Pregenerated sensors for NMUR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037393Ensembl transcript IDs: ENSMUST00000037682.3
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGTGCTTCCATATGGCATGGGTGGAGTGTCAGAAGCGGACTCCATaGAGCATTTGTACATCCACTGAGGGTGGGAAAGGGAAGGAGGGG | + |
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Preference number: 1 (lower is better) Translates to: ECFHMAWVECQKRTP*SICTSTEGGKGKEG Trigger: CCCCTCCTTCCCTTTCCCACCCTCAGTGGATGTACAAATGCTCCATGGAGTCCGCTTCTGACACTCCACCCATGCCATATGGAAGCACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR GCA 90 bp | GTGAGTTCCGGGTATGGAATTCAGATCCTGAGGCTCGGTGGCAAGTaGTTTTGTCTACTGTGTCATCCCTCCAGTCCTACACCACAGGGC | + |
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Preference number: 1 (lower is better) Translates to: VSSGYGIQILRLGGK*FCLLCHPSSPTPQG Trigger: GCCCTGTGGTGTAGGACTGGAGGGATGACACAGTAGACAAAAGCACTTGCCACCGAGCCTCAGGATCTGAATTCCATACCCGGAACTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR CCA 90 bp | CCACCACGTGAGTTCCGGGTATGGAATTCAGATCCTGAGGCTCGGTaGCAAGTGCTTTTGTCTACTGTGTCATCCCTCCAGTCCTACACC | + |
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Preference number: 1 (lower is better) Translates to: PPREFRVWNSDPEAR*QVLLSTVSSLQSYT Trigger: GGTGTAGGACTGGAGGGATGACACAGTAGACAAAAGCACTTGCCACCGAGCCTCAGGATCTGAATTCCATACCCGGAACTCACGTGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR TCA 90 bp | ACATGCAAGGAGGCAGAGGTGACAGAGTGCTCCTCCTTGCAGTGCTaGCATGTAGAGAAATGTCAATCACAGAAGCCAGGCCTTCCGAAG | + |
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Preference number: 1 (lower is better) Translates to: TCKEAEVTECSSLQC*HVEKCQSQKPGLPK Trigger: CTTCGGAAGGCCTGGCTTCTGTGATTGACATTTCTCTACATGTCAGCACTGCAAGGAGGAGCACTCTGTCACCTCTGCCTCCTTGCATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR CCA 90 bp | TTCAAGCACCAACATTGCCTTGAGAGTGCTTCCATATGGCATGGGTaGAGTGTCAGAAGCGGACTCCATGGAGCATTTGTACATCCACTG | + |
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Preference number: 1 (lower is better) Translates to: FKHQHCLESASIWHG*SVRSGLHGAFVHPL Trigger: CAGTGGATGTACAAATGCTCCATGGAGTCCGCTTCTGACACTCCACCCATGCCATATGGAAGCACTCTCAAGGCAATGTTGGTGCTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR TCA 90 bp | GGAAAGGGAAGGAGGGGCCTGGAAGGCTGCTCTGTCTGCGGATTTTaGTTTACTAGGCTTCTAGAAGATAGTGTAGTTGTTAGCTTCCAC | + |
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Preference number: 1 (lower is better) Translates to: GKGRRGLEGCSVCGF*FTRLLEDSVVVSFH Trigger: GTGGAAGCTAACAACTACACTATCTTCTAGAAGCCTAGTAAATCAAAATCCGCAGACAGAGCAGCCTTCCAGGCCCCTCCTTCCCTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR CCA 90 bp | GTCAAAACTTTCAAGCACCAACATTGCCTTGAGAGTGCTTCCATATaGCATGGGTGGAGTGTCAGAAGCGGACTCCATGGAGCATTTGTA | + |
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Preference number: 1 (lower is better) Translates to: VKTFKHQHCLESASI*HGWSVRSGLHGAFV Trigger: TACAAATGCTCCATGGAGTCCGCTTCTGACACTCCACCCATGCCATATGGAAGCACTCTCAAGGCAATGTTGGTGCTTGAAAGTTTTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR GCA 90 bp | GTCATCCCTCCAGTCCTACACCACAGGGCAAGAACAAAACAAATCTaGAGCCAAGTGGAGATGCATACAGAAAAGTCATCTGCTTTGACA | + |
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Preference number: 1 (lower is better) Translates to: VIPPVLHHRARTKQI*SQVEMHTEKSSALT Trigger: TGTCAAAGCAGATGACTTTTCTGTATGCATCTCCACTTGGCTGCAGATTTGTTTTGTTCTTGCCCTGTGGTGTAGGACTGGAGGGATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR CCA 90 bp | ACACAAGCCATGGTGACACAGAGGTCAGAGAACAACTTAAGGTGTTaGATCTCGTCCTCAATCAAGGAACTTGGATCAGCAGGCTTATGT | + |
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Preference number: 1 (lower is better) Translates to: TQAMVTQRSENNLRC*ISSSIKELGSAGLC Trigger: ACATAAGCCTGCTGATCCAAGTTCCTTGATTGAGGACGAGATCCAACACCTTAAGTTGTTCTCTGACCTCTGTGTCACCATGGCTTGTGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR TCA 90 bp | CAAGGAACTTGGATCAGCAGGCTTATGTGCAAATGTCTTTGCCCATaGGACATTAATTACTATTCTCTCCAGCTTTGCTTTCTCTTAGTC | + |
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Preference number: 1 (lower is better) Translates to: QGTWISRLMCKCLCP*DINYYSLQLCFLLV Trigger: GACTAAGAGAAAGCAAAGCTGGAGAGAATAGTAATTAATGTCTCATGGGCAAAGACATTTGCACATAAGCCTGCTGATCCAAGTTCCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR GCA 90 bp | AAACACAGACGTGAGAGGGAAAATAACACCCAGTCCATTGCTGTTTaGTGCATTAATGTTAATGGATGGCATCCAAAAATAATCTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: KHRRERENNTQSIAV*CINVNGWHPKIIFP Trigger: TGGAAAGATTATTTTTGGATGCCATCCATTAACATTAATGCAGCAAACAGCAATGGACTGGGTGTTATTTTCCCTCTCACGTCTGTGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR CCA 90 bp | AATAACACCCAGTCCATTGCTGTTTGCTGCATTAATGTTAATGGATaGCATCCAAAAATAATCTTTCCACTCCAGGTTAATTATAAATGC | + |
