Pregenerated sensors for NNT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025453Ensembl transcript IDs: ENSMUST00000069902.13, ENSMUST00000099149.10, ENSMUST00000109204.8, ENSMUST00000223268.2
Found 372 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GAACACGCAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTaGGTTTGGAGGCTTCTTGACAGCCTCGTCTCTTCCCCTAGGGTC | + |
Preference number: 1 (lower is better) Translates to: EHARLKRQVAATAAL*VWRLLDSLVSSPRV Trigger: GACCCTAGGGGAAGAGACGAGGCTGTCAAGAAGCCTCCAAACTCACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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3UTR GCA 90 bp | AGTGTTCCTGAGGGAAGACCTCGAGAGCTCACTGTCTCTCCTAGATaGCAAGAATCAATGTGCCTTAGTGGGGACTCGGAGAGGAGCAGA | + |
Preference number: 1 (lower is better) Translates to: SVPEGRPRELTVSPR*QESMCLSGDSERSR Trigger: TCTGCTCCTCTCCGAGTCCCCACTAAGGCACATTGATTCTTGGCATCTAGGAGAGACAGTGAGCTCTCGAGGTCTTCCCTCAGGAACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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3UTR TCA 90 bp | TTGTTTTGTGAGGCTTCTTTGGGTCTTGAGAGCTTTGCTCATCTATaGACGCCTCCTTTCTCTGTTCCTGCAACCGAAGGCATCGGCTGG | + |
Preference number: 1 (lower is better) Translates to: LFCEASLGLESFAHL*TPPFSVPATEGIGW Trigger: CCAGCCGATGCCTTCGGTTGCAGGAACAGAGAAAGGAGGCGTTCATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCTCACAAAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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3UTR TCA 90 bp | GCCTCCTTTAGAATCATAAATGGATGGAACATTCAAAAGCAAGAATaGTTCTACATCCAGTTTGGCACAGACTCTCTGACAAGCTCTAGG | + |
Preference number: 1 (lower is better) Translates to: ASFRIINGWNIQKQE*FYIQFGTDSLTSSR Trigger: CCTAGAGCTTGTCAGAGAGTCTGTGCCAAACTGGATGTAGAATCATTCTTGCTTTTGAATGTTCCATCCATTTATGATTCTAAAGGAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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3UTR CAA 90 bp | AAAGGCAAGTGGCAGCAACAGCAGCGCTGTGAGTTTGGAGGCTTCTaGACAGCCTCGTCTCTTCCCCTAGGGTCACTTGCCTTAAGTGTC | + |
Preference number: 2 (lower is better) Translates to: KGKWQQQQRCEFGGF*TASSLPLGSLALSV Trigger: GACACTTAAGGCAAGTGACCCTAGGGGAAGAGACGAGGCTGTCAAGAAGCCTCCAAACTCACAGCGCTGCTGTTGCTGCCACTTGCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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3UTR CAA 90 bp | AGCACTGCAACAGCCATTGGGCTCTTCCTCCAAGAGCCCTGTTTTTaGTGCTCCTTGAGACCCATGAAAAATGATCTAAGTGTGCACGGT | + |
Preference number: 2 (lower is better) Translates to: STATAIGLFLQEPCF*CSLRPMKNDLSVHG Trigger: ACCGTGCACACTTAGATCATTTTTCATGGGTCTCAAGGAGCACAAAAAACAGGGCTCTTGGAGGAAGAGCCCAATGGCTGTTGCAGTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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3UTR-3UTR TCA 90 bp | GTGGACAAAATACTCTTGCTTTTTGGGCAATGGCGACAGTACATAGGTAGGCGAGGCTTCTTTGGGTCTTaGGAGCTTTGCTCATCTATG | + |
Preference number: 2 (lower is better) Translates to: VDKILLLFGQWRQYIGRRGFFGS*ELCSSM Trigger: CATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCC...TCGCCTACCTATGTACTGTCGCCATTGCCCAAAAAGCAAGAGTATTTTGTCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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3UTR-3UTR TCA 90 bp | ATAGATTTTAGGCAGGGATGGAGCCATGATAAAGAGTGGGAGGAAGTAAAATTCCCAAGACCGGGTAAGTaGCCTCTGACCTCATCACCT | + |
Preference number: 2 (lower is better) Translates to: IDFRQGWSHDKEWEEVKFPRPGK*PLTSSP Trigger: AGGTGATGAGGTCAGAGGTCACTTACCCGGTCTTGG...GAATTTTACTTCCTCCCACTCTTTATCATGGCTCCATCCCTGCCTAAAATCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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3UTR CAA 90 bp | GCTGATCTTGAAAATCTCCATTGTTTTGTGAGGCTTCTTTGGGTCTaGAGAGCTTTGCTCATCTATGAACGCCTCCTTTCTCTGTTCCTG | + |
Preference number: 2 (lower is better) Translates to: ADLENLHCFVRLLWV*RALLIYERLLSLFL Trigger: CAGGAACAGAGAAAGGAGGCGTTCATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCTCACAAAACAATGGAGATTTTCAAGATCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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3UTR-3UTR GCA 90 bp | ATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCTGGACAAAATACTCTTaGTTTTTGGGCAATGGCGAC | + |
Preference number: 2 (lower is better) Translates to: IRSMAKMQENRSGVDKGFWTKYS*FLGNGD Trigger: GTCGCCATTGCCCAAAAAGCAAGAGTATTTTGTCCA...GAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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3UTR-3UTR TCA 90 bp | GAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATCTGGTGAAAAGGGCTTCTTTGGGTCTTaGGAGCTTTGCTCATCTATG | + |
Preference number: 2 (lower is better) Translates to: ENRSGVDKGFKLVTSGEKGFFGS*ELCSSM Trigger: CATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCC...CTTTTCACCAGATGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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3UTR-3UTR TCA 90 bp | GCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACAGGGTTGCATCTAAAGTaGGGCTGCTTTTTCACTGTG | + |
Preference number: 2 (lower is better) Translates to: AKMQENRSGVDKGFKLVTGLHLK*GCFFTV Trigger: CACAGTGAAAAAGCAGCCTCACTTTAGATGCAACCC...TGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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3UTR-3UTR TCA 90 bp | CATTTATTACTCAGATGGTTGCATTCCATTCAAGCGCACTTAATACAGTCCATTGGCTTCTTTGGGTCTTaGGAGCTTTGCTCATCTATG | + |
Preference number: 2 (lower is better) Translates to: HLLLRWLHSIQAHLIQSIGFFGS*ELCSSM Trigger: CATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCC...AATGGACTGTATTAAGTGCGCTTGAATGGAATGCAACCATCTGAGTAATAAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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3UTR-3UTR TCA 90 bp | CATTTATTACTCAGATGGTTGCATTCCATTCAAGCGCACTTAATACAGTCCATTGGGTTGCATCTAAAGTaGGGCTGCTTTTTCACTGTG | + |
Preference number: 2 (lower is better) Translates to: HLLLRWLHSIQAHLIQSIGLHLK*GCFFTV Trigger: CACAGTGAAAAAGCAGCCTCACTTTAGATGCAACCC...AATGGACTGTATTAAGTGCGCTTGAATGGAATGCAACCATCTGAGTAATAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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3UTR-3UTR GCA 90 bp | ATAGATTTTAGGCAGGGATGGAGCCATGATAAAGAGTGGGAGGAAGTAAAATTCACTGTCTCTCCTAGATaGCAAGAATCAATGTGCCTT | + |
Preference number: 2 (lower is better) Translates to: IDFRQGWSHDKEWEEVKFTVSPR*QESMCL Trigger: AAGGCACATTGATTCTTGGCATCTAGGAGAGACAGT...GAATTTTACTTCCTCCCACTCTTTATCATGGCTCCATCCCTGCCTAAAATCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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3UTR-3UTR GCA 90 bp | CGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGATGGTTGCATTCCATGGAGTATGGCTAAGATaGAAGAGAACAGGTCAGGAG | + |
Preference number: 2 (lower is better) Translates to: RSYITFMNSFITQMVAFHGVWLR*KRTGQE Trigger: CTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCC...ATGGAATGCAACCATCTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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3UTR-3UTR TCA 90 bp | CATTTATTACTCAGATGGTTGCATTCCATTCAAGCGCACTTAATACAGTCCATTATTTCCAATGCTTTTTaGGAAGCATGGGGTGCTGAT | + |
Preference number: 2 (lower is better) Translates to: HLLLRWLHSIQAHLIQSIISNAF*EAWGAD Trigger: ATCAGCACCCCATGCTTCTCAAAAAGCATTGGAAAT...AATGGACTGTATTAAGTGCGCTTGAATGGAATGCAACCATCTGAGTAATAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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3UTR-3UTR TCA 90 bp | CTTTGTCATCAGAGACGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGATTTCCAATGCTTTTTaGGAAGCATGGGGTGCTGAT | + |
Preference number: 2 (lower is better) Translates to: LCHQRRSYITFMNSFITQISNAF*EAWGAD Trigger: ATCAGCACCCCATGCTTCTCAAAAAGCATTGGAAAT...CTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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3UTR-3UTR TCA 90 bp | GAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATCTGGTGAAAAGTACATAGGTAGGCGATaGGAATTTCCAATGCTTTTT | + |
Preference number: 2 (lower is better) Translates to: ENRSGVDKGFKLVTSGEKYIGRR*EFPMLF Trigger: AAAAAGCATTGGAAATTCTCATCGCCTACCTATGTA...CTTTTCACCAGATGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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3UTR-3UTR GCA 90 bp | CATTTATTACTCAGATGGTTGCATTCCATTCAAGCGCACTTAATACAGTCCATTGATGAGAATTTCCAATaGTTTTTGAGAAGCATGGGG | + |
Preference number: 2 (lower is better) Translates to: HLLLRWLHSIQAHLIQSIDENFQ*FLRSMG Trigger: CCCCATGCTTCTCAAAAAGCATTGGAAATTCTCATC...AATGGACTGTATTAAGTGCGCTTGAATGGAATGCAACCATCTGAGTAATAAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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3UTR-3UTR GCA 90 bp | AACCATTTAATGTTAGCTCTTTGTCATCAGAGACGAAGCTACATCACTTTTATGGATGAGAATTTCCAATaGTTTTTGAGAAGCATGGGG | + |
Preference number: 2 (lower is better) Translates to: NHLMLALCHQRRSYITFMDENFQ*FLRSMG Trigger: CCCCATGCTTCTCAAAAAGCATTGGAAATTCTCATC...CATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAGAGCTAACATTAAATGGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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3UTR-3UTR CCA 90 bp | CATTTATTACTCAGATGGTTGCATTCCATTCAAGCGCACTTAATACAGTCCATTGAGACCAATTGGCAATaGGACTTTCAAAAATACAAC | + |
Preference number: 2 (lower is better) Translates to: HLLLRWLHSIQAHLIQSIETNWQ*DFQKYN Trigger: GTTGTATTTTTGAAAGTCCCATTGCCAATTGGTCTC...AATGGACTGTATTAAGTGCGCTTGAATGGAATGCAACCATCTGAGTAATAAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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3UTR-3UTR CCA 90 bp | CTTTGTCATCAGAGACGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGGAGACCAATTGGCAATaGGACTTTCAAAAATACAAC | + |
Preference number: 2 (lower is better) Translates to: LCHQRRSYITFMNSFITQETNWQ*DFQKYN Trigger: GTTGTATTTTTGAAAGTCCCATTGCCAATTGGTCTC...CTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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3UTR-3UTR CCA 90 bp | CGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGATGGTTGCATTCCATGAGACCAATTGGCAATaGGACTTTCAAAAATACAAC | + |
Preference number: 2 (lower is better) Translates to: RSYITFMNSFITQMVAFHETNWQ*DFQKYN Trigger: GTTGTATTTTTGAAAGTCCCATTGCCAATTGGTCTC...ATGGAATGCAACCATCTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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3UTR-3UTR CCA 90 bp | CTTTGTCATCAGAGACGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGGTTAAAGAGACCAATTaGCAATGGGACTTTCAAAAA | + |
Preference number: 2 (lower is better) Translates to: LCHQRRSYITFMNSFITQVKETN*QWDFQK Trigger: TTTTTGAAAGTCCCATTGCCAATTGGTCTCTTTAAC...CTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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3UTR CCA 72 bp | CACCCTCCCAAGAACACGCAAGGCTCAAAAGGCAAGTaGCAGCAACAGCAGCGCTGTGAGTTTGGAGGCTTC | + |
Preference number: 3 (lower is better) Translates to: HPPKNTQGSKGK*QQQQRCEFGGF Trigger: GAAGCCTCCAAACTCACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTCTTGGGAGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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3UTR TCA 72 bp | AGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTaGGTTTGGAGGCTTCTTGACAGCCTCGTCTCTTCC | + |
Preference number: 3 (lower is better) Translates to: RLKRQVAATAAL*VWRLLDSLVSS Trigger: GGAAGAGACGAGGCTGTCAAGAAGCCTCCAAACTCACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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3UTR TCA 72 bp | GAGGCTTCTTTGGGTCTTGAGAGCTTTGCTCATCTATaGACGCCTCCTTTCTCTGTTCCTGCAACCGAAGGC | + |
Preference number: 3 (lower is better) Translates to: EASLGLESFAHL*TPPFSVPATEG Trigger: GCCTTCGGTTGCAGGAACAGAGAAAGGAGGCGTTCATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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3UTR-3UTR CAA 90 bp | ATAGATTTTAGGCAGGGATGGAGCCATGATAAAGAGTGGGAGGAAGTAAAATTCGCACTGCAACAGCCATaGGGCTCTTCCTCCAAGAGC | + |
Preference number: 3 (lower is better) Translates to: IDFRQGWSHDKEWEEVKFALQQP*GSSSKS Trigger: GCTCTTGGAGGAAGAGCCCAATGGCTGTTGCAGTGC...GAATTTTACTTCCTCCCACTCTTTATCATGGCTCCATCCCTGCCTAAAATCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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3UTR-3UTR CAA 90 bp | ATTTGGCATGATCAATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGAGGCTTCTTTGGGTCTaGAGAGCTTTGCTCATCTAT | + |
Preference number: 3 (lower is better) Translates to: IWHDQSGVWLRCKRTGQERLLWV*RALLIY Trigger: ATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCT...CTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGATTGATCATGCCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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3UTR TCA 72 bp | GGAAGTAAAATTCAGTTGACACCAAGACCGGGTAAGTaGCCTCTGACCTCATCACCTATGCCTCCTTTAGAA | + |
Preference number: 3 (lower is better) Translates to: GSKIQLTPRPGK*PLTSSPMPPLE Trigger: TTCTAAAGGAGGCATAGGTGATGAGGTCAGAGGTCACTTACCCGGTCTTGGTGTCAACTGAATTTTACTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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3UTR CCA 72 bp | AACCTGCTGCAGATTTGGCATGATCAATCCGGAGTATaGCTAAGATGCAAGAGAACAGGTCAGGAGTTGATA | + |
Preference number: 3 (lower is better) Translates to: NLLQIWHDQSGV*LRCKRTGQELI Trigger: TATCAACTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGATTGATCATGCCAAATCTGCAGCAGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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3UTR-3UTR CAA 90 bp | ATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCAGGCTTCTTTGGGTCTaGAGAGCTTTGCTCATCTAT | + |
Preference number: 3 (lower is better) Translates to: IRSMAKMQENRSGVDKGFRLLWV*RALLIY Trigger: ATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCT...GAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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3UTR CCA 72 bp | GATCTTGAAAATCTCCATTGTTTTGTGAGGCTTCTTTaGGTCTTGAGAGCTTTGCTCATCTATGAACGCCTC | + |
Preference number: 3 (lower is better) Translates to: DLENLHCFVRLL*VLRALLIYERL Trigger: GAGGCGTTCATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCTCACAAAACAATGGAGATTTTCAAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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3UTR-3UTR CAA 90 bp | GCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACAAGGCTTCTTTGGGTCTaGAGAGCTTTGCTCATCTAT | + |
Preference number: 3 (lower is better) Translates to: AKMQENRSGVDKGFKLVTRLLWV*RALLIY Trigger: ATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCT...TGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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3UTR-3UTR CAA 90 bp | CATTTATTACTCAGATGGTTGCATTCCATTCAAGCGCACTTAATACAGTCCATTGTGGACAAAATACTCTaGCTTTTTGGGCAATGGCGA | + |
Preference number: 3 (lower is better) Translates to: HLLLRWLHSIQAHLIQSIVDKIL*LFGQWR Trigger: TCGCCATTGCCCAAAAAGCAAGAGTATTTTGTCCAC...AATGGACTGTATTAAGTGCGCTTGAATGGAATGCAACCATCTGAGTAATAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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3UTR TCA 72 bp | CTCGAACATTCAACTTCTGAACTGATTTCTAGCTACTaGAAGGGAATTTTAAGAATCCAGTGGGGTTGCATC | + |
Preference number: 3 (lower is better) Translates to: LEHSTSELISSY*KGILRIQWGCI Trigger: GATGCAACCCCACTGGATTCTTAAAATTCCCTTTCAGTAGCTAGAAATCAGTTCAGAAGTTGAATGTTCGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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3UTR-3UTR CAA 90 bp | AACCATTTAATGTTAGCTCTTTGTCATCAGAGACGAAGCTACATCACTTTTATGGTGGACAAAATACTCTaGCTTTTTGGGCAATGGCGA | + |
Preference number: 3 (lower is better) Translates to: NHLMLALCHQRRSYITFMVDKIL*LFGQWR Trigger: TCGCCATTGCCCAAAAAGCAAGAGTATTTTGTCCAC...CATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAGAGCTAACATTAAATGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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3UTR TCA 72 bp | AGAATCATAAATGGATGGAACATTCAAAAGCAAGAATaGTTCTACATCCAGTTTGGCACAGACTCTCTGACA | + |
Preference number: 3 (lower is better) Translates to: RIINGWNIQKQE*FYIQFGTDSLT Trigger: TGTCAGAGAGTCTGTGCCAAACTGGATGTAGAATCATTCTTGCTTTTGAATGTTCCATCCATTTATGATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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3UTR TCA 72 bp | CTCTTTGTCATCAGAGACGAAGCTACATCACTTTTATaGACTCATTTATTACTCAGATGGTTGCATTCCATT | + |
