Pregenerated sensors for NNAT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067786Ensembl transcript IDs: ENSMUST00000088484.6, ENSMUST00000109526.2, ENSMUST00000153739.9, ENSMUST00000172487.2, ENSMUST00000173041.8, ENSMUST00000173595.2, ENSMUST00000173793.8, ENSMUST00000173839.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGTCGAGAAGCACAGGAGCACCTGATGACACGGCCGCCCAGGGCTaGGAGCTGGGGCCTCAGTTGGGGGCTCGCTGCCTGCGCTCCCCC | + |
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Preference number: 1 (lower is better) Translates to: WSRSTGAPDDTAAQG*ELGPQLGARCLRSP Trigger: GGGGGAGCGCAGGCAGCGAGCCCCCAACTGAGGCCCCAGCTCCCAGCCCTGGGCGGCCGTGTCATCAGGTGCTCCTGTGCTTCTCGACCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173041.8 |
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| 3UTR TCA 90 bp | CTGGTTGATGGGCTGTTCGATCTTCATGGTAGGATCTTGTGCGGCTaGGATGGTACTGTTCCGACTTGGTCCAGATCAGAATGTGGTGCC | + |
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Preference number: 1 (lower is better) Translates to: LVDGLFDLHGRILCG*DGTVPTWSRSECGA Trigger: GGCACCACATTCTGATCTGGACCAAGTCGGAACAGTACCATCTCAGCCGCACAAGATCCTACCATGAAGATCGAACAGCCCATCAACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173595.2 ENSMUST00000173839.2 |
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| 3UTR GCA 90 bp | CACCGAGATGTAGGGCTTCAGCTGGTGATGTCAGAATGTCCATTCTaGTGGTTGATGGGCTGTTCGATCTTCATGGTAGGATCTTGTGCG | + |
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Preference number: 1 (lower is better) Translates to: HRDVGLQLVMSECPF*WLMGCSIFMVGSCA Trigger: CGCACAAGATCCTACCATGAAGATCGAACAGCCCATCAACCAGCAGAATGGACATTCTGACATCACCAGCTGAAGCCCTACATCTCGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173595.2 ENSMUST00000173839.2 |
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| 3UTR CCA 90 bp | CGAGATGTAGGGCTTCAGCTGGTGATGTCAGAATGTCCATTCTGCTaGTTGATGGGCTGTTCGATCTTCATGGTAGGATCTTGTGCGGCT | + |
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Preference number: 1 (lower is better) Translates to: RDVGLQLVMSECPFC*LMGCSIFMVGSCAA Trigger: AGCCGCACAAGATCCTACCATGAAGATCGAACAGCCCATCAACCAGCAGAATGGACATTCTGACATCACCAGCTGAAGCCCTACATCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173595.2 ENSMUST00000173839.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCATTCCTGCGCGGCACTGGCTCCCATGCTGGTCGAGAAGCACAGGAGCACCTGGCAAGTGCTCCTCTaGCGAGGGAACACAGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: PHSCAALAPMLVEKHRSTWQVLL*RGNTGD Trigger: GTCCCCTGTGTTCCCTCGTCAGAGGAGCACTTGCCA...GGTGCTCCTGTGCTTCTCGACCAGCATGGGAGCCAGTGCCGCGCAGGAATGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173041.8 ENSMUST00000173839.2 |
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| 3UTR-3UTR CCA 90 bp | CCATGCTGGTCGAGAAGCACAGGAGCACCTGATGACACGGCCGCCCAGGGCTGGATTCCTGCGCGGCACTaGCTCCCATGCTGGTCGAGA | + |
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Preference number: 2 (lower is better) Translates to: PCWSRSTGAPDDTAAQGWIPARH*LPCWSR Trigger: TCTCGACCAGCATGGGAGCCAGTGCCGCGCAGGAAT...CCAGCCCTGGGCGGCCGTGTCATCAGGTGCTCCTGTGCTTCTCGACCAGCATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173041.8 ENSMUST00000173839.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCTGGGGGCCTACCGGCCCCTCACTGACCTTGGCAAGTGCTCCTCTGACGAGCGGCACTGGCTCCCATaGTGGTCGAGAAGCACAGGA | + |
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Preference number: 2 (lower is better) Translates to: FLGAYRPLTDLGKCSSDERHWLP*WSRSTG Trigger: TCCTGTGCTTCTCGACCAGCATGGGAGCCAGTGCCG...CTCGTCAGAGGAGCACTTGCCAAGGTCAGTGAGGGGCCGGTAGGCCCCCAGAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173041.8 ENSMUST00000173839.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGGGGCAAAGGGGCTGGGAAGGGAACTGATATCTTCATCATTGTCGGTGCTGCAGTTGGGGGCTCGCTaGCTGCGCTCCCCCAGCACC | + |
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Preference number: 2 (lower is better) Translates to: TGAKGLGRELISSSLSVLQLGAR*LRSPST Trigger: GGTGCTGGGGGAGCGCAGGCAGCGAGCCCCCAACTG...CAGCACCGACAATGATGAAGATATCAGTTCCCTTCCCAGCCCCTTTGCCCCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000173041.8 |
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| 3UTR-3UTR CCA 90 bp | TACCGGCCCCTCACTGACCTTGGCAAGTGCTCCTCTGACGAGGGAACACAGGGGCACTGGCTCCCATGCTaGTCGAGAAGCACAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: YRPLTDLGKCSSDEGTQGHWLPC*SRSTGA Trigger: TGCTCCTGTGCTTCTCGACCAGCATGGGAGCCAGTG...CCCCTGTGTTCCCTCGTCAGAGGAGCACTTGCCAAGGTCAGTGAGGGGCCGGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173041.8 ENSMUST00000173839.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGAGATGGTACTGTTCCGACTTGGTCCAGATCAGAATGTGGTGCCTACGCCCGTCCGGGACACCGTGTaGGCCAGCTTCTGCAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: AEMVLFRLGPDQNVVPTPVRDTV*ASFCRE Trigger: CTCCCTGCAGAAGCTGGCGCACACGGTGTCCCGGAC...GGGCGTAGGCACCACATTCTGATCTGGACCAAGTCGGAACAGTACCATCTCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173041.8 |
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| 3UTR-3UTR CCA 90 bp | CCCGCCGGTAGTGGGACAGGGGCAAAGGGGCTGGGAAGGGAACTGATATCTTCACACTGGCTCCCATGCTaGTCGAGAAGCACAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: PAGSGTGAKGLGRELISSHWLPC*SRSTGA Trigger: TGCTCCTGTGCTTCTCGACCAGCATGGGAGCCAGTG...TGAAGATATCAGTTCCCTTCCCAGCCCCTTTGCCCCTGTCCCACTACCGGCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173041.8 ENSMUST00000173839.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCCACCCGCCGGTAGTGGGACAGGGGCAAAGGGGCTGGGAAGGGAACTGATACTTCATCATTGTCGGTaGTGCTTTTCTGGGGGCCTA | + |