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Preference number: 1 (lower is better) Translates to: NNTQSIAVCCINVNG*HPKIIFPLQVNYKC Trigger: GCATTTATAATTAACCTGGAGTGGAAAGATTATTTTTGGATGCCATCCATTAACATTAATGCAGCAAACAGCAATGGACTGGGTGTTATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR-3UTR TCA 90 bp | CACCACGTGAGTTCCGGGTATGGAATTCAGATCCTGAGGCTCGGTGGCAAGTGCGCAAGGAGGCAGAGGTaGCAGAGTGCTCCTCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: HHVSSGYGIQILRLGGKCARRQR*QSAPPC Trigger: GCAAGGAGGAGCACTCTGTCACCTCTGCCTCCTTGC...GCACTTGCCACCGAGCCTCAGGATCTGAATTCCATACCCGGAACTCACGTGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR-3UTR CCA 90 bp | TTGGGGTGTGGTATGCCATGGTGCATGTTTGGTGGGGTCAAGGGACAACTTGAGGCAGTTCCTACCCAGTaGTCTCTCCTGCATCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LGCGMPWCMFGGVKGQLEAVPTQ*SLLHPG Trigger: CCCAGGATGCAGGAGAGACCACTGGGTAGGAACTGC...CTCAAGTTGTCCCTTGACCCCACCAAACATGCACCATGGCATACCACACCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR CAA 90 bp | TTCCGGGTATGGAATTCAGATCCTGAGGCTCGGTGGCAAGTGCTTTaGTCTACTGTGTCATCCCTCCAGTCCTACACCACAGGGCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: FRVWNSDPEARWQVL*STVSSLQSYTTGQE Trigger: TTCTTGCCCTGTGGTGTAGGACTGGAGGGATGACACAGTAGACAAAAGCACTTGCCACCGAGCCTCAGGATCTGAATTCCATACCCGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR-3UTR CCA 90 bp | TTTGACAACACATCCTTTGGGCTCTGCAAACACAGACGTGAGAGGGAAAATAACCTCTCAACCTGCTCATaGGCCAACTCTCCAGGGGAT | + |
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Preference number: 2 (lower is better) Translates to: FDNTSFGLCKHRRERENNLSTCS*ANSPGD Trigger: ATCCCCTGGAGAGTTGGCCCATGAGCAGGTTGAGAG...GTTATTTTCCCTCTCACGTCTGTGTTTGCAGAGCCCAAAGGATGTGTTGTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR-3UTR CCA 90 bp | CTATTCTCTCCAGCTTTGCTTTCTCTTAGTCCTGGACTTTGGACTTGTCCATCTGGGTGTGGTATGCCATaGTGCATGTTTGGTGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: LFSPALLSLSPGLWTCPSGCGMP*CMFGGV Trigger: GACCCCACCAAACATGCACCATGGCATACCACACCC...AGATGGACAAGTCCAAAGTCCAGGACTAAGAGAAAGCAAAGCTGGAGAGAATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR CAA 90 bp | TACACAAGCCATGGTGACACAGAGGTCAGAGAACAACTTAAGGTGTaGGATCTCGTCCTCAATCAAGGAACTTGGATCAGCAGGCTTATG | + |
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Preference number: 2 (lower is better) Translates to: YTSHGDTEVREQLKV*DLVLNQGTWISRLM Trigger: CATAAGCCTGCTGATCCAAGTTCCTTGATTGAGGACGAGATCCAACACCTTAAGTTGTTCTCTGACCTCTGTGTCACCATGGCTTGTGTA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGTCATCCCTCCAGTCCTACACCACAGGGCAAGAACAAAACAAATCTGCAGCTACAATGCAGAAAGATaGAGTGTAATGTCTGCGCTG | + |
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Preference number: 2 (lower is better) Translates to: CVIPPVLHHRARTKQICSYNAER*SVMSAL Trigger: CAGCGCAGACATTACACTCCATCTTTCTGCATTGTA...GCTGCAGATTTGTTTTGTTCTTGCCCTGTGGTGTAGGACTGGAGGGATGACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR-3UTR CCA 90 bp | CTATTCTCTCCAGCTTTGCTTTCTCTTAGTCCTGGACTTTGGACTTGTCCATCTCGTGAGTTCCGGGTATaGAATTCAGATCCTGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: LFSPALLSLSPGLWTCPSREFRV*NSDPEA Trigger: AGCCTCAGGATCTGAATTCCATACCCGGAACTCACG...AGATGGACAAGTCCAAAGTCCAGGACTAAGAGAAAGCAAAGCTGGAGAGAATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR-3UTR CCA 90 bp | TGCCATGGTGCATGTTTGGTGGGGTCAAGGGACAACTTGAGAAGTCAGTTCTCTAAATCTGCAGCCAAGTaGAGATGCATACAGAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: CHGACLVGSRDNLRSQFSKSAAK*RCIQKS Trigger: ACTTTTCTGTATGCATCTCCACTTGGCTGCAGATTT...AGAGAACTGACTTCTCAAGTTGTCCCTTGACCCCACCAAACATGCACCATGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR-3UTR TCA 90 bp | CCCATCATGAGAGCATCTTTAAGTGAGACTCCCATGGCACATTACAATCACAGTTCCTCCTTGCAGTGCTaGCATGTAGAGAAATGTCAA | + |
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Preference number: 2 (lower is better) Translates to: PIMRASLSETPMAHYNHSSSLQC*HVEKCQ Trigger: TTGACATTTCTCTACATGTCAGCACTGCAAGGAGGA...ACTGTGATTGTAATGTGCCATGGGAGTCTCACTTAAAGATGCTCTCATGATGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR-3UTR GCA 90 bp | CTATTCTCTCCAGCTTTGCTTTCTCTTAGTCCTGGACTTTGGACTTGTCCATCTACTTCTCTAATGACATaGAAGGAGGCAGAGGTGACA | + |
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Preference number: 2 (lower is better) Translates to: LFSPALLSLSPGLWTCPSTSLMT*KEAEVT Trigger: TGTCACCTCTGCCTCCTTGCATGTCATTAGAGAAGT...AGATGGACAAGTCCAAAGTCCAGGACTAAGAGAAAGCAAAGCTGGAGAGAATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGTCATCCCTCCAGTCCTACACCACAGGGCAAGAACAAAACAAATCTGCAGCAAAGTAAAGAGTAGGTaGAATCTAAGAGCCACATTA | + |