Preference number: 3 (lower is better) Translates to: LFVIRDEATSLL*THLLLRWLHSI Trigger: AATGGAATGCAACCATCTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR GCA 90 bp | GGAGAGGAGCAGATCATGAGCTCAGCACTGCAACAGCCATTGGGCTCTTCCTCCGCCTCCAAGGGTGGCTaGCAGGCCTCCTGCAACCCC | + |
Preference number: 4 (lower is better) Translates to: GEEQIMSSALQQPLGSSSASKGG*QASCNP Trigger: GGGGTTGCAGGAGGCCTGGCAGCCACCCTTGGAGGC...GGAGGAAGAGCCCAATGGCTGTTGCAGTGCTGAGCTCATGATCTGCTCCTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR GCA 90 bp | CTCCCAAGAACACGCAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGTGCGCCCATCGACTTTaGTGCCCCCGCAGAAGCGAG | + |
Preference number: 4 (lower is better) Translates to: LPRTRKAQKASGSNSSAVCAHRL*CPRRSE Trigger: CTCGCTTCTGCGGGGGCAGCAAAGTCGATGGGCGCA...CACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTCTTGGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR GCA 90 bp | GGAGAGGAGCAGATCATGAGCTCAGCACTGCAACAGCCATTGGGCTCTTCCTCCCAGGCCTGCATTGAGTaGGTGCCTTCCAGGGAGCAG | + |
Preference number: 4 (lower is better) Translates to: GEEQIMSSALQQPLGSSSQACIE*VPSREQ Trigger: CTGCTCCCTGGAAGGCACGCACTCAATGCAGGCCTG...GGAGGAAGAGCCCAATGGCTGTTGCAGTGCTGAGCTCATGATCTGCTCCTCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR TCA 90 bp | AGAACACGCAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGAGTTTGAGTCGAGCTGTTCCCTaGGTGGAAAGGCCGCCCAGG | + |
Preference number: 4 (lower is better) Translates to: RTRKAQKASGSNSSAVSLSRAVP*VERPPR Trigger: CCTGGGCGGCCTTTCCACTCAGGGAACAGCTCGACT...CAAACTCACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR GCA 90 bp | AAGATGAACAGCAGTGTTCCTGAGGGAAGACCTCGAGAGCTCACTGTCTCTCCTGCCCATCGACTTTGCTaGCCCCGCAGAAGCGAGCCC | + |
Preference number: 4 (lower is better) Translates to: KMNSSVPEGRPRELTVSPAHRLC*PRRSEP Trigger: GGGCTCGCTTCTGCGGGGGCAGCAAAGTCGATGGGC...AGGAGAGACAGTGAGCTCTCGAGGTCTTCCCTCAGGAACACTGCTGTTCATCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CCA 90 bp | CTCCCAAGAACACGCAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGGGTCATCTGGGAACTTaGAAGCTTCGCCTGCGCCTG | + |
Preference number: 4 (lower is better) Translates to: LPRTRKAQKASGSNSSAVGHLGT*KLRLRL Trigger: CAGGCGCAGGCGAAGCTTCCAAGTTCCCAGATGACC...CACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTCTTGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CCA 90 bp | AGGGAAGACCTCGAGAGCTCACTGTCTCTCCTAGATGCCAAGAATCAATGTGCCGAGCTGTTCCCTGAGTaGAAAGGCCGCCCAGGGCCC | + |
Preference number: 4 (lower is better) Translates to: REDLESSLSLLDAKNQCAELFPE*KGRPGP Trigger: GGGCCCTGGGCGGCCTTTCCACTCAGGGAACAGCTC...GGCACATTGATTCTTGGCATCTAGGAGAGACAGTGAGCTCTCGAGGTCTTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CCA 90 bp | TTGCTCATCTATGAACGCCTCCTTTCTCTGTTCCTGCAACCGAAGGCATCGGCTGAGCTGTTCCCTGAGTaGAAAGGCCGCCCAGGGCCC | + |
Preference number: 4 (lower is better) Translates to: LLIYERLLSLFLQPKASAELFPE*KGRPGP Trigger: GGGCCCTGGGCGGCCTTTCCACTCAGGGAACAGCTC...AGCCGATGCCTTCGGTTGCAGGAACAGAGAAAGGAGGCGTTCATAGATGAGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | AGAACACGCAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGAGTTTGTCAGGCCTCCAAGGGTaGCTGCCAGGCCTCCTGCAA | + |
Preference number: 4 (lower is better) Translates to: RTRKAQKASGSNSSAVSLSGLQG*LPGLLQ Trigger: TTGCAGGAGGCCTGGCAGCCACCCTTGGAGGCCTGA...CAAACTCACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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3UTR CAA 72 bp | TGGCAGCAACAGCAGCGCTGTGAGTTTGGAGGCTTCTaGACAGCCTCGTCTCTTCCCCTAGGGTCACTTGCC | + |
Preference number: 4 (lower is better) Translates to: WQQQQRCEFGGF*TASSLPLGSLA Trigger: GGCAAGTGACCCTAGGGGAAGAGACGAGGCTGTCAAGAAGCCTCCAAACTCACAGCGCTGCTGTTGCTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR TCA 90 bp | CCTCCCAAGAACACGCAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTCACCACAGTGCCTGGTaGGTACGAAGCGTTCGTACA | + |
Preference number: 4 (lower is better) Translates to: PPKNTQGSKGKWQQQQRCHHSAW*VRSVRT Trigger: TGTACGAACGCTTCGTACTCACCAGGCACTGTGGTG...ACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTCTTGGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR TCA 90 bp | TTGCTCATCTATGAACGCCTCCTTTCTCTGTTCCTGCAACCGAAGGCATCGGCTCCAGCAGGCCTGCATTaGGTGCGTGCCTTCCAGGGA | + |
Preference number: 4 (lower is better) Translates to: LLIYERLLSLFLQPKASAPAGLH*VRAFQG Trigger: TCCCTGGAAGGCACGCACTCAATGCAGGCCTGCTGG...AGCCGATGCCTTCGGTTGCAGGAACAGAGAAAGGAGGCGTTCATAGATGAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | CCAAGAACACGCAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGAGTTCAGCAGGTTGTTGTTaGGCAGGAAGCCCTCGGCAC | + |
Preference number: 4 (lower is better) Translates to: PRTRKAQKASGSNSSAVSSAGCC*AGSPRH Trigger: GTGCCGAGGGCTTCCTGCTCAACAACAACCTGCTGA...ACTCACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR GCA 90 bp | TTGCTCATCTATGAACGCCTCCTTTCTCTGTTCCTGCAACCGAAGGCATCGGCTTGCGCCCATCGACTTTaGTGCCCCCGCAGAAGCGAG | + |
Preference number: 4 (lower is better) Translates to: LLIYERLLSLFLQPKASACAHRL*CPRRSE Trigger: CTCGCTTCTGCGGGGGCAGCAAAGTCGATGGGCGCA...AGCCGATGCCTTCGGTTGCAGGAACAGAGAAAGGAGGCGTTCATAGATGAGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | GGAGAGGAGCAGATCATGAGCTCAGCACTGCAACAGCCATTGGGCTCTTCCTCCGCAGGTAAGAACTGCTaGCAGCCCCACCAAACTGTG | + |
Preference number: 4 (lower is better) Translates to: GEEQIMSSALQQPLGSSSAGKNC*QPHQTV Trigger: CACAGTTTGGTGGGGCTGGCAGCAGTTCTTACCTGC...GGAGGAAGAGCCCAATGGCTGTTGCAGTGCTGAGCTCATGATCTGCTCCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR GCA 90 bp | CAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGAGTTTGGAGGCTTCCCTGCATTGAGTGCGTaGCTTCCAGGGAGCAGCAGA | + |
Preference number: 4 (lower is better) Translates to: QGSKGKWQQQQRCEFGGFPALSA*LPGSSR Trigger: TCTGCTGCTCCCTGGAAGGCACGCACTCAATGCAGG...GAAGCCTCCAAACTCACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR TCA 90 bp | GTGAGGCTTCTTTGGGTCTTGAGAGCTTTGCTCATCTATGAACGCCTCCTTTCTCACCAGAGGAGCCGATaGGCGCGCCCACGATGGTCA | + |
Preference number: 4 (lower is better) Translates to: VRLLWVLRALLIYERLLSHQRSR*ARPRWS Trigger: TGACCATCGTGGGCGCGCTCATCGGCTCCTCTGGTG...AGAAAGGAGGCGTTCATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | CCTCCCAAGAACACGCAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTTTTTCCACCAGCTGTTaGCGTTGTGCCATAGCCTCC | + |
Preference number: 4 (lower is better) Translates to: PPKNTQGSKGKWQQQQRCFSTSC*RCAIAS Trigger: GGAGGCTATGGCACAACGTCAACAGCTGGTGGAAAA...ACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTCTTGGGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR TCA 90 bp | CAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGAGTTTGGAGGCTTCTCGGCAATGGGGTACTaGGCTTTAGCAGCACAGAGC | + |
Preference number: 4 (lower is better) Translates to: QGSKGKWQQQQRCEFGGFSAMGY*ALAAQS Trigger: GCTCTGTGCTGCTAAAGCTCAGTACCCCATTGCCGA...GAAGCCTCCAAACTCACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR TCA 90 bp | CCAAGAACACGCAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGAGTGGTCCGTGGGTCGCTTaGACATGTCCAGCATTCTCT | + |
Preference number: 4 (lower is better) Translates to: PRTRKAQKASGSNSSAVSGPWVA*TCPAFS Trigger: AGAGAATGCTGGACATGTTCAAGCGACCCACGGACC...ACTCACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR GCA 90 bp | GTGAGGCTTCTTTGGGTCTTGAGAGCTTTGCTCATCTATGAACGCCTCCTTTCTGCCCATCGACTTTGCTaGCCCCGCAGAAGCGAGCCC | + |
Preference number: 4 (lower is better) Translates to: VRLLWVLRALLIYERLLSAHRLC*PRRSEP Trigger: GGGCTCGCTTCTGCGGGGGCAGCAAAGTCGATGGGC...AGAAAGGAGGCGTTCATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | ATTTGGCATGATCAATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGGCCTCCAAGGGTGGCTaGCAGGCCTCCTGCAACCCC | + |
Preference number: 4 (lower is better) Translates to: IWHDQSGVWLRCKRTGQEASKGG*QASCNP Trigger: GGGGTTGCAGGAGGCCTGGCAGCCACCCTTGGAGGC...CTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGATTGATCATGCCAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | CGCTGTGAGTTTGGAGGCTTCTTGACAGCCTCGTCTCTTCCCCTAGGGTCACTTACTTCCTTCATCCCTTaGATCTGGGCCCCTGCTGCT | + |
Preference number: 4 (lower is better) Translates to: RCEFGGFLTASSLPLGSLTSFIP*IWAPAA Trigger: AGCAGCAGGGGCCCAGATCCAAGGGATGAAGGAAGT...AAGTGACCCTAGGGGAAGAGACGAGGCTGTCAAGAAGCCTCCAAACTCACAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CCA 90 bp | GGAGAGGAGCAGATCATGAGCTCAGCACTGCAACAGCCATTGGGCTCTTCCTCCTTCGCGTATCCTCCTTaGCCCTCACCAGATTCCTTC | + |
Preference number: 4 (lower is better) Translates to: GEEQIMSSALQQPLGSSSFAYPP*PSPDSF Trigger: GAAGGAATCTGGTGAGGGCCAAGGAGGATACGCGAA...GGAGGAAGAGCCCAATGGCTGTTGCAGTGCTGAGCTCATGATCTGCTCCTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR TCA 90 bp | GTGAGGCTTCTTTGGGTCTTGAGAGCTTTGCTCATCTATGAACGCCTCCTTTCTCCAGCAGGCCTGCATTaGGTGCGTGCCTTCCAGGGA | + |
Preference number: 4 (lower is better) Translates to: VRLLWVLRALLIYERLLSPAGLH*VRAFQG Trigger: TCCCTGGAAGGCACGCACTCAATGCAGGCCTGCTGG...AGAAAGGAGGCGTTCATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | ATTTGGCATGATCAATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGCACCAGAGGAGCCGATaGGCGCGCCCACGATGGTCA | + |
Preference number: 4 (lower is better) Translates to: IWHDQSGVWLRCKRTGQEHQRSR*ARPRWS Trigger: TGACCATCGTGGGCGCGCTCATCGGCTCCTCTGGTG...CTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGATTGATCATGCCAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | CTCCCAAGAACACGCAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGCTGCGTTGTCCAGGTTaGTTTCTGTATGTGTGCCAG | + |
Preference number: 4 (lower is better) Translates to: LPRTRKAQKASGSNSSAVLRCPG*FLYVCQ Trigger: CTGGCACACATACAGAAATCAACCTGGACAACGCAG...CACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTCTTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR GCA 90 bp | GTGGACAAAATACTCTTGCTTTTTGGGCAATGGCGACAGTACATAGGTAGGCGAGCCCATCGACTTTGCTaGCCCCGCAGAAGCGAGCCC | + |
Preference number: 4 (lower is better) Translates to: VDKILLLFGQWRQYIGRRAHRLC*PRRSEP Trigger: GGGCTCGCTTCTGCGGGGGCAGCAAAGTCGATGGGC...TCGCCTACCTATGTACTGTCGCCATTGCCCAAAAAGCAAGAGTATTTTGTCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | CCAAGAACACGCAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGAGTCATGAGAGTAGAGAGTaGGGACACAGAGCCCAGACA | + |
Preference number: 4 (lower is better) Translates to: PRTRKAQKASGSNSSAVSHESRE*GHRAQT Trigger: TGTCTGGGCTCTGTGTCCGCACTCTCTACTCTCATG...ACTCACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR GCA 90 bp | CCAAGAACACGCAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGAGTGATGGTGCCACCCATTaGCATTGCTCCAGACATCTG | + |
Preference number: 4 (lower is better) Translates to: PRTRKAQKASGSNSSAVSDGATH*HCSRHL Trigger: CAGATGTCTGGAGCAATGGCAATGGGTGGCACCATC...ACTCACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CCA 90 bp | CTCCCAAGAACACGCAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGTCTGTAGAGGTCATCTaGGAACTTGGAAGCTTCGCC | + |
Preference number: 4 (lower is better) Translates to: LPRTRKAQKASGSNSSAVSVEVI*ELGSFA Trigger: GGCGAAGCTTCCAAGTTCCCAGATGACCTCTACAGA...CACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTCTTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CCA 90 bp | CCAAGAACACGCAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGAGTGTCACTCTTGGAACCTaGTCCATCGCCAGAACTGTG | + |
Preference number: 4 (lower is better) Translates to: PRTRKAQKASGSNSSAVSVTLGT*SIARTV Trigger: CACAGTTCTGGCGATGGACCAGGTTCCAAGAGTGAC...ACTCACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CCA 90 bp | GTGAGGCTTCTTTGGGTCTTGAGAGCTTTGCTCATCTATGAACGCCTCCTTTCTTCAGGCCTCCAAGGGTaGCTGCCAGGCCTCCTGCAA | + |
Preference number: 4 (lower is better) Translates to: VRLLWVLRALLIYERLLSSGLQG*LPGLLQ Trigger: TTGCAGGAGGCCTGGCAGCCACCCTTGGAGGCCTGA...AGAAAGGAGGCGTTCATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | AGAACACGCAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGAGTTTGTGTTGGCCATGGAACTaGGAGCATCATAGCCCTGAG | + |
Preference number: 4 (lower is better) Translates to: RTRKAQKASGSNSSAVSLCWPWN*EHHSPE Trigger: CTCAGGGCTATGATGCTCTCAGTTCCATGGCCAACA...CAAACTCACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR TCA 90 bp | AGACCCATGAAAAATGATCTAAGTGTGCACGGTCCTCCACTCTTCTGCCTAACACCAGCAGGCCTGCATTaGGTGCGTGCCTTCCAGGGA | + |
Preference number: 4 (lower is better) Translates to: RPMKNDLSVHGPPLFCLTPAGLH*VRAFQG Trigger: TCCCTGGAAGGCACGCACTCAATGCAGGCCTGCTGG...TGTTAGGCAGAAGAGTGGAGGACCGTGCACACTTAGATCATTTTTCATGGGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR TCA 90 bp | CTCCCAAGAACACGCAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGATGTCCAGCATTCTCTaGGTCACCAGAAAACCACCT | + |
Preference number: 4 (lower is better) Translates to: LPRTRKAQKASGSNSSAVMSSIL*VTRKPP Trigger: AGGTGGTTTTCTGGTGACTCAGAGAATGCTGGACAT...CACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTCTTGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR TCA 90 bp | GTGGACAAAATACTCTTGCTTTTTGGGCAATGGCGACAGTACATAGGTAGGCGAAGTCGAGCTGTTCCCTaGGTGGAAAGGCCGCCCAGG | + |
Preference number: 4 (lower is better) Translates to: VDKILLLFGQWRQYIGRRSRAVP*VERPPR Trigger: CCTGGGCGGCCTTTCCACTCAGGGAACAGCTCGACT...TCGCCTACCTATGTACTGTCGCCATTGCCCAAAAAGCAAGAGTATTTTGTCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | GTGAGGCTTCTTTGGGTCTTGAGAGCTTTGCTCATCTATGAACGCCTCCTTTCTTGGGGGCCCTCACTTTaGCCACCAGATCAGAAGCCA | + |
Preference number: 4 (lower is better) Translates to: VRLLWVLRALLIYERLLSWGPSL*PPDQKP Trigger: TGGCTTCTGATCTGGTGGTCAAAGTGAGGGCCCCCA...AGAAAGGAGGCGTTCATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | ATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCCCAGCAGGCCTGCATTaGGTGCGTGCCTTCCAGGGA | + |
Preference number: 4 (lower is better) Translates to: IRSMAKMQENRSGVDKGFPAGLH*VRAFQG Trigger: TCCCTGGAAGGCACGCACTCAATGCAGGCCTGCTGG...GAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | GTGAGGCTTCTTTGGGTCTTGAGAGCTTTGCTCATCTATGAACGCCTCCTTTCTTCAGCAGGTTGTTGTTaGGCAGGAAGCCCTCGGCAC | + |
Preference number: 4 (lower is better) Translates to: VRLLWVLRALLIYERLLSSAGCC*AGSPRH Trigger: GTGCCGAGGGCTTCCTGCTCAACAACAACCTGCTGA...AGAAAGGAGGCGTTCATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | AGGGAAGACCTCGAGAGCTCACTGTCTCTCCTAGATGCCAAGAATCAATGTGCCCCCCGCAGGAGACAATaGAACTCGCTTCTCGTTTTG | + |
Preference number: 4 (lower is better) Translates to: REDLESSLSLLDAKNQCAPRRRQ*NSLLVL Trigger: CAAAACGAGAAGCGAGTTGCATTGTCTCCTGCGGGG...GGCACATTGATTCTTGGCATCTAGGAGAGACAGTGAGCTCTCGAGGTCTTCCCT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR GCA 90 bp | GTGAGGCTTCTTTGGGTCTTGAGAGCTTTGCTCATCTATGAACGCCTCCTTTCTCCTGCATTGAGTGCGTaGCTTCCAGGGAGCAGCAGA | + |
Preference number: 4 (lower is better) Translates to: VRLLWVLRALLIYERLLSPALSA*LPGSSR Trigger: TCTGCTGCTCCCTGGAAGGCACGCACTCAATGCAGG...AGAAAGGAGGCGTTCATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | GTGGACAAAATACTCTTGCTTTTTGGGCAATGGCGACAGTACATAGGTAGGCGACAGGCCTGCATTGAGTaGGTGCCTTCCAGGGAGCAG | + |
Preference number: 4 (lower is better) Translates to: VDKILLLFGQWRQYIGRRQACIE*VPSREQ Trigger: CTGCTCCCTGGAAGGCACGCACTCAATGCAGGCCTG...TCGCCTACCTATGTACTGTCGCCATTGCCCAAAAAGCAAGAGTATTTTGTCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | CCTCCCAAGAACACGCAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTTTTGGAAAATCTCCTTaGGGACCCCAACTGTCAACT | + |
Preference number: 4 (lower is better) Translates to: PPKNTQGSKGKWQQQQRCFGKSP*GPQLST Trigger: AGTTGACAGTTGGGGTCCCCAAGGAGATTTTCCAAA...ACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTCTTGGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CCA 90 bp | TTGCTCATCTATGAACGCCTCCTTTCTCTGTTCCTGCAACCGAAGGCATCGGCTTTCGCGTATCCTCCTTaGCCCTCACCAGATTCCTTC | + |
Preference number: 4 (lower is better) Translates to: LLIYERLLSLFLQPKASAFAYPP*PSPDSF Trigger: GAAGGAATCTGGTGAGGGCCAAGGAGGATACGCGAA...AGCCGATGCCTTCGGTTGCAGGAACAGAGAAAGGAGGCGTTCATAGATGAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | AGACCCATGAAAAATGATCTAAGTGTGCACGGTCCTCCACTCTTCTGCCTAACATGGGGGCCCTCACTTTaGCCACCAGATCAGAAGCCA | + |
Preference number: 4 (lower is better) Translates to: RPMKNDLSVHGPPLFCLTWGPSL*PPDQKP Trigger: TGGCTTCTGATCTGGTGGTCAAAGTGAGGGCCCCCA...TGTTAGGCAGAAGAGTGGAGGACCGTGCACACTTAGATCATTTTTCATGGGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR TCA 90 bp | AAGATGAACAGCAGTGTTCCTGAGGGAAGACCTCGAGAGCTCACTGTCTCTCCTCAGCACCAAGGGATTTaGACTGTTCCAAAGCAGCAG | + |