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Preference number: 2 (lower is better) Translates to: LPPAGSGTGAKGLGRELILHHCR*CFSGGL Trigger: TAGGCCCCCAGAAAAGCAGCACCGACAATGATGAAG...TATCAGTTCCCTTCCCAGCCCCTTTGCCCCTGTCCCACTACCGGCGGGTGGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173041.8 ENSMUST00000173595.2 ENSMUST00000173839.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGGAACTGATATCTTCATCATTGTCGGTGCTGCTTTTCTGGGGGCCTACCGGCTACCGGCCCCTCACTaGCCTTGGCAAGTGCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: KGTDIFIIVGAAFLGAYRLPAPH*PWQVLL Trigger: GAGGAGCACTTGCCAAGGTCAGTGAGGGGCCGGTAG...CCGGTAGGCCCCCAGAAAAGCAGCACCGACAATGATGAAGATATCAGTTCCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173041.8 ENSMUST00000173839.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGAGATGGTACTGTTCCGACTTGGTCCAGATCAGAATGTGGTGCCTACGCCCCACTGGCTCCCATGCTaGTCGAGAAGCACAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: AEMVLFRLGPDQNVVPTPHWLPC*SRSTGA Trigger: TGCTCCTGTGCTTCTCGACCAGCATGGGAGCCAGTG...GGGCGTAGGCACCACATTCTGATCTGGACCAAGTCGGAACAGTACCATCTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173041.8 ENSMUST00000173839.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGGATCTTGTGCGGCTGAGATGGTACTGTTCCGACTTGGTCCAGATCAGAATTGGCAAGTGCTCCTCTaGCGAGGGAACACAGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: VGSCAAEMVLFRLGPDQNWQVLL*RGNTGD Trigger: GTCCCCTGTGTTCCCTCGTCAGAGGAGCACTTGCCA...ATTCTGATCTGGACCAAGTCGGAACAGTACCATCTCAGCCGCACAAGATCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173041.8 ENSMUST00000173839.2 |
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| 3UTR-3UTR CCA 90 bp | CCATGCTGCACACAGTTGACACTTTCTCTTCTGCACCGAGATGTAGGGCTTCAGCACTGGCTCCCATGCTaGTCGAGAAGCACAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: PCCTQLTLSLLHRDVGLQHWLPC*SRSTGA Trigger: TGCTCCTGTGCTTCTCGACCAGCATGGGAGCCAGTG...CTGAAGCCCTACATCTCGGTGCAGAAGAGAAAGTGTCAACTGTGTGCAGCATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173839.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGATGTCAGAATGTCCATTCTGCTGGTTGATGGGCTGTTCGATCTTCATGGTTGGCAAGTGCTCCTCTaGCGAGGGAACACAGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: GDVRMSILLVDGLFDLHGWQVLL*RGNTGD Trigger: GTCCCCTGTGTTCCCTCGTCAGAGGAGCACTTGCCA...ACCATGAAGATCGAACAGCCCATCAACCAGCAGAATGGACATTCTGACATCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173839.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTCCATTCTGCTGGTTGATGGGCTGTTCGATCTTCATGGTAGGATCTTGTGCCGGCACTGGCTCCCATaGTGGTCGAGAAGCACAGGA | + |
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Preference number: 2 (lower is better) Translates to: MSILLVDGLFDLHGRILCRHWLP*WSRSTG Trigger: TCCTGTGCTTCTCGACCAGCATGGGAGCCAGTGCCG...GCACAAGATCCTACCATGAAGATCGAACAGCCCATCAACCAGCAGAATGGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173839.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAGATGGTACTGTTCCGACTTGGTCCAGATCAGAATGTGGTGCCTACGCCCAGGCTGGGAAGGGAACTaGTATCTTCATCATTGTCGG | + |
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Preference number: 2 (lower is better) Translates to: LRWYCSDLVQIRMWCLRPGWEGN*YLHHCR Trigger: CCGACAATGATGAAGATATCAGTTCCCTTCCCAGCC...TGGGCGTAGGCACCACATTCTGATCTGGACCAAGTCGGAACAGTACCATCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173041.8 ENSMUST00000173595.2 ENSMUST00000173839.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGGGAAGGGAACTGATATCTTCATCATTGTCGGTGCTGCTTTTCTGGGGGCCCTTCATCATTGTCGGTaGTGCTTTTCTGGGGGCCTA | + |
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Preference number: 2 (lower is better) Translates to: AGKGTDIFIIVGAAFLGALHHCR*CFSGGL Trigger: TAGGCCCCCAGAAAAGCAGCACCGACAATGATGAAG...GGCCCCCAGAAAAGCAGCACCGACAATGATGAAGATATCAGTTCCCTTCCCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173041.8 ENSMUST00000173595.2 ENSMUST00000173839.2 |
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| 3UTR CAA 90 bp | GATGTAGGGCTTCAGCTGGTGATGTCAGAATGTCCATTCTGCTGGTaGATGGGCTGTTCGATCTTCATGGTAGGATCTTGTGCGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: DVGLQLVMSECPFCW*MGCSIFMVGSCAAE Trigger: CTCAGCCGCACAAGATCCTACCATGAAGATCGAACAGCCCATCAACCAGCAGAATGGACATTCTGACATCACCAGCTGAAGCCCTACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173595.2 ENSMUST00000173839.2 |
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| 3UTR-3UTR TCA 90 bp | CCGGGGGTTAGAGAACGTGTTTTGGTAAAGGTGGGATTCAATTACTGGTTGAATTGGCAAGTGCTCCTCTaGCGAGGGAACACAGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: PGVRERVLVKVGFNYWLNWQVLL*RGNTGD Trigger: GTCCCCTGTGTTCCCTCGTCAGAGGAGCACTTGCCA...ATTCAACCAGTAATTGAATCCCACCTTTACCAAAACACGTTCTCTAACCCCCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173839.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGACACTTTCTCTTCTGCACCGAGATGTAGGGCTTCAGCTGGTGATGTCAGAACTGACCTTGGCAAGTaGTCCTCTGACGAGGGAACA | + |
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Preference number: 2 (lower is better) Translates to: VDTFSSAPRCRASAGDVRTDLGK*SSDEGT Trigger: TGTTCCCTCGTCAGAGGAGCACTTGCCAAGGTCAGT...TCTGACATCACCAGCTGAAGCCCTACATCTCGGTGCAGAAGAGAAAGTGTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173839.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCCATTCTGCTGGTTGATGGGCTGTTCGATCTTCATGGTAGGATCTTGTGCGACTGACCTTGGCAAGTaGTCCTCTGACGAGGGAACA | + |
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Preference number: 2 (lower is better) Translates to: CPFCWLMGCSIFMVGSCATDLGK*SSDEGT Trigger: TGTTCCCTCGTCAGAGGAGCACTTGCCAAGGTCAGT...CGCACAAGATCCTACCATGAAGATCGAACAGCCCATCAACCAGCAGAATGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173839.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGGAACTGATATCTTCATCATTGTCGGTGCTGCTTTTCTGGGGGCCTACCGGCTTCATCATTGTCGGTaGTGCTTTTCTGGGGGCCTA | + |
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Preference number: 2 (lower is better) Translates to: KGTDIFIIVGAAFLGAYRLHHCR*CFSGGL Trigger: TAGGCCCCCAGAAAAGCAGCACCGACAATGATGAAG...CCGGTAGGCCCCCAGAAAAGCAGCACCGACAATGATGAAGATATCAGTTCCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173041.8 ENSMUST00000173595.2 ENSMUST00000173839.2 |
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| 3UTR-3UTR GCA 90 bp | ACACAGTTGACACTTTCTCTTCTGCACCGAGATGTAGGGCTTCAGCTGGTGATGCAGATCAGAATGTGGTaGCTACGCCCATATCTCGAG | + |
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Preference number: 2 (lower is better) Translates to: TQLTLSLLHRDVGLQLVMQIRMW*LRPYLE Trigger: CTCGAGATATGGGCGTAGGCACCACATTCTGATCTG...CATCACCAGCTGAAGCCCTACATCTCGGTGCAGAAGAGAAAGTGTCAACTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173595.2 ENSMUST00000173839.2 |
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| 3UTR-3UTR GCA 90 bp | GAATGTCCATTCTGCTGGTTGATGGGCTGTTCGATCTTCATGGTAGGATCTTGTACTGACCTTGGCAAGTaGTCCTCTGACGAGGGAACA | + |
