATCCCCGGCAGGGTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: SRTSLTTVRDLEDGF*FFISSSGSSPAGYC Trigger: ACAGTACCCTGCCGGGGATGAGCCACTGGAGGAGATAAAGAATCAGAATCCGTCCTCCAGGTCCCGCACGGTAGTCAAGGACGTGCGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS GCA 90 bp | CAGTCAGAGCAGTCCCTTCAGGTGTGTGACCTCGGAGATGCAGCGTaGCCTCAGAATAAGGTGTTACTGCAACCCAACCTGCAGAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QSEQSLQVCDLGDAA*PQNKVLLQPNLQRR Trigger: TCTCCTCTGCAGGTTGGGTTGCAGTAACACCTTATTCTGAGGGCACGCTGCATCTCCGAGGTCACACACCTGAAGGGACTGCTCTGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS-3UTR CAA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCAAGCACGATGAGTTGCTaGGGGCCCACCAGCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VHFTHFSTHCPVGPMSASSTMSC*GPTSLG Trigger: GCCCAAGCTGGTGGGCCCCAAGCAACTCATCGTGCT...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS-3UTR CAA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCACCCCAGCACGATGAGTaGCTTGGGGCCCACCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VHFTHFSTHCPVGPMSASPQHDE*LGAHQL Trigger: AAGCTGGTGGGCCCCAAGCAACTCATCGTGCTGGGG...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS-3UTR CAA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCAAGGGTACTGTGGTCCTaGATGACCAGGAGCCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: VHFTHFSTHCPVGPMSASRVLWS*MTRSHH Trigger: GTGGTGGCTCCTGGTCATCAAGGACCACAGTACCCT...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS TCA 90 bp | TGGGCCATTCGTTCTTTTCCACCCATTGGAACCAGCAGTAGCTCGTaGCCTGCATGTTTCTCATACAGAGCATCTGCCTTGTCCAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: WAIRSFPPIGTSSSS*PACFSYRASALSKE Trigger: TTCCTTGGACAAGGCAGATGCTCTGTATGAGAAACATGCAGGTCACGAGCTACTGCTGGTTCCAATGGGTGGAAAAGAACGAATGGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS CCA 90 bp | ACCAGTGGGCGTCTTTCACGTCCTCTGGGGTTAGCTCTATTTGCTTaGTGCTTTTGCACACAGACACAACTGGTTCACTTCCCATGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: TSGRLSRPLGLALFA*CFCTQTQLVHFPCQ Trigger: TTGACATGGGAAGTGAACCAGTTGTGTCTGTGTGCAAAAGCACCAAGCAAATAGAGCTAACCCCAGAGGACGTGAAAGACGCCCACTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS CCA 90 bp | CCACCTCCCTTTAATGTAATGTCTTCAGCAACAAGAGGGGGAAACTaGGCCATTCGTTCTTTTCCACCCATTGGAACCAGCAGTAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PPPFNVMSSATRGGN*AIRSFPPIGTSSSS Trigger: CGAGCTACTGCTGGTTCCAATGGGTGGAAAAGAACGAATGGCCCAGTTTCCCCCTCTTGTTGCTGAAGACATTACATTAAAGGGAGGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS-3UTR CAA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCATTAAAGAGAGTGGACTaGCCAGCATTAGTGGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VHFTHFSTHCPVGPMSASLKRVD*PALVVP Trigger: GGGCACCACTAATGCTGGCAAGTCCACTCTCTTTAA...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS-3UTR CAA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCAGTTCTTTTCCACCCATaGGAACCAGCAGTAGCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: VHFTHFSTHCPVGPMSASVLFHP*EPAVAR Trigger: ACGAGCTACTGCTGGTTCCAATGGGTGGAAAAGAAC...