Pregenerated sensors for NMT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026643Ensembl transcript IDs: ENSMUST00000081932.13, ENSMUST00000091504.5, ENSMUST00000102989.10
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTATAATGAGAAATCTGTCCTGTGTCCAGCACTGGTCCCACTTCTaGACCACTTGTGGGGCCCAGGTGCCCCCTCTCGTGGTAATATCA | + |
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Preference number: 1 (lower is better) Translates to: CIMRNLSCVQHWSHF*TTCGAQVPPLVVIS Trigger: TGATATTACCACGAGAGGGGGCACCTGGGCCCCACAAGTGGTGCAGAAGTGGGACCAGTGCTGGACACAGGACAGATTTCTCATTATACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR TCA 90 bp | GCTGTGACTTCCTTTCCCTCACACATCCTTCACATTGCTGAGGAATaGGATTGCACAGCAGCCGCAAGGTCTCATCAGTCAGCTGTGTAC | + |
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Preference number: 1 (lower is better) Translates to: AVTSFPSHILHIAEE*DCTAAARSHQSAVY Trigger: GTACACAGCTGACTGATGAGACCTTGCGGCTGCTGTGCAATCTCATTCCTCAGCAATGTGAAGGATGTGTGAGGGAAAGGAAGTCACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR CCA 90 bp | CTCTACCGAACTTGGAAAATGGGCCACAGACATGGTCTAGCAAGGTaGGTGAAGCAACTGAAGAAAGTCCTCAGTTGCAACGGAGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: LYRTWKMGHRHGLAR*VKQLKKVLSCNGER Trigger: TCTCTCTCCGTTGCAACTGAGGACTTTCTTCAGTTGCTTCACCCACCTTGCTAGACCATGTCTGTGGCCCATTTTCCAAGTTCGGTAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR TCA 90 bp | GTGCTGACTCCACTCCTCTGGGCATTTAATCTGACCTTAGAGCTGTaGCTTCCTTTCCCTCACACATCCTTCACATTGCTGAGGAATGAG | + |
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Preference number: 1 (lower is better) Translates to: VLTPLLWAFNLTLEL*LPFPHTSFTLLRNE Trigger: CTCATTCCTCAGCAATGTGAAGGATGTGTGAGGGAAAGGAAGTCACAGCTCTAAGGTCAGATTAAATGCCCAGAGGAGTGGAGTCAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR CCA 90 bp | GCACTTAACATTTCTCTACCGAACTTGGAAAATGGGCCACAGACATaGTCTAGCAAGGTGGGTGAAGCAACTGAAGAAAGTCCTCAGTTG | + |
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Preference number: 1 (lower is better) Translates to: ALNISLPNLENGPQT*SSKVGEATEESPQL Trigger: CAACTGAGGACTTTCTTCAGTTGCTTCACCCACCTTGCTAGACCATGTCTGTGGCCCATTTTCCAAGTTCGGTAGAGAAATGTTAAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR CCA 90 bp | AAGAACATCAGTTTCCTACAGCACTTAACATTTCTCTACCGAACTTaGAAAATGGGCCACAGACATGGTCTAGCAAGGTGGGTGAAGCAA | + |
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Preference number: 1 (lower is better) Translates to: KNISFLQHLTFLYRT*KMGHRHGLARWVKQ Trigger: TTGCTTCACCCACCTTGCTAGACCATGTCTGTGGCCCATTTTCCAAGTTCGGTAGAGAAATGTTAAGTGCTGTAGGAAACTGATGTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR TCA 90 bp | AGAAAAGCAGCAGTGACTCTCCTAACAGCAAAGGTTTTCTTAACATaGTGCTGCCATTTCTGTTTGGATCACAGAGACAGTCCCACTTTT | + |
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Preference number: 1 (lower is better) Translates to: RKAAVTLLTAKVFLT*CCHFCLDHRDSPTF Trigger: AAAAGTGGGACTGTCTCTGTGATCCAAACAGAAATGGCAGCATCATGTTAAGAAAACCTTTGCTGTTAGGAGAGTCACTGCTGCTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
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| 3UTR CCA 90 bp | ACTAGCCTGCTGAAGAGCAGAAGACAAACCTGTAATGTACTGATTTaGCTACTATGCTTATGGGACAGACCTGTGTATTTGCTTATGGAA | + |
|
Preference number: 1 (lower is better) Translates to: TSLLKSRRQTCNVLI*LLCLWDRPVYLLME Trigger: TTCCATAAGCAAATACACAGGTCTGTCCCATAAGCATAGTAGCCAAATCAGTACATTACAGGTTTGTCTTCTGCTCTTCAGCAGGCTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
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| 3UTR CCA 90 bp | CAGCGGAGACTGGCTCCCAACACCCTAACTAGAAATGTATACAGTTaGCCATCTATTCTGATTGTTAACAACTACTTCAATTTCACTCAA | + |
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Preference number: 1 (lower is better) Translates to: QRRLAPNTLTRNVYS*PSILIVNNYFNFTQ Trigger: TTGAGTGAAATTGAAGTAGTTGTTAACAATCAGAATAGATGGCCAACTGTATACATTTCTAGTTAGGGTGTTGGGAGCCAGTCTCCGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
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| 3UTR GCA 90 bp | TGCGCATATAAATTCACTGCTTTAAAGGCTGGTACAATGCTTGCTTaGAAGAACATCAGTTTCCTACAGCACTTAACATTTCTCTACCGA | + |
|
Preference number: 1 (lower is better) Translates to: CAYKFTALKAGTMLA*KNISFLQHLTFLYR Trigger: TCGGTAGAGAAATGTTAAGTGCTGTAGGAAACTGATGTTCTTGCAAGCAAGCATTGTACCAGCCTTTAAAGCAGTGAATTTATATGCGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR-3UTR TCA 90 bp | GACAAGACAGTGATGGGTCTTTCTGGCTGGGAGTGGAGCTGTCAGGACTTTACTAATCCACTAGCCTGCTaGAGAGCAGAAGACAAACCT | + |
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Preference number: 2 (lower is better) Translates to: DKTVMGLSGWEWSCQDFTNPLAC*RAEDKP Trigger: AGGTTTGTCTTCTGCTCTTCAGCAGGCTAGTGGATT...AGTAAAGTCCTGACAGCTCCACTCCCAGCCAGAAAGACCCATCACTGTCTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR CAA 90 bp | ACATGGTCTAGCAAGGTGGGTGAAGCAACTGAAGAAAGTCCTCAGTaGCAACGGAGAGAGAGAGAGACACTAAATGTTAAGCAGTACACT | + |
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Preference number: 2 (lower is better) Translates to: TWSSKVGEATEESPQ*QRRERETLNVKQYT Trigger: AGTGTACTGCTTAACATTTAGTGTCTCTCTCTCTCTCCGTTGCAACTGAGGACTTTCTTCAGTTGCTTCACCCACCTTGCTAGACCATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR CAA 90 bp | CAAGAACATCAGTTTCCTACAGCACTTAACATTTCTCTACCGAACTaGGAAAATGGGCCACAGACATGGTCTAGCAAGGTGGGTGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: QEHQFPTALNISLPN*ENGPQTWSSKVGEA Trigger: TGCTTCACCCACCTTGCTAGACCATGTCTGTGGCCCATTTTCCAAGTTCGGTAGAGAAATGTTAAGTGCTGTAGGAAACTGATGTTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR-3UTR TCA 90 bp | AAATGTGACAGTTGGACATGTATAATGAGAAATCTGTCCTGTGTCCAGCACTGGCATCCTTCACATTGCTaGGGAATGAGATTGCACAGC | + |
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Preference number: 2 (lower is better) Translates to: KCDSWTCIMRNLSCVQHWHPSHC*GMRLHS Trigger: GCTGTGCAATCTCATTCCTCAGCAATGTGAAGGATG...CCAGTGCTGGACACAGGACAGATTTCTCATTATACATGTCCAACTGTCACATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR-3UTR GCA 90 bp | AAATGTGACAGTTGGACATGTATAATGAGAAATCTGTCCTGTGTCCAGCACTGGTCCCACTTTTCTCTTTaGAGTGAGAGCTCTATGGAC | + |
|
Preference number: 2 (lower is better) Translates to: KCDSWTCIMRNLSCVQHWSHFSL*SESSMD Trigger: GTCCATAGAGCTCTCACTGCAAAGAGAAAAGTGGGA...CCAGTGCTGGACACAGGACAGATTTCTCATTATACATGTCCAACTGTCACATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR-3UTR CCA 90 bp | AAAAGCCTGATAAGGTTGTTTCATAAGAATTCTCTCCCTGCGCATCATCAGTTTGCAGTGAGAGCTCTATaGACACCTTTAATCCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: KSLIRLFHKNSLPAHHQFAVRAL*TPLIPP Trigger: GGGAGGGATTAAAGGTGTCCATAGAGCTCTCACTGC...AAACTGATGATGCGCAGGGAGAGAATTCTTATGAAACAACCTTATCAGGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR-3UTR CCA 90 bp | AATGTACTGATTTGGCTACTATGCTTATGGGACAGACCTGTGTATTTGCTTATGGCAGTGAGAGCTCTATaGACACCTTTAATCCCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: NVLIWLLCLWDRPVYLLMAVRAL*TPLIPP Trigger: GGGAGGGATTAAAGGTGTCCATAGAGCTCTCACTGC...CATAAGCAAATACACAGGTCTGTCCCATAAGCATAGTAGCCAAATCAGTACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
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| 3UTR-3UTR TCA 90 bp | ATTCTCTCCCTGCGCATCATCAGTTTCCTTGTAATATATAACATCTATCAAGAGCCCAAACTCTGCCTTTaGAACAATCCACTAGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: ILSLRIISFLVIYNIYQEPKLCL*NNPLAC Trigger: GCAGGCTAGTGGATTGTTTCAAAGGCAGAGTTTGGG...CTCTTGATAGATGTTATATATTACAAGGAAACTGATGATGCGCAGGGAGAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR-3UTR CCA 90 bp | AAAAGCCTGATAAGGTTGTTTCATAAGAATTCTCTCCCTGCGCATCATCAGTTTGCTGCCATTTCTGTTTaGATCACAGAGACAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: KSLIRLFHKNSLPAHHQFAAISV*ITETVP Trigger: TGGGACTGTCTCTGTGATCCAAACAGAAATGGCAGC...AAACTGATGATGCGCAGGGAGAGAATTCTTATGAAACAACCTTATCAGGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR-3UTR CCA 90 bp | GGCTACTATGCTTATGGGACAGACCTGTGTATTTGCTTATGGAATAATAAATGTGCTGCCATTTCTGTTTaGATCACAGAGACAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: GYYAYGTDLCICLWNNKCAAISV*ITETVP Trigger: TGGGACTGTCTCTGTGATCCAAACAGAAATGGCAGC...ACATTTATTATTCCATAAGCAAATACACAGGTCTGTCCCATAAGCATAGTAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