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Preference number: 2 (lower is better) Translates to: ECPFCWLMGCSIFMVGSCTDLGK*SSDEGT Trigger: TGTTCCCTCGTCAGAGGAGCACTTGCCAAGGTCAGT...ACAAGATCCTACCATGAAGATCGAACAGCCCATCAACCAGCAGAATGGACATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173839.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGGTGATGTCAGAATGTCCATTCTGCTGGTTGATGGGCTGTTCGATCTTCGGTACTGTTCCGACTTaGTCCAGATCAGAATGTGGT | + |
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Preference number: 2 (lower is better) Translates to: QLVMSECPFCWLMGCSIFGTVPT*SRSECG Trigger: ACCACATTCTGATCTGGACCAAGTCGGAACAGTACC...GAAGATCGAACAGCCCATCAACCAGCAGAATGGACATTCTGACATCACCAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173595.2 ENSMUST00000173839.2 |
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| 3UTR-3UTR GCA 90 bp | CCGGGGGTTAGAGAACGTGTTTTGGTAAAGGTGGGATTCAATTACTGGTTGAATAGGCAGGAATATGTGTaGCATAGGCAAGGGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: PGVRERVLVKVGFNYWLNRQEYV*HRQGAA Trigger: TGCTGCCCCTTGCCTATGGCACACATATTCCTGCCT...ATTCAACCAGTAATTGAATCCCACCTTTACCAAAACACGTTCTCTAACCCCCGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173839.2 |
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| 3UTR CAA 90 bp | GGGATAAGCAAGATCAGTGAAGGGCCGGGGGTTAGAGAACGTGTTTaGGTAAAGGTGGGATTCAATTACTGGTTGAATATATCCAAATCA | + |
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Preference number: 2 (lower is better) Translates to: GISKISEGPGVRERV*VKVGFNYWLNISKS Trigger: TGATTTGGATATATTCAACCAGTAATTGAATCCCACCTTTACCAAAACACGTTCTCTAACCCCCGGCCCTTCACTGATCTTGCTTATCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173839.2 |
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| 3UTR-3UTR TCA 90 bp | ACGTGTTTTGGTAAAGGTGGGATTCAATTACTGGTTGAATATATCCAAATCAAGGGCTGGGAAGGGAACTaGTATCTTCATCATTGTCGG | + |
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Preference number: 2 (lower is better) Translates to: TCFGKGGIQLLVEYIQIKGWEGN*YLHHCR Trigger: CCGACAATGATGAAGATATCAGTTCCCTTCCCAGCC...CTTGATTTGGATATATTCAACCAGTAATTGAATCCCACCTTTACCAAAACACGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173839.2 |
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| 3UTR GCA 72 bp | CAGTTGGGGGCTCGCTGCCTGCGCTCCCCCAGCACCTaGCGCCCGGTCCGGGACACCGTGTGCGCCAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: QLGARCLRSPST*RPVRDTVCASF Trigger: GAAGCTGGCGCACACGGTGTCCCGGACCGGGCGGCAGGTGCTGGGGGAGCGCAGGCAGCGAGCCCCCAACTG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000173041.8 |
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| 3UTR-3UTR CAA 90 bp | CCTACCGGCCCCTCACTGACCTTGGCAAGTGCTCCTCTGACGAGGGAACACAGGGGCCCCTCACTGACCTaGGCAAGTGCTCCTCTGACG | + |
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Preference number: 3 (lower is better) Translates to: PTGPSLTLASAPLTREHRGPSLT*ASAPLT Trigger: CGTCAGAGGAGCACTTGCCAAGGTCAGTGAGGGGCC...CCTGTGTTCCCTCGTCAGAGGAGCACTTGCCAAGGTCAGTGAGGGGCCGGTAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173041.8 ENSMUST00000173839.2 |
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| 3UTR-3UTR CAA 90 bp | ACACAGTTGACACTTTCTCTTCTGCACCGAGATGTAGGGCTTCAGCTGGTGATGGGCCCCTCACTGACCTaGGCAAGTGCTCCTCTGACG | + |
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Preference number: 3 (lower is better) Translates to: TQLTLSLLHRDVGLQLVMGPSLT*ASAPLT Trigger: CGTCAGAGGAGCACTTGCCAAGGTCAGTGAGGGGCC...CATCACCAGCTGAAGCCCTACATCTCGGTGCAGAAGAGAAAGTGTCAACTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173839.2 |
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| 3UTR GCA 72 bp | TGGTACTGTTCCGACTTGGTCCAGATCAGAATGTGGTaGCTACGCCCATATCTCGAGGGTTGCTCCCCTCTT | + |
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Preference number: 3 (lower is better) Translates to: WYCSDLVQIRMW*LRPYLEGCSPL Trigger: AAGAGGGGAGCAACCCTCGAGATATGGGCGTAGGCACCACATTCTGATCTGGACCAAGTCGGAACAGTACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173041.8 ENSMUST00000173595.2 ENSMUST00000173839.2 |
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| 3UTR CCA 72 bp | AGATGGTACTGTTCCGACTTGGTCCAGATCAGAATGTaGTGCCTACGCCCATATCTCGAGGGTTGCTCCCCT | + |
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Preference number: 3 (lower is better) Translates to: RWYCSDLVQIRM*CLRPYLEGCSP Trigger: AGGGGAGCAACCCTCGAGATATGGGCGTAGGCACCACATTCTGATCTGGACCAAGTCGGAACAGTACCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173041.8 ENSMUST00000173595.2 ENSMUST00000173839.2 |
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| 3UTR TCA 72 bp | GGGCTGTTCGATCTTCATGGTAGGATCTTGTGCGGCTaGGATGGTACTGTTCCGACTTGGTCCAGATCAGAA | + |
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Preference number: 3 (lower is better) Translates to: GLFDLHGRILCG*DGTVPTWSRSE Trigger: TTCTGATCTGGACCAAGTCGGAACAGTACCATCTCAGCCGCACAAGATCCTACCATGAAGATCGAACAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173595.2 ENSMUST00000173839.2 |
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| 3UTR GCA 72 bp | GTAGGGCTTCAGCTGGTGATGTCAGAATGTCCATTCTaGTGGTTGATGGGCTGTTCGATCTTCATGGTAGGA | + |
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Preference number: 3 (lower is better) Translates to: VGLQLVMSECPF*WLMGCSIFMVG Trigger: TCCTACCATGAAGATCGAACAGCCCATCAACCAGCAGAATGGACATTCTGACATCACCAGCTGAAGCCCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173595.2 ENSMUST00000173839.2 |
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| 3UTR CCA 72 bp | GGGCTTCAGCTGGTGATGTCAGAATGTCCATTCTGCTaGTTGATGGGCTGTTCGATCTTCATGGTAGGATCT | + |
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Preference number: 3 (lower is better) Translates to: GLQLVMSECPFC*LMGCSIFMVGS Trigger: AGATCCTACCATGAAGATCGAACAGCCCATCAACCAGCAGAATGGACATTCTGACATCACCAGCTGAAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173595.2 ENSMUST00000173839.2 |
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| 3UTR-3UTR CAA 90 bp | ACGTGTTTTGGTAAAGGTGGGATTCAATTACTGGTTGAATATATCCAAATCAAGGGCCCCTCACTGACCTaGGCAAGTGCTCCTCTGACG | + |
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Preference number: 3 (lower is better) Translates to: TCFGKGGIQLLVEYIQIKGPSLT*ASAPLT Trigger: CGTCAGAGGAGCACTTGCCAAGGTCAGTGAGGGGCC...CTTGATTTGGATATATTCAACCAGTAATTGAATCCCACCTTTACCAAAACACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173839.2 |