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS CCA 90 bp | CCAGGGAGTCGGCATCAAACTCAAAGGGAACTTCGTCCTGTTCTCTaGAGTACGAGAATGTTCTTCCAACTCTTCCTACTATGTAGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: PGSRHQTQRELRPVL*STRMFFQLFLLCSR Trigger: ACGGCTACATAGTAGGAAGAGTTGGAAGAACATTCTCGTACTCCAGAGAACAGGACGAAGTTCCCTTTGAGTTTGATGCCGACTCCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS-3UTR CAA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCAAAAACCATTCCTGGCTaGAGGACAAAGGTTCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VHFTHFSTHCPVGPMSASKTIPG*RTKVLG Trigger: CCCAAGAACCTTTGTCCTCAAGCCAGGAATGGTTTT...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS GCA 90 bp | GAGATGCAGCGTGCCCTCAGAATAAGGTGTTACTGCAACCCAACCTaGAGAGGAGAACTTGATATCAGCTACTGCTTCAAATTTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: EMQRALRIRCYCNPT*RGELDISYCFKFST Trigger: GGTGGAAAATTTGAAGCAGTAGCTGATATCAAGTTCTCCTCTGCAGGTTGGGTTGCAGTAACACCTTATTCTGAGGGCACGCTGCATCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS-3UTR CAA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCAGCCGTGCTTTTTCAGTaGATTGAGCTGACTTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VHFTHFSTHCPVGPMSASAVLFQ*IELTLF Trigger: GAACAAAGTCAGCTCAATCAACTGAAAAAGCACGGC...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS-3UTR CAA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCAGTTAGCTCTATTTGCTaGGTGCTTTTGCACACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VHFTHFSTHCPVGPMSASVSSIC*VLLHTD Trigger: GTCTGTGTGCAAAAGCACCAAGCAAATAGAGCTAAC...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS-3UTR CAA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCATTCATGCGCTGTCCTTaGACATTAACGATATATGGC | + |
|
Preference number: 5 (lower is better) Translates to: VHFTHFSTHCPVGPMSASFMRCP*TLTIYG Trigger: GCCATATATCGTTAATGTCAAAGGACAGCGCATGAA...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS-3UTR CAA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCATTTGGTCGCATCTTCTaGAAGCCTTCTTTGTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VHFTHFSTHCPVGPMSASFGRIF*KPSLSF Trigger: AAAAGACAAAGAAGGCTTCAAGAAGATGCGACCAAA...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS-3UTR CAA 90 bp | GTACATTTCACACATTTCAGTACTCACTGCCCAGTGGGACCCATGTCTGCCTCATTGATTGAGCTGACTTaGTTCTTCCTCACTAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: VHFTHFSTHCPVGPMSASLIELT*FFLTKI Trigger: GATCTTAGTGAGGAAGAACAAAGTCAGCTCAATCAA...TGAGGCAGACATGGGTCCCACTGGGCAGTGAGTACTGAAATGTGTGAAATGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS CAA 90 bp | CTGCAGGCGCAGGGCTCGTCCGTGGTGCACCAGCAGCCAGCAGCGTaGGCACACGGTCCGCGCCGGGCCGCCTTCCGCCTGGGCAGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: LQAQGSSVVHQQPAA*AHGPRRAAFRLGSV Trigger: GACGCTGCCCAGGCGGAAGGCGGCCCGGCGCGGACCGTGTGCCAACGCTGCTGGCTGCTGGTGCACCACGGACGAGCCCTGCGCCTGCAG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS CCA 72 bp | AGGGCTCGTCCGTGGTGCACCAGCAGCCAGCAGCGTTaGCACACGGTCCGCGCCGGGCCGCCTTCCGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RARPWCTSSQQR*HTVRAGPPSAW Trigger: CCAGGCGGAAGGCGGCCCGGCGCGGACCGTGTGCCAACGCTGCTGGCTGCTGGTGCACCACGGACGAGCCCT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS CAA 72 bp | CAGGGCTCGTCCGTGGTGCACCAGCAGCCAGCAGCGTaGGCACACGGTCCGCGCCGGGCCGCCTTCCGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: QGSSVVHQQPAA*AHGPRRAAFRL Trigger: CAGGCGGAAGGCGGCCCGGCGCGGACCGTGTGCCAACGCTGCTGGCTGCTGGTGCACCACGGACGAGCCCTG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS GCA 72 bp | GGCAGTGCAGCTCGGCTCCGCAGCCCGAGCAGTAGATaGCGCTGGGCGGCACCGAGGCGTCTGGAAACTCCG | + |
|