Preference number: 4 (lower is better) Translates to: KMNSSVPEGRPRELTVSPQHQGI*TVPKQQ Trigger: CTGCTGCTTTGGAACAGTTCAAATCCCTTGGTGCTG...AGGAGAGACAGTGAGCTCTCGAGGTCTTCCCTCAGGAACACTGCTGTTCATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR TCA 90 bp | ATAGATTTTAGGCAGGGATGGAGCCATGATAAAGAGTGGGAGGAAGTAAAATTCCACCAGAGGAGCCGATaGGCGCGCCCACGATGGTCA | + |
Preference number: 4 (lower is better) Translates to: IDFRQGWSHDKEWEEVKFHQRSR*ARPRWS Trigger: TGACCATCGTGGGCGCGCTCATCGGCTCCTCTGGTG...GAATTTTACTTCCTCCCACTCTTTATCATGGCTCCATCCCTGCCTAAAATCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR TCA 90 bp | GTGAGGCTTCTTTGGGTCTTGAGAGCTTTGCTCATCTATGAACGCCTCCTTTCTTCGGCAATGGGGTACTaGGCTTTAGCAGCACAGAGC | + |
Preference number: 4 (lower is better) Translates to: VRLLWVLRALLIYERLLSSAMGY*ALAAQS Trigger: GCTCTGTGCTGCTAAAGCTCAGTACCCCATTGCCGA...AGAAAGGAGGCGTTCATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
||
CDS-3UTR TCA 90 bp | ATTTGGCATGATCAATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGAGGAGCACATTAAGCTaGCCAGGCATTCGGCCCGCA | + |
Preference number: 4 (lower is better) Translates to: IWHDQSGVWLRCKRTGQERSTLS*PGIRPA Trigger: TGCGGGCCGAATGCCTGGTCAGCTTAATGTGCTCCT...CTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGATTGATCATGCCAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | GTGAGGCTTCTTTGGGTCTTGAGAGCTTTGCTCATCTATGAACGCCTCCTTTCTGGTCCGTGGGTCGCTTaGACATGTCCAGCATTCTCT | + |
Preference number: 4 (lower is better) Translates to: VRLLWVLRALLIYERLLSGPWVA*TCPAFS Trigger: AGAGAATGCTGGACATGTTCAAGCGACCCACGGACC...AGAAAGGAGGCGTTCATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | GATCTTGAAAATCTCCATTGTTTTGTGAGGCTTCTTTGGGTCTTGAGAGCTTTGGCCCATCGACTTTGCTaGCCCCGCAGAAGCGAGCCC | + |
Preference number: 4 (lower is better) Translates to: DLENLHCFVRLLWVLRALAHRLC*PRRSEP Trigger: GGGCTCGCTTCTGCGGGGGCAGCAAAGTCGATGGGC...CAAAGCTCTCAAGACCCAAAGAAGCCTCACAAAACAATGGAGATTTTCAAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | GTGGACAAAATACTCTTGCTTTTTGGGCAATGGCGACAGTACATAGGTAGGCGACCTGCATTGAGTGCGTaGCTTCCAGGGAGCAGCAGA | + |
Preference number: 4 (lower is better) Translates to: VDKILLLFGQWRQYIGRRPALSA*LPGSSR Trigger: TCTGCTGCTCCCTGGAAGGCACGCACTCAATGCAGG...TCGCCTACCTATGTACTGTCGCCATTGCCCAAAAAGCAAGAGTATTTTGTCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | GCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACAGCCTCCAAGGGTGGCTaGCAGGCCTCCTGCAACCCC | + |
Preference number: 4 (lower is better) Translates to: AKMQENRSGVDKGFKLVTASKGG*QASCNP Trigger: GGGGTTGCAGGAGGCCTGGCAGCCACCCTTGGAGGC...TGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | GTGAGGCTTCTTTGGGTCTTGAGAGCTTTGCTCATCTATGAACGCCTCCTTTCTACTTCCTTCATCCCTTaGATCTGGGCCCCTGCTGCT | + |
Preference number: 4 (lower is better) Translates to: VRLLWVLRALLIYERLLSTSFIP*IWAPAA Trigger: AGCAGCAGGGGCCCAGATCCAAGGGATGAAGGAAGT...AGAAAGGAGGCGTTCATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | GTGAGGCTTCTTTGGGTCTTGAGAGCTTTGCTCATCTATGAACGCCTCCTTTCTCATTCGGCCCGCAACTaGGTGGATTCCAAACCTGAC | + |
Preference number: 4 (lower is better) Translates to: VRLLWVLRALLIYERLLSHSARN*VDSKPD Trigger: GTCAGGTTTGGAATCCACCCAGTTGCGGGCCGAATG...AGAAAGGAGGCGTTCATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | ATTTGGCATGATCAATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGCACCACAGTGCCTGGTaGGTACGAAGCGTTCGTACA | + |
Preference number: 4 (lower is better) Translates to: IWHDQSGVWLRCKRTGQEHHSAW*VRSVRT Trigger: TGTACGAACGCTTCGTACTCACCAGGCACTGTGGTG...CTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGATTGATCATGCCAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | GTGGACAAAATACTCTTGCTTTTTGGGCAATGGCGACAGTACATAGGTAGGCGACACCACAGTGCCTGGTaGGTACGAAGCGTTCGTACA | + |
Preference number: 4 (lower is better) Translates to: VDKILLLFGQWRQYIGRRHHSAW*VRSVRT Trigger: TGTACGAACGCTTCGTACTCACCAGGCACTGTGGTG...TCGCCTACCTATGTACTGTCGCCATTGCCCAAAAAGCAAGAGTATTTTGTCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | ATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCTCAGCAGGTTGTTGTTaGGCAGGAAGCCCTCGGCAC | + |
Preference number: 4 (lower is better) Translates to: IRSMAKMQENRSGVDKGFSAGCC*AGSPRH Trigger: GTGCCGAGGGCTTCCTGCTCAACAACAACCTGCTGA...GAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | GTGGACAAAATACTCTTGCTTTTTGGGCAATGGCGACAGTACATAGGTAGGCGAACTTCCTTCATCCCTTaGATCTGGGCCCCTGCTGCT | + |
Preference number: 4 (lower is better) Translates to: VDKILLLFGQWRQYIGRRTSFIP*IWAPAA Trigger: AGCAGCAGGGGCCCAGATCCAAGGGATGAAGGAAGT...TCGCCTACCTATGTACTGTCGCCATTGCCCAAAAAGCAAGAGTATTTTGTCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | GCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACAGAGCTGTTCCCTGAGTaGAAAGGCCGCCCAGGGCCC | + |
Preference number: 4 (lower is better) Translates to: AKMQENRSGVDKGFKLVTELFPE*KGRPGP Trigger: GGGCCCTGGGCGGCCTTTCCACTCAGGGAACAGCTC...TGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | GATCTTGAAAATCTCCATTGTTTTGTGAGGCTTCTTTGGGTCTTGAGAGCTTTGTCAGGCCTCCAAGGGTaGCTGCCAGGCCTCCTGCAA | + |
Preference number: 4 (lower is better) Translates to: DLENLHCFVRLLWVLRALSGLQG*LPGLLQ Trigger: TTGCAGGAGGCCTGGCAGCCACCCTTGGAGGCCTGA...CAAAGCTCTCAAGACCCAAAGAAGCCTCACAAAACAATGGAGATTTTCAAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | GTGGACAAAATACTCTTGCTTTTTGGGCAATGGCGACAGTACATAGGTAGGCGAAGCTTCGCCTGCGCCTaGTTCCACGACAACATTGAA | + |
Preference number: 4 (lower is better) Translates to: VDKILLLFGQWRQYIGRRSFACA*FHDNIE Trigger: TTCAATGTTGTCGTGGAATCAGGCGCAGGCGAAGCT...TCGCCTACCTATGTACTGTCGCCATTGCCCAAAAAGCAAGAGTATTTTGTCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | ATTTGGCATGATCAATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGTGTTGGCCATGGAACTaGGAGCATCATAGCCCTGAG | + |
Preference number: 4 (lower is better) Translates to: IWHDQSGVWLRCKRTGQECWPWN*EHHSPE Trigger: CTCAGGGCTATGATGCTCTCAGTTCCATGGCCAACA...CTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGATTGATCATGCCAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | GTGGACAAAATACTCTTGCTTTTTGGGCAATGGCGACAGTACATAGGTAGGCGATTTTCCACCAGCTGTTaGCGTTGTGCCATAGCCTCC | + |
Preference number: 4 (lower is better) Translates to: VDKILLLFGQWRQYIGRRFSTSC*RCAIAS Trigger: GGAGGCTATGGCACAACGTCAACAGCTGGTGGAAAA...TCGCCTACCTATGTACTGTCGCCATTGCCCAAAAAGCAAGAGTATTTTGTCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | GTGAGGCTTCTTTGGGTCTTGAGAGCTTTGCTCATCTATGAACGCCTCCTTTCTAACACAGCACAAGCCTaGGCCCAGGTACATGATTTC | + |
Preference number: 4 (lower is better) Translates to: VRLLWVLRALLIYERLLSNTAQA*AQVHDF Trigger: GAAATCATGTACCTGGGCTCAGGCTTGTGCTGTGTT...AGAAAGGAGGCGTTCATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | ATTTGGCATGATCAATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGCCCCGCAGGAGACAATaGAACTCGCTTCTCGTTTTG | + |
Preference number: 4 (lower is better) Translates to: IWHDQSGVWLRCKRTGQEPRRRQ*NSLLVL Trigger: CAAAACGAGAAGCGAGTTGCATTGTCTCCTGCGGGG...CTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGATTGATCATGCCAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | GTGGACAAAATACTCTTGCTTTTTGGGCAATGGCGACAGTACATAGGTAGGCGACCAGCAGCTGTGATCTaGCCAGTGAAAAACCTCCCA | + |
Preference number: 4 (lower is better) Translates to: VDKILLLFGQWRQYIGRRPAAVI*PVKNLP Trigger: TGGGAGGTTTTTCACTGGGCAGATCACAGCTGCTGG...TCGCCTACCTATGTACTGTCGCCATTGCCCAAAAAGCAAGAGTATTTTGTCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | AGACCCATGAAAAATGATCTAAGTGTGCACGGTCCTCCACTCTTCTGCCTAACAAAATCCTCGGACAACTaGGCCCATCGACTTTGCTGC | + |
Preference number: 4 (lower is better) Translates to: RPMKNDLSVHGPPLFCLTKSSDN*AHRLCC Trigger: GCAGCAAAGTCGATGGGCGCAGTTGTCCGAGGATTT...TGTTAGGCAGAAGAGTGGAGGACCGTGCACACTTAGATCATTTTTCATGGGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR GCA 90 bp | GTGAGGCTTCTTTGGGTCTTGAGAGCTTTGCTCATCTATGAACGCCTCCTTTCTGGATGTCCACCTCCTTaGACTGTTGAGCAAAGAGCT | + |
Preference number: 4 (lower is better) Translates to: VRLLWVLRALLIYERLLSGCPPP*TVEQRA Trigger: AGCTCTTTGCTCAACAGTGCAAGGAGGTGGACATCC...AGAAAGGAGGCGTTCATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | ATTTGGCATGATCAATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGTCCCGAACTTTGGCCTaGAGAGCGTCACATGTCTTC | + |
Preference number: 4 (lower is better) Translates to: IWHDQSGVWLRCKRTGQESRTLA*RASHVF Trigger: GAAGACATGTGACGCTCTGCAGGCCAAAGTTCGGGA...CTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGATTGATCATGCCAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | CGCTGTGAGTTTGGAGGCTTCTTGACAGCCTCGTCTCTTCCCCTAGGGTCACTTCTTATATGGAATTCCTaGCTTTACCGGGGATTTACA | + |
Preference number: 4 (lower is better) Translates to: RCEFGGFLTASSLPLGSLLIWNS*LYRGFT Trigger: TGTAAATCCCCGGTAAAGCCAGGAATTCCATATAAG...AAGTGACCCTAGGGGAAGAGACGAGGCTGTCAAGAAGCCTCCAAACTCACAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CCA 90 bp | GTGGACAAAATACTCTTGCTTTTTGGGCAATGGCGACAGTACATAGGTAGGCGAGTCACTCTTGGAACCTaGTCCATCGCCAGAACTGTG | + |
Preference number: 4 (lower is better) Translates to: VDKILLLFGQWRQYIGRRVTLGT*SIARTV Trigger: CACAGTTCTGGCGATGGACCAGGTTCCAAGAGTGAC...TCGCCTACCTATGTACTGTCGCCATTGCCCAAAAAGCAAGAGTATTTTGTCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | TTGCTCATCTATGAACGCCTCCTTTCTCTGTTCCTGCAACCGAAGGCATCGGCTTGCCAGAAATTTCCATaGGTTTTCCACCAGCTGTTG | + |
Preference number: 4 (lower is better) Translates to: LLIYERLLSLFLQPKASACQKFP*VFHQLL Trigger: CAACAGCTGGTGGAAAACCCATGGAAATTTCTGGCA...AGCCGATGCCTTCGGTTGCAGGAACAGAGAAAGGAGGCGTTCATAGATGAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | GTGGACAAAATACTCTTGCTTTTTGGGCAATGGCGACAGTACATAGGTAGGCGACGGCCCGCAACTGGGTaGATTCCAAACCTGACTTTT | + |
Preference number: 4 (lower is better) Translates to: VDKILLLFGQWRQYIGRRRPATG*IPNLTF Trigger: AAAAGTCAGGTTTGGAATCCACCCAGTTGCGGGCCG...TCGCCTACCTATGTACTGTCGCCATTGCCCAAAAAGCAAGAGTATTTTGTCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | GTGGACAAAATACTCTTGCTTTTTGGGCAATGGCGACAGTACATAGGTAGGCGACAGCACCAAGGGATTTaGACTGTTCCAAAGCAGCAG | + |
Preference number: 4 (lower is better) Translates to: VDKILLLFGQWRQYIGRRQHQGI*TVPKQQ Trigger: CTGCTGCTTTGGAACAGTTCAAATCCCTTGGTGCTG...TCGCCTACCTATGTACTGTCGCCATTGCCCAAAAAGCAAGAGTATTTTGTCCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | GATCTTGAAAATCTCCATTGTTTTGTGAGGCTTCTTTGGGTCTTGAGAGCTTTGTCAGCAGGTTGTTGTTaGGCAGGAAGCCCTCGGCAC | + |
Preference number: 4 (lower is better) Translates to: DLENLHCFVRLLWVLRALSAGCC*AGSPRH Trigger: GTGCCGAGGGCTTCCTGCTCAACAACAACCTGCTGA...CAAAGCTCTCAAGACCCAAAGAAGCCTCACAAAACAATGGAGATTTTCAAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | AACCATTTAATGTTAGCTCTTTGTCATCAGAGACGAAGCTACATCACTTTTATGCACCAGAGGAGCCGATaGGCGCGCCCACGATGGTCA | + |
Preference number: 4 (lower is better) Translates to: NHLMLALCHQRRSYITFMHQRSR*ARPRWS Trigger: TGACCATCGTGGGCGCGCTCATCGGCTCCTCTGGTG...CATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAGAGCTAACATTAAATGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR TCA 90 bp | GTGGACAAAATACTCTTGCTTTTTGGGCAATGGCGACAGTACATAGGTAGGCGACTGCGTTGTCCAGGTTaGTTTCTGTATGTGTGCCAG | + |
Preference number: 4 (lower is better) Translates to: VDKILLLFGQWRQYIGRRLRCPG*FLYVCQ Trigger: CTGGCACACATACAGAAATCAACCTGGACAACGCAG...TCGCCTACCTATGTACTGTCGCCATTGCCCAAAAAGCAAGAGTATTTTGTCCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | GATCTTGAAAATCTCCATTGTTTTGTGAGGCTTCTTTGGGTCTTGAGAGCTTTGAGGAGCACATTAAGCTaGCCAGGCATTCGGCCCGCA | + |
Preference number: 4 (lower is better) Translates to: DLENLHCFVRLLWVLRALRSTLS*PGIRPA Trigger: TGCGGGCCGAATGCCTGGTCAGCTTAATGTGCTCCT...CAAAGCTCTCAAGACCCAAAGAAGCCTCACAAAACAATGGAGATTTTCAAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | CATTTATTACTCAGATGGTTGCATTCCATTCAAGCGCACTTAATACAGTCCATTTGCGCCCATCGACTTTaGTGCCCCCGCAGAAGCGAG | + |
Preference number: 4 (lower is better) Translates to: HLLLRWLHSIQAHLIQSICAHRL*CPRRSE Trigger: CTCGCTTCTGCGGGGGCAGCAAAGTCGATGGGCGCA...AATGGACTGTATTAAGTGCGCTTGAATGGAATGCAACCATCTGAGTAATAAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | ATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATCCTCGGACAACTaGGCCCATCGACTTTGCTGC | + |
Preference number: 4 (lower is better) Translates to: IRSMAKMQENRSGVDKGFKSSDN*AHRLCC Trigger: GCAGCAAAGTCGATGGGCGCAGTTGTCCGAGGATTT...GAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | AGACCCATGAAAAATGATCTAAGTGTGCACGGTCCTCCACTCTTCTGCCTAACAGGATGTCCACCTCCTTaGACTGTTGAGCAAAGAGCT | + |
Preference number: 4 (lower is better) Translates to: RPMKNDLSVHGPPLFCLTGCPPP*TVEQRA Trigger: AGCTCTTTGCTCAACAGTGCAAGGAGGTGGACATCC...TGTTAGGCAGAAGAGTGGAGGACCGTGCACACTTAGATCATTTTTCATGGGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR GCA 90 bp | GATCTTGAAAATCTCCATTGTTTTGTGAGGCTTCTTTGGGTCTTGAGAGCTTTGCCTGCATTGAGTGCGTaGCTTCCAGGGAGCAGCAGA | + |
Preference number: 4 (lower is better) Translates to: DLENLHCFVRLLWVLRALPALSA*LPGSSR Trigger: TCTGCTGCTCCCTGGAAGGCACGCACTCAATGCAGG...CAAAGCTCTCAAGACCCAAAGAAGCCTCACAAAACAATGGAGATTTTCAAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | GCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACACAGGCCTGCATTGAGTaGGTGCCTTCCAGGGAGCAG | + |
Preference number: 4 (lower is better) Translates to: AKMQENRSGVDKGFKLVTQACIE*VPSREQ Trigger: CTGCTCCCTGGAAGGCACGCACTCAATGCAGGCCTG...TGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | ATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCCATGAGAGTAGAGAGTaGGGACACAGAGCCCAGACA | + |
Preference number: 4 (lower is better) Translates to: IRSMAKMQENRSGVDKGFHESRE*GHRAQT Trigger: TGTCTGGGCTCTGTGTCCGCACTCTCTACTCTCATG...GAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | ATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCGATGGTGCCACCCATTaGCATTGCTCCAGACATCTG | + |
Preference number: 4 (lower is better) Translates to: IRSMAKMQENRSGVDKGFDGATH*HCSRHL Trigger: CAGATGTCTGGAGCAATGGCAATGGGTGGCACCATC...GAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | ATTTGGCATGATCAATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGTCTGTAGAGGTCATCTaGGAACTTGGAAGCTTCGCC | + |
Preference number: 4 (lower is better) Translates to: IWHDQSGVWLRCKRTGQESVEVI*ELGSFA Trigger: GGCGAAGCTTCCAAGTTCCCAGATGACCTCTACAGA...CTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGATTGATCATGCCAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | ATTTGGCATGATCAATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGAGCTATTGTCACTCTTaGAACCTGGTCCATCGCCAG | + |
Preference number: 4 (lower is better) Translates to: IWHDQSGVWLRCKRTGQESYCHS*NLVHRQ Trigger: CTGGCGATGGACCAGGTTCCAAGAGTGACAATAGCT...CTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGATTGATCATGCCAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | AGACCCATGAAAAATGATCTAAGTGTGCACGGTCCTCCACTCTTCTGCCTAACAAGCTATTGTCACTCTTaGAACCTGGTCCATCGCCAG | + |
Preference number: 4 (lower is better) Translates to: RPMKNDLSVHGPPLFCLTSYCHS*NLVHRQ Trigger: CTGGCGATGGACCAGGTTCCAAGAGTGACAATAGCT...TGTTAGGCAGAAGAGTGGAGGACCGTGCACACTTAGATCATTTTTCATGGGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR TCA 90 bp | GAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATCTGGTGAAAAGTGGGGGCCCTCACTTTaGCCACCAGATCAGAAGCCA | + |
Preference number: 4 (lower is better) Translates to: ENRSGVDKGFKLVTSGEKWGPSL*PPDQKP Trigger: TGGCTTCTGATCTGGTGGTCAAAGTGAGGGCCCCCA...CTTTTCACCAGATGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
||
CDS-3UTR TCA 90 bp | AGGGAAGACCTCGAGAGCTCACTGTCTCTCCTAGATGCCAAGAATCAATGTGCCAATCTTGGTGAAATTTaGCGTGGCATCCATTGCAAA | + |
Preference number: 4 (lower is better) Translates to: REDLESSLSLLDAKNQCANLGEI*RGIHCK Trigger: TTTGCAATGGATGCCACGTCAAATTTCACCAAGATT...GGCACATTGATTCTTGGCATCTAGGAGAGACAGTGAGCTCTCGAGGTCTTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR TCA 90 bp | ATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCCTGCGTTGTCCAGGTTaGTTTCTGTATGTGTGCCAG | + |
Preference number: 4 (lower is better) Translates to: IRSMAKMQENRSGVDKGFLRCPG*FLYVCQ Trigger: CTGGCACACATACAGAAATCAACCTGGACAACGCAG...GAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | GAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATCTGGTGAAAAGAGGAGCACATTAAGCTaGCCAGGCATTCGGCCCGCA | + |
Preference number: 4 (lower is better) Translates to: ENRSGVDKGFKLVTSGEKRSTLS*PGIRPA Trigger: TGCGGGCCGAATGCCTGGTCAGCTTAATGTGCTCCT...CTTTTCACCAGATGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | ATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCGTCTTCTTGAGCCGCTaGATTCACAGTGTCGTTTGC | + |