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| 3UTR GCA 72 bp | ACAATTAGCGACTACCACAATATTGACCACAACTGCTaGGTGAGACCAGGGATAAGCAAGATCAGTGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: TISDYHNIDHNC*VRPGISKISEG Trigger: CCCTTCACTGATCTTGCTTATCCCTGGTCTCACGCAGCAGTTGTGGTCAATATTGTGGTAGTCGCTAATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173839.2 |
||
| 3UTR GCA 72 bp | AGTACAATTAGCGACTACCACAATATTGACCACAACTaGTGCGTGAGACCAGGGATAAGCAAGATCAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: STISDYHNIDHN*CVRPGISKISE Trigger: TTCACTGATCTTGCTTATCCCTGGTCTCACGCAGCAGTTGTGGTCAATATTGTGGTAGTCGCTAATTGTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173839.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTGGGGGCCTACCGGCCCCTCACTGACCTTGGCAAGTGCTCCTCTGACGAGTGGGCGCGGGCGCACTaGGGACAGGGTCTGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLGAYRPLTDLGKCSSDEWARAH*GQGLQQ Trigger: CTGCTGCAGACCCTGTCCCCAGTGCGCCCGCGCCCA...CTCGTCAGAGGAGCACTTGCCAAGGTCAGTGAGGGGCCGGTAGGCCCCCAGAAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173041.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCCTACCGGCCCCTCACTGACCTTGGCAAGTGCTCCTCTGACGAGGGAACAGTCTTTGTTCCCGGCTaGGCGCGGGCGCACTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GAYRPLTDLGKCSSDEGTVFVPG*ARAHWG Trigger: TCCCCAGTGCGCCCGCGCCCAGCCGGGAACAAAGAC...TGTTCCCTCGTCAGAGGAGCACTTGCCAAGGTCAGTGAGGGGCCGGTAGGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173041.8 |
||
| CDS-3UTR GCA 90 bp | CACTGGCTCCCATGCTGGTCGAGAAGCACAGGAGCACCTGATGACACGGCCGCCGTCCGGGACACCGTGTaGGCCAGCTTCTGCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HWLPCWSRSTGAPDDTAAVRDTV*ASFCRE Trigger: CTCCCTGCAGAAGCTGGCGCACACGGTGTCCCGGAC...GGCGGCCGTGTCATCAGGTGCTCCTGTGCTTCTCGACCAGCATGGGAGCCAGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173839.2 |
||
| CDS-3UTR CCA 90 bp | CCCGCCGGTAGTGGGACAGGGGCAAAGGGGCTGGGAAGGGAACTGATATCTTCAACGGCCGCCCAGGGCTaGGAGCTGGGGCCTCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PAGSGTGAKGLGRELISSTAAQG*ELGPQL Trigger: CAACTGAGGCCCCAGCTCCCAGCCCTGGGCGGCCGT...TGAAGATATCAGTTCCCTTCCCAGCCCCTTTGCCCCTGTCCCACTACCGGCGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173595.2 |
||
| CDS-3UTR GCA 90 bp | CCACCCGCCGGTAGTGGGACAGGGGCAAAGGGGCTGGGAAGGGAACTGATATCTGTCCGGGACACCGTGTaGGCCAGCTTCTGCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPAGSGTGAKGLGRELISVRDTV*ASFCRE Trigger: CTCCCTGCAGAAGCTGGCGCACACGGTGTCCCGGAC...AGATATCAGTTCCCTTCCCAGCCCCTTTGCCCCTGTCCCACTACCGGCGGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173595.2 ENSMUST00000173839.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTGGGGGCCTACCGGCCCCTCACTGACCTTGGCAAGTGCTCCTCTGACGAGGTCCGGGACACCGTGTaGGCCAGCTTCTGCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLGAYRPLTDLGKCSSDEVRDTV*ASFCRE Trigger: CTCCCTGCAGAAGCTGGCGCACACGGTGTCCCGGAC...CTCGTCAGAGGAGCACTTGCCAAGGTCAGTGAGGGGCCGGTAGGCCCCCAGAAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173839.2 |
||
| CDS-3UTR CCA 90 bp | GTCAGGGCAGCTGGAGCTTTTCCAACTGTGCTGAGAGCTGCATGGCTGCAAGCTTGGGCGCGGGCGCACTaGGGACAGGGTCTGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VRAAGAFPTVLRAAWLQAWARAH*GQGLQQ Trigger: CTGCTGCAGACCCTGTCCCCAGTGCGCCCGCGCCCA...AGCTTGCAGCCATGCAGCTCTCAGCACAGTTGGAAAAGCTCCAGCTGCCCTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173793.8 |
||
| CDS-3UTR GCA 90 bp | CTCCCACCCGCCGGTAGTGGGACAGGGGCAAAGGGGCTGGGAAGGGAACTGATAGTGTGCGCCAGCTTCTaGAGGGAGTACCTGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: LPPAGSGTGAKGLGRELIVCASF*REYLNT Trigger: GGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACAC...TATCAGTTCCCTTCCCAGCCCCTTTGCCCCTGTCCCACTACCGGCGGGTGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173839.2 |
||
| CDS-3UTR GCA 90 bp | GCTGAGATGGTACTGTTCCGACTTGGTCCAGATCAGAATGTGGTGCCTACGCCCCAGTTGGGGGCTCGCTaGCTGCGCTCCCCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: AEMVLFRLGPDQNVVPTPQLGAR*LRSPST Trigger: GGTGCTGGGGGAGCGCAGGCAGCGAGCCCCCAACTG...GGGCGTAGGCACCACATTCTGATCTGGACCAAGTCGGAACAGTACCATCTCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173595.2 ENSMUST00000173839.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGGGCCTACCGGCCCCTCACTGACCTTGGCAAGTGCTCCTCTGACGAGGGACATTCCAGGAACACCTaGAGCAGCACGCGGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LGAYRPLTDLGKCSSDEGHSRNT*SSTRKM Trigger: CATCTTCCGCGTGCTGCTGCAGGTGTTCCTGGAATG...TCCCTCGTCAGAGGAGCACTTGCCAAGGTCAGTGAGGGGCCGGTAGGCCCCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109526.2 ENSMUST00000173839.2 |
||
| CDS-3UTR CCA 90 bp | GTCAGGGCAGCTGGAGCTTTTCCAACTGTGCTGAGAGCTGCATGGCTGCAAGCTGTCTTTGTTCCCGGCTaGGCGCGGGCGCACTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VRAAGAFPTVLRAAWLQAVFVPG*ARAHWG Trigger: TCCCCAGTGCGCCCGCGCCCAGCCGGGAACAAAGAC...AGCTTGCAGCCATGCAGCTCTCAGCACAGTTGGAAAAGCTCCAGCTGCCCTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173793.8 |
||
| CDS-3UTR GCA 90 bp | CCTACCGGCCCCTCACTGACCTTGGCAAGTGCTCCTCTGACGAGGGAACACAGGGATGATGAGCAGTTCTaGCGAGGCTGCTGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PTGPSLTLASAPLTREHRDDEQF*RGCCHC Trigger: GCAGTGGCAGCAGCCTCGGCAGAACTGCTCATCATC...CCTGTGTTCCCTCGTCAGAGGAGCACTTGCCAAGGTCAGTGAGGGGCCGGTAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173041.8 ENSMUST00000173839.2 |
||
| CDS-3UTR GCA 90 bp | CACTGGCTCCCATGCTGGTCGAGAAGCACAGGAGCACCTGATGACACGGCCGCCCATTCCAGGAACACCTaGAGCAGCACGCGGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: HWLPCWSRSTGAPDDTAAHSRNT*SSTRKM Trigger: CATCTTCCGCGTGCTGCTGCAGGTGTTCCTGGAATG...GGCGGCCGTGTCATCAGGTGCTCCTGTGCTTCTCGACCAGCATGGGAGCCAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109526.2 ENSMUST00000173839.2 |
||