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| 3UTR-3UTR GCA 90 bp | CTTATGGGACAGACCTGTGTATTTGCTTATGGAATAATAAATGTGCTAAGTCACTCCCACTTTTCTCTTTaGAGTGAGAGCTCTATGGAC | + |
|
Preference number: 2 (lower is better) Translates to: LMGQTCVFAYGIINVLSHSHFSL*SESSMD Trigger: GTCCATAGAGCTCTCACTGCAAAGAGAAAAGTGGGA...GTGACTTAGCACATTTATTATTCCATAAGCAAATACACAGGTCTGTCCCATAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
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| 3UTR-3UTR GCA 90 bp | CCATGCGCATATAAATTCACTGCTTTAAAGGCTGGTACAATGCTTGCTTGCAAGGGTACATTTTCATATTaGTCCTTAAGTATCTACCAC | + |
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Preference number: 2 (lower is better) Translates to: PCAYKFTALKAGTMLACKGTFSY*SLSIYH Trigger: GTGGTAGATACTTAAGGAGCAATATGAAAATGTACC...CTTGCAAGCAAGCATTGTACCAGCCTTTAAAGCAGTGAATTTATATGCGCATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR-3UTR CCA 90 bp | GTAAAGGCAGGAAGTATCTACTTTGTGGCATCTGACTTAAAGGCCCAGTCTATAAATGTGCTAAGTCACTaGTACATTTTCATATTGCTC | + |
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Preference number: 2 (lower is better) Translates to: VKAGSIYFVASDLKAQSINVLSH*YIFILL Trigger: GAGCAATATGAAAATGTACCAGTGACTTAGCACATT...TATAGACTGGGCCTTTAAGTCAGATGCCACAAAGTAGATACTTCCTGCCTTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR-3UTR TCA 90 bp | ATTCTCTCCCTGCGCATCATCAGTTTCCTTGTAATATATAACATCTATCAAGAGGTTGGCCATCTATTCTaGTTGTTAACAACTACTTCA | + |
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Preference number: 2 (lower is better) Translates to: ILSLRIISFLVIYNIYQEVGHLF*LLTTTS Trigger: TGAAGTAGTTGTTAACAATCAGAATAGATGGCCAAC...CTCTTGATAGATGTTATATATTACAAGGAAACTGATGATGCGCAGGGAGAGAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR-3UTR TCA 90 bp | TATGGGACAGACCTGTGTATTTGCTTATGGAATAATAAATGTGCTAAGTCACTGGTTGGCCATCTATTCTaGTTGTTAACAACTACTTCA | + |
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Preference number: 2 (lower is better) Translates to: YGTDLCICLWNNKCAKSLVGHLF*LLTTTS Trigger: TGAAGTAGTTGTTAACAATCAGAATAGATGGCCAAC...CAGTGACTTAGCACATTTATTATTCCATAAGCAAATACACAGGTCTGTCCCATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
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| 3UTR-3UTR TCA 90 bp | CTTATGGGACAGACCTGTGTATTTGCTTATGGAATAATAAATGTGCTAAGTCACAAGGTTTTCTTAACATaGTGCTGCCATTTCTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: LMGQTCVFAYGIINVLSHKVFLT*CCHFCL Trigger: CAAACAGAAATGGCAGCATCATGTTAAGAAAACCTT...GTGACTTAGCACATTTATTATTCCATAAGCAAATACACAGGTCTGTCCCATAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
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| 3UTR-3UTR TCA 90 bp | GATTTGGCTACTATGCTTATGGGACAGACCTGTGTATTTGCTTATGGAATAATAAAGGTTTTCTTAACATaGTGCTGCCATTTCTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: DLATMLMGQTCVFAYGIIKVFLT*CCHFCL Trigger: CAAACAGAAATGGCAGCATCATGTTAAGAAAACCTT...TATTATTCCATAAGCAAATACACAGGTCTGTCCCATAAGCATAGTAGCCAAATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
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| 3UTR-3UTR CCA 90 bp | AAAAGCCTGATAAGGTTGTTTCATAAGAATTCTCTCCCTGCGCATCATCAGTTTAAGGTGATACACATATaGATCCTTGTTCTGTTTTAC | + |
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Preference number: 2 (lower is better) Translates to: KSLIRLFHKNSLPAHHQFKVIHI*ILVLFY Trigger: GTAAAACAGAACAAGGATCCATATGTGTATCACCTT...AAACTGATGATGCGCAGGGAGAGAATTCTTATGAAACAACCTTATCAGGCTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR-3UTR GCA 90 bp | GATTTGGCTACTATGCTTATGGGACAGACCTGTGTATTTGCTTATGGAATAATAGGTACATTTTCATATTaGTCCTTAAGTATCTACCAC | + |
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Preference number: 2 (lower is better) Translates to: DLATMLMGQTCVFAYGIIGTFSY*SLSIYH Trigger: GTGGTAGATACTTAAGGAGCAATATGAAAATGTACC...TATTATTCCATAAGCAAATACACAGGTCTGTCCCATAAGCATAGTAGCCAAATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
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| 3UTR-3UTR CCA 90 bp | ATTCTCTCCCTGCGCATCATCAGTTTCCTTGTAATATATAACATCTATCAAGAGGCCCAGTCTATACAATaGCCTTGTTTAGTATTTTAT | + |
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Preference number: 2 (lower is better) Translates to: ILSLRIISFLVIYNIYQEAQSIQ*PCLVFY Trigger: ATAAAATACTAAACAAGGCCATTGTATAGACTGGGC...CTCTTGATAGATGTTATATATTACAAGGAAACTGATGATGCGCAGGGAGAGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR CCA 72 bp | CTGTGTCCAGCACTGGTCCCACTTCTGCACCACTTGTaGGGCCCAGGTGCCCCCTCTCGTGGTAATATCAGG | + |
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Preference number: 3 (lower is better) Translates to: LCPALVPLLHHL*GPGAPSRGNIR Trigger: CCTGATATTACCACGAGAGGGGGCACCTGGGCCCCACAAGTGGTGCAGAAGTGGGACCAGTGCTGGACACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR CCA 72 bp | ACGAGGACAGACAAGACAGTGATGGGTCTTTCTGGCTaGGAGTGGAGCTGTCAGGACTTTACTAATCCACTC | + |
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Preference number: 3 (lower is better) Translates to: TRTDKTVMGLSG*EWSCQDFTNPL Trigger: GAGTGGATTAGTAAAGTCCTGACAGCTCCACTCCCAGCCAGAAAGACCCATCACTGTCTTGTCTGTCCTCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR-3UTR CAA 90 bp | GAGCACACTGAACAACTGCCCCAAACTCTGCCTTTGAAACAATCCACTAGCCTGTGCTGCCATTTCTGTTaGGATCACAGAGACAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: EHTEQLPQTLPLKQSTSLCCHFC*DHRDSP Trigger: GGGACTGTCTCTGTGATCCAAACAGAAATGGCAGCA...CAGGCTAGTGGATTGTTTCAAAGGCAGAGTTTGGGGCAGTTGTTCAGTGTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
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| 3UTR TCA 72 bp | TCCTTTCCCTCACACATCCTTCACATTGCTGAGGAATaGGATTGCACAGCAGCCGCAAGGTCTCATCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: SFPSHILHIAEE*DCTAAARSHQS Trigger: TGACTGATGAGACCTTGCGGCTGCTGTGCAATCTCATTCCTCAGCAATGTGAAGGATGTGTGAGGGAAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR TCA 72 bp | CCACTCCTCTGGGCATTTAATCTGACCTTAGAGCTGTaGCTTCCTTTCCCTCACACATCCTTCACATTGCTG | + |
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Preference number: 3 (lower is better) Translates to: PLLWAFNLTLEL*LPFPHTSFTLL Trigger: CAGCAATGTGAAGGATGTGTGAGGGAAAGGAAGTCACAGCTCTAAGGTCAGATTAAATGCCCAGAGGAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR CCA 72 bp | ACTTGGAAAATGGGCCACAGACATGGTCTAGCAAGGTaGGTGAAGCAACTGAAGAAAGTCCTCAGTTGCAAC | + |
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Preference number: 3 (lower is better) Translates to: TWKMGHRHGLAR*VKQLKKVLSCN Trigger: GTTGCAACTGAGGACTTTCTTCAGTTGCTTCACCCACCTTGCTAGACCATGTCTGTGGCCCATTTTCCAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR-3UTR CAA 90 bp | TCTCTACCGAACTTGGAAAATGGGCCACAGACATGGTCTAGCAAGGTGGGTGAACACACATCCTTCACATaGCTGAGGAATGAGATTGCA | + |
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Preference number: 3 (lower is better) Translates to: SLPNLENGPQTWSSKVGEHTSFT*LRNEIA Trigger: TGCAATCTCATTCCTCAGCAATGTGAAGGATGTGTG...TTCACCCACCTTGCTAGACCATGTCTGTGGCCCATTTTCCAAGTTCGGTAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR-3UTR CAA 90 bp | GACAAGACAGTGATGGGTCTTTCTGGCTGGGAGTGGAGCTGTCAGGACTTTACTTTTATATCCAAGCAGTaGCTCTGGCTACTAATTCTC | + |
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Preference number: 3 (lower is better) Translates to: DKTVMGLSGWEWSCQDFTFISKQ*LWLLIL Trigger: GAGAATTAGTAGCCAGAGCAACTGCTTGGATATAAA...AGTAAAGTCCTGACAGCTCCACTCCCAGCCAGAAAGACCCATCACTGTCTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR GCA 72 bp | CTGTTTGGATCACAGAGACAGTCCCACTTTTCTCTTTaGAGTGAGAGCTCTATGGACACCTTTAATCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: LFGSQRQSHFSL*SESSMDTFNPS Trigger: GGAGGGATTAAAGGTGTCCATAGAGCTCTCACTGCAAAGAGAAAAGTGGGACTGTCTCTGTGATCCAAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
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| 3UTR TCA 72 bp | TTCTCAGTTTGTGAGCTGTATAGAACAGCCAACAGGTaGGACAGCCTACAGTCACATTTGGTGACTCCTTTC | + |