Preference number: 4 (lower is better) Translates to: IRSMAKMQENRSGVDKGFVFLSR*IHSVVC Trigger: GCAAACGACACTGTGAATTCAGCGGCTCAAGAAGAC...GAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | CTTTGTCATCAGAGACGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGAGTCGAGCTGTTCCCTaGGTGGAAAGGCCGCCCAGG | + |
Preference number: 4 (lower is better) Translates to: LCHQRRSYITFMNSFITQSRAVP*VERPPR Trigger: CCTGGGCGGCCTTTCCACTCAGGGAACAGCTCGACT...CTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099149.10 |
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CDS-3UTR GCA 90 bp | CTTTGTCATCAGAGACGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGTGCGCCCATCGACTTTaGTGCCCCCGCAGAAGCGAG | + |
Preference number: 4 (lower is better) Translates to: LCHQRRSYITFMNSFITQCAHRL*CPRRSE Trigger: CTCGCTTCTGCGGGGGCAGCAAAGTCGATGGGCGCA...CTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR CCA 90 bp | GAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATCTGGTGAAAAGGGTCATCTGGGAACTTaGAAGCTTCGCCTGCGCCTG | + |
Preference number: 4 (lower is better) Translates to: ENRSGVDKGFKLVTSGEKGHLGT*KLRLRL Trigger: CAGGCGCAGGCGAAGCTTCCAAGTTCCCAGATGACC...CTTTTCACCAGATGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | GCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACAGGTCATCTGGGAACTTaGAAGCTTCGCCTGCGCCTG | + |
Preference number: 4 (lower is better) Translates to: AKMQENRSGVDKGFKLVTGHLGT*KLRLRL Trigger: CAGGCGCAGGCGAAGCTTCCAAGTTCCCAGATGACC...TGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | ATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCTCTGTAGAGGTCATCTaGGAACTTGGAAGCTTCGCC | + |
Preference number: 4 (lower is better) Translates to: IRSMAKMQENRSGVDKGFSVEVI*ELGSFA Trigger: GGCGAAGCTTCCAAGTTCCCAGATGACCTCTACAGA...GAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | GATCTTGAAAATCTCCATTGTTTTGTGAGGCTTCTTTGGGTCTTGAGAGCTTTGACTTCCTTCATCCCTTaGATCTGGGCCCCTGCTGCT | + |
Preference number: 4 (lower is better) Translates to: DLENLHCFVRLLWVLRALTSFIP*IWAPAA Trigger: AGCAGCAGGGGCCCAGATCCAAGGGATGAAGGAAGT...CAAAGCTCTCAAGACCCAAAGAAGCCTCACAAAACAATGGAGATTTTCAAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | GATCTTGAAAATCTCCATTGTTTTGTGAGGCTTCTTTGGGTCTTGAGAGCTTTGCATTCGGCCCGCAACTaGGTGGATTCCAAACCTGAC | + |
Preference number: 4 (lower is better) Translates to: DLENLHCFVRLLWVLRALHSARN*VDSKPD Trigger: GTCAGGTTTGGAATCCACCCAGTTGCGGGCCGAATG...CAAAGCTCTCAAGACCCAAAGAAGCCTCACAAAACAATGGAGATTTTCAAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | GAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATCTGGTGAAAAGCACCACAGTGCCTGGTaGGTACGAAGCGTTCGTACA | + |
Preference number: 4 (lower is better) Translates to: ENRSGVDKGFKLVTSGEKHHSAW*VRSVRT Trigger: TGTACGAACGCTTCGTACTCACCAGGCACTGTGGTG...CTTTTCACCAGATGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | CATTTATTACTCAGATGGTTGCATTCCATTCAAGCGCACTTAATACAGTCCATTTGGGGGCCCTCACTTTaGCCACCAGATCAGAAGCCA | + |
Preference number: 4 (lower is better) Translates to: HLLLRWLHSIQAHLIQSIWGPSL*PPDQKP Trigger: TGGCTTCTGATCTGGTGGTCAAAGTGAGGGCCCCCA...AATGGACTGTATTAAGTGCGCTTGAATGGAATGCAACCATCTGAGTAATAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | GATCTTGAAAATCTCCATTGTTTTGTGAGGCTTCTTTGGGTCTTGAGAGCTTTGAAATCCTCGGACAACTaGGCCCATCGACTTTGCTGC | + |
Preference number: 4 (lower is better) Translates to: DLENLHCFVRLLWVLRALKSSDN*AHRLCC Trigger: GCAGCAAAGTCGATGGGCGCAGTTGTCCGAGGATTT...CAAAGCTCTCAAGACCCAAAGAAGCCTCACAAAACAATGGAGATTTTCAAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | GAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATCTGGTGAAAAGGCAGGTAAGAACTGCTaGCAGCCCCACCAAACTGTG | + |
Preference number: 4 (lower is better) Translates to: ENRSGVDKGFKLVTSGEKAGKNC*QPHQTV Trigger: CACAGTTTGGTGGGGCTGGCAGCAGTTCTTACCTGC...CTTTTCACCAGATGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | GCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACAGCAGGTAAGAACTGCTaGCAGCCCCACCAAACTGTG | + |
Preference number: 4 (lower is better) Translates to: AKMQENRSGVDKGFKLVTAGKNC*QPHQTV Trigger: CACAGTTTGGTGGGGCTGGCAGCAGTTCTTACCTGC...TGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | GATCTTGAAAATCTCCATTGTTTTGTGAGGCTTCTTTGGGTCTTGAGAGCTTTGGATGGTGCCACCCATTaGCATTGCTCCAGACATCTG | + |
Preference number: 4 (lower is better) Translates to: DLENLHCFVRLLWVLRALDGATH*HCSRHL Trigger: CAGATGTCTGGAGCAATGGCAATGGGTGGCACCATC...CAAAGCTCTCAAGACCCAAAGAAGCCTCACAAAACAATGGAGATTTTCAAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | GATCTTGAAAATCTCCATTGTTTTGTGAGGCTTCTTTGGGTCTTGAGAGCTTTGTTCGCGTATCCTCCTTaGCCCTCACCAGATTCCTTC | + |
Preference number: 4 (lower is better) Translates to: DLENLHCFVRLLWVLRALFAYPP*PSPDSF Trigger: GAAGGAATCTGGTGAGGGCCAAGGAGGATACGCGAA...CAAAGCTCTCAAGACCCAAAGAAGCCTCACAAAACAATGGAGATTTTCAAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | ATTTGGCATGATCAATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGTGCCAGAAATTTCCATaGGTTTTCCACCAGCTGTTG | + |
Preference number: 4 (lower is better) Translates to: IWHDQSGVWLRCKRTGQECQKFP*VFHQLL Trigger: CAACAGCTGGTGGAAAACCCATGGAAATTTCTGGCA...CTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGATTGATCATGCCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | AGACCCATGAAAAATGATCTAAGTGTGCACGGTCCTCCACTCTTCTGCCTAACATGCCAGAAATTTCCATaGGTTTTCCACCAGCTGTTG | + |
Preference number: 4 (lower is better) Translates to: RPMKNDLSVHGPPLFCLTCQKFP*VFHQLL Trigger: CAACAGCTGGTGGAAAACCCATGGAAATTTCTGGCA...TGTTAGGCAGAAGAGTGGAGGACCGTGCACACTTAGATCATTTTTCATGGGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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3UTR CAA 72 bp | ACAGCCATTGGGCTCTTCCTCCAAGAGCCCTGTTTTTaGTGCTCCTTGAGACCCATGAAAAATGATCTAAGT | + |
Preference number: 4 (lower is better) Translates to: TAIGLFLQEPCF*CSLRPMKNDLS Trigger: ACTTAGATCATTTTTCATGGGTCTCAAGGAGCACAAAAAACAGGGCTCTTGGAGGAAGAGCCCAATGGCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR TCA 90 bp | GATCTTGAAAATCTCCATTGTTTTGTGAGGCTTCTTTGGGTCTTGAGAGCTTTGCAGCACCAAGGGATTTaGACTGTTCCAAAGCAGCAG | + |
Preference number: 4 (lower is better) Translates to: DLENLHCFVRLLWVLRALQHQGI*TVPKQQ Trigger: CTGCTGCTTTGGAACAGTTCAAATCCCTTGGTGCTG...CAAAGCTCTCAAGACCCAAAGAAGCCTCACAAAACAATGGAGATTTTCAAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | GTGAGGCTTCTTTGGGTCTTGAGAGCTTTGCTCATCTATGAACGCCTCCTTTCTAATCTTGGTGAAATTTaGCGTGGCATCCATTGCAAA | + |
Preference number: 4 (lower is better) Translates to: VRLLWVLRALLIYERLLSNLGEI*RGIHCK Trigger: TTTGCAATGGATGCCACGTCAAATTTCACCAAGATT...AGAAAGGAGGCGTTCATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | GAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATCTGGTGAAAAGTTTTCCACCAGCTGTTaGCGTTGTGCCATAGCCTCC | + |
Preference number: 4 (lower is better) Translates to: ENRSGVDKGFKLVTSGEKFSTSC*RCAIAS Trigger: GGAGGCTATGGCACAACGTCAACAGCTGGTGGAAAA...CTTTTCACCAGATGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | CATTTATTACTCAGATGGTTGCATTCCATTCAAGCGCACTTAATACAGTCCATTTCGGCAATGGGGTACTaGGCTTTAGCAGCACAGAGC | + |
Preference number: 4 (lower is better) Translates to: HLLLRWLHSIQAHLIQSISAMGY*ALAAQS Trigger: GCTCTGTGCTGCTAAAGCTCAGTACCCCATTGCCGA...AATGGACTGTATTAAGTGCGCTTGAATGGAATGCAACCATCTGAGTAATAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | ATAGATTTTAGGCAGGGATGGAGCCATGATAAAGAGTGGGAGGAAGTAAAATTCAACACAGCACAAGCCTaGGCCCAGGTACATGATTTC | + |
Preference number: 4 (lower is better) Translates to: IDFRQGWSHDKEWEEVKFNTAQA*AQVHDF Trigger: GAAATCATGTACCTGGGCTCAGGCTTGTGCTGTGTT...GAATTTTACTTCCTCCCACTCTTTATCATGGCTCCATCCCTGCCTAAAATCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR GCA 90 bp | GAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATCTGGTGAAAAGCCCCGCAGGAGACAATaGAACTCGCTTCTCGTTTTG | + |
Preference number: 4 (lower is better) Translates to: ENRSGVDKGFKLVTSGEKPRRRQ*NSLLVL Trigger: CAAAACGAGAAGCGAGTTGCATTGTCTCCTGCGGGG...CTTTTCACCAGATGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | GAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATCTGGTGAAAAGCATGAGAGTAGAGAGTaGGGACACAGAGCCCAGACA | + |
Preference number: 4 (lower is better) Translates to: ENRSGVDKGFKLVTSGEKHESRE*GHRAQT Trigger: TGTCTGGGCTCTGTGTCCGCACTCTCTACTCTCATG...CTTTTCACCAGATGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | CTTTGTCATCAGAGACGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGGGTCATCTGGGAACTTaGAAGCTTCGCCTGCGCCTG | + |
Preference number: 4 (lower is better) Translates to: LCHQRRSYITFMNSFITQGHLGT*KLRLRL Trigger: CAGGCGCAGGCGAAGCTTCCAAGTTCCCAGATGACC...CTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR CCA 90 bp | GATCTTGAAAATCTCCATTGTTTTGTGAGGCTTCTTTGGGTCTTGAGAGCTTTGAGCTATTGTCACTCTTaGAACCTGGTCCATCGCCAG | + |
Preference number: 4 (lower is better) Translates to: DLENLHCFVRLLWVLRALSYCHS*NLVHRQ Trigger: CTGGCGATGGACCAGGTTCCAAGAGTGACAATAGCT...CAAAGCTCTCAAGACCCAAAGAAGCCTCACAAAACAATGGAGATTTTCAAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | GAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATCTGGTGAAAAGCGGCCCGCAACTGGGTaGATTCCAAACCTGACTTTT | + |
Preference number: 4 (lower is better) Translates to: ENRSGVDKGFKLVTSGEKRPATG*IPNLTF Trigger: AAAAGTCAGGTTTGGAATCCACCCAGTTGCGGGCCG...CTTTTCACCAGATGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | CATTTATTACTCAGATGGTTGCATTCCATTCAAGCGCACTTAATACAGTCCATTTGTTGGCCATGGAACTaGGAGCATCATAGCCCTGAG | + |
Preference number: 4 (lower is better) Translates to: HLLLRWLHSIQAHLIQSICWPWN*EHHSPE Trigger: CTCAGGGCTATGATGCTCTCAGTTCCATGGCCAACA...AATGGACTGTATTAAGTGCGCTTGAATGGAATGCAACCATCTGAGTAATAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | ATTTGGCATGATCAATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGAATCTTGGTGAAATTTaGCGTGGCATCCATTGCAAA | + |
Preference number: 4 (lower is better) Translates to: IWHDQSGVWLRCKRTGQENLGEI*RGIHCK Trigger: TTTGCAATGGATGCCACGTCAAATTTCACCAAGATT...CTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGATTGATCATGCCAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | CTTTGTCATCAGAGACGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGTCGGCAATGGGGTACTaGGCTTTAGCAGCACAGAGC | + |
Preference number: 4 (lower is better) Translates to: LCHQRRSYITFMNSFITQSAMGY*ALAAQS Trigger: GCTCTGTGCTGCTAAAGCTCAGTACCCCATTGCCGA...CTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR TCA 90 bp | GCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACAGTCTTCTTGAGCCGCTaGATTCACAGTGTCGTTTGC | + |
Preference number: 4 (lower is better) Translates to: AKMQENRSGVDKGFKLVTVFLSR*IHSVVC Trigger: GCAAACGACACTGTGAATTCAGCGGCTCAAGAAGAC...TGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | AACCATTTAATGTTAGCTCTTTGTCATCAGAGACGAAGCTACATCACTTTTATGGGTCCGTGGGTCGCTTaGACATGTCCAGCATTCTCT | + |
Preference number: 4 (lower is better) Translates to: NHLMLALCHQRRSYITFMGPWVA*TCPAFS Trigger: AGAGAATGCTGGACATGTTCAAGCGACCCACGGACC...CATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAGAGCTAACATTAAATGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099149.10 |
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CDS-3UTR TCA 90 bp | GAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATCTGGTGAAAAGAACACAGCACAAGCCTaGGCCCAGGTACATGATTTC | + |
Preference number: 4 (lower is better) Translates to: ENRSGVDKGFKLVTSGEKNTAQA*AQVHDF Trigger: GAAATCATGTACCTGGGCTCAGGCTTGTGCTGTGTT...CTTTTCACCAGATGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | AACCATTTAATGTTAGCTCTTTGTCATCAGAGACGAAGCTACATCACTTTTATGGCAGGTAAGAACTGCTaGCAGCCCCACCAAACTGTG | + |
Preference number: 4 (lower is better) Translates to: NHLMLALCHQRRSYITFMAGKNC*QPHQTV Trigger: CACAGTTTGGTGGGGCTGGCAGCAGTTCTTACCTGC...CATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAGAGCTAACATTAAATGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR GCA 90 bp | CATTTATTACTCAGATGGTTGCATTCCATTCAAGCGCACTTAATACAGTCCATTTCCCGAACTTTGGCCTaGAGAGCGTCACATGTCTTC | + |
Preference number: 4 (lower is better) Translates to: HLLLRWLHSIQAHLIQSISRTLA*RASHVF Trigger: GAAGACATGTGACGCTCTGCAGGCCAAAGTTCGGGA...AATGGACTGTATTAAGTGCGCTTGAATGGAATGCAACCATCTGAGTAATAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | GTGGACAAAATACTCTTGCTTTTTGGGCAATGGCGACAGTACATAGGTAGGCGACTTATATGGAATTCCTaGCTTTACCGGGGATTTACA | + |
Preference number: 4 (lower is better) Translates to: VDKILLLFGQWRQYIGRRLIWNS*LYRGFT Trigger: TGTAAATCCCCGGTAAAGCCAGGAATTCCATATAAG...TCGCCTACCTATGTACTGTCGCCATTGCCCAAAAAGCAAGAGTATTTTGTCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | GTGGACAAAATACTCTTGCTTTTTGGGCAATGGCGACAGTACATAGGTAGGCGATTTATTGAGCAAGTCTaGATTTTGGGCTGGGTAGAT | + |
Preference number: 4 (lower is better) Translates to: VDKILLLFGQWRQYIGRRFIEQV*ILGWVD Trigger: ATCTACCCAGCCCAAAATCCAGACTTGCTCAATAAA...TCGCCTACCTATGTACTGTCGCCATTGCCCAAAAAGCAAGAGTATTTTGTCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | AGACCCATGAAAAATGATCTAAGTGTGCACGGTCCTCCACTCTTCTGCCTAACATTTATTGAGCAAGTCTaGATTTTGGGCTGGGTAGAT | + |
Preference number: 4 (lower is better) Translates to: RPMKNDLSVHGPPLFCLTFIEQV*ILGWVD Trigger: ATCTACCCAGCCCAAAATCCAGACTTGCTCAATAAA...TGTTAGGCAGAAGAGTGGAGGACCGTGCACACTTAGATCATTTTTCATGGGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CCA 90 bp | CATTTATTACTCAGATGGTTGCATTCCATTCAAGCGCACTTAATACAGTCCATTGTCACTCTTGGAACCTaGTCCATCGCCAGAACTGTG | + |
Preference number: 4 (lower is better) Translates to: HLLLRWLHSIQAHLIQSIVTLGT*SIARTV Trigger: CACAGTTCTGGCGATGGACCAGGTTCCAAGAGTGAC...AATGGACTGTATTAAGTGCGCTTGAATGGAATGCAACCATCTGAGTAATAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | GCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACAAGCTATTGTCACTCTTaGAACCTGGTCCATCGCCAG | + |
Preference number: 4 (lower is better) Translates to: AKMQENRSGVDKGFKLVTSYCHS*NLVHRQ Trigger: CTGGCGATGGACCAGGTTCCAAGAGTGACAATAGCT...TGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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3UTR CAA 72 bp | GAAAATCTCCATTGTTTTGTGAGGCTTCTTTGGGTCTaGAGAGCTTTGCTCATCTATGAACGCCTCCTTTCT | + |
Preference number: 4 (lower is better) Translates to: ENLHCFVRLLWV*RALLIYERLLS Trigger: AGAAAGGAGGCGTTCATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCTCACAAAACAATGGAGATTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | AACCATTTAATGTTAGCTCTTTGTCATCAGAGACGAAGCTACATCACTTTTATGTGTTGGCCATGGAACTaGGAGCATCATAGCCCTGAG | + |
Preference number: 4 (lower is better) Translates to: NHLMLALCHQRRSYITFMCWPWN*EHHSPE Trigger: CTCAGGGCTATGATGCTCTCAGTTCCATGGCCAACA...CATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAGAGCTAACATTAAATGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR TCA 90 bp | AGACCCATGAAAAATGATCTAAGTGTGCACGGTCCTCCACTCTTCTGCCTAACATCATTTCAGCTTCAATaGACTCTTTGGACATCTCTT | + |
Preference number: 4 (lower is better) Translates to: RPMKNDLSVHGPPLFCLTSFQLQ*TLWTSL Trigger: AAGAGATGTCCAAAGAGTTCATTGAAGCTGAAATGA...TGTTAGGCAGAAGAGTGGAGGACCGTGCACACTTAGATCATTTTTCATGGGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR TCA 90 bp | ATTTGGCATGATCAATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGTCATTTCAGCTTCAATaGACTCTTTGGACATCTCTT | + |
Preference number: 4 (lower is better) Translates to: IWHDQSGVWLRCKRTGQESFQLQ*TLWTSL Trigger: AAGAGATGTCCAAAGAGTTCATTGAAGCTGAAATGA...CTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGATTGATCATGCCAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
||
CDS-3UTR TCA 90 bp | ATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCAATCTTGGTGAAATTTaGCGTGGCATCCATTGCAAA | + |
Preference number: 4 (lower is better) Translates to: IRSMAKMQENRSGVDKGFNLGEI*RGIHCK Trigger: TTTGCAATGGATGCCACGTCAAATTTCACCAAGATT...GAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | AACCATTTAATGTTAGCTCTTTGTCATCAGAGACGAAGCTACATCACTTTTATGTTTTCCACCAGCTGTTaGCGTTGTGCCATAGCCTCC | + |
Preference number: 4 (lower is better) Translates to: NHLMLALCHQRRSYITFMFSTSC*RCAIAS Trigger: GGAGGCTATGGCACAACGTCAACAGCTGGTGGAAAA...CATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAGAGCTAACATTAAATGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR TCA 90 bp | ATTTGGCATGATCAATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGCTGGAAAATCACTGTTaGTCTCATCCATTTCTAACA | + |