| CDS-3UTR CCA 90 bp | CCACCCGCCGGTAGTGGGACAGGGGCAAAGGGGCTGGGAAGGGAACTGATATCTCACTGGCTCCCATGCTaGTCGAGAAGCACAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPAGSGTGAKGLGRELISHWLPC*SRSTGA Trigger: TGCTCCTGTGCTTCTCGACCAGCATGGGAGCCAGTG...AGATATCAGTTCCCTTCCCAGCCCCTTTGCCCCTGTCCCACTACCGGCGGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173595.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCACCCGCCGGTAGTGGGACAGGGGCAAAGGGGCTGGGAAGGGAACTGATACCTCACTTCTCGCAATaGGCTGTGTCCCTGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPPAGSGTGAKGLGRELIPHFSQ*AVSLED Trigger: ATCCTCCAGGGACACAGCCCATTGCGAGAAGTGAGG...TATCAGTTCCCTTCCCAGCCCCTTTGCCCCTGTCCCACTACCGGCGGGTGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109526.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGAACTGATATCTTCATCATTGTCGGTGCTGCTTTTCTGGGGGCCTACCGGCAGTTGGGGGCTCGCTaGCTGCGCTCCCCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: KGTDIFIIVGAAFLGAYRQLGAR*LRSPST Trigger: GGTGCTGGGGGAGCGCAGGCAGCGAGCCCCCAACTG...CCGGTAGGCCCCCAGAAAAGCAGCACCGACAATGATGAAGATATCAGTTCCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173595.2 ENSMUST00000173839.2 |
||
| CDS-3UTR GCA 90 bp | CCACCCGCCGGTAGTGGGACAGGGGCAAAGGGGCTGGGAAGGGAACTGATATCTGTGTGCGCCAGCTTCTaGAGGGAGTACCTGAACACT | + |
|
Preference number: 4 (lower is better) Translates to: PPAGSGTGAKGLGRELISVCASF*REYLNT Trigger: AGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACAC...AGATATCAGTTCCCTTCCCAGCCCCTTTGCCCCTGTCCCACTACCGGCGGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173595.2 |
||
| CDS-3UTR GCA 90 bp | GGGGCTGGGAAGGGAACTGATATCTTCATCATTGTCGGTGCTGCTTTTCTGGGGGTCCGGGACACCGTGTaGGCCAGCTTCTGCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GAGKGTDIFIIVGAAFLGVRDTV*ASFCRE Trigger: CTCCCTGCAGAAGCTGGCGCACACGGTGTCCCGGAC...CCCCAGAAAAGCAGCACCGACAATGATGAAGATATCAGTTCCCTTCCCAGCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173595.2 ENSMUST00000173839.2 |
||
| CDS-3UTR GCA 90 bp | AGATGGTACTGTTCCGACTTGGTCCAGATCAGAATGTGGTGCCTACGCCCATATCAGTTGGGGGCTCGCTaGCTGCGCTCCCCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RWYCSDLVQIRMWCLRPYQLGAR*LRSPST Trigger: GGTGCTGGGGGAGCGCAGGCAGCGAGCCCCCAACTG...ATATGGGCGTAGGCACCACATTCTGATCTGGACCAAGTCGGAACAGTACCATCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173595.2 ENSMUST00000173839.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGAACTGATATCTTCATCATTGTCGGTGCTGCTTTTCTGGGGGCCTACCGGAGCTGGGGCCTCAGTTaGGGGCTCGCTGCCTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KGTDIFIIVGAAFLGAYRSWGLS*GLAACA Trigger: AGCGCAGGCAGCGAGCCCCCAACTGAGGCCCCAGCT...CCGGTAGGCCCCCAGAAAAGCAGCACCGACAATGATGAAGATATCAGTTCCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000173595.2 |
||
| CDS-3UTR GCA 90 bp | GTCAGGGCAGCTGGAGCTTTTCCAACTGTGCTGAGAGCTGCATGGCTGCAAGCTGATGATGAGCAGTTCTaGCGAGGCTGCTGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VRAAGAFPTVLRAAWLQADDEQF*RGCCHC Trigger: GCAGTGGCAGCAGCCTCGGCAGAACTGCTCATCATC...AGCTTGCAGCCATGCAGCTCTCAGCACAGTTGGAAAAGCTCCAGCTGCCCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173793.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCCTACCGGCCCCTCACTGACCTTGGCAAGTGCTCCTCTGACGAGGGAACAAATGGGCTGTGTCCCTaGAGGATTTCGAAAAGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: GAYRPLTDLGKCSSDEGTNGLCP*RISKSE Trigger: TTCGCTTTTCGAAATCCTCCAGGGACACAGCCCATT...TGTTCCCTCGTCAGAGGAGCACTTGCCAAGGTCAGTGAGGGGCCGGTAGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109526.2 ENSMUST00000173041.8 |
||
| CDS-3UTR CCA 90 bp | CTCCCACCCGCCGGTAGTGGGACAGGGGCAAAGGGGCTGGGAAGGGAACTGATAAATGGGCTGTGTCCCTaGAGGATTTCGAAAAGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPPAGSGTGAKGLGRELINGLCP*RISKSE Trigger: TTCGCTTTTCGAAATCCTCCAGGGACACAGCCCATT...TATCAGTTCCCTTCCCAGCCCCTTTGCCCCTGTCCCACTACCGGCGGGTGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000109526.2 ENSMUST00000173041.8 ENSMUST00000173595.2 |
||
| CDS-3UTR TCA 90 bp | CTGAGATGGTACTGTTCCGACTTGGTCCAGATCAGAATGTGGTGCCTACGCCCATGGCAAGTGCTCCTCTaGCGAGGGAACACAGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LRWYCSDLVQIRMWCLRPWQVLL*RGNTGD Trigger: GTCCCCTGTGTTCCCTCGTCAGAGGAGCACTTGCCA...TGGGCGTAGGCACCACATTCTGATCTGGACCAAGTCGGAACAGTACCATCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173595.2 |
||
| CDS-3UTR CCA 90 bp | GGGGCTGGGAAGGGAACTGATATCTTCATCATTGTCGGTGCTGCTTTTCTGGGGATTCCTGCGCGGCACTaGCTCCCATGCTGGTCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GAGKGTDIFIIVGAAFLGIPARH*LPCWSR Trigger: TCTCGACCAGCATGGGAGCCAGTGCCGCGCAGGAAT...CCCCAGAAAAGCAGCACCGACAATGATGAAGATATCAGTTCCCTTCCCAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173595.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGATGGTACTGTTCCGACTTGGTCCAGATCAGAATGTGGTGCCTACGCCCAGTGTGCGCCAGCTTCTaGAGGGAGTACCTGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: LRWYCSDLVQIRMWCLRPVCASF*REYLNT Trigger: GGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACAC...TGGGCGTAGGCACCACATTCTGATCTGGACCAAGTCGGAACAGTACCATCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173839.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGAACTGATATCTTCATCATTGTCGGTGCTGCTTTTCTGGGGGCCTACCGGCGGCACTGGCTCCCATaGTGGTCGAGAAGCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KGTDIFIIVGAAFLGAYRRHWLP*WSRSTG Trigger: TCCTGTGCTTCTCGACCAGCATGGGAGCCAGTGCCG...CCGGTAGGCCCCCAGAAAAGCAGCACCGACAATGATGAAGATATCAGTTCCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173595.2 |
||
| CDS-3UTR TCA 90 bp | GTAGGATCTTGTGCGGCTGAGATGGTACTGTTCCGACTTGGTCCAGATCAGAATTCTGCAGGGAGTACCTaGACACCTGCAGCAGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: VGSCAAEMVLFRLGPDQNSAGST*TPAAAR Trigger: GCGTGCTGCTGCAGGTGTTCAGGTACTCCCTGCAGA...ATTCTGATCTGGACCAAGTCGGAACAGTACCATCTCAGCCGCACAAGATCCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153739.9 |
||
| CDS-3UTR GCA 90 bp | GCTGAGATGGTACTGTTCCGACTTGGTCCAGATCAGAATGTGGTGCCTACGCCCACTGACCTTGGCAAGTaGTCCTCTGACGAGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: AEMVLFRLGPDQNVVPTPTDLGK*SSDEGT Trigger: TGTTCCCTCGTCAGAGGAGCACTTGCCAAGGTCAGT...GGGCGTAGGCACCACATTCTGATCTGGACCAAGTCGGAACAGTACCATCTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173595.2 |
||
| CDS-3UTR GCA 90 bp | ACACAGTTGACACTTTCTCTTCTGCACCGAGATGTAGGGCTTCAGCTGGTGATGGATGATGAGCAGTTCTaGCGAGGCTGCTGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: TQLTLSLLHRDVGLQLVMDDEQF*RGCCHC Trigger: GCAGTGGCAGCAGCCTCGGCAGAACTGCTCATCATC...CATCACCAGCTGAAGCCCTACATCTCGGTGCAGAAGAGAAAGTGTCAACTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173595.2 ENSMUST00000173839.2 |
||
| CDS-3UTR GCA 90 bp | CAGCTGGTGATGTCAGAATGTCCATTCTGCTGGTTGATGGGCTGTTCGATCTTCGATGATGAGCAGTTCTaGCGAGGCTGCTGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: QLVMSECPFCWLMGCSIFDDEQF*RGCCHC Trigger: GCAGTGGCAGCAGCCTCGGCAGAACTGCTCATCATC...GAAGATCGAACAGCCCATCAACCAGCAGAATGGACATTCTGACATCACCAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173595.2 ENSMUST00000173839.2 |
