RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NNMT (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032271

Ensembl transcript IDs: ENSMUST00000034808.12, ENSMUST00000119426.2

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 72 bp AAGAGTAATTTTGAGAAATCACCTCAAACTGCTCAATaGTGTAACCGGCCTCTTCCACAGCATCTCGAACAG +
Preference number: 3 (lower is better)
Translates to: KSNFEKSPQTAQ*CNRPLPQHLEQ
Trigger: CTGTTCGAGATGCTGTGGAAGAGGCCGGTTACACCATTGAGCAGTTTGAGGTGATTTCTCAAAATTACTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119426.2
CDS-3UTR CCA 90 bp CTGCTCAATGGTGTAACCGGCCTCTTCCACAGCATCTCGAACAGTCTCCCATCCCACCAGGAAGCCTCCTaGCTTGAGCAGACTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LLNGVTGLFHSISNSLPSHQEAS*LEQTAQ
Trigger: CTGGGCAGTCTGCTCAAGCCAGGAGGCTTCCTGGTG...GGATGGGAGACTGTTCGAGATGCTGTGGAAGAGGCCGGTTACACCATTGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119426.2
CDS-3UTR CCA 90 bp CCACAGCATCTCGAACAGTCTCCCATCCCAGGGGAAGGCTGGAAAACTTCTGCTCACATAGGTGACCACTaGGGACCAGTCAAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: PQHLEQSPIPGEGWKTSAHIGDH*GPVKGS
Trigger: GGAGCCTTTGACTGGTCCCCAGTGGTCACCTATGTG...AGCAGAAGTTTTCCAGCCTTCCCCTGGGATGGGAGACTGTTCGAGATGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119426.2
CDS-3UTR CCA 90 bp CTGCTCAATGGTGTAACCGGCCTCTTCCACAGCATCTCGAACAGTCTCCCATCCAGAGAAGCTGATAGATaGTGGGGCCAGAGCCAATGT +
Preference number: 4 (lower is better)
Translates to: LLNGVTGLFHSISNSLPSREADR*WGQSQC
Trigger: ACATTGGCTCTGGCCCCACCATCTATCAGCTTCTCT...GGATGGGAGACTGTTCGAGATGCTGTGGAAGAGGCCGGTTACACCATTGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119426.2
CDS-3UTR GCA 90 bp TCTTCCACAGCATCTCGAACAGTCTCCCATCCCAGGGGAAGGCTGGAAAACTTCTTCTTCAGCCATTTCTaGAGCTCCCAGAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SSTASRTVSHPRGRLENFFFSHF*SSQRFW
Trigger: CCAGAACCTCTGGGAGCTGCAGAAATGGCTGAAGAA...GAAGTTTTCCAGCCTTCCCCTGGGATGGGAGACTGTTCGAGATGCTGTGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119426.2
CDS-3UTR GCA 90 bp TCTTCCACAGCATCTCGAACAGTCTCCCATCCCAGGGGAAGGCTGGAAAACTTCAGGTTCCTGCTTGATTaGACGCCTCAACTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SSTASRTVSHPRGRLENFRFLLD*TPQLLL
Trigger: GAGGAGAAGTTGAGGCGTGCAATCAAGCAGGAACCT...GAAGTTTTCCAGCCTTCCCCTGGGATGGGAGACTGTTCGAGATGCTGTGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119426.2
CDS-3UTR TCA 90 bp GAGAAATCACCTCAAACTGCTCAATGGTGTAACCGGCCTCTTCCACAGCATCTCGATCACACACATAGGTaGCCACTGGGGACCAGTCAA +
Preference number: 4 (lower is better)
Translates to: EKSPQTAQWCNRPLPQHLDHTHR*PLGTSQ
Trigger: TTGACTGGTCCCCAGTGGTCACCTATGTGTGTGATC...GAGATGCTGTGGAAGAGGCCGGTTACACCATTGAGCAGTTTGAGGTGATTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119426.2