Preference number: 6 (lower is better) Translates to: GSAARLRSPSSR*RWAAPRRLETP Trigger: CGGAGTTTCCAGACGCCTCGGTGCCGCCCAGCGGCATCTACTGCTCGGGCTGCGGAGCCGAGCTGCACTGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS GCA 72 bp | TCGCGGCTTACCTGCAGGCGCAGGGCTCGTCCGTGGTaGACCAGCAGCCAGCAGCGTTGGCACACGGTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SRLTCRRRARPW*TSSQQRWHTVR Trigger: GCGGACCGTGTGCCAACGCTGCTGGCTGCTGGTGCACCACGGACGAGCCCTGCGCCTGCAGGTAAGCCGCGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS TCA 72 bp | GGACGCCGCAGCGCTGCGCTCACAAGCTCCAGGTACTaGTCGCGGCTTACCTGCAGGCGCAGGGCTCGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: GRRSAALTSSRY*SRLTCRRRARP Trigger: CGGACGAGCCCTGCGCCTGCAGGTAAGCCGCGATCAGTACCTGGAGCTTGTGAGCGCAGCGCTGCGGCGTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS CAA 72 bp | CTGCTGCAACTCCCGCAGCTCCTGCAACTCCCGCACTaGTTCCTCCGGGGTCCGCTCCGGGACGTACTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LLQLPQLLQLPH*FLRGPLRDVLR Trigger: CCGGAGTACGTCCCGGAGCGGACCCCGGAGGAACAAGTGCGGGAGTTGCAGGAGCTGCGGGAGTTGCAGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS CAA 72 bp | TTCCCCAGCACGATGAGTTGCTTGGGGCCCACCAGCTaGGGCAGGTCGGGCAGCAGGGCGTCCGGCAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FPSTMSCLGPTS*GRSGSRASGRS Trigger: AGACCTGCCGGACGCCCTGCTGCCCGACCTGCCCAAGCTGGTGGGCCCCAAGCAACTCATCGTGCTGGGGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS GCA 72 bp | ATAGAGCACCAGAGCCGGCCCGGGACGCCGCAGCGCTaGGCTCACAAGCTCCAGGTACTGATCGCGGCTTAC | + |
|
Preference number: 6 (lower is better) Translates to: IEHQSRPGTPQR*AHKLQVLIAAY Trigger: GTAAGCCGCGATCAGTACCTGGAGCTTGTGAGCGCAGCGCTGCGGCGTCCCGGGCCGGCTCTGGTGCTCTAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS GCA 72 bp | CTTGATGACCAGGAGCCACCACGAGCCCGGCGCGGATaGAATCGTCCCACAGCCGCTTCCGCAGCCGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LDDQEPPRARRG*NRPTAASAAAS Trigger: TGAAGCGGCTGCGGAAGCGGCTGTGGGACGATTGCATCCGCGCCGGGCTCGTGGTGGCTCCTGGTCATCAAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS CCA 72 bp | GGAGGTTTAATGTGGTGCCTGGCCAGGGGGAGATGGTaGCCCGGTCGATGGCTTCGGAGCCCTTGGCGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GGLMWCLARGRW*PGRWLRSPWRC Trigger: GCACCGCCAAGGGCTCCGAAGCCATCGACCGGGCCACCATCTCCCCCTGGCCAGGCACCACATTAAACCTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS CAA 72 bp | CTCCAGTGGCTCATCCCCGGCAGGGTACTGTGGTCCTaGATGACCAGGAGCCACCACGAGCCCGGCGCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LQWLIPGRVLWS*MTRSHHEPGAD Trigger: ATCCGCGCCGGGCTCGTGGTGGCTCCTGGTCATCAAGGACCACAGTACCCTGCCGGGGATGAGCCACTGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS CCA 72 bp | GAACCCGACGGCCCAAGGATGATGCACGCTGGCGGATaGGGACCTCACACTTCCCCTCCAGAAGCCACCGTG | + |
|
Preference number: 6 (lower is better) Translates to: EPDGPRMMHAGG*GPHTSPPEATV Trigger: CACGGTGGCTTCTGGAGGGGAAGTGTGAGGTCCCCATCCGCCAGCGTGCATCATCCTTGGGCCGTCGGGTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS CCA 72 bp | TGGTGCCTGGCCAGGGGGAGATGGTGGCCCGGTCGATaGCTTCGGAGCCCTTGGCGGTGCAGTAATCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: WCLARGRWWPGR*LRSPWRCSNQT Trigger: AGTCTGATTACTGCACCGCCAAGGGCTCCGAAGCCATCGACCGGGCCACCATCTCCCCCTGGCCAGGCACCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS CCA 72 bp | TCAGGAGGTTTAATGTGGTGCCTGGCCAGGGGGAGATaGTGGCCCGGTCGATGGCTTCGGAGCCCTTGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SGGLMWCLARGR*WPGRWLRSPWR Trigger: CCGCCAAGGGCTCCGAAGCCATCGACCGGGCCACCATCTCCCCCTGGCCAGGCACCACATTAAACCTCCTGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS CAA 90 bp | TCCACTTTGTTCCCCAGCACGATGAGTTGCTTGGGGCCCACCAGCTaGGGCAGGTCGGGCAGCAGGGCGTCCGGCAGGTCTAGAAGATTC | + |