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Preference number: 2 (lower is better) Translates to: CVIPPVLHHRARTKQICSKVKSR*NLRATL Trigger: TAATGTGGCTCTTAGATTCCACCTACTCTTTACTTT...GCTGCAGATTTGTTTTGTTCTTGCCCTGTGGTGTAGGACTGGAGGGATGACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR-3UTR TCA 90 bp | GAGATGCATACAGAAAAGTCATCTGCTTTGACAACACATCCTTTGGGCTCTGCAAAGCCATTGCTTATTTaGCAACAAACTCCCAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: EMHTEKSSALTTHPLGSAKPLLI*QQTPKS Trigger: ACTTTTGGGAGTTTGTTGTCAAATAAGCAATGGCTT...TGCAGAGCCCAAAGGATGTGTTGTCAAAGCAGATGACTTTTCTGTATGCATCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR-3UTR GCA 90 bp | CTATTCTCTCCAGCTTTGCTTTCTCTTAGTCCTGGACTTTGGACTTGTCCATCTATAACTGTATTGTGCTaGTTAGCTACTCTACAACAC | + |
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Preference number: 2 (lower is better) Translates to: LFSPALLSLSPGLWTCPSITVLC*LATLQH Trigger: GTGTTGTAGAGTAGCTAAGCAGCACAATACAGTTAT...AGATGGACAAGTCCAAAGTCCAGGACTAAGAGAAAGCAAAGCTGGAGAGAATAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR-3UTR GCA 90 bp | CTATTCTCTCCAGCTTTGCTTTCTCTTAGTCCTGGACTTTGGACTTGTCCATCTTACAGAAAAGTCATCTaGTTTGACAACACATCCTTT | + |
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Preference number: 2 (lower is better) Translates to: LFSPALLSLSPGLWTCPSYRKVI*FDNTSF Trigger: AAAGGATGTGTTGTCAAAGCAGATGACTTTTCTGTA...AGATGGACAAGTCCAAAGTCCAGGACTAAGAGAAAGCAAAGCTGGAGAGAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR-3UTR CAA 90 bp | GCAAGTGCTTTTGTCTACTGTGTCATCCCTCCAGTCCTACACCACAGGGCAAGATGGAGGGTTAGGCTTTaGCGGGCAGTTCCTACCCAG | + |
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Preference number: 3 (lower is better) Translates to: ASAFVYCVIPPVLHHRARWRVRL*RAVPTQ Trigger: CTGGGTAGGAACTGCCCGCAAAAGCCTAACCCTCCA...TCTTGCCCTGTGGTGTAGGACTGGAGGGATGACACAGTAGACAAAAGCACTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR TCA 72 bp | GAGGCAGAGGTGACAGAGTGCTCCTCCTTGCAGTGCTaGCATGTAGAGAAATGTCAATCACAGAAGCCAGGC | + |
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Preference number: 3 (lower is better) Translates to: EAEVTECSSLQC*HVEKCQSQKPG Trigger: GCCTGGCTTCTGTGATTGACATTTCTCTACATGTCAGCACTGCAAGGAGGAGCACTCTGTCACCTCTGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR CCA 72 bp | GAGTTCCGGGTATGGAATTCAGATCCTGAGGCTCGGTaGCAAGTGCTTTTGTCTACTGTGTCATCCCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: EFRVWNSDPEAR*QVLLSTVSSLQ Trigger: CTGGAGGGATGACACAGTAGACAAAAGCACTTGCCACCGAGCCTCAGGATCTGAATTCCATACCCGGAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR GCA 72 bp | GGGTATGGAATTCAGATCCTGAGGCTCGGTGGCAAGTaGTTTTGTCTACTGTGTCATCCCTCCAGTCCTACA | + |
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Preference number: 3 (lower is better) Translates to: GYGIQILRLGGK*FCLLCHPSSPT Trigger: TGTAGGACTGGAGGGATGACACAGTAGACAAAAGCACTTGCCACCGAGCCTCAGGATCTGAATTCCATACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR CCA 72 bp | TTCAAGCACCAACATTGCCTTGAGAGTGCTTCCATATaGCATGGGTGGAGTGTCAGAAGCGGACTCCATGGA | + |
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Preference number: 3 (lower is better) Translates to: FKHQHCLESASI*HGWSVRSGLHG Trigger: TCCATGGAGTCCGCTTCTGACACTCCACCCATGCCATATGGAAGCACTCTCAAGGCAATGTTGGTGCTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR TCA 72 bp | GCCAAGTGGAGATGCATACAGAAAAGTCATCTGCTTTaGCAACACATCCTTTGGGCTCTGCAAACACAGACG | + |
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Preference number: 3 (lower is better) Translates to: AKWRCIQKSHLL*QHILWALQTQT Trigger: CGTCTGTGTTTGCAGAGCCCAAAGGATGTGTTGTCAAAGCAGATGACTTTTCTGTATGCATCTCCACTTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR TCA 72 bp | AGGAGGGGCCTGGAAGGCTGCTCTGTCTGCGGATTTTaGTTTACTAGGCTTCTAGAAGATAGTGTAGTTGTT | + |
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Preference number: 3 (lower is better) Translates to: RRGLEGCSVCGF*FTRLLEDSVVV Trigger: AACAACTACACTATCTTCTAGAAGCCTAGTAAATCAAAATCCGCAGACAGAGCAGCCTTCCAGGCCCCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR GCA 72 bp | CTGCAGCCAAGTGGAGATGCATACAGAAAAGTCATCTaGTTTGACAACACATCCTTTGGGCTCTGCAAACAC | + |
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Preference number: 3 (lower is better) Translates to: LQPSGDAYRKVI*FDNTSFGLCKH Trigger: GTGTTTGCAGAGCCCAAAGGATGTGTTGTCAAAGCAGATGACTTTTCTGTATGCATCTCCACTTGGCTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR-3UTR CAA 90 bp | CTATTCTCTCCAGCTTTGCTTTCTCTTAGTCCTGGACTTTGGACTTGTCCATCTTTGACAACACATCCTTaGGGCTCTGCAAACACAGAC | + |