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Preference number: 3 (lower is better) Translates to: FSVCELYRTANR*DSLQSHLVTPF Trigger: GAAAGGAGTCACCAAATGTGACTGTAGGCTGTCTCACCTGTTGGCTGTTCTATACAGCTCACAAACTGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR CCA 72 bp | AGTTTCCTACAGCACTTAACATTTCTCTACCGAACTTaGAAAATGGGCCACAGACATGGTCTAGCAAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: SFLQHLTFLYRT*KMGHRHGLARW Trigger: CCACCTTGCTAGACCATGTCTGTGGCCCATTTTCCAAGTTCGGTAGAGAAATGTTAAGTGCTGTAGGAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR TCA 72 bp | GCAGTGACTCTCCTAACAGCAAAGGTTTTCTTAACATaGTGCTGCCATTTCTGTTTGGATCACAGAGACAGT | + |
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Preference number: 3 (lower is better) Translates to: AVTLLTAKVFLT*CCHFCLDHRDS Trigger: ACTGTCTCTGTGATCCAAACAGAAATGGCAGCATCATGTTAAGAAAACCTTTGCTGTTAGGAGAGTCACTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
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| 3UTR CCA 72 bp | AACATCTATCAAGAGTACATTAGGGGCAGAGCTCTATaGCAGAATATGTGCTTACCAGCACATACTATCCCT | + |
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Preference number: 3 (lower is better) Translates to: NIYQEYIRGRAL*QNMCLPAHTIP Trigger: AGGGATAGTATGTGCTGGTAAGCACATATTCTGCCATAGAGCTCTGCCCCTAATGTACTCTTGATAGATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR-3UTR CAA 90 bp | AAATGTGACAGTTGGACATGTATAATGAGAAATCTGTCCTGTGTCCAGCACTGGCAAAACGTCAATTCTTaGGACTATTTCCCCCAACGA | + |
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Preference number: 3 (lower is better) Translates to: KCDSWTCIMRNLSCVQHWQNVNS*DYFPQR Trigger: TCGTTGGGGGAAATAGTCCAAAGAATTGACGTTTTG...CCAGTGCTGGACACAGGACAGATTTCTCATTATACATGTCCAACTGTCACATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR GCA 72 bp | AGAAGACAAACCTGTAATGTACTGATTTGGCTACTATaGTTATGGGACAGACCTGTGTATTTGCTTATGGAA | + |
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Preference number: 3 (lower is better) Translates to: RRQTCNVLIWLL*LWDRPVYLLME Trigger: TTCCATAAGCAAATACACAGGTCTGTCCCATAAGCATAGTAGCCAAATCAGTACATTACAGGTTTGTCTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
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| 3UTR GCA 72 bp | AAATTCACTGCTTTAAAGGCTGGTACAATGCTTGCTTaGAAGAACATCAGTTTCCTACAGCACTTAACATTT | + |
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Preference number: 3 (lower is better) Translates to: KFTALKAGTMLA*KNISFLQHLTF Trigger: AAATGTTAAGTGCTGTAGGAAACTGATGTTCTTGCAAGCAAGCATTGTACCAGCCTTTAAAGCAGTGAATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| 3UTR CCA 72 bp | AACATTCCAGTGGCATCATGTAAGGTGATACACATATaGATCCTTGTTCTGTTTTACAAGTATATCACCATT | + |
|
Preference number: 3 (lower is better) Translates to: NIPVASCKVIHI*ILVLFYKYITI Trigger: AATGGTGATATACTTGTAAAACAGAACAAGGATCCATATGTGTATCACCTTACATGATGCCACTGGAATGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR GCA 90 bp | GCCGCAAGGTCTCATCAGTCAGCTGTGTACTCTCTAGTGAGCACACTGAACAACTCCAGCTCTAGGCTCTaGTGGCTGGCCGCAGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: AARSHQSAVYSLVSTLNNSSSRL*WLAADS Trigger: CGAGTCTGCGGCCAGCCAGCAGAGCCTAGAGCTGGA...GTTGTTCAGTGTGCTCACTAGAGAGTACACAGCTGACTGATGAGACCTTGCGGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
||
| CDS-3UTR CCA 90 bp | GACAAGACAGTGATGGGTCTTTCTGGCTGGGAGTGGAGCTGTCAGGACTTTACTATTCCGCACGTGTCCTaGTCGTCCAGCTCTAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DKTVMGLSGWEWSCQDFTIPHVS*SSSSRL Trigger: GAGCCTAGAGCTGGACGACCAGGACACGTGCGGAAT...AGTAAAGTCCTGACAGCTCCACTCCCAGCCAGAAAGACCCATCACTGTCTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
||
| CDS-3UTR GCA 90 bp | GACAGTCCCACTTTTCTCTTTGCAGTGAGAGCTCTATGGACACCTTTAATCCCTTCCAGCTCTAGGCTCTaGTGGCTGGCCGCAGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: DSPTFLFAVRALWTPLIPSSSRL*WLAADS Trigger: CGAGTCTGCGGCCAGCCAGCAGAGCCTAGAGCTGGA...AGGGATTAAAGGTGTCCATAGAGCTCTCACTGCAAAGAGAAAAGTGGGACTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | GACAGTCCCACTTTTCTCTTTGCAGTGAGAGCTCTATGGACACCTTTAATCCCTCTAGGCTCTGCTGGCTaGCCGCAGACTCGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DSPTFLFAVRALWTPLIPLGSAG*PQTRCP Trigger: AGGACAGCGAGTCTGCGGCCAGCCAGCAGAGCCTAG...AGGGATTAAAGGTGTCCATAGAGCTCTCACTGCAAAGAGAAAAGTGGGACTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR TCA 90 bp | GCCGCAAGGTCTCATCAGTCAGCTGTGTACTCTCTAGTGAGCACACTGAACAACCTACAAACGTGTCAATaGTGTGCTCCCTGGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AARSHQSAVYSLVSTLNNLQTCQ*CAPWAG Trigger: TCCTGCCCAGGGAGCACATCATTGACACGTTTGTAG...GTTGTTCAGTGTGCTCACTAGAGAGTACACAGCTGACTGATGAGACCTTGCGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
||
| CDS-3UTR CCA 90 bp | CAGAGACAGTCCCACTTTTCTCTTTGCAGTGAGAGCTCTATGGACACCTTTAATAGCTCTAGGCTCTGCTaGCTGGCCGCAGACTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QRQSHFSLCSESSMDTFNSSRLC*LAADSL Trigger: CAGCGAGTCTGCGGCCAGCCAGCAGAGCCTAGAGCT...ATTAAAGGTGTCCATAGAGCTCTCACTGCAAAGAGAAAAGTGGGACTGTCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR GCA 90 bp | TGTTTGGATCACAGAGACAGTCCCACTTTTCTCTTTGCAGTGAGAGCTCTATGGCCAGTGGGCCACTTCTaGGTCATCCATCACTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLDHRDSPTFLFAVRALWPVGHF*VIHHWS Trigger: GCTCCAGTGATGGATGACGCAGAAGTGGCCCACTGG...CCATAGAGCTCTCACTGCAAAGAGAAAAGTGGGACTGTCTCTGTGATCCAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | AGTGAGCACACTGAACAACTGCCCCAAACTCTGCCTTTGAAACAATCCACTAGCCCTCATCAATGTTCCTaGCTGGGCCTTGGCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SEHTEQLPQTLPLKQSTSPHQCS*LGLGMQ Trigger: CTGCATGCCAAGGCCCAGCCAGGAACATTGATGAGG...GCTAGTGGATTGTTTCAAAGGCAGAGTTTGGGGCAGTTGTTCAGTGTGCTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | AGTGAGCACACTGAACAACTGCCCCAAACTCTGCCTTTGAAACAATCCACTAGCATCAATGTTCCTGGCTaGGCCTTGGCATGCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SEHTEQLPQTLPLKQSTSINVPG*ALACRQ Trigger: CTGTCTGCATGCCAAGGCCCAGCCAGGAACATTGAT...GCTAGTGGATTGTTTCAAAGGCAGAGTTTGGGGCAGTTGTTCAGTGTGCTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | TTTCTTAACATGATGCTGCCATTTCTGTTTGGATCACAGAGACAGTCCCACTTTAGCTCTAGGCTCTGCTaGCTGGCCGCAGACTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLNMMLPFLFGSQRQSHFSSRLC*LAADSL Trigger: CAGCGAGTCTGCGGCCAGCCAGCAGAGCCTAGAGCT...AAAGTGGGACTGTCTCTGTGATCCAAACAGAAATGGCAGCATCATGTTAAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR GCA 90 bp | GAGCACACTGAACAACTGCCCCAAACTCTGCCTTTGAAACAATCCACTAGCCTGCCTGCTGAAATCTGCTaGCAGATGGCGTTGTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: EHTEQLPQTLPLKQSTSLPAEIC*QMALCL Trigger: TAAACACAACGCCATCTGGCAGCAGATTTCAGCAGG...CAGGCTAGTGGATTGTTTCAAAGGCAGAGTTTGGGGCAGTTGTTCAGTGTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
||
| CDS-3UTR CCA 90 bp | TATGGGACAGACCTGTGTATTTGCTTATGGAATAATAAATGTGCTAAGTCACTGCTGCAGAAGCCATCCTaGGGGGCGCAGAGCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: YGTDLCICLWNNKCAKSLLQKPS*GAQSPQ Trigger: CTGTGGGCTCTGCGCCCCCCAGGATGGCTTCTGCAG...CAGTGACTTAGCACATTTATTATTCCATAAGCAAATACACAGGTCTGTCCCATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | ATGGGACAGACCTGTGTATTTGCTTATGGAATAATAAATGTGCTAAGTCACTGGCTAGGCTCTGCTGGCTaGCCGCAGACTCGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MGQTCVFAYGIINVLSHWLGSAG*PQTRCP Trigger: AGGACAGCGAGTCTGCGGCCAGCCAGCAGAGCCTAG...CCAGTGACTTAGCACATTTATTATTCCATAAGCAAATACACAGGTCTGTCCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| 3UTR CAA 72 bp | AGTGAGCACACTGAACAACTGCCCCAAACTCTGCCTTaGAAACAATCCACTAGCCTGCTGAAGAGCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SEHTEQLPQTLP*KQSTSLLKSRR Trigger: TCTTCTGCTCTTCAGCAGGCTAGTGGATTGTTTCAAAGGCAGAGTTTGGGGCAGTTGTTCAGTGTGCTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR GCA 90 bp | GTAAAGGCAGGAAGTATCTACTTTGTGGCATCTGACTTAAAGGCCCAGTCTATAGGGTTTAGGGATCGGTaGCAATACCTGCAAGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VKAGSIYFVASDLKAQSIGFRDR*QYLQVA Trigger: GGCCACTTGCAGGTATTGGCACCGATCCCTAAACCC...TATAGACTGGGCCTTTAAGTCAGATGCCACAAAGTAGATACTTCCTGCCTTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
||