||
| CDS-3UTR CCA 90 bp | GTCAGGGCAGCTGGAGCTTTTCCAACTGTGCTGAGAGCTGCATGGCTGCAAGCTAATGGGCTGTGTCCCTaGAGGATTTCGAAAAGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: VRAAGAFPTVLRAAWLQANGLCP*RISKSE Trigger: TTCGCTTTTCGAAATCCTCCAGGGACACAGCCCATT...AGCTTGCAGCCATGCAGCTCTCAGCACAGTTGGAAAAGCTCCAGCTGCCCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173793.8 |
||
| CDS-3UTR TCA 90 bp | GTTGACACTTTCTCTTCTGCACCGAGATGTAGGGCTTCAGCTGGTGATGTCAGATCTGCAGGGAGTACCTaGACACTTCTCGCAATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VDTFSSAPRCRASAGDVRSAGST*TLLAMG Trigger: GCCCATTGCGAGAAGTGTTCAGGTACTCCCTGCAGA...TCTGACATCACCAGCTGAAGCCCTACATCTCGGTGCAGAAGAGAAAGTGTCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173595.2 |
||
| CDS-3UTR GCA 90 bp | AGATGGTACTGTTCCGACTTGGTCCAGATCAGAATGTGGTGCCTACGCCCATATCATTCCAGGAACACCTaGAGCAGCACGCGGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: RWYCSDLVQIRMWCLRPYHSRNT*SSTRKM Trigger: CATCTTCCGCGTGCTGCTGCAGGTGTTCCTGGAATG...ATATGGGCGTAGGCACCACATTCTGATCTGGACCAAGTCGGAACAGTACCATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109526.2 ENSMUST00000173595.2 ENSMUST00000173839.2 |
||
| CDS-3UTR GCA 90 bp | AGATGGTACTGTTCCGACTTGGTCCAGATCAGAATGTGGTGCCTACGCCCATATGAGTACCTGAACACCTaGAGCAGCACGCGGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: RWYCSDLVQIRMWCLRPYEYLNT*SSTRKM Trigger: CATCTTCCGCGTGCTGCTGCAGGTGTTCAGGTACTC...ATATGGGCGTAGGCACCACATTCTGATCTGGACCAAGTCGGAACAGTACCATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153739.9 |
||
| CDS-3UTR GCA 90 bp | GAATGTCCATTCTGCTGGTTGATGGGCTGTTCGATCTTCATGGTAGGATCTTGTGATGATGAGCAGTTCTaGCGAGGCTGCTGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ECPFCWLMGCSIFMVGSCDDEQF*RGCCHC Trigger: GCAGTGGCAGCAGCCTCGGCAGAACTGCTCATCATC...ACAAGATCCTACCATGAAGATCGAACAGCCCATCAACCAGCAGAATGGACATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173595.2 ENSMUST00000173839.2 |
||
| CDS-3UTR GCA 90 bp | GAATGTCCATTCTGCTGGTTGATGGGCTGTTCGATCTTCATGGTAGGATCTTGTGTGTGCGCCAGCTTCTaGAGGGAGTACCTGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: ECPFCWLMGCSIFMVGSCVCASF*REYLNT Trigger: GGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACAC...ACAAGATCCTACCATGAAGATCGAACAGCCCATCAACCAGCAGAATGGACATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173839.2 |
||
| 3UTR CAA 72 bp | CTTCAGCTGGTGATGTCAGAATGTCCATTCTGCTGGTaGATGGGCTGTTCGATCTTCATGGTAGGATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LQLVMSECPFCW*MGCSIFMVGSC Trigger: ACAAGATCCTACCATGAAGATCGAACAGCCCATCAACCAGCAGAATGGACATTCTGACATCACCAGCTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173595.2 ENSMUST00000173839.2 |
||
| 3UTR CAA 72 bp | AAGATCAGTGAAGGGCCGGGGGTTAGAGAACGTGTTTaGGTAAAGGTGGGATTCAATTACTGGTTGAATATA | + |
|
Preference number: 4 (lower is better) Translates to: KISEGPGVRERV*VKVGFNYWLNI Trigger: TATATTCAACCAGTAATTGAATCCCACCTTTACCAAAACACGTTCTCTAACCCCCGGCCCTTCACTGATCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109526.2 ENSMUST00000153739.9 ENSMUST00000173839.2 |
||
| CDS-3UTR TCA 90 bp | ACGTGTTTTGGTAAAGGTGGGATTCAATTACTGGTTGAATATATCCAAATCAAGTCTGCAGGGAGTACCTaGACACCTCACTTCTCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TCFGKGGIQLLVEYIQIKSAGST*TPHFSQ Trigger: TTGCGAGAAGTGAGGTGTTCAGGTACTCCCTGCAGA...CTTGATTTGGATATATTCAACCAGTAATTGAATCCCACCTTTACCAAAACACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109526.2 |
||
| CDS TCA 90 bp | ACCGCGTTGGTCGCGATCGTCCGCAGCGGGCGACCGCCGCACCCCTaGGTCTTTGTTCCCGGCTGGGCGCGGGCGCACTGGGGACAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: TALVAIVRSGRPPHP*VFVPGWARAHWGQG Trigger: ACCCTGTCCCCAGTGCGCCCGCGCCCAGCCGGGAACAAAGACTCAGGGGTGCGGCGGTCGCCCGCTGCGGACGATCGCGACCAACGCGGT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088484.6 ENSMUST00000173041.8 ENSMUST00000173793.8 |
||
| CDS TCA 90 bp | GCCCGGTCCGGGACACCGTGTGCGCCAGCTTCTGCAGGGAGTACCTaGACACCGCGTTGGTCGCGATCGTCCGCAGCGGGCGACCGCCGC | + |
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Preference number: 5 (lower is better) Translates to: ARSGTPCAPASAGST*TPRWSRSSAAGDRR Trigger: GCGGCGGTCGCCCGCTGCGGACGATCGCGACCAACGCGGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACACGGTGTCCCGGACCGGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088484.6 |
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| CDS GCA 90 bp | TGCCTGCGCTCCCCCAGCACCTGCCGCCCGGTCCGGGACACCGTGTaGGCCAGCTTCTGCAGGGAGTACCTGAACACCGCGTTGGTCGCG | + |
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Preference number: 5 (lower is better) Translates to: CLRSPSTCRPVRDTV*ASFCREYLNTALVA Trigger: CGCGACCAACGCGGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACACGGTGTCCCGGACCGGGCGGCAGGTGCTGGGGGAGCGCAGGCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088484.6 |
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| CDS GCA 90 bp | CCCAGCACCTGCCGCCCGGTCCGGGACACCGTGTGCGCCAGCTTCTaGAGGGAGTACCTGAACACCGCGTTGGTCGCGATCGTCCGCAGC | + |
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Preference number: 5 (lower is better) Translates to: PSTCRPVRDTVCASF*REYLNTALVAIVRS Trigger: GCTGCGGACGATCGCGACCAACGCGGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACACGGTGTCCCGGACCGGGCGGCAGGTGCTGGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088484.6 |
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| CDS GCA 90 bp | TGCCTGCGCTCCCCCAGCACCTGCCGCCCGGTCCGGGACACCGTGTaGGCCAGCTTCTGCAGGGAGTACCTGAACACCTGCAGCAGCACG | + |
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Preference number: 5 (lower is better) Translates to: CLRSPSTCRPVRDTV*ASFCREYLNTCSST Trigger: CGTGCTGCTGCAGGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACACGGTGTCCCGGACCGGGCGGCAGGTGCTGGGGGAGCGCAGGCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153739.9 |
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| CDS GCA 90 bp | CCCAGCACCTGCCGCCCGGTCCGGGACACCGTGTGCGCCAGCTTCTaGAGGGAGTACCTGAACACCTGCGGTGAGAGACCCAGGACCCAC | + |