|
Preference number: 6 (lower is better) Translates to: STLFPSTMSCLGPTS*GRSGSRASGRSRRF Trigger: GAATCTTCTAGACCTGCCGGACGCCCTGCTGCCCGACCTGCCCAAGCTGGTGGGCCCCAAGCAACTCATCGTGCTGGGGAACAAAGTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS CAA 90 bp | CTTTATCTCCTCCAGTGGCTCATCCCCGGCAGGGTACTGTGGTCCTaGATGACCAGGAGCCACCACGAGCCCGGCGCGGATGCAATCGTC | + |
|
Preference number: 6 (lower is better) Translates to: LYLLQWLIPGRVLWS*MTRSHHEPGADAIV Trigger: GACGATTGCATCCGCGCCGGGCTCGTGGTGGCTCCTGGTCATCAAGGACCACAGTACCCTGCCGGGGATGAGCCACTGGAGGAGATAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS GCA 72 bp | CAGTCCCTTCAGGTGTGTGACCTCGGAGATGCAGCGTaGCCTCAGAATAAGGTGTTACTGCAACCCAACCTG | + |
|
Preference number: 6 (lower is better) Translates to: QSLQVCDLGDAA*PQNKVLLQPNL Trigger: CAGGTTGGGTTGCAGTAACACCTTATTCTGAGGGCACGCTGCATCTCCGAGGTCACACACCTGAAGGGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS CAA 72 bp | GAGGGGGAAACTGGGCCATTCGTTCTTTTCCACCCATaGGAACCAGCAGTAGCTCGTGACCTGCATGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: EGETGPFVLFHP*EPAVARDLHVS Trigger: AGAAACATGCAGGTCACGAGCTACTGCTGGTTCCAATGGGTGGAAAAGAACGAATGGCCCAGTTTCCCCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS CAA 90 bp | CAGCAACAAGAGGGGGAAACTGGGCCATTCGTTCTTTTCCACCCATaGGAACCAGCAGTAGCTCGTGACCTGCATGTTTCTCATACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QQQEGETGPFVLFHP*EPAVARDLHVSHTE Trigger: CTCTGTATGAGAAACATGCAGGTCACGAGCTACTGCTGGTTCCAATGGGTGGAAAAGAACGAATGGCCCAGTTTCCCCCTCTTGTTGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS GCA 72 bp | TCGGAGATGCAGCGTGCCCTCAGAATAAGGTGTTACTaGAACCCAACCTGCAGAGGAGAACTTGATATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SEMQRALRIRCY*NPTCRGELDIS Trigger: GCTGATATCAAGTTCTCCTCTGCAGGTTGGGTTGCAGTAACACCTTATTCTGAGGGCACGCTGCATCTCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS CCA 72 bp | GCTTCTTCAGGTTGTGCACCAGGGACGGAGGCTTCTTaGTTTTATAGGCCACACTTTTCTTCATGCGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: ASSGCAPGTEAS*FYRPHFSSCAV Trigger: GACAGCGCATGAAGAAAAGTGTGGCCTATAAAACCAAGAAGCCTCCGTCCCTGGTGCACAACCTGAAGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS TCA 72 bp | CGTTCTTTTCCACCCATTGGAACCAGCAGTAGCTCGTaGCCTGCATGTTTCTCATACAGAGCATCTGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RSFPPIGTSSSS*PACFSYRASAL Trigger: CAAGGCAGATGCTCTGTATGAGAAACATGCAGGTCACGAGCTACTGCTGGTTCCAATGGGTGGAAAAGAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS GCA 72 bp | CGTCCTCTGGGGTTAGCTCTATTTGCTTGGTGCTTTTaGACACAGACACAACTGGTTCACTTCCCATGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: RPLGLALFAWCF*TQTQLVHFPCQ Trigger: TTGACATGGGAAGTGAACCAGTTGTGTCTGTGTGCAAAAGCACCAAGCAAATAGAGCTAACCCCAGAGGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS CAA 72 bp | ACGTCCTCTGGGGTTAGCTCTATTTGCTTGGTGCTTTaGCACACAGACACAACTGGTTCACTTCCCATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: TSSGVSSICLVL*HTDTTGSLPMS Trigger: TGACATGGGAAGTGAACCAGTTGTGTCTGTGTGCAAAAGCACCAAGCAAATAGAGCTAACCCCAGAGGACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS CAA 72 bp | GCGTCTTTCACGTCCTCTGGGGTTAGCTCTATTTGCTaGGTGCTTTTGCACACAGACACAACTGGTTCACTT | + |