| CDS-3UTR CCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAACTGCAGAAGCCATCCTaGGGGGCGCAGAGCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKLQKPS*GAQSPQ Trigger: CTGTGGGCTCTGCGCCCCCCAGGATGGCTTCTGCAG...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR TCA 90 bp | GATGCTGCCATTTCTGTTTGGATCACAGAGACAGTCCCACTTTTCTCTTTGCAGTGGGGCTACCCGTTTTaGTCTCAGTTTCTTATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: DAAISVWITETVPLFSLQWGYPF*SQFLMD Trigger: GTCCATAAGAAACTGAGATCAAAACGGGTAGCCCCA...CTGCAAAGAGAAAAGTGGGACTGTCTCTGTGATCCAAACAGAAATGGCAGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR GCA 90 bp | TGTTTGGATCACAGAGACAGTCCCACTTTTCTCTTTGCAGTGAGAGCTCTATGGACACAGCCTGAAAGATaGCTTCCAGGTTCACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLDHRDSPTFLFAVRALWTQPER*LPGSLF Trigger: GAAGAGTGAACCTGGAAGGCATCTTTCAGGCTGTGT...CCATAGAGCTCTCACTGCAAAGAGAAAAGTGGGACTGTCTCTGTGATCCAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR GCA 90 bp | AATGTACTGATTTGGCTACTATGCTTATGGGACAGACCTGTGTATTTGCTTATGCCAGTGGGCCACTTCTaGGTCATCCATCACTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NVLIWLLCLWDRPVYLLMPVGHF*VIHHWS Trigger: GCTCCAGTGATGGATGACGCAGAAGTGGCCCACTGG...CATAAGCAAATACACAGGTCTGTCCCATAAGCATAGTAGCCAAATCAGTACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | TTTGGATCACAGAGACAGTCCCACTTTTCTCTTTGCAGTGAGAGCTCTATGGACTGTGTGTCCCAAAACTaGTATCTGCGTTTTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FGSQRQSHFSLCSESSMDCVSQN*YLRFVA Trigger: GGCCACAAAACGCAGATACCAGTTTTGGGACACACA...GTCCATAGAGCTCTCACTGCAAAGAGAAAAGTGGGACTGTCTCTGTGATCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | TGTTTGGATCACAGAGACAGTCCCACTTTTCTCTTTGCAGTGAGAGCTCTATGGTTCAGAGTCTGTCCCTaGACACCTCCAGTTGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: CLDHRDSPTFLFAVRALWFRVCP*TPPVVQ Trigger: TTGTACAACTGGAGGTGTCCAGGGACAGACTCTGAA...CCATAGAGCTCTCACTGCAAAGAGAAAAGTGGGACTGTCTCTGTGATCCAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR TCA 90 bp | GATGCTGCCATTTCTGTTTGGATCACAGAGACAGTCCCACTTTTCTCTTTGCAGCAGCAGAAACTCAGGTaGATAGTCAAAGCGGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: DAAISVWITETVPLFSLQQQKLR*IVKAEH Trigger: ATGTTCCGCTTTGACTATTCACCTGAGTTTCTGCTG...CTGCAAAGAGAAAAGTGGGACTGTCTCTGTGATCCAAACAGAAATGGCAGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR TCA 90 bp | CAGAGACAGTCCCACTTTTCTCTTTGCAGTGAGAGCTCTATGGACACCTTTAATTGGGGCTACCCGTTTTaGTCTCAGTTTCTTATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QRQSHFSLCSESSMDTFNWGYPF*SQFLMD Trigger: GTCCATAAGAAACTGAGATCAAAACGGGTAGCCCCA...ATTAAAGGTGTCCATAGAGCTCTCACTGCAAAGAGAAAAGTGGGACTGTCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR TCA 90 bp | AAATGTGACAGTTGGACATGTATAATGAGAAATCTGTCCTGTGTCCAGCACTGGGCAGTATACACAGCCTaGAAGATGCCTTCCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KCDSWTCIMRNLSCVQHWAVYTA*KMPSRF Trigger: GAACCTGGAAGGCATCTTTCAGGCTGTGTATACTGC...CCAGTGCTGGACACAGGACAGATTTCTCATTATACATGTCCAACTGTCACATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
||
| CDS-3UTR TCA 90 bp | GAGCACACTGAACAACTGCCCCAAACTCTGCCTTTGAAACAATCCACTAGCCTGATGTTTCTACTCAGGTaGGAAAATTTCACTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: EHTEQLPQTLPLKQSTSLMFLLR*ENFTST Trigger: GGTGGAAGTGAAATTTTCTCACCTGAGTAGAAACAT...CAGGCTAGTGGATTGTTTCAAAGGCAGAGTTTGGGGCAGTTGTTCAGTGTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR GCA 90 bp | CAGAGACAGTCCCACTTTTCTCTTTGCAGTGAGAGCTCTATGGACACCTTTAATACACAGCCTGAAAGATaGCTTCCAGGTTCACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QRQSHFSLCSESSMDTFNTQPER*LPGSLF Trigger: GAAGAGTGAACCTGGAAGGCATCTTTCAGGCTGTGT...ATTAAAGGTGTCCATAGAGCTCTCACTGCAAAGAGAAAAGTGGGACTGTCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | GATGCTGCCATTTCTGTTTGGATCACAGAGACAGTCCCACTTTTCTCTTTGCAGTTGCGGCAAAGAATATaGTTCCTGGCGGATATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DAAISVWITETVPLFSLQLRQRI*FLADIV Trigger: GACAATATCCGCCAGGAACCATATTCTTTGCCGCAA...CTGCAAAGAGAAAAGTGGGACTGTCTCTGTGATCCAAACAGAAATGGCAGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | GAGCACACTGAACAACTGCCCCAAACTCTGCCTTTGAAACAATCCACTAGCCTGCCAGGTTCACTCTTCTaGTTATTTCTCGAATCAACA | + |
|
Preference number: 4 (lower is better) Translates to: EHTEQLPQTLPLKQSTSLPGSLF*LFLEST Trigger: TGTTGATTCGAGAAATAACCAGAAGAGTGAACCTGG...CAGGCTAGTGGATTGTTTCAAAGGCAGAGTTTGGGGCAGTTGTTCAGTGTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | AAAAGCCTGATAAGGTTGTTTCATAAGAATTCTCTCCCTGCGCATCATCAGTTTCTTCCACCAGTTTCCTaGGGTTTAGGGATCGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KSLIRLFHKNSLPAHHQFLPPVS*GLGIGA Trigger: GGCACCGATCCCTAAACCCCAGGAAACTGGTGGAAG...AAACTGATGATGCGCAGGGAGAGAATTCTTATGAAACAACCTTATCAGGCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
||
| CDS-3UTR CCA 90 bp | TATGGGACAGACCTGTGTATTTGCTTATGGAATAATAAATGTGCTAAGTCACTGATTCCGCACGTGTCCTaGTCGTCCAGCTCTAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YGTDLCICLWNNKCAKSLIPHVS*SSSSRL Trigger: GAGCCTAGAGCTGGACGACCAGGACACGTGCGGAAT...CAGTGACTTAGCACATTTATTATTCCATAAGCAAATACACAGGTCTGTCCCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| 3UTR CAA 72 bp | AGCAAGGTGGGTGAAGCAACTGAAGAAAGTCCTCAGTaGCAACGGAGAGAGAGAGAGACACTAAATGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SKVGEATEESPQ*QRRERETLNVK Trigger: CTTAACATTTAGTGTCTCTCTCTCTCTCCGTTGCAACTGAGGACTTTCTTCAGTTGCTTCACCCACCTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
||
| 3UTR CAA 72 bp | CAGTTTCCTACAGCACTTAACATTTCTCTACCGAACTaGGAAAATGGGCCACAGACATGGTCTAGCAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QFPTALNISLPN*ENGPQTWSSKV Trigger: CACCTTGCTAGACCATGTCTGTGGCCCATTTTCCAAGTTCGGTAGAGAAATGTTAAGTGCTGTAGGAAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
||
| CDS-3UTR TCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAACATGGCTGCTCCTGCTaGAATCTGCTGCCAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKHGCSC*NLLPDG Trigger: GCCATCTGGCAGCAGATTTCAGCAGGAGCAGCCATG...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 |
||
| CDS-3UTR GCA 90 bp | GGCTACTATGCTTATGGGACAGACCTGTGTATTTGCTTATGGAATAATAAATGTACTCGGACTCCACAGTaGCACTGCAGAAGCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GYYAYGTDLCICLWNNKCTRTPQ*HCRSHP Trigger: AGGATGGCTTCTGCAGTGGCACTGTGGAGTCCGAGT...ACATTTATTATTCCATAAGCAAATACACAGGTCTGTCCCATAAGCATAGTAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR GCA 90 bp | CTCCTTAAGTATCTACCACATGTCAATTCTATAAACATTCCAGTGGCATCATGTGGGTTTAGGGATCGGTaGCAATACCTGCAAGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLKYLPHVNSINIPVASCGFRDR*QYLQVA Trigger: GGCCACTTGCAGGTATTGGCACCGATCCCTAAACCC...ACATGATGCCACTGGAATGTTTATAGAATTGACATGTGGTAGATACTTAAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR GCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAACCAGTGGGCCACTTCTaGGTCATCCATCACTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKPVGHF*VIHHWS Trigger: GCTCCAGTGATGGATGACGCAGAAGTGGCCCACTGG...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | AATGTACTGATTTGGCTACTATGCTTATGGGACAGACCTGTGTATTTGCTTATGATCAATGTTCCTGGCTaGGCCTTGGCATGCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: NVLIWLLCLWDRPVYLLMINVPG*ALACRQ Trigger: CTGTCTGCATGCCAAGGCCCAGCCAGGAACATTGAT...CATAAGCAAATACACAGGTCTGTCCCATAAGCATAGTAGCCAAATCAGTACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | TATGGGACAGACCTGTGTATTTGCTTATGGAATAATAAATGTGCTAAGTCACTGCTTCCACCAGTTTCCTaGGGTTTAGGGATCGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: YGTDLCICLWNNKCAKSLLPPVS*GLGIGA Trigger: GGCACCGATCCCTAAACCCCAGGAAACTGGTGGAAG...CAGTGACTTAGCACATTTATTATTCCATAAGCAAATACACAGGTCTGTCCCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | AAAAGCCTGATAAGGTTGTTTCATAAGAATTCTCTCCCTGCGCATCATCAGTTTCAGTCAGCTTCCCACTaGGGTTCTCCACTACAAACG | + |
|
Preference number: 4 (lower is better) Translates to: KSLIRLFHKNSLPAHHQFQSASH*GSPLQT Trigger: CGTTTGTAGTGGAGAACCCCAGTGGGAAGCTGACTG...AAACTGATGATGCGCAGGGAGAGAATTCTTATGAAACAACCTTATCAGGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
||
| 3UTR CAA 72 bp | CTGTCCACAAGAGGCCAGAGAGCAAACATTTTAACTTaGCAGGCAATACATACAGTCCAGTCTGTCACAACT | + |
|
Preference number: 4 (lower is better) Translates to: LSTRGQRANILT*QAIHTVQSVTT Trigger: AGTTGTGACAGACTGGACTGTATGTATTGCCTGCAAAGTTAAAATGTTTGCTCTCTGGCCTCTTGTGGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
||