Preference number: 4 (lower is better) Translates to: IWHDQSGVWLRCKRTGQELENHC*SHPFLT Trigger: TGTTAGAAATGGATGAGATCAACAGTGATTTTCCAG...CTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGATTGATCATGCCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | GAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATCTGGTGAAAAGTGTCGTTTGCTCCAATaGCAAGAACCAAGTCGGTGT | + |
Preference number: 4 (lower is better) Translates to: ENRSGVDKGFKLVTSGEKCRLLQ*QEPSRC Trigger: ACACCGACTTGGTTCTTGTCATTGGAGCAAACGACA...CTTTTCACCAGATGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
||
CDS-3UTR TCA 90 bp | GCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACAATGTCCAGCATTCTCTaGGTCACCAGAAAACCACCT | + |
Preference number: 4 (lower is better) Translates to: AKMQENRSGVDKGFKLVTMSSIL*VTRKPP Trigger: AGGTGGTTTTCTGGTGACTCAGAGAATGCTGGACAT...TGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | CGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGATGGTTGCATTCCATCCCCGCAGGAGACAATaGAACTCGCTTCTCGTTTTG | + |
Preference number: 4 (lower is better) Translates to: RSYITFMNSFITQMVAFHPRRRQ*NSLLVL Trigger: CAAAACGAGAAGCGAGTTGCATTGTCTCCTGCGGGG...ATGGAATGCAACCATCTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR GCA 90 bp | AACCATTTAATGTTAGCTCTTTGTCATCAGAGACGAAGCTACATCACTTTTATGAAATCCTCGGACAACTaGGCCCATCGACTTTGCTGC | + |
Preference number: 4 (lower is better) Translates to: NHLMLALCHQRRSYITFMKSSDN*AHRLCC Trigger: GCAGCAAAGTCGATGGGCGCAGTTGTCCGAGGATTT...CATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAGAGCTAACATTAAATGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR GCA 90 bp | CTTTGTCATCAGAGACGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGCATGAGAGTAGAGAGTaGGGACACAGAGCCCAGACA | + |
Preference number: 4 (lower is better) Translates to: LCHQRRSYITFMNSFITQHESRE*GHRAQT Trigger: TGTCTGGGCTCTGTGTCCGCACTCTCTACTCTCATG...CTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR GCA 90 bp | CTTTGTCATCAGAGACGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGTCCCGAACTTTGGCCTaGAGAGCGTCACATGTCTTC | + |
Preference number: 4 (lower is better) Translates to: LCHQRRSYITFMNSFITQSRTLA*RASHVF Trigger: GAAGACATGTGACGCTCTGCAGGCCAAAGTTCGGGA...CTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR CCA 90 bp | CATTTATTACTCAGATGGTTGCATTCCATTCAAGCGCACTTAATACAGTCCATTTCTGTAGAGGTCATCTaGGAACTTGGAAGCTTCGCC | + |
Preference number: 4 (lower is better) Translates to: HLLLRWLHSIQAHLIQSISVEVI*ELGSFA Trigger: GGCGAAGCTTCCAAGTTCCCAGATGACCTCTACAGA...AATGGACTGTATTAAGTGCGCTTGAATGGAATGCAACCATCTGAGTAATAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | ATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCTTTATTGAGCAAGTCTaGATTTTGGGCTGGGTAGAT | + |
Preference number: 4 (lower is better) Translates to: IRSMAKMQENRSGVDKGFFIEQV*ILGWVD Trigger: ATCTACCCAGCCCAAAATCCAGACTTGCTCAATAAA...GAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | AACCATTTAATGTTAGCTCTTTGTCATCAGAGACGAAGCTACATCACTTTTATGGTCACTCTTGGAACCTaGTCCATCGCCAGAACTGTG | + |
Preference number: 4 (lower is better) Translates to: NHLMLALCHQRRSYITFMVTLGT*SIARTV Trigger: CACAGTTCTGGCGATGGACCAGGTTCCAAGAGTGAC...CATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAGAGCTAACATTAAATGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR CCA 90 bp | AACCATTTAATGTTAGCTCTTTGTCATCAGAGACGAAGCTACATCACTTTTATGTTCGCGTATCCTCCTTaGCCCTCACCAGATTCCTTC | + |
Preference number: 4 (lower is better) Translates to: NHLMLALCHQRRSYITFMFAYPP*PSPDSF Trigger: GAAGGAATCTGGTGAGGGCCAAGGAGGATACGCGAA...CATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAGAGCTAACATTAAATGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR CCA 90 bp | CTTTGTCATCAGAGACGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGCGGCCCGCAACTGGGTaGATTCCAAACCTGACTTTT | + |
Preference number: 4 (lower is better) Translates to: LCHQRRSYITFMNSFITQRPATG*IPNLTF Trigger: AAAAGTCAGGTTTGGAATCCACCCAGTTGCGGGCCG...CTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR TCA 90 bp | CGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGATGGTTGCATTCCATCAGCACCAAGGGATTTaGACTGTTCCAAAGCAGCAG | + |
Preference number: 4 (lower is better) Translates to: RSYITFMNSFITQMVAFHQHQGI*TVPKQQ Trigger: CTGCTGCTTTGGAACAGTTCAAATCCCTTGGTGCTG...ATGGAATGCAACCATCTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR TCA 90 bp | CATTTATTACTCAGATGGTTGCATTCCATTCAAGCGCACTTAATACAGTCCATTTGTCGTTTGCTCCAATaGCAAGAACCAAGTCGGTGT | + |
Preference number: 4 (lower is better) Translates to: HLLLRWLHSIQAHLIQSICRLLQ*QEPSRC Trigger: ACACCGACTTGGTTCTTGTCATTGGAGCAAACGACA...AATGGACTGTATTAAGTGCGCTTGAATGGAATGCAACCATCTGAGTAATAAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR GCA 90 bp | CGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGATGGTTGCATTCCATGGATGTCCACCTCCTTaGACTGTTGAGCAAAGAGCT | + |
Preference number: 4 (lower is better) Translates to: RSYITFMNSFITQMVAFHGCPPP*TVEQRA Trigger: AGCTCTTTGCTCAACAGTGCAAGGAGGTGGACATCC...ATGGAATGCAACCATCTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR CCA 90 bp | GAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATCTGGTGAAAAGTTTGGAAAATCTCCTTaGGGACCCCAACTGTCAACT | + |
Preference number: 4 (lower is better) Translates to: ENRSGVDKGFKLVTSGEKFGKSP*GPQLST Trigger: AGTTGACAGTTGGGGTCCCCAAGGAGATTTTCCAAA...CTTTTCACCAGATGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | GCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATTTGGAAAATCTCCTTaGGGACCCCAACTGTCAACT | + |
Preference number: 4 (lower is better) Translates to: AKMQENRSGVDKGFKLVTFGKSP*GPQLST Trigger: AGTTGACAGTTGGGGTCCCCAAGGAGATTTTCCAAA...TGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | GCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATGTCAACTGCTTATATaGAATTCCTGGCTTTACCGG | + |
Preference number: 4 (lower is better) Translates to: AKMQENRSGVDKGFKLVTCQLLI*NSWLYR Trigger: CCGGTAAAGCCAGGAATTCCATATAAGCAGTTGACA...TGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | GCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACACTTATATGGAATTCCTaGCTTTACCGGGGATTTACA | + |
Preference number: 4 (lower is better) Translates to: AKMQENRSGVDKGFKLVTLIWNS*LYRGFT Trigger: TGTAAATCCCCGGTAAAGCCAGGAATTCCATATAAG...TGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | CGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGATGGTTGCATTCCATTTTGGAAAATCTCCTTaGGGACCCCAACTGTCAACT | + |
Preference number: 4 (lower is better) Translates to: RSYITFMNSFITQMVAFHFGKSP*GPQLST Trigger: AGTTGACAGTTGGGGTCCCCAAGGAGATTTTCCAAA...ATGGAATGCAACCATCTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR CCA 90 bp | CGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGATGGTTGCATTCCATTGCCAGAAATTTCCATaGGTTTTCCACCAGCTGTTG | + |
Preference number: 4 (lower is better) Translates to: RSYITFMNSFITQMVAFHCQKFP*VFHQLL Trigger: CAACAGCTGGTGGAAAACCCATGGAAATTTCTGGCA...ATGGAATGCAACCATCTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR TCA 90 bp | GAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATCTGGTGAAAAGTCATTTCAGCTTCAATaGACTCTTTGGACATCTCTT | + |
Preference number: 4 (lower is better) Translates to: ENRSGVDKGFKLVTSGEKSFQLQ*TLWTSL Trigger: AAGAGATGTCCAAAGAGTTCATTGAAGCTGAAATGA...CTTTTCACCAGATGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | CATTTATTACTCAGATGGTTGCATTCCATTCAAGCGCACTTAATACAGTCCATTCTTATATGGAATTCCTaGCTTTACCGGGGATTTACA | + |
Preference number: 4 (lower is better) Translates to: HLLLRWLHSIQAHLIQSILIWNS*LYRGFT Trigger: TGTAAATCCCCGGTAAAGCCAGGAATTCCATATAAG...AATGGACTGTATTAAGTGCGCTTGAATGGAATGCAACCATCTGAGTAATAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CCA 90 bp | CATTTATTACTCAGATGGTTGCATTCCATTCAAGCGCACTTAATACAGTCCATTTTTATTGAGCAAGTCTaGATTTTGGGCTGGGTAGAT | + |
Preference number: 4 (lower is better) Translates to: HLLLRWLHSIQAHLIQSIFIEQV*ILGWVD Trigger: ATCTACCCAGCCCAAAATCCAGACTTGCTCAATAAA...AATGGACTGTATTAAGTGCGCTTGAATGGAATGCAACCATCTGAGTAATAAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | CATTTATTACTCAGATGGTTGCATTCCATTCAAGCGCACTTAATACAGTCCATTCTGGAAAATCACTGTTaGTCTCATCCATTTCTAACA | + |
Preference number: 4 (lower is better) Translates to: HLLLRWLHSIQAHLIQSILENHC*SHPFLT Trigger: TGTTAGAAATGGATGAGATCAACAGTGATTTTCCAG...AATGGACTGTATTAAGTGCGCTTGAATGGAATGCAACCATCTGAGTAATAAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR TCA 90 bp | CGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGATGGTTGCATTCCATTCATTTCAGCTTCAATaGACTCTTTGGACATCTCTT | + |
Preference number: 4 (lower is better) Translates to: RSYITFMNSFITQMVAFHSFQLQ*TLWTSL Trigger: AAGAGATGTCCAAAGAGTTCATTGAAGCTGAAATGA...ATGGAATGCAACCATCTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS GCA 90 bp | GGGTGGCTGCCAGGCCTCCTGCAACCCCGATCATGCCCAAGGCATTaGCGAGTCGAGCTGTTCCCTGAGTGGAAAGGCCGCCCAGGGCCC | + |
Preference number: 5 (lower is better) Translates to: GWLPGLLQPRSCPRH*RVELFPEWKGRPGP Trigger: GGGCCCTGGGCGGCCTTTCCACTCAGGGAACAGCTCGACTCGGCAATGCCTTGGGCATGATCGGGGTTGCAGGAGGCCTGGCAGCCACCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS GCA 90 bp | CTGCGGGTCCGGCTTCAGGCCTCCAAGGGTGGCTGCCAGGCCTCCTaGAACCCCGATCATGCCCAAGGCATTGCCGAGTCGAGCTGTTCC | + |
Preference number: 5 (lower is better) Translates to: LRVRLQASKGGCQAS*NPDHAQGIAESSCS Trigger: GGAACAGCTCGACTCGGCAATGCCTTGGGCATGATCGGGGTTGCAGGAGGCCTGGCAGCCACCCTTGGAGGCCTGAAGCCGGACCCGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS CCA 90 bp | CCCCGATCATGCCCAAGGCATTGCCGAGTCGAGCTGTTCCCTGAGTaGAAAGGCCGCCCAGGGCCCCAACACAGCACAAGCCTGAGCCCA | + |
Preference number: 5 (lower is better) Translates to: PRSCPRHCRVELFPE*KGRPGPQHSTSLSP Trigger: TGGGCTCAGGCTTGTGCTGTGTTGGGGCCCTGGGCGGCCTTTCCACTCAGGGAACAGCTCGACTCGGCAATGCCTTGGGCATGATCGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS TCA 90 bp | GCAACCCCGATCATGCCCAAGGCATTGCCGAGTCGAGCTGTTCCCTaGGTGGAAAGGCCGCCCAGGGCCCCAACACAGCACAAGCCTGAG | + |
Preference number: 5 (lower is better) Translates to: ATPIMPKALPSRAVP*VERPPRAPTQHKPE Trigger: CTCAGGCTTGTGCTGTGTTGGGGCCCTGGGCGGCCTTTCCACTCAGGGAACAGCTCGACTCGGCAATGCCTTGGGCATGATCGGGGTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS GCA 90 bp | TCAGGCCTCCAAGGGTGGCTGCCAGGCCTCCTGCAACCCCGATCATaGCCAAGGCATTGCCGAGTCGAGCTGTTCCCTGAGTGGAAAGGC | + |
Preference number: 5 (lower is better) Translates to: SGLQGWLPGLLQPRS*PRHCRVELFPEWKG Trigger: GCCTTTCCACTCAGGGAACAGCTCGACTCGGCAATGCCTTGGGCATGATCGGGGTTGCAGGAGGCCTGGCAGCCACCCTTGGAGGCCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS CCA 90 bp | ACATCTGAGCTAACAGCTGCGGGTCCGGCTTCAGGCCTCCAAGGGTaGCTGCCAGGCCTCCTGCAACCCCGATCATGCCCAAGGCATTGC | + |
Preference number: 5 (lower is better) Translates to: TSELTAAGPASGLQG*LPGLLQPRSCPRHC Trigger: GCAATGCCTTGGGCATGATCGGGGTTGCAGGAGGCCTGGCAGCCACCCTTGGAGGCCTGAAGCCGGACCCGCAGCTGTTAGCTCAGATGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS TCA 90 bp | ATCGTCAGGCCGATGGTGCCACCCATTGCCATTGCTCCAGACATCTaGGCTAACAGCTGCGGGTCCGGCTTCAGGCCTCCAAGGGTGGCT | + |
Preference number: 5 (lower is better) Translates to: IVRPMVPPIAIAPDI*ANSCGSGFRPPRVA Trigger: AGCCACCCTTGGAGGCCTGAAGCCGGACCCGCAGCTGTTAGCTCAGATGTCTGGAGCAATGGCAATGGGTGGCACCATCGGCCTGACGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS GCA 90 bp | TTGGAAGCTTCGCCTGCGCCTGATTCCACGACAACATTGAAGCCCTaGTTGACCAGGGCCTGGACCCCCGCAGGAGACAATGCAACTCGC | + |
Preference number: 5 (lower is better) Translates to: LEASPAPDSTTTLKP*LTRAWTPAGDNATR Trigger: GCGAGTTGCATTGTCTCCTGCGGGGGTCCAGGCCCTGGTCAAGCAGGGCTTCAATGTTGTCGTGGAATCAGGCGCAGGCGAAGCTTCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS GCA 90 bp | AGCCAGGGAGCGGTTCATGGCCACACACATGATGTACGACAGGATTaGACCAGAGGAGCCGATGAGCGCGCCCACGATGGTCAGCAGGTT | + |
Preference number: 5 (lower is better) Translates to: SQGAVHGHTHDVRQD*TRGADERAHDGQQV Trigger: AACCTGCTGACCATCGTGGGCGCGCTCATCGGCTCCTCTGGTGCAATCCTGTCGTACATCATGTGTGTGGCCATGAACCGCTCCCTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | CAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGAGTTTGGAGGCTTCGCCAGCAGGCCTGCATaGAGTGCGTGCCTTCCAGGG | + |
Preference number: 5 (lower is better) Translates to: QGSKGKWQQQQRCEFGGFASRPA*SACLPG Trigger: CCCTGGAAGGCACGCACTCAATGCAGGCCTGCTGGC...GAAGCCTCCAAACTCACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CAA 90 bp | CAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGAGTTTGGAGGCTTCACATTGAAGCCCTGCTaGACCAGGGCCTGGACCCCC | + |
Preference number: 5 (lower is better) Translates to: QGSKGKWQQQQRCEFGGFTLKPC*TRAWTP Trigger: GGGGGTCCAGGCCCTGGTCAAGCAGGGCTTCAATGT...GAAGCCTCCAAACTCACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS CCA 90 bp | GCCCAGACAGGTGATGCCCGTGGTAAAGCTAGGGTCAGCCATAAATaGGATTATCCCACCCACGCTAGCAGCCAGCAGGCCTGCATTGAG | + |
Preference number: 5 (lower is better) Translates to: AQTGDARGKARVSHK*DYPTHASSQQACIE Trigger: CTCAATGCAGGCCTGCTGGCTGCTAGCGTGGGTGGGATAATCCCATTTATGGCTGACCCTAGCTTTACCACGGGCATCACCTGTCTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | CTCCCAAGAACACGCAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGAGGTCATCTGGGAACTaGGAAGCTTCGCCTGCGCCT | + |
Preference number: 5 (lower is better) Translates to: LPRTRKAQKASGSNSSAVRSSGN*EASPAP Trigger: AGGCGCAGGCGAAGCTTCCAAGTTCCCAGATGACCT...CACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTCTTGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CAA 90 bp | AGGGAAGACCTCGAGAGCTCACTGTCTCTCCTAGATGCCAAGAATCAATGTGCCCTGCGCCCATCGACTTaGCTGCCCCCGCAGAAGCGA | + |
Preference number: 5 (lower is better) Translates to: REDLESSLSLLDAKNQCALRPST*LPPQKR Trigger: TCGCTTCTGCGGGGGCAGCAAAGTCGATGGGCGCAG...GGCACATTGATTCTTGGCATCTAGGAGAGACAGTGAGCTCTCGAGGTCTTCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CAA 90 bp | TTGCTCATCTATGAACGCCTCCTTTCTCTGTTCCTGCAACCGAAGGCATCGGCTGCCAGCAGGCCTGCATaGAGTGCGTGCCTTCCAGGG | + |
Preference number: 5 (lower is better) Translates to: LLIYERLLSLFLQPKASAASRPA*SACLPG Trigger: CCCTGGAAGGCACGCACTCAATGCAGGCCTGCTGGC...AGCCGATGCCTTCGGTTGCAGGAACAGAGAAAGGAGGCGTTCATAGATGAGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS TCA 90 bp | TGCTCTGTAGAGGTCATCTGGGAACTTGGAAGCTTCGCCTGCGCCTaGTTCCACGACAACATTGAAGCCCTGCTTGACCAGGGCCTGGAC | + |
Preference number: 5 (lower is better) Translates to: CSVEVIWELGSFACA*FHDNIEALLDQGLD Trigger: GTCCAGGCCCTGGTCAAGCAGGGCTTCAATGTTGTCGTGGAATCAGGCGCAGGCGAAGCTTCCAAGTTCCCAGATGACCTCTACAGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS GCA 90 bp | ATCAGAAGCCAGAACTTCCTTCATCCCTTGGATCTGGGCCCCTGCTaGTCTGTAGAGGTCATCTGGGAACTTGGAAGCTTCGCCTGCGCC | + |
Preference number: 5 (lower is better) Translates to: IRSQNFLHPLDLGPC*SVEVIWELGSFACA Trigger: GGCGCAGGCGAAGCTTCCAAGTTCCCAGATGACCTCTACAGAGCAGCAGGGGCCCAGATCCAAGGGATGAAGGAAGTTCTGGCTTCTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS GCA 90 bp | GAACTGTTCCAAAGCAGCAGCTCTTGTATCAAATCCTCGGACAACTaGGCCCATCGACTTTGCTGCCCCCGCAGAAGCGAGCCCAGCAAC | + |
Preference number: 5 (lower is better) Translates to: ELFQSSSSCIKSSDN*AHRLCCPRRSEPSN Trigger: GTTGCTGGGCTCGCTTCTGCGGGGGCAGCAAAGTCGATGGGCGCAGTTGTCCGAGGATTTGATACAAGAGCTGCTGCTTTGGAACAGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS GCA 90 bp | GCAAGTCGGAAATCTGGATCCGCTTTGCGATCGTCAGGCCGATGGTaGCACCCATTGCCATTGCTCCAGACATCTGAGCTAACAGCTGCG | + |
Preference number: 5 (lower is better) Translates to: ASRKSGSALRSSGRW*HPLPLLQTSELTAA Trigger: CGCAGCTGTTAGCTCAGATGTCTGGAGCAATGGCAATGGGTGGCACCATCGGCCTGACGATCGCAAAGCGGATCCAGATTTCCGACTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS GCA 90 bp | GAAAGCAGCGACCAACTGAGGCAAGTCGGAAATCTGGATCCGCTTTaGGATCGTCAGGCCGATGGTGCCACCCATTGCCATTGCTCCAGA | + |
Preference number: 5 (lower is better) Translates to: ESSDQLRQVGNLDPL*DRQADGATHCHCSR Trigger: TCTGGAGCAATGGCAATGGGTGGCACCATCGGCCTGACGATCGCAAAGCGGATCCAGATTTCCGACTTGCCTCAGTTGGTCGCTGCTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS CCA 90 bp | GCGCCTGATTCCACGACAACATTGAAGCCCTGCTTGACCAGGGCCTaGACCCCCGCAGGAGACAATGCAACTCGCTTCTCGTTTTGGAAA | + |
Preference number: 5 (lower is better) Translates to: APDSTTTLKPCLTRA*TPAGDNATRFSFWK Trigger: TTTCCAAAACGAGAAGCGAGTTGCATTGTCTCCTGCGGGGGTCCAGGCCCTGGTCAAGCAGGGCTTCAATGTTGTCGTGGAATCAGGCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | CCAAGAACACGCAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGAGTATGGGGGCCCTCACTTaGACCACCAGATCAGAAGCC | + |