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Preference number: 3 (lower is better) Translates to: LFSPALLSLSPGLWTCPSLTTHP*GSANTD Trigger: GTCTGTGTTTGCAGAGCCCAAAGGATGTGTTGTCAA...AGATGGACAAGTCCAAAGTCCAGGACTAAGAGAAAGCAAAGCTGGAGAGAATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR CCA 72 bp | ATGGTGACACAGAGGTCAGAGAACAACTTAAGGTGTTaGATCTCGTCCTCAATCAAGGAACTTGGATCAGCA | + |
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Preference number: 3 (lower is better) Translates to: MVTQRSENNLRC*ISSSIKELGSA Trigger: TGCTGATCCAAGTTCCTTGATTGAGGACGAGATCCAACACCTTAAGTTGTTCTCTGACCTCTGTGTCACCAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR TCA 72 bp | TGGATCAGCAGGCTTATGTGCAAATGTCTTTGCCCATaGGACATTAATTACTATTCTCTCCAGCTTTGCTTT | + |
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Preference number: 3 (lower is better) Translates to: WISRLMCKCLCP*DINYYSLQLCF Trigger: AAAGCAAAGCTGGAGAGAATAGTAATTAATGTCTCATGGGCAAAGACATTTGCACATAAGCCTGCTGATCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR GCA 72 bp | CGTGAGAGGGAAAATAACACCCAGTCCATTGCTGTTTaGTGCATTAATGTTAATGGATGGCATCCAAAAATA | + |
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Preference number: 3 (lower is better) Translates to: RERENNTQSIAV*CINVNGWHPKI Trigger: TATTTTTGGATGCCATCCATTAACATTAATGCAGCAAACAGCAATGGACTGGGTGTTATTTTCCCTCTCACG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR GCA 72 bp | ATATGTAAATTAGTCAAAACTTTCAAGCACCAACATTaGCTTGAGAGTGCTTCCATATGGCATGGGTGGAGT | + |
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Preference number: 3 (lower is better) Translates to: ICKLVKTFKHQH*LESASIWHGWS Trigger: ACTCCACCCATGCCATATGGAAGCACTCTCAAGGCAATGTTGGTGCTTGAAAGTTTTGACTAATTTACATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR GCA 72 bp | GAGAGGGAAAATAACACCCAGTCCATTGCTGTTTGCTaGATTAATGTTAATGGATGGCATCCAAAAATAATC | + |
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Preference number: 3 (lower is better) Translates to: ERENNTQSIAVC*INVNGWHPKII Trigger: GATTATTTTTGGATGCCATCCATTAACATTAATGCAGCAAACAGCAATGGACTGGGTGTTATTTTCCCTCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR CCA 72 bp | CAGTCCATTGCTGTTTGCTGCATTAATGTTAATGGATaGCATCCAAAAATAATCTTTCCACTCCAGGTTAAT | + |
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Preference number: 3 (lower is better) Translates to: QSIAVCCINVNG*HPKIIFPLQVN Trigger: ATTAACCTGGAGTGGAAAGATTATTTTTGGATGCCATCCATTAACATTAATGCAGCAAACAGCAATGGACTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS-3UTR GCA 90 bp | CTCCCACCACGTGAGTTCCGGGTATGGAATTCAGATCCTGAGGCTCGGTGGCAAGGCCCCTGTGGGCGATaGTGGGGATGGCACCATTTG | + |
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Preference number: 4 (lower is better) Translates to: LPPREFRVWNSDPEARWQGPCGR*WGWHHL Trigger: CAAATGGTGCCATCCCCAGCATCGCCCACAGGGGCC...TTGCCACCGAGCCTCAGGATCTGAATTCCATACCCGGAACTCACGTGGTGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS-3UTR TCA 90 bp | CTCCCACCACGTGAGTTCCGGGTATGGAATTCAGATCCTGAGGCTCGGTGGCAAGGTGTTGTGGATGGATaGCTGACAAGGGAACTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LPPREFRVWNSDPEARWQGVVDG*LTRELG Trigger: CCCCAGTTCCCTTGTCAGTCATCCATCCACAACACC...TTGCCACCGAGCCTCAGGATCTGAATTCCATACCCGGAACTCACGTGGTGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS-3UTR TCA 90 bp | GCAAGTGCTTTTGTCTACTGTGTCATCCCTCCAGTCCTACACCACAGGGCAAGATTGTGGATGGATGACTaGCAAGGGAACTGGGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: ASAFVYCVIPPVLHHRARLWMDD*QGNWGP Trigger: GGGCCCCCAGTTCCCTTGTCAGTCATCCATCCACAA...TCTTGCCCTGTGGTGTAGGACTGGAGGGATGACACAGTAGACAAAAGCACTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR CAA 72 bp | TGCCATGGTGCATGTTTGGTGGGGTCAAGGGACAACTaGAGAAGTCAGTTCTCTCTCCTCCCACCACGTGAG | + |
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Preference number: 4 (lower is better) Translates to: CHGACLVGSRDN*RSQFSLLPPRE Trigger: CTCACGTGGTGGGAGGAGAGAGAACTGACTTCTCAAGTTGTCCCTTGACCCCACCAAACATGCACCATGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS-3UTR TCA 90 bp | CTCCCACCACGTGAGTTCCGGGTATGGAATTCAGATCCTGAGGCTCGGTGGCAACAAACAGCATCTTGGTaGCTGATTTTCTGGAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LPPREFRVWNSDPEARWQQTASW*LIFWRV Trigger: GACCCTCCAGAAAATCAGTCACCAAGATGCTGTTTG...TTGCCACCGAGCCTCAGGATCTGAATTCCATACCCGGAACTCACGTGGTGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS-3UTR CCA 90 bp | CTCCCACCACGTGAGTTCCGGGTATGGAATTCAGATCCTGAGGCTCGGTGGCAAACACCTGATACCACGTaGATGAGGTTGAACACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPPREFRVWNSDPEARWQTPDTT*MRLNTA