| CDS-3UTR TCA 90 bp | TTTGGATCACAGAGACAGTCCCACTTTTCTCTTTGCAGTGAGAGCTCTATGGACCACCATGAGATGTTATaGCTTCATTCAATTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FGSQRQSHFSLCSESSMDHHEML*LHSIWA Trigger: TGCCCAAATTGAATGAAGTCATAACATCTCATGGTG...GTCCATAGAGCTCTCACTGCAAAGAGAAAAGTGGGACTGTCTCTGTGATCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR TCA 90 bp | TATGGGACAGACCTGTGTATTTGCTTATGGAATAATAAATGTGCTAAGTCACTGCTACAAACGTGTCAATaGTGTGCTCCCTGGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YGTDLCICLWNNKCAKSLLQTCQ*CAPWAG Trigger: TCCTGCCCAGGGAGCACATCATTGACACGTTTGTAG...CAGTGACTTAGCACATTTATTATTCCATAAGCAAATACACAGGTCTGTCCCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR TCA 90 bp | TGTTTGGATCACAGAGACAGTCCCACTTTTCTCTTTGCAGTGAGAGCTCTATGGTTTTTAGAAGACTGCTaGATCTTAATCTCCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CLDHRDSPTFLFAVRALWFLEDC*ILISWE Trigger: CTCCCAGGAGATTAAGATTCAGCAGTCTTCTAAAAA...CCATAGAGCTCTCACTGCAAAGAGAAAAGTGGGACTGTCTCTGTGATCCAAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102989.10 |
||
| CDS-3UTR GCA 90 bp | CTTATGGGACAGACCTGTGTATTTGCTTATGGAATAATAAATGTGCTAAGTCACGCTCCTGCTGAAATCTaGTGCCAGATGGCGTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LMGQTCVFAYGIINVLSHAPAEI*CQMALC Trigger: ACACAACGCCATCTGGCAGCAGATTTCAGCAGGAGC...GTGACTTAGCACATTTATTATTCCATAAGCAAATACACAGGTCTGTCCCATAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
||
| CDS-3UTR GCA 90 bp | CCATGCGCATATAAATTCACTGCTTTAAAGGCTGGTACAATGCTTGCTTGCAAGCCCAAAACTGGTATCTaGGTTTTGTGGCCTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: PCAYKFTALKAGTMLACKPKTGI*VLWPHQ Trigger: TTGATGAGGCCACAAAACGCAGATACCAGTTTTGGG...CTTGCAAGCAAGCATTGTACCAGCCTTTAAAGCAGTGAATTTATATGCGCATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
||
| CDS-3UTR GCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAAACTCGGACTCCACAGTaGCACTGCAGAAGCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKTRTPQ*HCRSHP Trigger: AGGATGGCTTCTGCAGTGGCACTGTGGAGTCCGAGT...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR GCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAAGGGTTTAGGGATCGGTaGCAATACCTGCAAGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKGFRDR*QYLQVA Trigger: GGCCACTTGCAGGTATTGGCACCGATCCCTAAACCC...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | TTTCTTAACATGATGCTGCCATTTCTGTTTGGATCACAGAGACAGTCCCACTTTTGTGTGTCCCAAAACTaGTATCTGCGTTTTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLNMMLPFLFGSQRQSHFCVSQN*YLRFVA Trigger: GGCCACAAAACGCAGATACCAGTTTTGGGACACACA...AAAGTGGGACTGTCTCTGTGATCCAAACAGAAATGGCAGCATCATGTTAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAACTTCCACCAGTTTCCTaGGGTTTAGGGATCGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKLPPVS*GLGIGA Trigger: GGCACCGATCCCTAAACCCCAGGAAACTGGTGGAAG...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | TATGGGACAGACCTGTGTATTTGCTTATGGAATAATAAATGTGCTAAGTCACTGCAGTCAGCTTCCCACTaGGGTTCTCCACTACAAACG | + |
|
Preference number: 4 (lower is better) Translates to: YGTDLCICLWNNKCAKSLQSASH*GSPLQT Trigger: CGTTTGTAGTGGAGAACCCCAGTGGGAAGCTGACTG...CAGTGACTTAGCACATTTATTATTCCATAAGCAAATACACAGGTCTGTCCCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR TCA 90 bp | CTCCTTAAGTATCTACCACATGTCAATTCTATAAACATTCCAGTGGCATCATGTGCAGTATACACAGCCTaGAAGATGCCTTCCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLKYLPHVNSINIPVASCAVYTA*KMPSRF Trigger: GAACCTGGAAGGCATCTTTCAGGCTGTGTATACTGC...ACATGATGCCACTGGAATGTTTATAGAATTGACATGTGGTAGATACTTAAGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR TCA 90 bp | CAGAGACAGTCCCACTTTTCTCTTTGCAGTGAGAGCTCTATGGACACCTTTAATATGTTTCTACTCAGGTaGGAAAATTTCACTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: QRQSHFSLCSESSMDTFNMFLLR*ENFTST Trigger: GGTGGAAGTGAAATTTTCTCACCTGAGTAGAAACAT...ATTAAAGGTGTCCATAGAGCTCTCACTGCAAAGAGAAAAGTGGGACTGTCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR TCA 90 bp | AAAAGCCTGATAAGGTTGTTTCATAAGAATTCTCTCCCTGCGCATCATCAGTTTGCTCTCGGACTGCTTTaGTGTCTTTTGGTTCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: KSLIRLFHKNSLPAHHQFALGLL*CLLVPL Trigger: CAATGGAACCAAAAGACATCAAAGCAGTCCGAGAGC...AAACTGATGATGCGCAGGGAGAGAATTCTTATGAAACAACCTTATCAGGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
||
| CDS-3UTR TCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAACTACAAACGTGTCAATaGTGTGCTCCCTGGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKLQTCQ*CAPWAG Trigger: TCCTGCCCAGGGAGCACATCATTGACACGTTTGTAG...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR GCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAAGCTCCTGCTGAAATCTaGTGCCAGATGGCGTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKAPAEI*CQMALC Trigger: ACACAACGCCATCTGGCAGCAGATTTCAGCAGGAGC...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 |
||
| CDS-3UTR CCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAAATCAATGTTCCTGGCTaGGCCTTGGCATGCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKINVPG*ALACRQ Trigger: CTGTCTGCATGCCAAGGCCCAGCCAGGAACATTGAT...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | AATGTACTGATTTGGCTACTATGCTTATGGGACAGACCTGTGTATTTGCTTATGGGTATCTGCGTTTTGTaGCCTCATCAATGTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NVLIWLLCLWDRPVYLLMGICVL*PHQCSW Trigger: CCAGGAACATTGATGAGGCCACAAAACGCAGATACC...CATAAGCAAATACACAGGTCTGTCCCATAAGCATAGTAGCCAAATCAGTACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | TTTGGATCACAGAGACAGTCCCACTTTTCTCTTTGCAGTGAGAGCTCTATGGACAAAGAATATGGTTCCTaGCGGATATTGTCTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FGSQRQSHFSLCSESSMDKEYGS*RILSLS Trigger: AGACAAAGACAATATCCGCCAGGAACCATATTCTTT...GTCCATAGAGCTCTCACTGCAAAGAGAAAAGTGGGACTGTCTCTGTGATCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | CAGAGACAGTCCCACTTTTCTCTTTGCAGTGAGAGCTCTATGGACACCTTTAATAATTCGGATGTTTGCTaGAATGGCACTTATGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: QRQSHFSLCSESSMDTFNNSDVC*NGTYET Trigger: GGTTTCATAAGTGCCATTCCAGCAAACATCCGAATT...ATTAAAGGTGTCCATAGAGCTCTCACTGCAAAGAGAAAAGTGGGACTGTCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAACAGTCAGCTTCCCACTaGGGTTCTCCACTACAAACG | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKQSASH*GSPLQT Trigger: CGTTTGTAGTGGAGAACCCCAGTGGGAAGCTGACTG...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR TCA 90 bp | AAATGTGACAGTTGGACATGTATAATGAGAAATCTGTCCTGTGTCCAGCACTGGGGTTCAATTGCACCATaGGATGTTATGACTTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: KCDSWTCIMRNLSCVQHWGSIAP*DVMTSF Trigger: GAATGAAGTCATAACATCTCATGGTGCAATTGAACC...CCAGTGCTGGACACAGGACAGATTTCTCATTATACATGTCCAACTGTCACATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
||
| CDS-3UTR TCA 90 bp | GGACAGACCTGTGTATTTGCTTATGGAATAATAAATGTGCTAAGTCACTGGTACCAGCAGAAACTCAGGTaGATAGTCAAAGCGGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: GQTCVFAYGIINVLSHWYQQKLR*IVKAEH Trigger: ATGTTCCGCTTTGACTATTCACCTGAGTTTCTGCTG...GTACCAGTGACTTAGCACATTTATTATTCCATAAGCAAATACACAGGTCTGTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR TCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAAGCAGTATACACAGCCTaGAAGATGCCTTCCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKAVYTA*KMPSRF Trigger: GAACCTGGAAGGCATCTTTCAGGCTGTGTATACTGC...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR TCA 90 bp | CTCCTTAAGTATCTACCACATGTCAATTCTATAAACATTCCAGTGGCATCATGTGCTCTCGGACTGCTTTaGTGTCTTTTGGTTCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LLKYLPHVNSINIPVASCALGLL*CLLVPL Trigger: CAATGGAACCAAAAGACATCAAAGCAGTCCGAGAGC...ACATGATGCCACTGGAATGTTTATAGAATTGACATGTGGTAGATACTTAAGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAAGATGGTGGGATTCCATaGCTGCTCCTGCTGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKDGGIP*LLLLKS Trigger: AGATTTCAGCAGGAGCAGCCATGGAATCCCACCATC...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091504.5 |
||