Preference number: 5 (lower is better) Translates to: PRTRKAQKASGSNSSAVSMGALT*TTRSEA Trigger: GGCTTCTGATCTGGTGGTCAAAGTGAGGGCCCCCAT...ACTCACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTCTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS CCA 90 bp | GAGGCAAGTCGGAAATCTGGATCCGCTTTGCGATCGTCAGGCCGATaGTGCCACCCATTGCCATTGCTCCAGACATCTGAGCTAACAGCT | + |
Preference number: 5 (lower is better) Translates to: EASRKSGSALRSSGR*CHPLPLLQTSELTA Trigger: AGCTGTTAGCTCAGATGTCTGGAGCAATGGCAATGGGTGGCACCATCGGCCTGACGATCGCAAAGCGGATCCAGATTTCCGACTTGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | CGCTGTGAGTTTGGAGGCTTCTTGACAGCCTCGTCTCTTCCCCTAGGGTCACTTCGATGGTGCCACCCATaGCCATTGCTCCAGACATCT | + |
Preference number: 5 (lower is better) Translates to: RCEFGGFLTASSLPLGSLRWCHP*PLLQTS Trigger: AGATGTCTGGAGCAATGGCAATGGGTGGCACCATCG...AAGTGACCCTAGGGGAAGAGACGAGGCTGTCAAGAAGCCTCCAAACTCACAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS CCA 90 bp | CTGAGGCAAGTCGGAAATCTGGATCCGCTTTGCGATCGTCAGGCCTaGAATCAGAGCTGTGCTGATAAGGATGTCCACCTCCTTGCACTG | + |
Preference number: 5 (lower is better) Translates to: LRQVGNLDPLCDRQA*NQSCADKDVHLLAL Trigger: CAGTGCAAGGAGGTGGACATCCTTATCAGCACAGCTCTGATTCCAGGCCTGACGATCGCAAAGCGGATCCAGATTTCCGACTTGCCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069902.13 |
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CDS-3UTR CAA 90 bp | CAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGAGTTTGGAGGCTTCGATTCCACGACAACATaGAAGCCCTGCTTGACCAGG | + |
Preference number: 5 (lower is better) Translates to: QGSKGKWQQQQRCEFGGFDSTTT*KPCLTR Trigger: CCTGGTCAAGCAGGGCTTCAATGTTGTCGTGGAATC...GAAGCCTCCAAACTCACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CAA 90 bp | CGCTGTGAGTTTGGAGGCTTCTTGACAGCCTCGTCTCTTCCCCTAGGGTCACTTGAGCTATTGTCACTCTaGGAACCTGGTCCATCGCCA | + |
Preference number: 5 (lower is better) Translates to: RCEFGGFLTASSLPLGSLELLSL*EPGPSP Trigger: TGGCGATGGACCAGGTTCCAAGAGTGACAATAGCTC...AAGTGACCCTAGGGGAAGAGACGAGGCTGTCAAGAAGCCTCCAAACTCACAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CAA 90 bp | GTGGACAAAATACTCTTGCTTTTTGGGCAATGGCGACAGTACATAGGTAGGCGACTGCGCCCATCGACTTaGCTGCCCCCGCAGAAGCGA | + |
Preference number: 5 (lower is better) Translates to: VDKILLLFGQWRQYIGRRLRPST*LPPQKR Trigger: TCGCTTCTGCGGGGGCAGCAAAGTCGATGGGCGCAG...TCGCCTACCTATGTACTGTCGCCATTGCCCAAAAAGCAAGAGTATTTTGTCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | CGCTGTGAGTTTGGAGGCTTCTTGACAGCCTCGTCTCTTCCCCTAGGGTCACTTTTTCGCGTATCCTCCTaGGCCCTCACCAGATTCCTT | + |
Preference number: 5 (lower is better) Translates to: RCEFGGFLTASSLPLGSLFRVSS*ALTRFL Trigger: AAGGAATCTGGTGAGGGCCAAGGAGGATACGCGAAA...AAGTGACCCTAGGGGAAGAGACGAGGCTGTCAAGAAGCCTCCAAACTCACAGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CAA 90 bp | TTGCTCATCTATGAACGCCTCCTTTCTCTGTTCCTGCAACCGAAGGCATCGGCTGTCAGCAGGTTGTTGTaGAGCAGGAAGCCCTCGGCA | + |
Preference number: 5 (lower is better) Translates to: LLIYERLLSLFLQPKASAVSRLL*SRKPSA Trigger: TGCCGAGGGCTTCCTGCTCAACAACAACCTGCTGAC...AGCCGATGCCTTCGGTTGCAGGAACAGAGAAAGGAGGCGTTCATAGATGAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | TTGCTCATCTATGAACGCCTCCTTTCTCTGTTCCTGCAACCGAAGGCATCGGCTGGGTCCGTGGGTCGCTaGAACATGTCCAGCATTCTC | + |
Preference number: 5 (lower is better) Translates to: LLIYERLLSLFLQPKASAGSVGR*NMSSIL Trigger: GAGAATGCTGGACATGTTCAAGCGACCCACGGACCC...AGCCGATGCCTTCGGTTGCAGGAACAGAGAAAGGAGGCGTTCATAGATGAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | CTCCCAAGAACACGCAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGCACCTCCTTGCACTGTaGAGCAAAGAGCTTCATTTC | + |
Preference number: 5 (lower is better) Translates to: LPRTRKAQKASGSNSSAVHLLAL*SKELHF Trigger: GAAATGAAGCTCTTTGCTCAACAGTGCAAGGAGGTG...CACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTCTTGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CAA 90 bp | ATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCGCCAGCAGGCCTGCATaGAGTGCGTGCCTTCCAGGG | + |
Preference number: 5 (lower is better) Translates to: IRSMAKMQENRSGVDKGFASRPA*SACLPG Trigger: CCCTGGAAGGCACGCACTCAATGCAGGCCTGCTGGC...GAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | AGGGAAGACCTCGAGAGCTCACTGTCTCTCCTAGATGCCAAGAATCAATGTGCCATGGTCAGCAGGTTGTaGTTGAGCAGGAAGCCCTCG | + |
Preference number: 5 (lower is better) Translates to: REDLESSLSLLDAKNQCAMVSRL*LSRKPS Trigger: CGAGGGCTTCCTGCTCAACAACAACCTGCTGACCAT...GGCACATTGATTCTTGGCATCTAGGAGAGACAGTGAGCTCTCGAGGTCTTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CAA 90 bp | AGAACACGCAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGAGTTTGGTTTTCCACCAGCTGTaGACGTTGTGCCATAGCCTC | + |
Preference number: 5 (lower is better) Translates to: RTRKAQKASGSNSSAVSLVFHQL*TLCHSL Trigger: GAGGCTATGGCACAACGTCAACAGCTGGTGGAAAAC...CAAACTCACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CAA 90 bp | AGAACACGCAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGAGTTTGTGCCACCCATTGCCATaGCTCCAGACATCTGAGCTA | + |
Preference number: 5 (lower is better) Translates to: RTRKAQKASGSNSSAVSLCHPLP*LQTSEL Trigger: TAGCTCAGATGTCTGGAGCAATGGCAATGGGTGGCA...CAAACTCACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS GCA 90 bp | AAAATGTGGATACTCTACGATGTACTCGGCCATGCAGGTAAGAACTaGTGCCAGCCCCACCAAACTGTGGAAAGCAGCGACCAACTGAGG | + |
Preference number: 5 (lower is better) Translates to: KMWILYDVLGHAGKN*CQPHQTVESSDQLR Trigger: CCTCAGTTGGTCGCTGCTTTCCACAGTTTGGTGGGGCTGGCAGCAGTTCTTACCTGCATGGCCGAGTACATCGTAGAGTATCCACATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | TTGCTCATCTATGAACGCCTCCTTTCTCTGTTCCTGCAACCGAAGGCATCGGCTCACCAGCTGTTGACGTaGTGCCATAGCCTCCAAGAA | + |
Preference number: 5 (lower is better) Translates to: LLIYERLLSLFLQPKASAHQLLT*CHSLQE Trigger: TTCTTGGAGGCTATGGCACAACGTCAACAGCTGGTG...AGCCGATGCCTTCGGTTGCAGGAACAGAGAAAGGAGGCGTTCATAGATGAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | CCAAGAACACGCAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGAGTACTGCGTTGTCCAGGTaGATTTCTGTATGTGTGCCA | + |
Preference number: 5 (lower is better) Translates to: PRTRKAQKASGSNSSAVSTALSR*ISVCVP Trigger: TGGCACACATACAGAAATCAACCTGGACAACGCAGT...ACTCACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTCTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS CCA 90 bp | ACCTACGAAGGTGCCACCAGGGAGCAGATACAGATAATTATACTCTaGAGGGTCCGTGGGTCGCTTGAACATGTCCAGCATTCTCTGAGT | + |
Preference number: 5 (lower is better) Translates to: TYEGATREQIQIIIL*RVRGSLEHVQHSLS Trigger: ACTCAGAGAATGCTGGACATGTTCAAGCGACCCACGGACCCTCCAGAGTATAATTATCTGTATCTGCTCCCTGGTGGCACCTTCGTAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | ATTTGGCATGATCAATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGAGGTCATCTGGGAACTaGGAAGCTTCGCCTGCGCCT | + |
Preference number: 5 (lower is better) Translates to: IWHDQSGVWLRCKRTGQERSSGN*EASPAP Trigger: AGGCGCAGGCGAAGCTTCCAAGTTCCCAGATGACCT...CTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGATTGATCATGCCAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | ATTTGGCATGATCAATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGATGGGGGCCCTCACTTaGACCACCAGATCAGAAGCC | + |
Preference number: 5 (lower is better) Translates to: IWHDQSGVWLRCKRTGQEMGALT*TTRSEA Trigger: GGCTTCTGATCTGGTGGTCAAAGTGAGGGCCCCCAT...CTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGATTGATCATGCCAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | TTGCTCATCTATGAACGCCTCCTTTCTCTGTTCCTGCAACCGAAGGCATCGGCTGAGCAAGTCTGGATTTaGGGCTGGGTAGATGAAGCT | + |
Preference number: 5 (lower is better) Translates to: LLIYERLLSLFLQPKASAEQVWI*GWVDEA Trigger: AGCTTCATCTACCCAGCCCAAAATCCAGACTTGCTC...AGCCGATGCCTTCGGTTGCAGGAACAGAGAAAGGAGGCGTTCATAGATGAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | AGAACACGCAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGAGTTTGTCAGCACCAAGGGATTaGAACTGTTCCAAAGCAGCA | + |
Preference number: 5 (lower is better) Translates to: RTRKAQKASGSNSSAVSLSAPRD*NCSKAA Trigger: TGCTGCTTTGGAACAGTTCAAATCCCTTGGTGCTGA...CAAACTCACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CAA 90 bp | GTGAGGCTTCTTTGGGTCTTGAGAGCTTTGCTCATCTATGAACGCCTCCTTTCTGCGTCACATGTCTTCTaGGCGTCCCCCAGAAGCATA | + |
Preference number: 5 (lower is better) Translates to: VRLLWVLRALLIYERLLSASHVF*ASPRSI Trigger: TATGCTTCTGGGGGACGCCAAGAAGACATGTGACGC...AGAAAGGAGGCGTTCATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS TCA 90 bp | TATGGAATTCCTGGCTTTACCGGGGATTTACACCACAGTGCCTGGTaGGTACGAAGCGTTCGTACAAAGTCTCTCTTCCCAGGTAGAACC | + |
Preference number: 5 (lower is better) Translates to: YGIPGFTGDLHHSAW*VRSVRTKSLFPGRT Trigger: GGTTCTACCTGGGAAGAGAGACTTTGTACGAACGCTTCGTACTCACCAGGCACTGTGGTGTAAATCCCCGGTAAAGCCAGGAATTCCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS GCA 90 bp | CTGCTTATATGGAATTCCTGGCTTTACCGGGGATTTACACCACAGTaGCTGGTGAGTACGAAGCGTTCGTACAAAGTCTCTCTTCCCAGG | + |
Preference number: 5 (lower is better) Translates to: LLIWNSWLYRGFTPQ*LVSTKRSYKVSLPR Trigger: CCTGGGAAGAGAGACTTTGTACGAACGCTTCGTACTCACCAGGCACTGTGGTGTAAATCCCCGGTAAAGCCAGGAATTCCATATAAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS CCA 90 bp | ATCGGCAATGGGGTACTGAGCTTTAGCAGCACAGAGCCCATACCCTaGAGTAATAACAATGCTGTTAGCTTCCCGGATCATCTCAACTGC | + |
Preference number: 5 (lower is better) Translates to: IGNGVLSFSSTEPIP*SNNNAVSFPDHLNC Trigger: GCAGTTGAGATGATCCGGGAAGCTAACAGCATTGTTATTACTCCAGGGTATGGGCTCTGTGCTGCTAAAGCTCAGTACCCCATTGCCGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | AGAACACGCAAGGCTCAAAAGGCAAGTGGCAGCAACAGCAGCGCTGTGAGTTTGTTAGAGGACCCCAAGTaGCTAAGGAAAGGACATGAA | + |
Preference number: 5 (lower is better) Translates to: RTRKAQKASGSNSSAVSLLEDPK*LRKGHE Trigger: TTCATGTCCTTTCCTTAGCAACTTGGGGTCCTCTAA...CAAACTCACAGCGCTGCTGTTGCTGCCACTTGCCTTTTGAGCCTTGCGTGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CAA 90 bp | GTGAGGCTTCTTTGGGTCTTGAGAGCTTTGCTCATCTATGAACGCCTCCTTTCTGATTCCACGACAACATaGAAGCCCTGCTTGACCAGG | + |
Preference number: 5 (lower is better) Translates to: VRLLWVLRALLIYERLLSDSTTT*KPCLTR Trigger: CCTGGTCAAGCAGGGCTTCAATGTTGTCGTGGAATC...AGAAAGGAGGCGTTCATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | GAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATCTGGTGAAAAGCTGCGCCCATCGACTTaGCTGCCCCCGCAGAAGCGA | + |
Preference number: 5 (lower is better) Translates to: ENRSGVDKGFKLVTSGEKLRPST*LPPQKR Trigger: TCGCTTCTGCGGGGGCAGCAAAGTCGATGGGCGCAG...CTTTTCACCAGATGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | TTGCTCATCTATGAACGCCTCCTTTCTCTGTTCCTGCAACCGAAGGCATCGGCTCACCTCCTTGCACTGTaGAGCAAAGAGCTTCATTTC | + |
Preference number: 5 (lower is better) Translates to: LLIYERLLSLFLQPKASAHLLAL*SKELHF Trigger: GAAATGAAGCTCTTTGCTCAACAGTGCAAGGAGGTG...AGCCGATGCCTTCGGTTGCAGGAACAGAGAAAGGAGGCGTTCATAGATGAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | CGCTGTGAGTTTGGAGGCTTCTTGACAGCCTCGTCTCTTCCCCTAGGGTCACTTTTGACGTGGCATCCATaGCAAAATGTGGATACTCTA | + |
Preference number: 5 (lower is better) Translates to: RCEFGGFLTASSLPLGSLLTWHP*QNVDTL Trigger: TAGAGTATCCACATTTTGCAATGGATGCCACGTCAA...AAGTGACCCTAGGGGAAGAGACGAGGCTGTCAAGAAGCCTCCAAACTCACAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS TCA 90 bp | TTCTGTATGTGTGCCAGAAATTTCCATGGGTTTTCCACCAGCTGTTaGCGTTGTGCCATAGCCTCCAAGAATGACATTAGCCAGGGAGCG | + |
Preference number: 5 (lower is better) Translates to: FCMCARNFHGFSTSC*RCAIASKNDISQGA Trigger: CGCTCCCTGGCTAATGTCATTCTTGGAGGCTATGGCACAACGTCAACAGCTGGTGGAAAACCCATGGAAATTTCTGGCACACATACAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS TCA 90 bp | GACCGGCATGCCTGCAATTATAGAATTGGGGTCTTCTTGAGCCGCTaGATTCACAGTGTCGTTTGCTCCAATGACAAGAACCAAGTCGGT | + |
Preference number: 5 (lower is better) Translates to: DRHACNYRIGVFLSR*IHSVVCSNDKNQVG Trigger: ACCGACTTGGTTCTTGTCATTGGAGCAAACGACACTGTGAATTCAGCGGCTCAAGAAGACCCCAATTCTATAATTGCAGGCATGCCGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS TCA 90 bp | ACCTCAAGGACCGGCATGCCTGCAATTATAGAATTGGGGTCTTCTTaGGCCGCTGAATTCACAGTGTCGTTTGCTCCAATGACAAGAACC | + |
Preference number: 5 (lower is better) Translates to: TSRTGMPAIIELGSS*AAEFTVSFAPMTRT Trigger: GGTTCTTGTCATTGGAGCAAACGACACTGTGAATTCAGCGGCTCAAGAAGACCCCAATTCTATAATTGCAGGCATGCCGGTCCTTGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS TCA 90 bp | GGAGCAGATACAGATAATTATACTCTGGAGGGTCCGTGGGTCGCTTaGACATGTCCAGCATTCTCTGAGTCACCAGAAAACCACCTGGAA | + |
Preference number: 5 (lower is better) Translates to: GADTDNYTLEGPWVA*TCPAFSESPENHLE Trigger: TTCCAGGTGGTTTTCTGGTGACTCAGAGAATGCTGGACATGTTCAAGCGACCCACGGACCCTCCAGAGTATAATTATCTGTATCTGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS GCA 90 bp | TGTTATAGCCACCGTAGAGAGCAGCTAAATATCCACCTACGAAGGTaGCACCAGGGAGCAGATACAGATAATTATACTCTGGAGGGTCCG | + |
Preference number: 5 (lower is better) Translates to: CYSHRREQLNIHLRR*HQGADTDNYTLEGP Trigger: CGGACCCTCCAGAGTATAATTATCTGTATCTGCTCCCTGGTGGCACCTTCGTAGGTGGATATTTAGCTGCTCTCTACGGTGGCTATAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS CCA 90 bp | GGCCATGGAACTGAGAGCATCATAGCCCTGAGCTATTGTCACTCTTaGAACCTGGTCCATCGCCAGAACTGTGGTTTTTCTTTCAGAAAG | + |
Preference number: 5 (lower is better) Translates to: GHGTESIIALSYCHS*NLVHRQNCGFSFRK Trigger: CTTTCTGAAAGAAAAACCACAGTTCTGGCGATGGACCAGGTTCCAAGAGTGACAATAGCTCAGGGCTATGATGCTCTCAGTTCCATGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | GCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACAACATTGAAGCCCTGCTaGACCAGGGCCTGGACCCCC | + |
Preference number: 5 (lower is better) Translates to: AKMQENRSGVDKGFKLVTTLKPC*TRAWTP Trigger: GGGGGTCCAGGCCCTGGTCAAGCAGGGCTTCAATGT...TGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | GAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATCTGGTGAAAAGACATTGAAGCCCTGCTaGACCAGGGCCTGGACCCCC | + |
Preference number: 5 (lower is better) Translates to: ENRSGVDKGFKLVTSGEKTLKPC*TRAWTP Trigger: GGGGGTCCAGGCCCTGGTCAAGCAGGGCTTCAATGT...CTTTTCACCAGATGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | GTGGACAAAATACTCTTGCTTTTTGGGCAATGGCGACAGTACATAGGTAGGCGAGATTCCACGACAACATaGAAGCCCTGCTTGACCAGG | + |
Preference number: 5 (lower is better) Translates to: VDKILLLFGQWRQYIGRRDSTTT*KPCLTR Trigger: CCTGGTCAAGCAGGGCTTCAATGTTGTCGTGGAATC...TCGCCTACCTATGTACTGTCGCCATTGCCCAAAAAGCAAGAGTATTTTGTCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | GTGAGGCTTCTTTGGGTCTTGAGAGCTTTGCTCATCTATGAACGCCTCCTTTCTGAGCAAGTCTGGATTTaGGGCTGGGTAGATGAAGCT | + |
Preference number: 5 (lower is better) Translates to: VRLLWVLRALLIYERLLSEQVWI*GWVDEA Trigger: AGCTTCATCTACCCAGCCCAAAATCCAGACTTGCTC...AGAAAGGAGGCGTTCATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | CATTTATTACTCAGATGGTTGCATTCCATTCAAGCGCACTTAATACAGTCCATTGCCAGCAGGCCTGCATaGAGTGCGTGCCTTCCAGGG | + |
Preference number: 5 (lower is better) Translates to: HLLLRWLHSIQAHLIQSIASRPA*SACLPG Trigger: CCCTGGAAGGCACGCACTCAATGCAGGCCTGCTGGC...AATGGACTGTATTAAGTGCGCTTGAATGGAATGCAACCATCTGAGTAATAAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | ATTTGGCATGATCAATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGCACCAGCTGTTGACGTaGTGCCATAGCCTCCAAGAA | + |
Preference number: 5 (lower is better) Translates to: IWHDQSGVWLRCKRTGQEHQLLT*CHSLQE Trigger: TTCTTGGAGGCTATGGCACAACGTCAACAGCTGGTG...CTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGATTGATCATGCCAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | ATTTGGCATGATCAATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGGTTTTCCACCAGCTGTaGACGTTGTGCCATAGCCTC | + |
Preference number: 5 (lower is better) Translates to: IWHDQSGVWLRCKRTGQEVFHQL*TLCHSL Trigger: GAGGCTATGGCACAACGTCAACAGCTGGTGGAAAAC...CTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGATTGATCATGCCAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | GTGGACAAAATACTCTTGCTTTTTGGGCAATGGCGACAGTACATAGGTAGGCGATGCCACCCATTGCCATaGCTCCAGACATCTGAGCTA | + |
Preference number: 5 (lower is better) Translates to: VDKILLLFGQWRQYIGRRCHPLP*LQTSEL Trigger: TAGCTCAGATGTCTGGAGCAATGGCAATGGGTGGCA...TCGCCTACCTATGTACTGTCGCCATTGCCCAAAAAGCAAGAGTATTTTGTCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | GATCTTGAAAATCTCCATTGTTTTGTGAGGCTTCTTTGGGTCTTGAGAGCTTTGAGGTCATCTGGGAACTaGGAAGCTTCGCCTGCGCCT | + |
Preference number: 5 (lower is better) Translates to: DLENLHCFVRLLWVLRALRSSGN*EASPAP Trigger: AGGCGCAGGCGAAGCTTCCAAGTTCCCAGATGACCT...CAAAGCTCTCAAGACCCAAAGAAGCCTCACAAAACAATGGAGATTTTCAAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | GATCTTGAAAATCTCCATTGTTTTGTGAGGCTTCTTTGGGTCTTGAGAGCTTTGATGGGGGCCCTCACTTaGACCACCAGATCAGAAGCC | + |