Trigger: TGCTGTGTTCAACCTCATCCACGTGGTATCAGGTGT...TTGCCACCGAGCCTCAGGATCTGAATTCCATACCCGGAACTCACGTGGTGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR CAA 72 bp | GGTGAGTGTTGGGGTGTGGTATGCCATGGTGCATGTTaGGTGGGGTCAAGGGACAACTTGAGAAGTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GECWGVVCHGAC*VGSRDNLRSQF Trigger: GAACTGACTTCTCAAGTTGTCCCTTGACCCCACCAAACATGCACCATGGCATACCACACCCCAACACTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS-3UTR GCA 90 bp | AATATGAACTTATTTATTGTGGTGAGTGTTGGGGTGTGGTATGCCATGGTGCATGGGCCCGTCGCCGTGTaGTCTCCAGCTTGGCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: NMNLFIVVSVGVWYAMVHGPVAV*SPAWLG Trigger: TCCGAGCCAAGCTGGAGAGCACACGGCGACGGGCCC...ATGCACCATGGCATACCACACCCCAACACTCACCACAATAAATAAGTTCATATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS-3UTR CCA 90 bp | TGTCATCCCTCCAGTCCTACACCACAGGGCAAGAACAAAACAAATCTGCAGCCAGGAACGGATGGACAATaGCCACGTAGCGCTCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: CHPSSPTPQGKNKTNLQPGTDGQ*PRSAQC Trigger: GCATTGAGCGCTACGTGGCCATTGTCCATCCGTTCC...TGGCTGCAGATTTGTTTTGTTCTTGCCCTGTGGTGTAGGACTGGAGGGATGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS-3UTR TCA 90 bp | CACCAACATTGCCTTGAGAGTGCTTCCATATGGCATGGGTGGAGTGTCAGAAGCACTCGTCCACAAAGCTaGAGAAGAGCCTGTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: HQHCLESASIWHGWSVRSTRPQS*RRACPH Trigger: ATGTGGACAGGCTCTTCTTCAGCTTTGTGGACGAGT...GCTTCTGACACTCCACCCATGCCATATGGAAGCACTCTCAAGGCAATGTTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS-3UTR GCA 90 bp | TGTGTCATCCCTCCAGTCCTACACCACAGGGCAAGAACAAAACAAATCTGCAGCGACCCGTTGGGAAACTaGTGGAACTTGATGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: CVIPPVLHHRARTKQICSDPLGN*WNLMPW Trigger: CCATGGCATCAAGTTCCAGCAGTTTCCCAACGGGTC...GCTGCAGATTTGTTTTGTTCTTGCCCTGTGGTGTAGGACTGGAGGGATGACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| 3UTR CAA 72 bp | ACTCCCAAAAGTCCTAACTTTTGGAGGGTTAGGCTTTaGCGGGCAGTTCCTACCCAGTGGTCTCTCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TPKSPNFWRVRL*RAVPTQWSLLH Trigger: ATGCAGGAGAGACCACTGGGTAGGAACTGCCCGCAAAAGCCTAACCCTCCAAAAGTTAGGACTTTTGGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS-3UTR GCA 90 bp | TTTGACAACACATCCTTTGGGCTCTGCAAACACAGACGTGAGAGGGAAAATAACGGCACACCAGAAGATTaGCTATCACCCCCACCACGA | + |
|
Preference number: 4 (lower is better) Translates to: FDNTSFGLCKHRRERENNGTPED*LSPPPR Trigger: TCGTGGTGGGGGTGATAGGCAATCTTCTGGTGTGCC...GTTATTTTCCCTCTCACGTCTGTGTTTGCAGAGCCCAAAGGATGTGTTGTCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS-3UTR CCA 90 bp | CCCATCATGAGAGCATCTTTAAGTGAGACTCCCATGGCACATTACAATCACAGTAAGAAGATAACCTTCTaGGCTGGAGGCCCCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PIMRASLSETPMAHYNHSKKITF*AGGPCG Trigger: CCCACAGGGGCCTCCAGCCCAGAAGGTTATCTTCTT...ACTGTGATTGTAATGTGCCATGGGAGTCTCACTTAAAGATGCTCTCATGATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS-3UTR CCA 90 bp | TGTCATCCCTCCAGTCCTACACCACAGGGCAAGAACAAAACAAATCTGCAGCCAGTTGGGTGTTGTGGATaGATGACTGACAAGGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: CHPSSPTPQGKNKTNLQPVGCCG*MTDKGT Trigger: AGTTCCCTTGTCAGTCATCCATCCACAACACCCAAC...TGGCTGCAGATTTGTTTTGTTCTTGCCCTGTGGTGTAGGACTGGAGGGATGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS-3UTR TCA 90 bp | AATATGAACTTATTTATTGTGGTGAGTGTTGGGGTGTGGTATGCCATGGTGCATCCCATATGGGTTTGGTaGCTGTGCAGGTGGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NMNLFIVVSVGVWYAMVHPIWVW*LCRWQS Trigger: GCTCTGCCACCTGCACAGTCACCAAACCCATATGGG...ATGCACCATGGCATACCACACCCCAACACTCACCACAATAAATAAGTTCATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS-3UTR CCA 90 bp | TTTGGGCTCTGCAAACACAGACGTGAGAGGGAAAATAACACCCAGTCCATTGCTCATGGATGCTGGTGTTaGGCAAAGAAAAGACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FGLCKHRRERENNTQSIAHGCWC*AKKRPQ Trigger: CTGTGGTCTTTTCTTTGCCCAACACCAGCATCCATG...AGCAATGGACTGGGTGTTATTTTCCCTCTCACGTCTGTGTTTGCAGAGCCCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS-3UTR TCA 90 bp | TGTGTCATCCCTCCAGTCCTACACCACAGGGCAAGAACAAAACAAATCTGCAGCATAGAAAAAGACACCTaGTACCACGTGGATGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CVIPPVLHHRARTKQICSIEKDT*YHVDEV Trigger: AACCTCATCCACGTGGTATCAGGTGTCTTTTTCTAT...GCTGCAGATTTGTTTTGTTCTTGCCCTGTGGTGTAGGACTGGAGGGATGACACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| 3UTR CAA 72 bp | CATGGTGACACAGAGGTCAGAGAACAACTTAAGGTGTaGGATCTCGTCCTCAATCAAGGAACTTGGATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HGDTEVREQLKV*DLVLNQGTWIS Trigger: GCTGATCCAAGTTCCTTGATTGAGGACGAGATCCAACACCTTAAGTTGTTCTCTGACCTCTGTGTCACCATG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS-3UTR TCA 90 bp | GGACTTGTCCATCTTTCTAACCCTCTCAGAGAATGTATTTCACTAGCAGGGAAAGAAACTGCTGGAACTTaGTGCCATGGATGCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLVHLSNPLRECISLAGKETAGT*CHGCWC Trigger: ACACCAGCATCCATGGCATCAAGTTCCAGCAGTTTC...TTTCCCTGCTAGTGAAATACATTCTCTGAGAGGGTTAGAAAGATGGACAAGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS-3UTR GCA 90 bp | AATATGAACTTATTTATTGTGGTGAGTGTTGGGGTGTGGTATGCCATGGTGCATGGGGATGGCACCATTTaGAGGAAGGAGAGACAACAT | + |