| CDS-3UTR TCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAATGGGGCTACCCGTTTTaGTCTCAGTTTCTTATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKWGYPF*SQFLMD Trigger: GTCCATAAGAAACTGAGATCAAAACGGGTAGCCCCA...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR TCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAAGCTCTCGGACTGCTTTaGTGTCTTTTGGTTCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKALGLL*CLLVPL Trigger: CAATGGAACCAAAAGACATCAAAGCAGTCCGAGAGC...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR GCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAACCTGCTGAAATCTGCTaGCAGATGGCGTTGTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKPAEIC*QMALCL Trigger: TAAACACAACGCCATCTGGCAGCAGATTTCAGCAGG...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 |
||
| CDS-3UTR GCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAAACACAGCCTGAAAGATaGCTTCCAGGTTCACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKTQPER*LPGSLF Trigger: GAAGAGTGAACCTGGAAGGCATCTTTCAGGCTGTGT...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAAGGTATCTGCGTTTTGTaGCCTCATCAATGTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKGICVL*PHQCSW Trigger: CCAGGAACATTGATGAGGCCACAAAACGCAGATACC...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAATGTGTGTCCCAAAACTaGTATCTGCGTTTTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKCVSQN*YLRFVA Trigger: GGCCACAAAACGCAGATACCAGTTTTGGGACACACA...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | AAATGTGACAGTTGGACATGTATAATGAGAAATCTGTCCTGTGTCCAGCACTGGGATATTGTCTTTGTCTaGTTCAATTGCACCATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KCDSWTCIMRNLSCVQHWDIVFV*FNCTMR Trigger: TCTCATGGTGCAATTGAACCAGACAAAGACAATATC...CCAGTGCTGGACACAGGACAGATTTCTCATTATACATGTCCAACTGTCACATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
||
| CDS-3UTR CCA 90 bp | TTTGGCTACTATGCTTATGGGACAGACCTGTGTATTTGCTTATGGAATAATAAATTCAGAGTCTGTCCCTaGACACCTCCAGTTGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: FGYYAYGTDLCICLWNNKFRVCP*TPPVVQ Trigger: TTGTACAACTGGAGGTGTCCAGGGACAGACTCTGAA...TTTATTATTCCATAAGCAAATACACAGGTCTGTCCCATAAGCATAGTAGCCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAATTCAGAGTCTGTCCCTaGACACCTCCAGTTGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKFRVCP*TPPVVQ Trigger: TTGTACAACTGGAGGTGTCCAGGGACAGACTCTGAA...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR TCA 90 bp | ATGGGACAGACCTGTGTATTTGCTTATGGAATAATAAATGTGCTAAGTCACTGGCACCATGAGATGTTATaGCTTCATTCAATTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MGQTCVFAYGIINVLSHWHHEML*LHSIWA Trigger: TGCCCAAATTGAATGAAGTCATAACATCTCATGGTG...CCAGTGACTTAGCACATTTATTATTCCATAAGCAAATACACAGGTCTGTCCCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR TCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAACAGCAGAAACTCAGGTaGATAGTCAAAGCGGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKQQKLR*IVKAEH Trigger: ATGTTCCGCTTTGACTATTCACCTGAGTTTCTGCTG...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR TCA 90 bp | GGCTACTATGCTTATGGGACAGACCTGTGTATTTGCTTATGGAATAATAAATGTCATTGGTCTCAAACCTaGAGTCTTTGTAACATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GYYAYGTDLCICLWNNKCHWSQT*SLCNIW Trigger: CCAGATGTTACAAAGACTTCAGGTTTGAGACCAATG...ACATTTATTATTCCATAAGCAAATACACAGGTCTGTCCCATAAGCATAGTAGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR TCA 90 bp | TATGGGACAGACCTGTGTATTTGCTTATGGAATAATAAATGTGCTAAGTCACTGCATTGGTCTCAAACCTaGAGTCTTTGTAACATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YGTDLCICLWNNKCAKSLHWSQT*SLCNIW Trigger: CCAGATGTTACAAAGACTTCAGGTTTGAGACCAATG...CAGTGACTTAGCACATTTATTATTCCATAAGCAAATACACAGGTCTGTCCCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAATTGCGGCAAAGAATATaGTTCCTGGCGGATATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKLRQRI*FLADIV Trigger: GACAATATCCGCCAGGAACCATATTCTTTGCCGCAA...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | TTTGGCTACTATGCTTATGGGACAGACCTGTGTATTTGCTTATGGAATAATAAATTGCGGCAAAGAATATaGTTCCTGGCGGATATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FGYYAYGTDLCICLWNNKLRQRI*FLADIV Trigger: GACAATATCCGCCAGGAACCATATTCTTTGCCGCAA...TTTATTATTCCATAAGCAAATACACAGGTCTGTCCCATAAGCATAGTAGCCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | ATGGGACAGACCTGTGTATTTGCTTATGGAATAATAAATGTGCTAAGTCACTGGAATTCGGATGTTTGCTaGAATGGCACTTATGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: MGQTCVFAYGIINVLSHWNSDVC*NGTYET Trigger: GGTTTCATAAGTGCCATTCCAGCAAACATCCGAATT...CCAGTGACTTAGCACATTTATTATTCCATAAGCAAATACACAGGTCTGTCCCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR TCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAATGTTTAGAAGACTGCTaGATCTTAATCTCCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKCLEDC*ILISWE Trigger: CTCCCAGGAGATTAAGATTCAGCAGTCTTCTAAACA...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 |
||
| CDS-3UTR TCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAACATTGGTCTCAAACCTaGAGTCTTTGTAACATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKHWSQT*SLCNIW Trigger: CCAGATGTTACAAAGACTTCAGGTTTGAGACCAATG...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | AATGTACTGATTTGGCTACTATGCTTATGGGACAGACCTGTGTATTTGCTTATGGATATTGTCTTTGTCTaGTTCAATTGCACCATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NVLIWLLCLWDRPVYLLMDIVFV*FNCTMR Trigger: TCTCATGGTGCAATTGAACCAGACAAAGACAATATC...CATAAGCAAATACACAGGTCTGTCCCATAAGCATAGTAGCCAAATCAGTACATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | GATTTGGCTACTATGCTTATGGGACAGACCTGTGTATTTGCTTATGGAATAATACCAGGTTCACTCTTCTaGTTATTTCTCGAATCAACA | + |
|
Preference number: 4 (lower is better) Translates to: DLATMLMGQTCVFAYGIIPGSLF*LFLEST Trigger: TGTTGATTCGAGAAATAACCAGAAGAGTGAACCTGG...TATTATTCCATAAGCAAATACACAGGTCTGTCCCATAAGCATAGTAGCCAAATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR TCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAACACCATGAGATGTTATaGCTTCATTCAATTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKHHEML*LHSIWA Trigger: TGCCCAAATTGAATGAAGTCATAACATCTCATGGTG...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR TCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAAGGTTCAATTGCACCATaGGATGTTATGACTTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKGSIAP*DVMTSF Trigger: GAATGAAGTCATAACATCTCATGGTGCAATTGAACC...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR TCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAAATGTTTCTACTCAGGTaGGAAAATTTCACTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKMFLLR*ENFTST Trigger: GGTGGAAGTGAAATTTTCTCACCTGAGTAGAAACAT...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAAAATTCGGATGTTTGCTaGAATGGCACTTATGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKNSDVC*NGTYET Trigger: GGTTTCATAAGTGCCATTCCAGCAAACATCCGAATT...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAACCAGGTTCACTCTTCTaGTTATTTCTCGAATCAACA | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKPGSLF*LFLEST Trigger: TGTTGATTCGAGAAATAACCAGAAGAGTGAACCTGG...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR GCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAATTTGTCTGGTTCAATTaGACCATGAGATGTTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKFVWFN*TMRCYD Trigger: GTCATAACATCTCATGGTGCAATTGAACCAGACAAA...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR GCA 90 bp | TTTGGCTACTATGCTTATGGGACAGACCTGTGTATTTGCTTATGGAATAATAAATTTGTCTGGTTCAATTaGACCATGAGATGTTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: FGYYAYGTDLCICLWNNKFVWFN*TMRCYD Trigger: GTCATAACATCTCATGGTGCAATTGAACCAGACAAA...TTTATTATTCCATAAGCAAATACACAGGTCTGTCCCATAAGCATAGTAGCCAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAAGATATTGTCTTTGTCTaGTTCAATTGCACCATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKDIVFV*FNCTMR Trigger: TCTCATGGTGCAATTGAACCAGACAAAGACAATATC...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | CATTTAATAAACAGAAAAGCAGCAGTGACTCTCCTAACAGCAAAGGTTTTCTTAAAAGAATATGGTTCCTaGCGGATATTGTCTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLINRKAAVTLLTAKVFLKEYGS*RILSLS Trigger: AGACAAAGACAATATCCGCCAGGAACCATATTCTTT...TAAGAAAACCTTTGCTGTTAGGAGAGTCACTGCTGCTTTTCTGTTTATTAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CCA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAAAAAGAATATGGTTCCTaGCGGATATTGTCTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TQLVLLFFFGMTFPGITKKEYGS*RILSLS Trigger: AGACAAAGACAATATCCGCCAGGAACCATATTCTTT...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| 3UTR CAA 72 bp | CACAATATGGATACAGAGAGCATAGGGCAGTGTAACTaGAGATTGTTGCTTTTACATTTGGTTTTAACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HNMDTESIGQCN*RLLLLHLVLTV Trigger: AACTGTTAAAACCAAATGTAAAAGCAACAATCTCAAGTTACACTGCCCTATGCTCTCTGTATCCATATTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