Preference number: 5 (lower is better) Translates to: DLENLHCFVRLLWVLRALMGALT*TTRSEA Trigger: GGCTTCTGATCTGGTGGTCAAAGTGAGGGCCCCCAT...CAAAGCTCTCAAGACCCAAAGAAGCCTCACAAAACAATGGAGATTTTCAAGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | AGACCCATGAAAAATGATCTAAGTGTGCACGGTCCTCCACTCTTCTGCCTAACACATAGCCCTGAGCTATaGTCACTCTTGGAACCTGGT | + |
Preference number: 5 (lower is better) Translates to: RPMKNDLSVHGPPLFCLTHSPEL*SLLEPG Trigger: ACCAGGTTCCAAGAGTGACAATAGCTCAGGGCTATG...TGTTAGGCAGAAGAGTGGAGGACCGTGCACACTTAGATCATTTTTCATGGGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CAA 90 bp | ATTTGGCATGATCAATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGCATAGCCCTGAGCTATaGTCACTCTTGGAACCTGGT | + |
Preference number: 5 (lower is better) Translates to: IWHDQSGVWLRCKRTGQEHSPEL*SLLEPG Trigger: ACCAGGTTCCAAGAGTGACAATAGCTCAGGGCTATG...CTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGATTGATCATGCCAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | CTTTGTCATCAGAGACGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGCTGCGCCCATCGACTTaGCTGCCCCCGCAGAAGCGA | + |
Preference number: 5 (lower is better) Translates to: LCHQRRSYITFMNSFITQLRPST*LPPQKR Trigger: TCGCTTCTGCGGGGGCAGCAAAGTCGATGGGCGCAG...CTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR CAA 90 bp | ATAGATTTTAGGCAGGGATGGAGCCATGATAAAGAGTGGGAGGAAGTAAAATTCGTCAGCAGGTTGTTGTaGAGCAGGAAGCCCTCGGCA | + |
Preference number: 5 (lower is better) Translates to: IDFRQGWSHDKEWEEVKFVSRLL*SRKPSA Trigger: TGCCGAGGGCTTCCTGCTCAACAACAACCTGCTGAC...GAATTTTACTTCCTCCCACTCTTTATCATGGCTCCATCCCTGCCTAAAATCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CAA 90 bp | ATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCCACCAGCTGTTGACGTaGTGCCATAGCCTCCAAGAA | + |
Preference number: 5 (lower is better) Translates to: IRSMAKMQENRSGVDKGFHQLLT*CHSLQE Trigger: TTCTTGGAGGCTATGGCACAACGTCAACAGCTGGTG...GAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | TTGCTCATCTATGAACGCCTCCTTTCTCTGTTCCTGCAACCGAAGGCATCGGCTCCAAACCTGACTTTTTaGCCTTGTTCAGTAAGCATC | + |
Preference number: 5 (lower is better) Translates to: LLIYERLLSLFLQPKASAPNLTF*PCSVSI Trigger: GATGCTTACTGAACAAGGCAAAAAAGTCAGGTTTGG...AGCCGATGCCTTCGGTTGCAGGAACAGAGAAAGGAGGCGTTCATAGATGAGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | ATAGATTTTAGGCAGGGATGGAGCCATGATAAAGAGTGGGAGGAAGTAAAATTCGGGTCCGTGGGTCGCTaGAACATGTCCAGCATTCTC | + |
Preference number: 5 (lower is better) Translates to: IDFRQGWSHDKEWEEVKFGSVGR*NMSSIL Trigger: GAGAATGCTGGACATGTTCAAGCGACCCACGGACCC...GAATTTTACTTCCTCCCACTCTTTATCATGGCTCCATCCCTGCCTAAAATCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS TCA 90 bp | CTGCTAAAACAACAGCCTTATAACCAGAGATGTTGGCCATGGAACTaGGAGCATCATAGCCCTGAGCTATTGTCACTCTTGGAACCTGGT | + |
Preference number: 5 (lower is better) Translates to: LLKQQPYNQRCWPWN*EHHSPELLSLLEPG Trigger: ACCAGGTTCCAAGAGTGACAATAGCTCAGGGCTATGATGCTCTCAGTTCCATGGCCAACATCTCTGGTTATAAGGCTGTTGTTTTAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS TCA 90 bp | CAGATTCCTTCAAGTCAACCTCCAAGGGTTCAGCACCAAGGGATTTaGACTGTTCCAAAGCAGCAGCTCTTGTATCAAATCCTCGGACAA | + |
Preference number: 5 (lower is better) Translates to: QIPSSQPPRVQHQGI*TVPKQQLLYQILGQ Trigger: TTGTCCGAGGATTTGATACAAGAGCTGCTGCTTTGGAACAGTTCAAATCCCTTGGTGCTGAACCCTTGGAGGTTGACTTGAAGGAATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS TCA 90 bp | TTGCCTTGTTCAGTAAGCATCTTCACCAAATCGGCAATGGGGTACTaGGCTTTAGCAGCACAGAGCCCATACCCTGGAGTAATAACAATG | + |
Preference number: 5 (lower is better) Translates to: LPCSVSIFTKSAMGY*ALAAQSPYPGVITM Trigger: CATTGTTATTACTCCAGGGTATGGGCTCTGTGCTGCTAAAGCTCAGTACCCCATTGCCGATTTGGTGAAGATGCTTACTGAACAAGGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | GTGAGGCTTCTTTGGGTCTTGAGAGCTTTGCTCATCTATGAACGCCTCCTTTCTTTAGAGGACCCCAAGTaGCTAAGGAAAGGACATGAA | + |
Preference number: 5 (lower is better) Translates to: VRLLWVLRALLIYERLLSLEDPK*LRKGHE Trigger: TTCATGTCCTTTCCTTAGCAACTTGGGGTCCTCTAA...AGAAAGGAGGCGTTCATAGATGAGCAAAGCTCTCAAGACCCAAAGAAGCCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | GTGGACAAAATACTCTTGCTTTTTGGGCAATGGCGACAGTACATAGGTAGGCGAAACTCGCTTCTCGTTTaGGAAAATCTCCTTGGGGAC | + |
Preference number: 5 (lower is better) Translates to: VDKILLLFGQWRQYIGRRNSLLV*ENLLGD Trigger: GTCCCCAAGGAGATTTTCCAAAACGAGAAGCGAGTT...TCGCCTACCTATGTACTGTCGCCATTGCCCAAAAAGCAAGAGTATTTTGTCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | AACCATTTAATGTTAGCTCTTTGTCATCAGAGACGAAGCTACATCACTTTTATGACATTGAAGCCCTGCTaGACCAGGGCCTGGACCCCC | + |
Preference number: 5 (lower is better) Translates to: NHLMLALCHQRRSYITFMTLKPC*TRAWTP Trigger: GGGGGTCCAGGCCCTGGTCAAGCAGGGCTTCAATGT...CATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAGAGCTAACATTAAATGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR CAA 90 bp | GCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACAGGGTCCGTGGGTCGCTaGAACATGTCCAGCATTCTC | + |
Preference number: 5 (lower is better) Translates to: AKMQENRSGVDKGFKLVTGSVGR*NMSSIL Trigger: GAGAATGCTGGACATGTTCAAGCGACCCACGGACCC...TGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | AAGATGAACAGCAGTGTTCCTGAGGGAAGACCTCGAGAGCTCACTGTCTCTCCTACTAACCTGACTTTTTaGCCTTGTTCAGTAAGCATC | + |
Preference number: 5 (lower is better) Translates to: KMNSSVPEGRPRELTVSPTNLTF*PCSVSI Trigger: GATGCTTACTGAACAAGGCAAAAAAGTCAGGTTAGT...AGGAGAGACAGTGAGCTCTCGAGGTCTTCCCTCAGGAACACTGCTGTTCATCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS TCA 90 bp | TCCGCCGATGTAAGTGCCAAGGTAAGCCACAATCTTGGTGAAATTTaGCGTGGCATCCATTGCAAAATGTGGATACTCTACGATGTACTC | + |
Preference number: 5 (lower is better) Translates to: SADVSAKVSHNLGEI*RGIHCKMWILYDVL Trigger: GAGTACATCGTAGAGTATCCACATTTTGCAATGGATGCCACGTCAAATTTCACCAAGATTGTGGCTTACCTTGGCACTTACATCGGCGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | GATCTTGAAAATCTCCATTGTTTTGTGAGGCTTCTTTGGGTCTTGAGAGCTTTGGAGCTATTGTCACTCTaGGAACCTGGTCCATCGCCA | + |
Preference number: 5 (lower is better) Translates to: DLENLHCFVRLLWVLRALELLSL*EPGPSP Trigger: TGGCGATGGACCAGGTTCCAAGAGTGACAATAGCTC...CAAAGCTCTCAAGACCCAAAGAAGCCTCACAAAACAATGGAGATTTTCAAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | GATCTTGAAAATCTCCATTGTTTTGTGAGGCTTCTTTGGGTCTTGAGAGCTTTGTTTCGCGTATCCTCCTaGGCCCTCACCAGATTCCTT | + |
Preference number: 5 (lower is better) Translates to: DLENLHCFVRLLWVLRALFRVSS*ALTRFL Trigger: AAGGAATCTGGTGAGGGCCAAGGAGGATACGCGAAA...CAAAGCTCTCAAGACCCAAAGAAGCCTCACAAAACAATGGAGATTTTCAAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | GAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATCTGGTGAAAAGATGGTCAGCAGGTTGTaGTTGAGCAGGAAGCCCTCG | + |
Preference number: 5 (lower is better) Translates to: ENRSGVDKGFKLVTSGEKMVSRL*LSRKPS Trigger: CGAGGGCTTCCTGCTCAACAACAACCTGCTGACCAT...CTTTTCACCAGATGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | ATAGATTTTAGGCAGGGATGGAGCCATGATAAAGAGTGGGAGGAAGTAAAATTCCACCAGCTGTTGACGTaGTGCCATAGCCTCCAAGAA | + |
Preference number: 5 (lower is better) Translates to: IDFRQGWSHDKEWEEVKFHQLLT*CHSLQE Trigger: TTCTTGGAGGCTATGGCACAACGTCAACAGCTGGTG...GAATTTTACTTCCTCCCACTCTTTATCATGGCTCCATCCCTGCCTAAAATCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CAA 90 bp | ATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCTTAGAGGACCCCAAGTaGCTAAGGAAAGGACATGAA | + |
Preference number: 5 (lower is better) Translates to: IRSMAKMQENRSGVDKGFLEDPK*LRKGHE Trigger: TTCATGTCCTTTCCTTAGCAACTTGGGGTCCTCTAA...GAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | CGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGATGGTTGCATTCCATATGGGGGCCCTCACTTaGACCACCAGATCAGAAGCC | + |
Preference number: 5 (lower is better) Translates to: RSYITFMNSFITQMVAFHMGALT*TTRSEA Trigger: GGCTTCTGATCTGGTGGTCAAAGTGAGGGCCCCCAT...ATGGAATGCAACCATCTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR CAA 90 bp | GATCTTGAAAATCTCCATTGTTTTGTGAGGCTTCTTTGGGTCTTGAGAGCTTTGGAGCAAGTCTGGATTTaGGGCTGGGTAGATGAAGCT | + |
Preference number: 5 (lower is better) Translates to: DLENLHCFVRLLWVLRALEQVWI*GWVDEA Trigger: AGCTTCATCTACCCAGCCCAAAATCCAGACTTGCTC...CAAAGCTCTCAAGACCCAAAGAAGCCTCACAAAACAATGGAGATTTTCAAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | ATAGATTTTAGGCAGGGATGGAGCCATGATAAAGAGTGGGAGGAAGTAAAATTCGAGCAAGTCTGGATTTaGGGCTGGGTAGATGAAGCT | + |
Preference number: 5 (lower is better) Translates to: IDFRQGWSHDKEWEEVKFEQVWI*GWVDEA Trigger: AGCTTCATCTACCCAGCCCAAAATCCAGACTTGCTC...GAATTTTACTTCCTCCCACTCTTTATCATGGCTCCATCCCTGCCTAAAATCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CAA 90 bp | GCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACAGAGCTATTGTCACTCTaGGAACCTGGTCCATCGCCA | + |
Preference number: 5 (lower is better) Translates to: AKMQENRSGVDKGFKLVTELLSL*EPGPSP Trigger: TGGCGATGGACCAGGTTCCAAGAGTGACAATAGCTC...TGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | GCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATTTCGCGTATCCTCCTaGGCCCTCACCAGATTCCTT | + |
Preference number: 5 (lower is better) Translates to: AKMQENRSGVDKGFKLVTFRVSS*ALTRFL Trigger: AAGGAATCTGGTGAGGGCCAAGGAGGATACGCGAAA...TGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | ATTTGGCATGATCAATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGTTGACGTGGCATCCATaGCAAAATGTGGATACTCTA | + |
Preference number: 5 (lower is better) Translates to: IWHDQSGVWLRCKRTGQELTWHP*QNVDTL Trigger: TAGAGTATCCACATTTTGCAATGGATGCCACGTCAA...CTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGATTGATCATGCCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | CGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGATGGTTGCATTCCATGTCAGCAGGTTGTTGTaGAGCAGGAAGCCCTCGGCA | + |
Preference number: 5 (lower is better) Translates to: RSYITFMNSFITQMVAFHVSRLL*SRKPSA Trigger: TGCCGAGGGCTTCCTGCTCAACAACAACCTGCTGAC...ATGGAATGCAACCATCTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR CAA 90 bp | CATTTATTACTCAGATGGTTGCATTCCATTCAAGCGCACTTAATACAGTCCATTATGGTCAGCAGGTTGTaGTTGAGCAGGAAGCCCTCG | + |
Preference number: 5 (lower is better) Translates to: HLLLRWLHSIQAHLIQSIMVSRL*LSRKPS Trigger: CGAGGGCTTCCTGCTCAACAACAACCTGCTGACCAT...AATGGACTGTATTAAGTGCGCTTGAATGGAATGCAACCATCTGAGTAATAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | GCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACAGTTTTCCACCAGCTGTaGACGTTGTGCCATAGCCTC | + |
Preference number: 5 (lower is better) Translates to: AKMQENRSGVDKGFKLVTVFHQL*TLCHSL Trigger: GAGGCTATGGCACAACGTCAACAGCTGGTGGAAAAC...TGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | AGACCCATGAAAAATGATCTAAGTGTGCACGGTCCTCCACTCTTCTGCCTAACAATCATCTCAACTGCGTaGTCCAGGTTGATTTCTGTA | + |
Preference number: 5 (lower is better) Translates to: RPMKNDLSVHGPPLFCLTIISTA*SRLISV Trigger: TACAGAAATCAACCTGGACAACGCAGTTGAGATGAT...TGTTAGGCAGAAGAGTGGAGGACCGTGCACACTTAGATCATTTTTCATGGGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109204.8 |
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CDS-3UTR CAA 90 bp | GTGGACAAAATACTCTTGCTTTTTGGGCAATGGCGACAGTACATAGGTAGGCGAATCATCTCAACTGCGTaGTCCAGGTTGATTTCTGTA | + |
Preference number: 5 (lower is better) Translates to: VDKILLLFGQWRQYIGRRIISTA*SRLISV Trigger: TACAGAAATCAACCTGGACAACGCAGTTGAGATGAT...TCGCCTACCTATGTACTGTCGCCATTGCCCAAAAAGCAAGAGTATTTTGTCCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | CATTTATTACTCAGATGGTTGCATTCCATTCAAGCGCACTTAATACAGTCCATTCGATGGTGCCACCCATaGCCATTGCTCCAGACATCT | + |
Preference number: 5 (lower is better) Translates to: HLLLRWLHSIQAHLIQSIRWCHP*PLLQTS Trigger: AGATGTCTGGAGCAATGGCAATGGGTGGCACCATCG...AATGGACTGTATTAAGTGCGCTTGAATGGAATGCAACCATCTGAGTAATAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | CTTTGTCATCAGAGACGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGATGGTCAGCAGGTTGTaGTTGAGCAGGAAGCCCTCG | + |
Preference number: 5 (lower is better) Translates to: LCHQRRSYITFMNSFITQMVSRL*LSRKPS Trigger: CGAGGGCTTCCTGCTCAACAACAACCTGCTGACCAT...CTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR CAA 90 bp | GATCTTGAAAATCTCCATTGTTTTGTGAGGCTTCTTTGGGTCTTGAGAGCTTTGACTGCGTTGTCCAGGTaGATTTCTGTATGTGTGCCA | + |
Preference number: 5 (lower is better) Translates to: DLENLHCFVRLLWVLRALTALSR*ISVCVP Trigger: TGGCACACATACAGAAATCAACCTGGACAACGCAGT...CAAAGCTCTCAAGACCCAAAGAAGCCTCACAAAACAATGGAGATTTTCAAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | ATCCGGAGTATGGCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCCCAAACCTGACTTTTTaGCCTTGTTCAGTAAGCATC | + |
Preference number: 5 (lower is better) Translates to: IRSMAKMQENRSGVDKGFPNLTF*PCSVSI Trigger: GATGCTTACTGAACAAGGCAAAAAAGTCAGGTTTGG...GAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGCCATACTCCGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | CGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGATGGTTGCATTCCATGCGTCACATGTCTTCTaGGCGTCCCCCAGAAGCATA | + |
Preference number: 5 (lower is better) Translates to: RSYITFMNSFITQMVAFHASHVF*ASPRSI Trigger: TATGCTTCTGGGGGACGCCAAGAAGACATGTGACGC...ATGGAATGCAACCATCTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR CAA 90 bp | CTTTGTCATCAGAGACGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGCGATGGTGCCACCCATaGCCATTGCTCCAGACATCT | + |
Preference number: 5 (lower is better) Translates to: LCHQRRSYITFMNSFITQRWCHP*PLLQTS Trigger: AGATGTCTGGAGCAATGGCAATGGGTGGCACCATCG...CTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099149.10 |
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CDS-3UTR CAA 90 bp | AACCATTTAATGTTAGCTCTTTGTCATCAGAGACGAAGCTACATCACTTTTATGGAGCTATTGTCACTCTaGGAACCTGGTCCATCGCCA | + |
Preference number: 5 (lower is better) Translates to: NHLMLALCHQRRSYITFMELLSL*EPGPSP Trigger: TGGCGATGGACCAGGTTCCAAGAGTGACAATAGCTC...CATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAGAGCTAACATTAAATGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR CAA 90 bp | CATTTATTACTCAGATGGTTGCATTCCATTCAAGCGCACTTAATACAGTCCATTCATAGCCCTGAGCTATaGTCACTCTTGGAACCTGGT | + |
Preference number: 5 (lower is better) Translates to: HLLLRWLHSIQAHLIQSIHSPEL*SLLEPG Trigger: ACCAGGTTCCAAGAGTGACAATAGCTCAGGGCTATG...AATGGACTGTATTAAGTGCGCTTGAATGGAATGCAACCATCTGAGTAATAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | GAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATCTGGTGAAAAGTCAGCACCAAGGGATTaGAACTGTTCCAAAGCAGCA | + |
Preference number: 5 (lower is better) Translates to: ENRSGVDKGFKLVTSGEKSAPRD*NCSKAA Trigger: TGCTGCTTTGGAACAGTTCAAATCCCTTGGTGCTGA...CTTTTCACCAGATGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | GCTAAGATGCAAGAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATCAGCACCAAGGGATTaGAACTGTTCCAAAGCAGCA | + |
Preference number: 5 (lower is better) Translates to: AKMQENRSGVDKGFKLVTSAPRD*NCSKAA Trigger: TGCTGCTTTGGAACAGTTCAAATCCCTTGGTGCTGA...TGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTCTTGCATCTTAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | CTTTGTCATCAGAGACGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGTTTCGCGTATCCTCCTaGGCCCTCACCAGATTCCTT | + |
Preference number: 5 (lower is better) Translates to: LCHQRRSYITFMNSFITQFRVSS*ALTRFL Trigger: AAGGAATCTGGTGAGGGCCAAGGAGGATACGCGAAA...CTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR CAA 90 bp | GAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATCTGGTGAAAAGACTGCGTTGTCCAGGTaGATTTCTGTATGTGTGCCA | + |
Preference number: 5 (lower is better) Translates to: ENRSGVDKGFKLVTSGEKTALSR*ISVCVP Trigger: TGGCACACATACAGAAATCAACCTGGACAACGCAGT...CTTTTCACCAGATGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | GAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATCTGGTGAAAAGTTAGAGGACCCCAAGTaGCTAAGGAAAGGACATGAA | + |
Preference number: 5 (lower is better) Translates to: ENRSGVDKGFKLVTSGEKLEDPK*LRKGHE Trigger: TTCATGTCCTTTCCTTAGCAACTTGGGGTCCTCTAA...CTTTTCACCAGATGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | CTTTGTCATCAGAGACGAAGCTACATCACTTTTATGAACTCATTTATTACTCAGCATAGCCCTGAGCTATaGTCACTCTTGGAACCTGGT | + |
Preference number: 5 (lower is better) Translates to: LCHQRRSYITFMNSFITQHSPEL*SLLEPG Trigger: ACCAGGTTCCAAGAGTGACAATAGCTCAGGGCTATG...CTGAGTAATAAATGAGTTCATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR CAA 90 bp | CATTTATTACTCAGATGGTTGCATTCCATTCAAGCGCACTTAATACAGTCCATTCACCTCCTTGCACTGTaGAGCAAAGAGCTTCATTTC | + |