|
Preference number: 4 (lower is better) Translates to: NMNLFIVVSVGVWYAMVHGDGTI*RKERQH Trigger: ATGTTGTCTCTCCTTCCTGCAAATGGTGCCATCCCC...ATGCACCATGGCATACCACACCCCAACACTCACCACAATAAATAAGTTCATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS-3UTR TCA 90 bp | GGACTTGTCCATCTTTCTAACCCTCTCAGAGAATGTATTTCACTAGCAGGGAAATGTTCAAGTACTTCATaGGAGAATCGTGGATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLVHLSNPLRECISLAGKCSSTS*ENRGSR Trigger: CCTGGATCCACGATTCTCTCATGAAGTACTTGAACA...TTTCCCTGCTAGTGAAATACATTCTCTGAGAGGGTTAGAAAGATGGACAAGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS-3UTR CCA 90 bp | GAGATGCATACAGAAAAGTCATCTGCTTTGACAACACATCCTTTGGGCTCTGCAAGGAAGGAGGTAGCTTaGATGATGAAGTTATACACC | + |
|
Preference number: 4 (lower is better) Translates to: EMHTEKSSALTTHPLGSARKEVA*MMKLYT Trigger: GGTGTATAACTTCATCATCCAAGCTACCTCCTTCCT...TGCAGAGCCCAAAGGATGTGTTGTCAAAGCAGATGACTTTTCTGTATGCATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS-3UTR CCA 90 bp | GGACTTGTCCATCTTTCTAACCCTCTCAGAGAATGTATTTCACTAGCAGGGAAAGTCAGCTCCACAAGGTaGCATTCTGTCAAGAAGATA | + |
|
Preference number: 4 (lower is better) Translates to: GLVHLSNPLRECISLAGKVSSTR*HSVKKI Trigger: TATCTTCTTGACAGAATGCCACCTTGTGGAGCTGAC...TTTCCCTGCTAGTGAAATACATTCTCTGAGAGGGTTAGAAAGATGGACAAGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| 3UTR CAA 72 bp | CATACAGAAAAGTCATCTGCTTTGACAACACATCCTTaGGGCTCTGCAAACACAGACGTGAGAGGGAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: HTEKSSALTTHP*GSANTDVRGKI Trigger: TATTTTCCCTCTCACGTCTGTGTTTGCAGAGCCCAAAGGATGTGTTGTCAAAGCAGATGACTTTTCTGTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS-3UTR CCA 90 bp | CCCATCATGAGAGCATCTTTAAGTGAGACTCCCATGGCACATTACAATCACAGTAGAGATAGTAGTTGGTaGGTGTCTTCAAAGTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PIMRASLSETPMAHYNHSRDSSW*VSSKFD Trigger: ATCAAACTTTGAAGACACCCACCAACTACTATCTCT...ACTGTGATTGTAATGTGCCATGGGAGTCTCACTTAAAGATGCTCTCATGATGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS-3UTR GCA 90 bp | TTTAATATGAACTTATTTATTGTGGTGAGTGTTGGGGTGTGGTATGCCATGGTGCACAGTCACTTTGTCTaGCTCAAGAGATTCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FNMNLFIVVSVGVWYAMVHSHFV*LKRFIS Trigger: AGAGATGAATCTCTTGAGGCAGACAAAGTGACTGTG...CACCATGGCATACCACACCCCAACACTCACCACAATAAATAAGTTCATATTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS TCA 90 bp | TCAACACAGGGGACGGTGGTAAGTTGGGTGTTGTGGATGGATGACTaGCAAGGGAACTGGGGGCCCGCATCCTCTGTCAGCTCCACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: STQGTVVSWVLWMDD*QGNWGPASSVSSTR Trigger: CCTTGTGGAGCTGACAGAGGATGCGGGCCCCCAGTTCCCTTGTCAGTCATCCATCCACAACACCCAACTTACCACCGTCCCCTGTGTTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS TCA 90 bp | CTCTTCAACACAGGGGACGGTGGTAAGTTGGGTGTTGTGGATGGATaGCTGACAAGGGAACTGGGGGCCCGCATCCTCTGTCAGCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LFNTGDGGKLGVVDG*LTRELGARILCQLH Trigger: GTGGAGCTGACAGAGGATGCGGGCCCCCAGTTCCCTTGTCAGTCATCCATCCACAACACCCAACTTACCACCGTCCCCTGTGTTGAAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS GCA 90 bp | CGAAGATCAGCGCATAGACCACAGACACTGGAAGGGATAGGTCACTaGGCTTGGGTCCACACAGGTAGGCCAAGTACTCCTCTGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RRSAHRPQTLEGIGH*AWVHTGRPSTPLCC Trigger: ACAGCACAGAGGAGTACTTGGCCTACCTGTGTGGACCCAAGCGCAGTGACCTATCCCTTCCAGTGTCTGTGGTCTATGCGCTGATCTTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS GCA 90 bp | TCTGTCAAGAAGATAACCTTCTGGGCTGGAGGCCCCTGTGGGCGATaGTGGGGATGGCACCATTTGCAGGAAGGAGAGACAACATTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SVKKITFWAGGPCGR*WGWHHLQEGETTFR Trigger: TCGGAATGTTGTCTCTCCTTCCTGCAAATGGTGCCATCCCCAGCATCGCCCACAGGGGCCTCCAGCCCAGAAGGTTATCTTCTTGACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS CCA 90 bp | CCGGGCACAGAGGACCCGTTGGGAAACTGCTGGAACTTGATGCCATaGATGCTGGTGTTGGGCAAAGAAAAGACCACAGAGAAGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PGTEDPLGNCWNLMP*MLVLGKEKTTEKLQ Trigger: CTGGAGCTTCTCTGTGGTCTTTTCTTTGCCCAACACCAGCATCCATGGCATCAAGTTCCAGCAGTTTCCCAACGGGTCCTCTGTGCCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS CCA 90 bp | TCAGCGCATAGACCACAGACACTGGAAGGGATAGGTCACTGCGCTTaGGTCCACACAGGTAGGCCAAGTACTCCTCTGTGCTGTTCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SAHRPQTLEGIGHCA*VHTGRPSTPLCCSS Trigger: ACTTGAACAGCACAGAGGAGTACTTGGCCTACCTGTGTGGACCCAAGCGCAGTGACCTATCCCTTCCAGTGTCTGTGGTCTATGCGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS-3UTR CAA 90 bp | TGTCATCCCTCCAGTCCTACACCACAGGGCAAGAACAAAACAAATCTGCAGCCAGGCACAGAGGACCCGTaGGGAAACTGCTGGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: CHPSSPTPQGKNKTNLQPGTEDP*GNCWNL Trigger: CAAGTTCCAGCAGTTTCCCAACGGGTCCTCTGTGCC...TGGCTGCAGATTTGTTTTGTTCTTGCCCTGTGGTGTAGGACTGGAGGGATGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS-3UTR CAA 90 bp | GCAAGTGCTTTTGTCTACTGTGTCATCCCTCCAGTCCTACACCACAGGGCAAGATGGGGATGGCACCATTaGCAGGAAGGAGAGACAACA | + |
|
Preference number: 5 (lower is better) Translates to: ASAFVYCVIPPVLHHRARWGWHH*QEGETT Trigger: TGTTGTCTCTCCTTCCTGCAAATGGTGCCATCCCCA...TCTTGCCCTGTGGTGTAGGACTGGAGGGATGACACAGTAGACAAAAGCACTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS CCA 90 bp | GACTCAGTCCACTCGTCCACAAAGCTGAAGAAGAGCCTGTCCACATaGAAAGGGGTCCAACAGATAGCAAACACGAGGACCAAGACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: DSVHSSTKLKKSLST*KGVQQIANTRTKTN Trigger: GTTTGTCTTGGTCCTCGTGTTTGCTATCTGTTGGACCCCTTTCCATGTGGACAGGCTCTTCTTCAGCTTTGTGGACGAGTGGACTGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS-3UTR CAA 90 bp | GAGATGCATACAGAAAAGTCATCTGCTTTGACAACACATCCTTTGGGCTCTGCAACCACGTGGATGAGGTaGAACACAGCAGCCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: EMHTEKSSALTTHPLGSATTWMR*NTAARD Trigger: GTCCCTGGCTGCTGTGTTCAACCTCATCCACGTGGT...TGCAGAGCCCAAAGGATGTGTTGTCAAAGCAGATGACTTTTCTGTATGCATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS-3UTR CAA 90 bp | CTATTCTCTCCAGCTTTGCTTTCTCTTAGTCCTGGACTTTGGACTTGTCCATCTGGAAACTGCTGGAACTaGATGCCATGGATGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LFSPALLSLSPGLWTCPSGNCWN*MPWMLV Trigger: CACCAGCATCCATGGCATCAAGTTCCAGCAGTTTCC...AGATGGACAAGTCCAAAGTCCAGGACTAAGAGAAAGCAAAGCTGGAGAGAATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS-3UTR CAA 90 bp | TTGGGGTGTGGTATGCCATGGTGCATGTTTGGTGGGGTCAAGGGACAACTTGAGATATTCACAGTCACTTaGTCTGCCTCAAGAGATTCA | + |
|
Preference number: 5 (lower is better) Translates to: LGCGMPWCMFGGVKGQLEIFTVT*SASRDS Trigger: TGAATCTCTTGAGGCAGACAAAGTGACTGTGAATAT...CTCAAGTTGTCCCTTGACCCCACCAAACATGCACCATGGCATACCACACCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS-3UTR CAA 90 bp | TGTCATCCCTCCAGTCCTACACCACAGGGCAAGAACAAAACAAATCTGCAGCCAAAGACAAACAGCATCTaGGTGACTGATTTTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CHPSSPTPQGKNKTNLQPKTNSI*VTDFLE Trigger: CTCCAGAAAATCAGTCACCAAGATGCTGTTTGTCTT...TGGCTGCAGATTTGTTTTGTTCTTGCCCTGTGGTGTAGGACTGGAGGGATGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS-3UTR CAA 90 bp | TTTAATATGAACTTATTTATTGTGGTGAGTGTTGGGGTGTGGTATGCCATGGTGTACACCCATATGGGTTaGGTGACTGTGCAGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FNMNLFIVVSVGVWYAMVYTHMG*VTVQVA Trigger: TGCCACCTGCACAGTCACCAAACCCATATGGGTGTA...CACCATGGCATACCACACCCCAACACTCACCACAATAAATAAGTTCATATTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS-3UTR CAA 90 bp | CTATTCTCTCCAGCTTTGCTTTCTCTTAGTCCTGGACTTTGGACTTGTCCATCTGAGGAAGGAGGTAGCTaGGATGATGAAGTTATACAC | + |
|
Preference number: 5 (lower is better) Translates to: LFSPALLSLSPGLWTCPSEEGGS*DDEVIH Trigger: GTGTATAACTTCATCATCCAAGCTACCTCCTTCCTC...AGATGGACAAGTCCAAAGTCCAGGACTAAGAGAAAGCAAAGCTGGAGAGAATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS TCA 90 bp | ACCAAGACAAACAGCATCTTGGTGACTGATTTTCTGGAGGGTCTGTaGATATTCACAGTCACTTTGTCTGCCTCAAGAGATTCATCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TKTNSILVTDFLEGL*IFTVTLSASRDSSL Trigger: GAGAGATGAATCTCTTGAGGCAGACAAAGTGACTGTGAATATTCACAGACCCTCCAGAAAATCAGTCACCAAGATGCTGTTTGTCTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS-3UTR CAA 90 bp | TTTAATATGAACTTATTTATTGTGGTGAGTGTTGGGGTGTGGTATGCCATGGTGCCATGGATGCTGGTGTaGGGCAAAGAAAAGACCACA | + |
|