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Preference number: 5 (lower is better) Translates to: PSTCRPVRDTVCASF*REYLNTCGERPRTH Trigger: GTGGGTCCTGGGTCTCTCACCGCAGGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACACGGTGTCCCGGACCGGGCGGCAGGTGCTGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172487.2 |
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| CDS GCA 90 bp | TGCCTGCGCTCCCCCAGCACCTGCCGCCCGGTCCGGGACACCGTGTaGGCCAGCTTCTGCAGGGAGTACCTGAACACCTGCGGTGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: CLRSPSTCRPVRDTV*ASFCREYLNTCGER Trigger: TCTCTCACCGCAGGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACACGGTGTCCCGGACCGGGCGGCAGGTGCTGGGGGAGCGCAGGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172487.2 |
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| CDS TCA 90 bp | GCCCGGTCCGGGACACCGTGTGCGCCAGCTTCTGCAGGGAGTACCTaGACACCTGCGGTGAGAGACCCAGGACCCACCCTGCAGCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: ARSGTPCAPASAGST*TPAVRDPGPTLQQH Trigger: GTGCTGCTGCAGGGTGGGTCCTGGGTCTCTCACCGCAGGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACACGGTGTCCCGGACCGGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172487.2 |
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| CDS GCA 90 bp | TGCCTGCGCTCCCCCAGCACCTGCCGCCCGGTCCGGGACACCGTGTaGGCCAGCTTCTGCAGGGAGTACCTGAACACCTCACTTCTCGCA | + |
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Preference number: 5 (lower is better) Translates to: CLRSPSTCRPVRDTV*ASFCREYLNTSLLA Trigger: TGCGAGAAGTGAGGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACACGGTGTCCCGGACCGGGCGGCAGGTGCTGGGGGAGCGCAGGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109526.2 |
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| CDS GCA 90 bp | TGCCTGCGCTCCCCCAGCACCTGCCGCCCGGTCCGGGACACCGTGTaGGCCAGCTTCTGCAGGGAGTACCTGAACACTTCTCGCAATGGG | + |
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Preference number: 5 (lower is better) Translates to: CLRSPSTCRPVRDTV*ASFCREYLNTSRNG Trigger: CCCATTGCGAGAAGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACACGGTGTCCCGGACCGGGCGGCAGGTGCTGGGGGAGCGCAGGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173595.2 |
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| CDS GCA 90 bp | CGGGACACCGTGTGCGCCAGCTTCTGCAGGGAGTACCTGAACACCTaGGGTGAGAGACCCAGGACCCACCCTGCAGCAGCACGCGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: RDTVCASFCREYLNT*GERPRTHPAAARGR Trigger: TCTTCCGCGTGCTGCTGCAGGGTGGGTCCTGGGTCTCTCACCGCAGGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACACGGTGTCCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172487.2 |
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| CDS CCA 90 bp | CAGGGAGTACCTGAACACCTCACTTCTCGCAATGGGCTGTGTCCCTaGAGGATTTCGAAAAGCGAATCCTACCCAGTAAATGCAGCATTC | + |
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Preference number: 5 (lower is better) Translates to: QGVPEHLTSRNGLCP*RISKSESYPVNAAF Trigger: GAATGCTGCATTTACTGGGTAGGATTCGCTTTTCGAAATCCTCCAGGGACACAGCCCATTGCGAGAAGTGAGGTGTTCAGGTACTCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109526.2 |
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| CDS CCA 90 bp | TTCTGCAGGGAGTACCTGAACACTTCTCGCAATGGGCTGTGTCCCTaGAGGATTTCGAAAAGCGAATCCTACCCAGTAAATGCAGCATTC | + |
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Preference number: 5 (lower is better) Translates to: FCREYLNTSRNGLCP*RISKSESYPVNAAF Trigger: GAATGCTGCATTTACTGGGTAGGATTCGCTTTTCGAAATCCTCCAGGGACACAGCCCATTGCGAGAAGTGTTCAGGTACTCCCTGCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173595.2 |
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| CDS TCA 72 bp | GTCGCGATCGTCCGCAGCGGGCGACCGCCGCACCCCTaGGTCTTTGTTCCCGGCTGGGCGCGGGCGCACTGG | + |
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Preference number: 6 (lower is better) Translates to: VAIVRSGRPPHP*VFVPGWARAHW Trigger: CCAGTGCGCCCGCGCCCAGCCGGGAACAAAGACTCAGGGGTGCGGCGGTCGCCCGCTGCGGACGATCGCGAC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088484.6 ENSMUST00000173041.8 ENSMUST00000173793.8 |
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| CDS CAA 72 bp | TCGTCCGCAGCGGGCGACCGCCGCACCCCTGAGTCTTaGTTCCCGGCTGGGCGCGGGCGCACTGGGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: SSAAGDRRTPES*FPAGRGRTGDR Trigger: CCTGTCCCCAGTGCGCCCGCGCCCAGCCGGGAACAAAGACTCAGGGGTGCGGCGGTCGCCCGCTGCGGACGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088484.6 ENSMUST00000173041.8 ENSMUST00000173793.8 |
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| CDS CAA 90 bp | TGGTCGCGATCGTCCGCAGCGGGCGACCGCCGCACCCCTGAGTCTTaGTTCCCGGCTGGGCGCGGGCGCACTGGGGACAGGGTCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: WSRSSAAGDRRTPES*FPAGRGRTGDRVCS Trigger: GCTGCAGACCCTGTCCCCAGTGCGCCCGCGCCCAGCCGGGAACAAAGACTCAGGGGTGCGGCGGTCGCCCGCTGCGGACGATCGCGACCA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088484.6 ENSMUST00000173041.8 ENSMUST00000173793.8 |
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| CDS GCA 72 bp | TCCCCCAGCACCTGCCGCCCGGTCCGGGACACCGTGTaGGCCAGCTTCTGCAGGGAGTACCTGAACACCGCG | + |
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Preference number: 6 (lower is better) Translates to: SPSTCRPVRDTV*ASFCREYLNTA Trigger: CGCGGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACACGGTGTCCCGGACCGGGCGGCAGGTGCTGGGGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088484.6 |
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| CDS GCA 72 bp | TGCCGCCCGGTCCGGGACACCGTGTGCGCCAGCTTCTaGAGGGAGTACCTGAACACCTGCAGCAGCACGCGG | + |
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Preference number: 6 (lower is better) Translates to: CRPVRDTVCASF*REYLNTCSSTR Trigger: CCGCGTGCTGCTGCAGGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACACGGTGTCCCGGACCGGGCGGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153739.9 |
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| CDS GCA 72 bp | TCCCCCAGCACCTGCCGCCCGGTCCGGGACACCGTGTaGGCCAGCTTCTGCAGGGAGTACCTGAACACCTGC | + |
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Preference number: 6 (lower is better) Translates to: SPSTCRPVRDTV*ASFCREYLNTC Trigger: GCAGGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACACGGTGTCCCGGACCGGGCGGCAGGTGCTGGGGGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000153739.9 ENSMUST00000172487.2 |