|
Preference number: 6 (lower is better) Translates to: ASFTSSGVSSIC*VLLHTDTTGSL Trigger: AAGTGAACCAGTTGTGTCTGTGTGCAAAAGCACCAAGCAAATAGAGCTAACCCCAGAGGACGTGAAAGACGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
||
| CDS GCA 72 bp | CGTGCCCTCAGAATAAGGTGTTACTGCAACCCAACCTaGAGAGGAGAACTTGATATCAGCTACTGCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: RALRIRCYCNPT*RGELDISYCFK Trigger: TTTGAAGCAGTAGCTGATATCAAGTTCTCCTCTGCAGGTTGGGTTGCAGTAACACCTTATTCTGAGGGCACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS TCA 72 bp | AAGGTGTTACTGCAACCCAACCTGCAGAGGAGAACTTaGTATCAGCTACTGCTTCAAATTTTCCACCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: KVLLQPNLQRRT*YQLLLQIFHLP Trigger: AGGGAGGTGGAAAATTTGAAGCAGTAGCTGATATCAAGTTCTCCTCTGCAGGTTGGGTTGCAGTAACACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS CCA 72 bp | CGGCATCAAACTCAAAGGGAACTTCGTCCTGTTCTCTaGAGTACGAGAATGTTCTTCCAACTCTTCCTACTA | + |
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Preference number: 6 (lower is better) Translates to: RHQTQRELRPVL*STRMFFQLFLL Trigger: TAGTAGGAAGAGTTGGAAGAACATTCTCGTACTCCAGAGAACAGGACGAAGTTCCCTTTGAGTTTGATGCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS CCA 72 bp | TTTAATGTAATGTCTTCAGCAACAAGAGGGGGAAACTaGGCCATTCGTTCTTTTCCACCCATTGGAACCAGC | + |
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Preference number: 6 (lower is better) Translates to: FNVMSSATRGGN*AIRSFPPIGTS Trigger: GCTGGTTCCAATGGGTGGAAAAGAACGAATGGCCCAGTTTCCCCCTCTTGTTGCTGAAGACATTACATTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS CAA 72 bp | CGGGCTATCCCACCCAAAAATAAAACCATTCCTGGCTaGAGGACAAAGGTTCTTGGGATAATAGAATGTGTC | + |
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Preference number: 6 (lower is better) Translates to: RAIPPKNKTIPG*RTKVLGIIECV Trigger: GACACATTCTATTATCCCAAGAACCTTTGTCCTCAAGCCAGGAATGGTTTTATTTTTGGGTGGGATAGCCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS CAA 90 bp | TCTTCCTACTATGTAGCCGTGCTTTTTCAGTTGATTGAGCTGACTTaGTTCTTCCTCACTAAGATCTTCCTCAGCTTTGGTCGCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: SSYYVAVLFQLIELT*FFLTKIFLSFGRIF Trigger: GAAGATGCGACCAAAGCTGAGGAAGATCTTAGTGAGGAAGAACAAAGTCAGCTCAATCAACTGAAAAAGCACGGCTACATAGTAGGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS CAA 90 bp | TTGTTCTTCCTCACTAAGATCTTCCTCAGCTTTGGTCGCATCTTCTaGAAGCCTTCTTTGTCTTTTGAACATTCTGTAAGGAGTCGGGTT | + |
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Preference number: 6 (lower is better) Translates to: LFFLTKIFLSFGRIF*KPSLSFEHSVRSRV Trigger: AACCCGACTCCTTACAGAATGTTCAAAAGACAAAGAAGGCTTCAAGAAGATGCGACCAAAGCTGAGGAAGATCTTAGTGAGGAAGAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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| CDS CAA 90 bp | GAATGTTCTTCCAACTCTTCCTACTATGTAGCCGTGCTTTTTCAGTaGATTGAGCTGACTTTGTTCTTCCTCACTAAGATCTTCCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: ECSSNSSYYVAVLFQ*IELTLFFLTKIFLS Trigger: GCTGAGGAAGATCTTAGTGAGGAAGAACAAAGTCAGCTCAATCAACTGAAAAAGCACGGCTACATAGTAGGAAGAGTTGGAAGAACATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047860.9 |
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