||
| CDS CCA 90 bp | TGTTCGGTCTCCTCCTCATTGTCTCCGTCTATTCCGCACGTGTCCTaGTCGTCCAGCTCTAGGCTCTGCTGGCTGGCCGCAGACTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CSVSSSLSPSIPHVS*SSSSRLCWLAADSL Trigger: CAGCGAGTCTGCGGCCAGCCAGCAGAGCCTAGAGCTGGACGACCAGGACACGTGCGGAATAGACGGAGACAATGAGGAGGAGACCGAACA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS GCA 90 bp | GTCAGCTTCCCACTGGGGTTCTCCACTACAAACGTGTCAATGATGTaGTCCCTGGGCAGGAACCAGTGGGCCACTTCTGCGTCATCCATC | + |
|
Preference number: 5 (lower is better) Translates to: VSFPLGFSTTNVSMM*SLGRNQWATSASSI Trigger: GATGGATGACGCAGAAGTGGCCCACTGGTTCCTGCCCAGGGAGCACATCATTGACACGTTTGTAGTGGAGAACCCCAGTGGGAAGCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS TCA 90 bp | AGTCAGTCAGCTTCCCACTGGGGTTCTCCACTACAAACGTGTCAATaGTGTGCTCCCTGGGCAGGAACCAGTGGGCCACTTCTGCGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SQSASHWGSPLQTCQ*CAPWAGTSGPLLRH Trigger: ATGACGCAGAAGTGGCCCACTGGTTCCTGCCCAGGGAGCACATCATTGACACGTTTGTAGTGGAGAACCCCAGTGGGAAGCTGACTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS CCA 90 bp | CCAAAACTGGTATCTGCGTTTTGTGGCCTCATCAATGTTCCTGGCTaGGCCTTGGCATGCAGACAGCAGCTCCATTGCTCTCTGGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: PKLVSAFCGLINVPG*ALACRQQLHCSLDV Trigger: GACATCCAGAGAGCAATGGAGCTGCTGTCTGCATGCCAAGGCCCAGCCAGGAACATTGATGAGGCCACAAAACGCAGATACCAGTTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS CCA 90 bp | TGTCCCAAAACTGGTATCTGCGTTTTGTGGCCTCATCAATGTTCCTaGCTGGGCCTTGGCATGCAGACAGCAGCTCCATTGCTCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: CPKTGICVLWPHQCS*LGLGMQTAAPLLSG Trigger: TCCAGAGAGCAATGGAGCTGCTGTCTGCATGCCAAGGCCCAGCCAGGAACATTGATGAGGCCACAAAACGCAGATACCAGTTTTGGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS CCA 90 bp | ATTTGGGCACTGGCTGTGTGTCCCAAAACTGGTATCTGCGTTTTGTaGCCTCATCAATGTTCCTGGCTGGGCCTTGGCATGCAGACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: IWALAVCPKTGICVL*PHQCSWLGLGMQTA Trigger: TGCTGTCTGCATGCCAAGGCCCAGCCAGGAACATTGATGAGGCCACAAAACGCAGATACCAGTTTTGGGACACACAGCCAGTGCCCAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS CCA 90 bp | CCGCAGTATACACAGCCTGAAAGATGCCTTCCAGGTTCACTCTTCTaGTTATTTCTCGAATCAACACTGGGGCTACCCGTTTTGATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PQYTQPERCLPGSLF*LFLESTLGLPVLIS Trigger: TGAGATCAAAACGGGTAGCCCCAGTGTTGATTCGAGAAATAACCAGAAGAGTGAACCTGGAAGGCATCTTTCAGGCTGTGTATACTGCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR CAA 90 bp | GAGCACACTGAACAACTGCCCCAAACTCTGCCTTTGAAACAATCCACTAGCCTGTGGCGGATATTGTCTTaGTCTGGTTCAATTGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: EHTEQLPQTLPLKQSTSLWRILS*SGSIAP Trigger: TGGTGCAATTGAACCAGACAAAGACAATATCCGCCA...CAGGCTAGTGGATTGTTTCAAAGGCAGAGTTTGGGGCAGTTGTTCAGTGTGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CAA 90 bp | TGTTTGGATCACAGAGACAGTCCCACTTTTCTCTTTGCAGTGAGAGCTCTATGGACTGGTATCTGCGTTTaGTGGCCTCATCAATGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CLDHRDSPTFLFAVRALWTGICV*WPHQCS Trigger: GGAACATTGATGAGGCCACAAAACGCAGATACCAGT...CCATAGAGCTCTCACTGCAAAGAGAAAAGTGGGACTGTCTCTGTGATCCAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CAA 90 bp | GATGCTGCCATTTCTGTTTGGATCACAGAGACAGTCCCACTTTTCTCTTTGCAGCTGGGGCTACCCGTTTaGATCTCAGTTTCTTATGGA | + |
|
Preference number: 5 (lower is better) Translates to: DAAISVWITETVPLFSLQLGLPV*ISVSYG Trigger: TCCATAAGAAACTGAGATCAAAACGGGTAGCCCCAG...CTGCAAAGAGAAAAGTGGGACTGTCTCTGTGATCCAAACAGAAATGGCAGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS GCA 90 bp | GTTGTGTTTAGAAGACTGCTGAATCTTAATCTCCTGGGAGTCAGATaGAGAGTCGGACTTGGTACCCCCAGAATTTGGCTTCTCCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VVFRRLLNLNLLGVR*RVGLGTPRIWLLLF Trigger: AAAAAGGAGAAGCCAAATTCTGGGGGTACCAAGTCCGACTCTGCATCTGACTCCCAGGAGATTAAGATTCAGCAGTCTTCTAAACACAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 |
||
| CDS-3UTR CAA 90 bp | AAATGTGACAGTTGGACATGTATAATGAGAAATCTGTCCTGTGTCCAGCACTGGCAGACAGCAGCTCCATaGCTCTCTGGATGTCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: KCDSWTCIMRNLSCVQHWQTAAP*LSGCLV Trigger: TACAAGACATCCAGAGAGCAATGGAGCTGCTGTCTG...CCAGTGCTGGACACAGGACAGATTTCTCATTATACATGTCCAACTGTCACATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
||
| CDS-3UTR CAA 90 bp | CAGCCTACAGTCACATTTGGTGACTCCTTTCTAGTAGGGAAGGAAATGCCATGTTGGCGGATATTGTCTTaGTCTGGTTCAATTGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: QPTVTFGDSFLVGKEMPCWRILS*SGSIAP Trigger: TGGTGCAATTGAACCAGACAAAGACAATATCCGCCA...ACATGGCATTTCCTTCCCTACTAGAAAGGAGTCACCAAATGTGACTGTAGGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
||
| CDS-3UTR CAA 90 bp | AATGTACTGATTTGGCTACTATGCTTATGGGACAGACCTGTGTATTTGCTTATGTCGGTCTCCTCCTCATaGTCTCCGTCTATTCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: NVLIWLLCLWDRPVYLLMSVSSS*SPSIPH Trigger: GTGCGGAATAGACGGAGACAATGAGGAGGAGACCGA...CATAAGCAAATACACAGGTCTGTCCCATAAGCATAGTAGCCAAATCAGTACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CAA 90 bp | GATGCTGCCATTTCTGTTTGGATCACAGAGACAGTCCCACTTTTCTCTTTGCAGTGTCTTTTGGTTCCATaGGTCTCAAACCTGAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: DAAISVWITETVPLFSLQCLLVP*VSNLKS Trigger: AGACTTCAGGTTTGAGACCAATGGAACCAAAAGACA...CTGCAAAGAGAAAAGTGGGACTGTCTCTGTGATCCAAACAGAAATGGCAGCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CAA 90 bp | GGCTACTATGCTTATGGGACAGACCTGTGTATTTGCTTATGGAATAATAAATGTTCGGTCTCCTCCTCATaGTCTCCGTCTATTCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GYYAYGTDLCICLWNNKCSVSSS*SPSIPH Trigger: GTGCGGAATAGACGGAGACAATGAGGAGGAGACCGA...ACATTTATTATTCCATAAGCAAATACACAGGTCTGTCCCATAAGCATAGTAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CAA 90 bp | TTTCTTAACATGATGCTGCCATTTCTGTTTGGATCACAGAGACAGTCCCACTTTATGACTTCATTCAATTaGGGCACTGGCTGTGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLNMMLPFLFGSQRQSHFMTSFN*GTGCVS Trigger: GGACACACAGCCAGTGCCCAAATTGAATGAAGTCAT...AAAGTGGGACTGTCTCTGTGATCCAAACAGAAATGGCAGCATCATGTTAAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CAA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAACAGACAGCAGCTCCATaGCTCTCTGGATGTCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: TQLVLLFFFGMTFPGITKQTAAP*LSGCLV Trigger: TACAAGACATCCAGAGAGCAATGGAGCTGCTGTCTG...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR CAA 90 bp | CATTTAATAAACAGAAAAGCAGCAGTGACTCTCCTAACAGCAAAGGTTTTCTTACAGACAGCAGCTCCATaGCTCTCTGGATGTCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: HLINRKAAVTLLTAKVFLQTAAP*LSGCLV Trigger: TACAAGACATCCAGAGAGCAATGGAGCTGCTGTCTG...TAAGAAAACCTTTGCTGTTAGGAGAGTCACTGCTGCTTTTCTGTTTATTAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CAA 90 bp | GATTTGGCTACTATGCTTATGGGACAGACCTGTGTATTTGCTTATGGAATAATACTGGGGCTACCCGTTTaGATCTCAGTTTCTTATGGA | + |
|
Preference number: 5 (lower is better) Translates to: DLATMLMGQTCVFAYGIILGLPV*ISVSYG Trigger: TCCATAAGAAACTGAGATCAAAACGGGTAGCCCCAG...TATTATTCCATAAGCAAATACACAGGTCTGTCCCATAAGCATAGTAGCCAAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CAA 90 bp | GGACAGACCTGTGTATTTGCTTATGGAATAATAAATGTGCTAAGTCACTGGTACAGCTCTCGGACTGCTTaGATGTCTTTTGGTTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: GQTCVFAYGIINVLSHWYSSRTA*MSFGSI Trigger: AATGGAACCAAAAGACATCAAAGCAGTCCGAGAGCT...GTACCAGTGACTTAGCACATTTATTATTCCATAAGCAAATACACAGGTCTGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CAA 90 bp | ATGGGACAGACCTGTGTATTTGCTTATGGAATAATAAATGTGCTAAGTCACTGGAGCTCTCGGACTGCTTaGATGTCTTTTGGTTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: MGQTCVFAYGIINVLSHWSSRTA*MSFGSI Trigger: AATGGAACCAAAAGACATCAAAGCAGTCCGAGAGCT...CCAGTGACTTAGCACATTTATTATTCCATAAGCAAATACACAGGTCTGTCCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS TCA 90 bp | CACTCTTCTGGTTATTTCTCGAATCAACACTGGGGCTACCCGTTTTaGTCTCAGTTTCTTATGGACACAAAGAAAGTTGATTTCTACCAT | + |