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| CDS GCA 72 bp | TCCCCCAGCACCTGCCGCCCGGTCCGGGACACCGTGTaGGCCAGCTTCTGCAGGGAGTACCTGAACACCCAG | + |
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Preference number: 6 (lower is better) Translates to: SPSTCRPVRDTV*ASFCREYLNTQ Trigger: CTGGGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACACGGTGTCCCGGACCGGGCGGCAGGTGCTGGGGGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173839.2 |
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| CDS CAA 72 bp | TGCGCCAGCTTCTGCAGGGAGTACCTGAACACCGCGTaGGTCGCGATCGTCCGCAGCGGGCGACCGCCGCAC | + |
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Preference number: 6 (lower is better) Translates to: CASFCREYLNTA*VAIVRSGRPPH Trigger: GTGCGGCGGTCGCCCGCTGCGGACGATCGCGACCAACGCGGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088484.6 |
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| CDS TCA 72 bp | GGGACACCGTGTGCGCCAGCTTCTGCAGGGAGTACCTaGACACCGCGTTGGTCGCGATCGTCCGCAGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: GTPCAPASAGST*TPRWSRSSAAG Trigger: GCCCGCTGCGGACGATCGCGACCAACGCGGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACACGGTGTCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088484.6 |
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| CDS GCA 72 bp | TTCCCGGCTGGGCGCGGGCGCACTGGGGACAGGGTCTaGAGCAGCACGCGGAAGATGTACCAGCCGATGATG | + |
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Preference number: 6 (lower is better) Translates to: FPAGRGRTGDRV*SSTRKMYQPMM Trigger: CATCATCGGCTGGTACATCTTCCGCGTGCTGCTGCAGACCCTGTCCCCAGTGCGCCCGCGCCCAGCCGGGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088484.6 ENSMUST00000173041.8 ENSMUST00000173793.8 |
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| CDS GCA 72 bp | TGCCGCCCGGTCCGGGACACCGTGTGCGCCAGCTTCTaGAGGGAGTACCTGAACACCGCGTTGGTCGCGATC | + |
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Preference number: 6 (lower is better) Translates to: CRPVRDTVCASF*REYLNTALVAI Trigger: GATCGCGACCAACGCGGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACACGGTGTCCCGGACCGGGCGGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088484.6 |
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| CDS GCA 72 bp | TCCCCCAGCACCTGCCGCCCGGTCCGGGACACCGTGTaGGCCAGCTTCTGCAGGGAGTACCTGAACACCTCA | + |
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Preference number: 6 (lower is better) Translates to: SPSTCRPVRDTV*ASFCREYLNTS Trigger: TGAGGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACACGGTGTCCCGGACCGGGCGGCAGGTGCTGGGGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109526.2 |
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| CDS GCA 72 bp | TGCCGCCCGGTCCGGGACACCGTGTGCGCCAGCTTCTaGAGGGAGTACCTGAACACCTGCGGTGAGAGACCC | + |
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Preference number: 6 (lower is better) Translates to: CRPVRDTVCASF*REYLNTCGERP Trigger: GGGTCTCTCACCGCAGGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACACGGTGTCCCGGACCGGGCGGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172487.2 |
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| CDS TCA 72 bp | CGCCAGCTTCTGCAGGGAGTACCTGAACACCTGCGGTaGGAGACCCAGGACCCACCCTGCAGCAGCACGCGG | + |
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Preference number: 6 (lower is better) Translates to: RQLLQGVPEHLR*ETQDPPCSSTR Trigger: CCGCGTGCTGCTGCAGGGTGGGTCCTGGGTCTCTCACCGCAGGTGTTCAGGTACTCCCTGCAGAAGCTGGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172487.2 |
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| CDS GCA 72 bp | TCCCCCAGCACCTGCCGCCCGGTCCGGGACACCGTGTaGGCCAGCTTCTGCAGGGAGTACCTGAACACTTCT | + |
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Preference number: 6 (lower is better) Translates to: SPSTCRPVRDTV*ASFCREYLNTS Trigger: AGAAGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACACGGTGTCCCGGACCGGGCGGCAGGTGCTGGGGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173595.2 |
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| CDS TCA 72 bp | GGGACACCGTGTGCGCCAGCTTCTGCAGGGAGTACCTaGACACCTGCGGTGAGAGACCCAGGACCCACCCTG | + |
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Preference number: 6 (lower is better) Translates to: GTPCAPASAGST*TPAVRDPGPTL Trigger: CAGGGTGGGTCCTGGGTCTCTCACCGCAGGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACACGGTGTCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172487.2 |
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| CDS GCA 72 bp | TGCCGCCCGGTCCGGGACACCGTGTGCGCCAGCTTCTaGAGGGAGTACCTGAACACTTCTCGCAATGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: CRPVRDTVCASF*REYLNTSRNGL Trigger: CAGCCCATTGCGAGAAGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACACGGTGTCCCGGACCGGGCGGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173595.2 |
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| CDS GCA 72 bp | TGCCGCCCGGTCCGGGACACCGTGTGCGCCAGCTTCTaGAGGGAGTACCTGAACACCTCACTTCTCGCAATG | + |
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Preference number: 6 (lower is better) Translates to: CRPVRDTVCASF*REYLNTSLLAM Trigger: CATTGCGAGAAGTGAGGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACACGGTGTCCCGGACCGGGCGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109526.2 |
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| CDS CCA 72 bp | CCTGAACACCTCACTTCTCGCAATGGGCTGTGTCCCTaGAGGATTTCGAAAAGCGAATCCTACCCAGTAAAT | + |
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Preference number: 6 (lower is better) Translates to: PEHLTSRNGLCP*RISKSESYPVN Trigger: ATTTACTGGGTAGGATTCGCTTTTCGAAATCCTCCAGGGACACAGCCCATTGCGAGAAGTGAGGTGTTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109526.2 |
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| CDS CCA 72 bp | GAGTACCTGAACACTTCTCGCAATGGGCTGTGTCCCTaGAGGATTTCGAAAAGCGAATCCTACCCAGTAAAT | + |
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Preference number: 6 (lower is better) Translates to: EYLNTSRNGLCP*RISKSESYPVN Trigger: ATTTACTGGGTAGGATTCGCTTTTCGAAATCCTCCAGGGACACAGCCCATTGCGAGAAGTGTTCAGGTACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173595.2 |
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