Preference number: 5 (lower is better) Translates to: HLLLRWLHSIQAHLIQSIHLLAL*SKELHF Trigger: GAAATGAAGCTCTTTGCTCAACAGTGCAAGGAGGTG...AATGGACTGTATTAAGTGCGCTTGAATGGAATGCAACCATCTGAGTAATAAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | GATCTTGAAAATCTCCATTGTTTTGTGAGGCTTCTTTGGGTCTTGAGAGCTTTGTTGACGTGGCATCCATaGCAAAATGTGGATACTCTA | + |
Preference number: 5 (lower is better) Translates to: DLENLHCFVRLLWVLRALLTWHP*QNVDTL Trigger: TAGAGTATCCACATTTTGCAATGGATGCCACGTCAA...CAAAGCTCTCAAGACCCAAAGAAGCCTCACAAAACAATGGAGATTTTCAAGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | AACCATTTAATGTTAGCTCTTTGTCATCAGAGACGAAGCTACATCACTTTTATGTCAGCACCAAGGGATTaGAACTGTTCCAAAGCAGCA | + |
Preference number: 5 (lower is better) Translates to: NHLMLALCHQRRSYITFMSAPRD*NCSKAA Trigger: TGCTGCTTTGGAACAGTTCAAATCCCTTGGTGCTGA...CATAAAAGTGATGTAGCTTCGTCTCTGATGACAAAGAGCTAACATTAAATGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 |
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CDS-3UTR CAA 90 bp | GAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATCTGGTGAAAAGTTGACGTGGCATCCATaGCAAAATGTGGATACTCTA | + |
Preference number: 5 (lower is better) Translates to: ENRSGVDKGFKLVTSGEKLTWHP*QNVDTL Trigger: TAGAGTATCCACATTTTGCAATGGATGCCACGTCAA...CTTTTCACCAGATGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | GAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATCTGGTGAAAAGATCATCTCAACTGCGTaGTCCAGGTTGATTTCTGTA | + |
Preference number: 5 (lower is better) Translates to: ENRSGVDKGFKLVTSGEKIISTA*SRLISV Trigger: TACAGAAATCAACCTGGACAACGCAGTTGAGATGAT...CTTTTCACCAGATGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS-3UTR CAA 90 bp | GAGAACAGGTCAGGAGTTGATAAAGGTTTCAAATTAGTCACATCTGGTGAAAAGCCAAACCTGACTTTTTaGCCTTGTTCAGTAAGCATC | + |
Preference number: 5 (lower is better) Translates to: ENRSGVDKGFKLVTSGEKPNLTF*PCSVSI Trigger: GATGCTTACTGAACAAGGCAAAAAAGTCAGGTTTGG...CTTTTCACCAGATGTGACTAATTTGAAACCTTTATCAACTCCTGACCTGTTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS GCA 72 bp | CAGCTGCGGGTCCGGCTTCAGGCCTCCAAGGGTGGCTaGCAGGCCTCCTGCAACCCCGATCATGCCCAAGGC | + |
Preference number: 6 (lower is better) Translates to: QLRVRLQASKGG*QASCNPDHAQG Trigger: GCCTTGGGCATGATCGGGGTTGCAGGAGGCCTGGCAGCCACCCTTGGAGGCCTGAAGCCGGACCCGCAGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS CAA 72 bp | CCGATGAGCGCGCCCACGATGGTCAGCAGGTTGTTGTaGAGCAGGAAGCCCTCGGCACACAGAGCCCAGCCC | + |
Preference number: 6 (lower is better) Translates to: PMSAPTMVSRLL*SRKPSAHRAQP Trigger: GGGCTGGGCTCTGTGTGCCGAGGGCTTCCTGCTCAACAACAACCTGCTGACCATCGTGGGCGCGCTCATCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS GCA 72 bp | CAAGGGTGGCTGCCAGGCCTCCTGCAACCCCGATCATaGCCAAGGCATTGCCGAGTCGAGCTGTTCCCTGAG | + |
Preference number: 6 (lower is better) Translates to: QGWLPGLLQPRS*PRHCRVELFPE Trigger: CTCAGGGAACAGCTCGACTCGGCAATGCCTTGGGCATGATCGGGGTTGCAGGAGGCCTGGCAGCCACCCTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS CCA 72 bp | TGCCCAAGGCATTGCCGAGTCGAGCTGTTCCCTGAGTaGAAAGGCCGCCCAGGGCCCCAACACAGCACAAGC | + |
Preference number: 6 (lower is better) Translates to: CPRHCRVELFPE*KGRPGPQHSTS Trigger: GCTTGTGCTGTGTTGGGGCCCTGGGCGGCCTTTCCACTCAGGGAACAGCTCGACTCGGCAATGCCTTGGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS CAA 72 bp | GAGCCGATGAGCGCGCCCACGATGGTCAGCAGGTTGTaGTTGAGCAGGAAGCCCTCGGCACACAGAGCCCAG | + |
Preference number: 6 (lower is better) Translates to: EPMSAPTMVSRL*LSRKPSAHRAQ Trigger: CTGGGCTCTGTGTGCCGAGGGCTTCCTGCTCAACAACAACCTGCTGACCATCGTGGGCGCGCTCATCGGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS CAA 90 bp | GGATCCGCTTTGCGATCGTCAGGCCGATGGTGCCACCCATTGCCATaGCTCCAGACATCTGAGCTAACAGCTGCGGGTCCGGCTTCAGGC | + |
Preference number: 6 (lower is better) Translates to: GSALRSSGRWCHPLP*LQTSELTAAGPASG Trigger: GCCTGAAGCCGGACCCGCAGCTGTTAGCTCAGATGTCTGGAGCAATGGCAATGGGTGGCACCATCGGCCTGACGATCGCAAAGCGGATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS GCA 72 bp | TCGCCTGCGCCTGATTCCACGACAACATTGAAGCCCTaGTTGACCAGGGCCTGGACCCCCGCAGGAGACAAT | + |
Preference number: 6 (lower is better) Translates to: SPAPDSTTTLKP*LTRAWTPAGDN Trigger: ATTGTCTCCTGCGGGGGTCCAGGCCCTGGTCAAGCAGGGCTTCAATGTTGTCGTGGAATCAGGCGCAGGCGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS CAA 72 bp | CCTGCGCCTGATTCCACGACAACATTGAAGCCCTGCTaGACCAGGGCCTGGACCCCCGCAGGAGACAATGCA | + |
Preference number: 6 (lower is better) Translates to: PAPDSTTTLKPC*TRAWTPAGDNA Trigger: TGCATTGTCTCCTGCGGGGGTCCAGGCCCTGGTCAAGCAGGGCTTCAATGTTGTCGTGGAATCAGGCGCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS CAA 90 bp | GAAGCTTCGCCTGCGCCTGATTCCACGACAACATTGAAGCCCTGCTaGACCAGGGCCTGGACCCCCGCAGGAGACAATGCAACTCGCTTC | + |
Preference number: 6 (lower is better) Translates to: EASPAPDSTTTLKPC*TRAWTPAGDNATRF Trigger: GAAGCGAGTTGCATTGTCTCCTGCGGGGGTCCAGGCCCTGGTCAAGCAGGGCTTCAATGTTGTCGTGGAATCAGGCGCAGGCGAAGCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS GCA 72 bp | GCGGTTCATGGCCACACACATGATGTACGACAGGATTaGACCAGAGGAGCCGATGAGCGCGCCCACGATGGT | + |
Preference number: 6 (lower is better) Translates to: AVHGHTHDVRQD*TRGADERAHDG Trigger: ACCATCGTGGGCGCGCTCATCGGCTCCTCTGGTGCAATCCTGTCGTACATCATGTGTGTGGCCATGAACCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS CCA 72 bp | TCCACGACAACATTGAAGCCCTGCTTGACCAGGGCCTaGACCCCCGCAGGAGACAATGCAACTCGCTTCTCG | + |
Preference number: 6 (lower is better) Translates to: STTTLKPCLTRA*TPAGDNATRFS Trigger: CGAGAAGCGAGTTGCATTGTCTCCTGCGGGGGTCCAGGCCCTGGTCAAGCAGGGCTTCAATGTTGTCGTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS CAA 90 bp | TCTGGGAACTTGGAAGCTTCGCCTGCGCCTGATTCCACGACAACATaGAAGCCCTGCTTGACCAGGGCCTGGACCCCCGCAGGAGACAAT | + |
Preference number: 6 (lower is better) Translates to: SGNLEASPAPDSTTT*KPCLTRAWTPAGDN Trigger: ATTGTCTCCTGCGGGGGTCCAGGCCCTGGTCAAGCAGGGCTTCAATGTTGTCGTGGAATCAGGCGCAGGCGAAGCTTCCAAGTTCCCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS CAA 90 bp | AAATCTGGATCCGCTTTGCGATCGTCAGGCCGATGGTGCCACCCATaGCCATTGCTCCAGACATCTGAGCTAACAGCTGCGGGTCCGGCT | + |
Preference number: 6 (lower is better) Translates to: KSGSALRSSGRWCHP*PLLQTSELTAAGPA Trigger: AGCCGGACCCGCAGCTGTTAGCTCAGATGTCTGGAGCAATGGCAATGGGTGGCACCATCGGCCTGACGATCGCAAAGCGGATCCAGATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS CAA 90 bp | GGAAAGCAGCGACCAACTGAGGCAAGTCGGAAATCTGGATCCGCTTaGCGATCGTCAGGCCGATGGTGCCACCCATTGCCATTGCTCCAG | + |
Preference number: 6 (lower is better) Translates to: GKQRPTEASRKSGSA*RSSGRWCHPLPLLQ Trigger: CTGGAGCAATGGCAATGGGTGGCACCATCGGCCTGACGATCGCAAAGCGGATCCAGATTTCCGACTTGCCTCAGTTGGTCGCTGCTTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS CCA 72 bp | GGGCCCCTGCTGCTCTGTAGAGGTCATCTGGGAACTTaGAAGCTTCGCCTGCGCCTGATTCCACGACAACAT | + |
Preference number: 6 (lower is better) Translates to: GPLLLCRGHLGT*KLRLRLIPRQH Trigger: ATGTTGTCGTGGAATCAGGCGCAGGCGAAGCTTCCAAGTTCCCAGATGACCTCTACAGAGCAGCAGGGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS CCA 72 bp | GGTGATGCCCGTGGTAAAGCTAGGGTCAGCCATAAATaGGATTATCCCACCCACGCTAGCAGCCAGCAGGCC | + |
Preference number: 6 (lower is better) Translates to: GDARGKARVSHK*DYPTHASSQQA Trigger: GGCCTGCTGGCTGCTAGCGTGGGTGGGATAATCCCATTTATGGCTGACCCTAGCTTTACCACGGGCATCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS CAA 72 bp | TCCGCTTTGCGATCGTCAGGCCGATGGTGCCACCCATaGCCATTGCTCCAGACATCTGAGCTAACAGCTGCG | + |
Preference number: 6 (lower is better) Translates to: SALRSSGRWCHP*PLLQTSELTAA Trigger: CGCAGCTGTTAGCTCAGATGTCTGGAGCAATGGCAATGGGTGGCACCATCGGCCTGACGATCGCAAAGCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS CAA 72 bp | CGACCAACTGAGGCAAGTCGGAAATCTGGATCCGCTTaGCGATCGTCAGGCCGATGGTGCCACCCATTGCCA | + |
Preference number: 6 (lower is better) Translates to: RPTEASRKSGSA*RSSGRWCHPLP Trigger: TGGCAATGGGTGGCACCATCGGCCTGACGATCGCAAAGCGGATCCAGATTTCCGACTTGCCTCAGTTGGTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS GCA 72 bp | CAAAGCAGCAGCTCTTGTATCAAATCCTCGGACAACTaGGCCCATCGACTTTGCTGCCCCCGCAGAAGCGAG | + |
Preference number: 6 (lower is better) Translates to: QSSSSCIKSSDN*AHRLCCPRRSE Trigger: CTCGCTTCTGCGGGGGCAGCAAAGTCGATGGGCGCAGTTGTCCGAGGATTTGATACAAGAGCTGCTGCTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS CAA 72 bp | GCGCCTAACGTCGGGTTCACCATGGGGGCCCTCACTTaGACCACCAGATCAGAAGCCAGAACTTCCTTCATC | + |
Preference number: 6 (lower is better) Translates to: APNVGFTMGALT*TTRSEARTSFI Trigger: GATGAAGGAAGTTCTGGCTTCTGATCTGGTGGTCAAAGTGAGGGCCCCCATGGTGAACCCGACGTTAGGCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS TCA 72 bp | GAGGTCATCTGGGAACTTGGAAGCTTCGCCTGCGCCTaGTTCCACGACAACATTGAAGCCCTGCTTGACCAG | + |
Preference number: 6 (lower is better) Translates to: EVIWELGSFACA*FHDNIEALLDQ Trigger: CTGGTCAAGCAGGGCTTCAATGTTGTCGTGGAATCAGGCGCAGGCGAAGCTTCCAAGTTCCCAGATGACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS CAA 72 bp | GACCACCAGATCAGAAGCCAGAACTTCCTTCATCCCTaGGATCTGGGCCCCTGCTGCTCTGTAGAGGTCATC | + |
Preference number: 6 (lower is better) Translates to: DHQIRSQNFLHP*DLGPCCSVEVI Trigger: GATGACCTCTACAGAGCAGCAGGGGCCCAGATCCAAGGGATGAAGGAAGTTCTGGCTTCTGATCTGGTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS TCA 72 bp | GGGCCCCAACACAGCACAAGCCTGAGCCCAGGTACATaGTTTCTTCGATGTTATAGCCACCGTAGAGAGCAG | + |
Preference number: 6 (lower is better) Translates to: GPQHSTSLSPGT*FLRCYSHRREQ Trigger: CTGCTCTCTACGGTGGCTATAACATCGAAGAAATCATGTACCTGGGCTCAGGCTTGTGCTGTGTTGGGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS GCA 72 bp | CAGAACTTCCTTCATCCCTTGGATCTGGGCCCCTGCTaGTCTGTAGAGGTCATCTGGGAACTTGGAAGCTTC | + |
Preference number: 6 (lower is better) Translates to: QNFLHPLDLGPC*SVEVIWELGSF Trigger: GAAGCTTCCAAGTTCCCAGATGACCTCTACAGAGCAGCAGGGGCCCAGATCCAAGGGATGAAGGAAGTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS GCA 72 bp | GACCAACTGAGGCAAGTCGGAAATCTGGATCCGCTTTaGGATCGTCAGGCCTGGAATCAGAGCTGTGCTGAT | + |
Preference number: 6 (lower is better) Translates to: DQLRQVGNLDPL*DRQAWNQSCAD Trigger: ATCAGCACAGCTCTGATTCCAGGCCTGACGATCGCAAAGCGGATCCAGATTTCCGACTTGCCTCAGTTGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069902.13 |
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CDS GCA 72 bp | AAATCTGGATCCGCTTTGCGATCGTCAGGCCGATGGTaGCACCCATTGCCATTGCTCCAGACATCTGAGCTA | + |
Preference number: 6 (lower is better) Translates to: KSGSALRSSGRW*HPLPLLQTSEL Trigger: TAGCTCAGATGTCTGGAGCAATGGCAATGGGTGGCACCATCGGCCTGACGATCGCAAAGCGGATCCAGATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS CCA 72 bp | GTCGGAAATCTGGATCCGCTTTGCGATCGTCAGGCCTaGAATCAGAGCTGTGCTGATAAGGATGTCCACCTC | + |
Preference number: 6 (lower is better) Translates to: VGNLDPLCDRQA*NQSCADKDVHL Trigger: GAGGTGGACATCCTTATCAGCACAGCTCTGATTCCAGGCCTGACGATCGCAAAGCGGATCCAGATTTCCGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069902.13 |
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CDS CAA 72 bp | TCCCGAACTTTGGCCTGCAGAGCGTCACATGTCTTCTaGGCGTCCCCCAGAAGCATAGCTGTGTTAGGTTTG | + |
Preference number: 6 (lower is better) Translates to: SRTLACRASHVF*ASPRSIAVLGL Trigger: CAAACCTAACACAGCTATGCTTCTGGGGGACGCCAAGAAGACATGTGACGCTCTGCAGGCCAAAGTTCGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS CAA 90 bp | CCTCACTTTGACCACCAGATCAGAAGCCAGAACTTCCTTCATCCCTaGGATCTGGGCCCCTGCTGCTCTGTAGAGGTCATCTGGGAACTT | + |
Preference number: 6 (lower is better) Translates to: PHFDHQIRSQNFLHP*DLGPCCSVEVIWEL Trigger: AAGTTCCCAGATGACCTCTACAGAGCAGCAGGGGCCCAGATCCAAGGGATGAAGGAAGTTCTGGCTTCTGATCTGGTGGTCAAAGTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS TCA 72 bp | CCTGGCTTTACCGGGGATTTACACCACAGTGCCTGGTaGGTACGAAGCGTTCGTACAAAGTCTCTCTTCCCA | + |
Preference number: 6 (lower is better) Translates to: PGFTGDLHHSAW*VRSVRTKSLFP Trigger: TGGGAAGAGAGACTTTGTACGAACGCTTCGTACTCACCAGGCACTGTGGTGTAAATCCCCGGTAAAGCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS TCA 72 bp | ATTAGAGTTCCTGATGGCTTTAAAAAGTCAGCTTCGTaGGCGCCTAACGTCGGGTTCACCATGGGGGCCCTC | + |
Preference number: 6 (lower is better) Translates to: IRVPDGFKKSAS*APNVGFTMGAL Trigger: GAGGGCCCCCATGGTGAACCCGACGTTAGGCGCTCACGAAGCTGACTTTTTAAAGCCATCAGGAACTCTAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS CAA 72 bp | TCTCTCTTCCCAGGTAGAACCTTAGAGGACCCCAAGTaGCTAAGGAAAGGACATGAACAGCCAGCCACCACC | + |
Preference number: 6 (lower is better) Translates to: SLFPGRTLEDPK*LRKGHEQPATT Trigger: GGTGGTGGCTGGCTGTTCATGTCCTTTCCTTAGCAACTTGGGGTCCTCTAAGGTTCTACCTGGGAAGAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS TCA 72 bp | TCAGTAAGCATCTTCACCAAATCGGCAATGGGGTACTaGGCTTTAGCAGCACAGAGCCCATACCCTGGAGTA | + |
Preference number: 6 (lower is better) Translates to: SVSIFTKSAMGY*ALAAQSPYPGV Trigger: TACTCCAGGGTATGGGCTCTGTGCTGCTAAAGCTCAGTACCCCATTGCCGATTTGGTGAAGATGCTTACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS GCA 72 bp | TGGAATTCCTGGCTTTACCGGGGATTTACACCACAGTaGCTGGTGAGTACGAAGCGTTCGTACAAAGTCTCT | + |
Preference number: 6 (lower is better) Translates to: WNSWLYRGFTPQ*LVSTKRSYKVS Trigger: AGAGACTTTGTACGAACGCTTCGTACTCACCAGGCACTGTGGTGTAAATCCCCGGTAAAGCCAGGAATTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS TCA 72 bp | ACCGGCATGCCTGCAATTATAGAATTGGGGTCTTCTTaGGCCGCTGAATTCACAGTGTCGTTTGCTCCAATG | + |
Preference number: 6 (lower is better) Translates to: TGMPAIIELGSS*AAEFTVSFAPM Trigger: CATTGGAGCAAACGACACTGTGAATTCAGCGGCTCAAGAAGACCCCAATTCTATAATTGCAGGCATGCCGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS CCA 72 bp | ACTGAGAGCATCATAGCCCTGAGCTATTGTCACTCTTaGAACCTGGTCCATCGCCAGAACTGTGGTTTTTCT | + |
Preference number: 6 (lower is better) Translates to: TESIIALSYCHS*NLVHRQNCGFS Trigger: AGAAAAACCACAGTTCTGGCGATGGACCAGGTTCCAAGAGTGACAATAGCTCAGGGCTATGATGCTCTCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS TCA 72 bp | CTTGAGCCGCTGAATTCACAGTGTCGTTTGCTCCAATaGCAAGAACCAAGTCGGTGTCTGGAAAATCACTGT | + |
Preference number: 6 (lower is better) Translates to: LEPLNSQCRLLQ*QEPSRCLENHC Trigger: ACAGTGATTTTCCAGACACCGACTTGGTTCTTGTCATTGGAGCAAACGACACTGTGAATTCAGCGGCTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS TCA 72 bp | ACAGATAATTATACTCTGGAGGGTCCGTGGGTCGCTTaGACATGTCCAGCATTCTCTGAGTCACCAGAAAAC | + |
Preference number: 6 (lower is better) Translates to: TDNYTLEGPWVA*TCPAFSESPEN Trigger: GTTTTCTGGTGACTCAGAGAATGCTGGACATGTTCAAGCGACCCACGGACCCTCCAGAGTATAATTATCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS TCA 72 bp | TCAAGTCAACCTCCAAGGGTTCAGCACCAAGGGATTTaGACTGTTCCAAAGCAGCAGCTCTTGTATCAAATC | + |
Preference number: 6 (lower is better) Translates to: SSQPPRVQHQGI*TVPKQQLLYQI Trigger: GATTTGATACAAGAGCTGCTGCTTTGGAACAGTTCAAATCCCTTGGTGCTGAACCCTTGGAGGTTGACTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS TCA 72 bp | CGCCGATGTAAGTGCCAAGGTAAGCCACAATCTTGGTaGAATTTGACGTGGCATCCATTGCAAAATGTGGAT | + |
Preference number: 6 (lower is better) Translates to: RRCKCQGKPQSW*NLTWHPLQNVD Trigger: ATCCACATTTTGCAATGGATGCCACGTCAAATTTCACCAAGATTGTGGCTTACCTTGGCACTTACATCGGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS TCA 72 bp | GCCTGCAATTATAGAATTGGGGTCTTCTTGAGCCGCTaGATTCACAGTGTCGTTTGCTCCAATGACAAGAAC | + |
Preference number: 6 (lower is better) Translates to: ACNYRIGVFLSR*IHSVVCSNDKN Trigger: GTTCTTGTCATTGGAGCAAACGACACTGTGAATTCAGCGGCTCAAGAAGACCCCAATTCTATAATTGCAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000223268.2 |
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CDS CAA 90 bp | TGGAATCAGAGCTGTGCTGATAAGGATGTCCACCTCCTTGCACTGTaGAGCAAAGAGCTTCATTTCAGCTTCAATGAACTCTTTGGACAT | + |
Preference number: 6 (lower is better) Translates to: WNQSCADKDVHLLAL*SKELHFSFNELFGH Trigger: ATGTCCAAAGAGTTCATTGAAGCTGAAATGAAGCTCTTTGCTCAACAGTGCAAGGAGGTGGACATCCTTATCAGCACAGCTCTGATTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS GCA 72 bp | AATAACAATGCTGTTAGCTTCCCGGATCATCTCAACTaGGTTGTCCAGGTTGATTTCTGTATGTGTGCCAGA | + |
Preference number: 6 (lower is better) Translates to: NNNAVSFPDHLN*VVQVDFCMCAR Trigger: TCTGGCACACATACAGAAATCAACCTGGACAACGCAGTTGAGATGATCCGGGAAGCTAACAGCATTGTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |
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CDS TCA 72 bp | GTAAGTGCCAAGGTAAGCCACAATCTTGGTGAAATTTaGCGTGGCATCCATTGCAAAATGTGGATACTCTAC | + |
Preference number: 6 (lower is better) Translates to: VSAKVSHNLGEI*RGIHCKMWILY Trigger: GTAGAGTATCCACATTTTGCAATGGATGCCACGTCAAATTTCACCAAGATTGTGGCTTACCTTGGCACTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069902.13 ENSMUST00000099149.10 ENSMUST00000109204.8 ENSMUST00000223268.2 |