CDS-3UTR GCA 90 bp CCACAGCATCTCGAACAGTCTCCCATCCCAGGGGAAGGCTGGAAAACTTCTGCTGTCCCTTCATTCTGTTaGCTTCAAGATCACACACAT +
Preference number: 4 (lower is better)
Translates to: PQHLEQSPIPGEGWKTSAVPSFC*LQDHTH
Trigger: ATGTGTGTGATCTTGAAGGCAACAGAATGAAGGGAC...AGCAGAAGTTTTCCAGCCTTCCCCTGGGATGGGAGACTGTTCGAGATGCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119426.2
CDS-3UTR TCA 90 bp AAGAGTAATTTTGAGAAATCACCTCAAACTGCTCAATGGTGTAACCGGCCTCTTTTTTCAGCAGATGTCTaGGGATCTCGTTTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: KSNFEKSPQTAQWCNRPLFSADV*GSRFLH
Trigger: GTGCAGAAAACGAGATCCTCAGACATCTGCTGAAAA...AAGAGGCCGGTTACACCATTGAGCAGTTTGAGGTGATTTCTCAAAATTACTCTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000119426.2
3UTR CAA 72 bp GAGTCCTTCATTATTGGATGTGGTAGAAGAGTAATTTaGAGAAATCACCTCAAACTGCTCAATGGTGTAACC +
Preference number: 4 (lower is better)
Translates to: ESFIIGCGRRVI*RNHLKLLNGVT
Trigger: GGTTACACCATTGAGCAGTTTGAGGTGATTTCTCAAAATTACTCTTCTACCACATCCAATAATGAAGGACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119426.2
CDS CCA 90 bp GTAGTAGCTACTCTTCAGGGCATCTACCATCACCAGGAAGCCTCCTaGCTTGAGCAGACTGCCCAGGTTCCTGAGGGCAGTGCGATAGGC +
Preference number: 5 (lower is better)
Translates to: VVATLQGIYHHQEAS*LEQTAQVPEGSAIG
Trigger: GCCTATCGCACTGCCCTCAGGAACCTGGGCAGTCTGCTCAAGCCAGGAGGCTTCCTGGTGATGGTAGATGCCCTGAAGAGTAGCTACTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034808.12
CDS-3UTR CAA 90 bp ATTCAGATCTGCCTGGCTTTCGCCCCACTAGGGAGAAGAGTCCTTCATTATTGGGGTCCCTTCATTCTGTaGCCTTCAAGATCACACACA +
Preference number: 5 (lower is better)
Translates to: IQICLAFAPLGRRVLHYWGPFIL*PSRSHT
Trigger: TGTGTGTGATCTTGAAGGCAACAGAATGAAGGGACC...CCAATAATGAAGGACTCTTCTCCCTAGTGGGGCGAAAGCCAGGCAGATCTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119426.2
CDS-3UTR CAA 90 bp GGAGAAGAGTCCTTCATTATTGGATGTGGTAGAAGAGTAATTTTGAGAAATCACAGGAAGCCTCCTGGCTaGAGCAGACTGCCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: GEESFIIGCGRRVILRNHRKPPG*SRLPRF
Trigger: GAACCTGGGCAGTCTGCTCAAGCCAGGAGGCTTCCT...GTGATTTCTCAAAATTACTCTTCTACCACATCCAATAATGAAGGACTCTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119426.2
CDS TCA 72 bp GCCTCCTGGCTTGAGCAGACTGCCCAGGTTCCTGCTTaGTTGCACGCCTCAACTTCTCCTCCTTCTCAGGTC +
Preference number: 6 (lower is better)
Translates to: ASWLEQTAQVPA*LHASTSPPSQV
Trigger: GACCTGAGAAGGAGGAGAAGTTGAGGCGTGCAATCAAGCAGGAACCTGGGCAGTCTGCTCAAGCCAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119426.2
CDS GCA 72 bp AGAGGCTGGCTCTGGGTCACATCACACTTTAGTACCTaGTTGATTGCACGCCTCAACTTCTCCTCCTTCTCA +
Preference number: 6 (lower is better)
Translates to: RGWLWVTSHFST*LIARLNFSSFS
Trigger: TGAGAAGGAGGAGAAGTTGAGGCGTGCAATCAAGCAGGTACTAAAGTGTGATGTGACCCAGAGCCAGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034808.12