Preference number: 5 (lower is better) Translates to: FNMNLFIVVSVGVWYAMVPWMLV*GKEKTT Trigger: TGTGGTCTTTTCTTTGCCCAACACCAGCATCCATGG...CACCATGGCATACCACACCCCAACACTCACCACAATAAATAAGTTCATATTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS CAA 72 bp | GGAGGCCCCTGTGGGCGATGCTGGGGATGGCACCATTaGCAGGAAGGAGAGACAACATTCCGAAAGGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: GGPCGRCWGWHH*QEGETTFRKAA Trigger: GGCGGCCTTTCGGAATGTTGTCTCTCCTTCCTGCAAATGGTGCCATCCCCAGCATCGCCCACAGGGGCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS GCA 72 bp | GTGGCAGAGCCGGGCACAGAGGACCCGTTGGGAAACTaGTGGAACTTGATGCCATGGATGCTGGTGTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VAEPGTEDPLGN*WNLMPWMLVLG Trigger: GCCCAACACCAGCATCCATGGCATCAAGTTCCAGCAGTTTCCCAACGGGTCCTCTGTGCCCGGCTCTGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS TCA 72 bp | ACAGGGGACGGTGGTAAGTTGGGTGTTGTGGATGGATaGCTGACAAGGGAACTGGGGGCCCGCATCCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TGDGGKLGVVDG*LTRELGARILC Trigger: ACAGAGGATGCGGGCCCCCAGTTCCCTTGTCAGTCATCCATCCACAACACCCAACTTACCACCGTCCCCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS GCA 72 bp | AAGATAACCTTCTGGGCTGGAGGCCCCTGTGGGCGATaGTGGGGATGGCACCATTTGCAGGAAGGAGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: KITFWAGGPCGR*WGWHHLQEGET Trigger: TGTCTCTCCTTCCTGCAAATGGTGCCATCCCCAGCATCGCCCACAGGGGCCTCCAGCCCAGAAGGTTATCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS CCA 72 bp | GCAGAGCCGGGCACAGAGGACCCGTTGGGAAACTGCTaGAACTTGATGCCATGGATGCTGGTGTTGGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: AEPGTEDPLGNC*NLMPWMLVLGK Trigger: TTTGCCCAACACCAGCATCCATGGCATCAAGTTCCAGCAGTTTCCCAACGGGTCCTCTGTGCCCGGCTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS CCA 72 bp | TGTCAAGAAGATAACCTTCTGGGCTGGAGGCCCCTGTaGGCGATGCTGGGGATGGCACCATTTGCAGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: CQEDNLLGWRPL*AMLGMAPFAGR Trigger: CCTTCCTGCAAATGGTGCCATCCCCAGCATCGCCCACAGGGGCCTCCAGCCCAGAAGGTTATCTTCTTGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS TCA 72 bp | CAGCAGCCAGGGACTCAGTCCACTCGTCCACAAAGCTaGAGAAGAGCCTGTCCACATGGAAAGGGGTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: QQPGTQSTRPQS*RRACPHGKGSN Trigger: GTTGGACCCCTTTCCATGTGGACAGGCTCTTCTTCAGCTTTGTGGACGAGTGGACTGAGTCCCTGGCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS GCA 72 bp | GCGCATAGACCACAGACACTGGAAGGGATAGGTCACTaGGCTTGGGTCCACACAGGTAGGCCAAGTACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: AHRPQTLEGIGH*AWVHTGRPSTP Trigger: AGGAGTACTTGGCCTACCTGTGTGGACCCAAGCGCAGTGACCTATCCCTTCCAGTGTCTGTGGTCTATGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
||
| CDS CCA 72 bp | AGACCACAGACACTGGAAGGGATAGGTCACTGCGCTTaGGTCCACACAGGTAGGCCAAGTACTCCTCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: RPQTLEGIGHCA*VHTGRPSTPLC Trigger: GCACAGAGGAGTACTTGGCCTACCTGTGTGGACCCAAGCGCAGTGACCTATCCCTTCCAGTGTCTGTGGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS CCA 72 bp | AACTGGGGGCCCGCATCCTCTGTCAGCTCCACAAGGTaGCATTCTGTCAAGAAGATAACCTTCTGGGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: NWGPASSVSSTR*HSVKKITFWAG Trigger: TCCAGCCCAGAAGGTTATCTTCTTGACAGAATGCCACCTTGTGGAGCTGACAGAGGATGCGGGCCCCCAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS CAA 90 bp | GACCCGTTGGGAAACTGCTGGAACTTGATGCCATGGATGCTGGTGTaGGGCAAAGAAAAGACCACAGAGAAGCTCCAGACTAGGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: DPLGNCWNLMPWMLV*GKEKTTEKLQTRLR Trigger: CCTCAGCCTAGTCTGGAGCTTCTCTGTGGTCTTTTCTTTGCCCAACACCAGCATCCATGGCATCAAGTTCCAGCAGTTTCCCAACGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS CCA 72 bp | CACTCGTCCACAAAGCTGAAGAAGAGCCTGTCCACATaGAAAGGGGTCCAACAGATAGCAAACACGAGGACC | + |
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Preference number: 6 (lower is better) Translates to: HSSTKLKKSLST*KGVQQIANTRT Trigger: GGTCCTCGTGTTTGCTATCTGTTGGACCCCTTTCCATGTGGACAGGCTCTTCTTCAGCTTTGTGGACGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS CAA 72 bp | GGAAACTGCTGGAACTTGATGCCATGGATGCTGGTGTaGGGCAAAGAAAAGACCACAGAGAAGCTCCAGACT | + |
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Preference number: 6 (lower is better) Translates to: GNCWNLMPWMLV*GKEKTTEKLQT Trigger: AGTCTGGAGCTTCTCTGTGGTCTTTTCTTTGCCCAACACCAGCATCCATGGCATCAAGTTCCAGCAGTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS TCA 72 bp | AGGCCAAGTACTCCTCTGTGCTGTTCAAGTACTTCATaGGAGAATCGTGGATCCAGGAAGCATTTTCAAGTT | + |
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Preference number: 6 (lower is better) Translates to: RPSTPLCCSSTS*ENRGSRKHFQV Trigger: AACTTGAAAATGCTTCCTGGATCCACGATTCTCTCATGAAGTACTTGAACAGCACAGAGGAGTACTTGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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| CDS TCA 72 bp | AACAGCATCTTGGTGACTGATTTTCTGGAGGGTCTGTaGATATTCACAGTCACTTTGTCTGCCTCAAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: NSILVTDFLEGL*IFTVTLSASRD Trigger: ATCTCTTGAGGCAGACAAAGTGACTGTGAATATTCACAGACCCTCCAGAAAATCAGTCACCAAGATGCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037682.3 |
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