|
Preference number: 5 (lower is better) Translates to: HSSGYFSNQHWGYPF*SQFLMDTKKVDFYH Trigger: ATGGTAGAAATCAACTTTCTTTGTGTCCATAAGAAACTGAGATCAAAACGGGTAGCCCCAGTGTTGATTCGAGAAATAACCAGAAGAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR CAA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAAACTGGTATCTGCGTTTaGTGGCCTCATCAATGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TQLVLLFFFGMTFPGITKTGICV*WPHQCS Trigger: GGAACATTGATGAGGCCACAAAACGCAGATACCAGT...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR CAA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAAATGACTTCATTCAATTaGGGCACTGGCTGTGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TQLVLLFFFGMTFPGITKMTSFN*GTGCVS Trigger: GGACACACAGCCAGTGCCCAAATTGAATGAAGTCAT...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR CAA 90 bp | CTCCTTAAGTATCTACCACATGTCAATTCTATAAACATTCCAGTGGCATCATGTGTCCCACATAAAACCTaGCGGCAAAGAATATGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLKYLPHVNSINIPVASCVPHKT*RQRIWF Trigger: GAACCATATTCTTTGCCGCAAGGTTTTATGTGGGAC...ACATGATGCCACTGGAATGTTTATAGAATTGACATGTGGTAGATACTTAAGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CAA 90 bp | GGCTACTATGCTTATGGGACAGACCTGTGTATTTGCTTATGGAATAATAAATGTGTCCCACATAAAACCTaGCGGCAAAGAATATGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GYYAYGTDLCICLWNNKCVPHKT*RQRIWF Trigger: GAACCATATTCTTTGCCGCAAGGTTTTATGTGGGAC...ACATTTATTATTCCATAAGCAAATACACAGGTCTGTCCCATAAGCATAGTAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CAA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAACTGGGGCTACCCGTTTaGATCTCAGTTTCTTATGGA | + |
|
Preference number: 5 (lower is better) Translates to: TQLVLLFFFGMTFPGITKLGLPV*ISVSYG Trigger: TCCATAAGAAACTGAGATCAAAACGGGTAGCCCCAG...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR CAA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAATGGCGGATATTGTCTTaGTCTGGTTCAATTGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: TQLVLLFFFGMTFPGITKWRILS*SGSIAP Trigger: TGGTGCAATTGAACCAGACAAAGACAATATCCGCCA...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR CAA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAAGTCCCACATAAAACCTaGCGGCAAAGAATATGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TQLVLLFFFGMTFPGITKVPHKT*RQRIWF Trigger: GAACCATATTCTTTGCCGCAAGGTTTTATGTGGGAC...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
||
| CDS-3UTR CAA 90 bp | CTCCTTAAGTATCTACCACATGTCAATTCTATAAACATTCCAGTGGCATCATGTTGTCTTTTGGTTCCATaGGTCTCAAACCTGAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLKYLPHVNSINIPVASCCLLVP*VSNLKS Trigger: AGACTTCAGGTTTGAGACCAATGGAACCAAAAGACA...ACATGATGCCACTGGAATGTTTATAGAATTGACATGTGGTAGATACTTAAGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
||
| CDS-3UTR CAA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAAAGCTCTCGGACTGCTTaGATGTCTTTTGGTTCCATT | + |
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Preference number: 5 (lower is better) Translates to: TQLVLLFFFGMTFPGITKSSRTA*MSFGSI Trigger: AATGGAACCAAAAGACATCAAAGCAGTCCGAGAGCT...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
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| CDS-3UTR CAA 90 bp | ACTCAACTTGTGCTTTTATTCTTCTTTGGAATGACATTTCCAGGCATCACTAAATGTCTTTTGGTTCCATaGGTCTCAAACCTGAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: TQLVLLFFFGMTFPGITKCLLVP*VSNLKS Trigger: AGACTTCAGGTTTGAGACCAATGGAACCAAAAGACA...TTTAGTGATGCCTGGAAATGTCATTCCAAAGAAGAATAAAAGCACAAGTTGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
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| CDS CCA 72 bp | TCCTCCTCATTGTCTCCGTCTATTCCGCACGTGTCCTaGTCGTCCAGCTCTAGGCTCTGCTGGCTGGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: SSSLSPSIPHVS*SSSSRLCWLAA Trigger: TGCGGCCAGCCAGCAGAGCCTAGAGCTGGACGACCAGGACACGTGCGGAATAGACGGAGACAATGAGGAGGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
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| CDS CAA 72 bp | CCAGGGCTTCCTTTGGCGTGTTCGGTCTCCTCCTCATaGTCTCCGTCTATTCCGCACGTGTCCTGGTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: PGLPLACSVSSS*SPSIPHVSWSS Trigger: GGACGACCAGGACACGTGCGGAATAGACGGAGACAATGAGGAGGAGACCGAACACGCCAAAGGAAGCCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
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| CDS CAA 90 bp | AAATCCCCTCCAGGGCTTCCTTTGGCGTGTTCGGTCTCCTCCTCATaGTCTCCGTCTATTCCGCACGTGTCCTGGTCGTCCAGCTCTAGG | + |
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Preference number: 6 (lower is better) Translates to: KSPPGLPLACSVSSS*SPSIPHVSWSSSSR Trigger: CCTAGAGCTGGACGACCAGGACACGTGCGGAATAGACGGAGACAATGAGGAGGAGACCGAACACGCCAAAGGAAGCCCTGGAGGGGATTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000102989.10 |
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| CDS TCA 72 bp | GCTTCCCACTGGGGTTCTCCACTACAAACGTGTCAATaGTGTGCTCCCTGGGCAGGAACCAGTGGGCCACTT | + |
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Preference number: 6 (lower is better) Translates to: ASHWGSPLQTCQ*CAPWAGTSGPL Trigger: AAGTGGCCCACTGGTTCCTGCCCAGGGAGCACATCATTGACACGTTTGTAGTGGAGAACCCCAGTGGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
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| CDS CCA 72 bp | AACGTGTCAATGATGTGCTCCCTGGGCAGGAACCAGTaGGCCACTTCTGCGTCATCCATCACTGGAGCTAGA | + |
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Preference number: 6 (lower is better) Translates to: NVSMMCSLGRNQ*ATSASSITGAR Trigger: TCTAGCTCCAGTGATGGATGACGCAGAAGTGGCCCACTGGTTCCTGCCCAGGGAGCACATCATTGACACGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
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| CDS CCA 72 bp | CTGGCTGTGTGTCCCAAAACTGGTATCTGCGTTTTGTaGCCTCATCAATGTTCCTGGCTGGGCCTTGGCATG | + |
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Preference number: 6 (lower is better) Translates to: LAVCPKTGICVL*PHQCSWLGLGM Trigger: CATGCCAAGGCCCAGCCAGGAACATTGATGAGGCCACAAAACGCAGATACCAGTTTTGGGACACACAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
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| CDS TCA 72 bp | ACCTTCCATAGTATCACCACCCATGGCTGCTCCTGCTaGAATCTGCTGCCAGATGGCGTTGTGTTTAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: TFHSITTHGCSC*NLLPDGVVFRR Trigger: TCTTCTAAACACAACGCCATCTGGCAGCAGATTTCAGCAGGAGCAGCCATGGGTGGTGATACTATGGAAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081932.13 |
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| CDS TCA 72 bp | ATCTGCTGCCAGATGGCGTTGTGTTTAGAAGACTGCTaGATCTTAATCTCCTGGGAGTCAGATGCAGAGTCG | + |
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Preference number: 6 (lower is better) Translates to: ICCQMALCLEDC*ILISWESDAES Trigger: CGACTCTGCATCTGACTCCCAGGAGATTAAGATTCAGCAGTCTTCTAAACACAACGCCATCTGGCAGCAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 |
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| CDS CCA 72 bp | TCATTCAATTTGGGCACTGGCTGTGTGTCCCAAAACTaGTATCTGCGTTTTGTGGCCTCATCAATGTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: SFNLGTGCVSQN*YLRFVASSMFL Trigger: CAGGAACATTGATGAGGCCACAAAACGCAGATACCAGTTTTGGGACACACAGCCAGTGCCCAAATTGAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
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| CDS TCA 72 bp | TTCATCGTTCTCTGTAAGGTCATGTTTCTACTCAGGTaGGAAAATTTCACTTCCACCAGTTTCCTGGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: FIVLCKVMFLLR*ENFTSTSFLGF Trigger: AAACCCCAGGAAACTGGTGGAAGTGAAATTTTCTCACCTGAGTAGAAACATGACCTTACAGAGAACGATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
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| CDS TCA 72 bp | GGTTATTTCTCGAATCAACACTGGGGCTACCCGTTTTaGTCTCAGTTTCTTATGGACACAAAGAAAGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: GYFSNQHWGYPF*SQFLMDTKKVD Trigger: ATCAACTTTCTTTGTGTCCATAAGAAACTGAGATCAAAACGGGTAGCCCCAGTGTTGATTCGAGAAATAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081932.13 ENSMUST00000091504.5 ENSMUST00000102989.10 |
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