Pregenerated sensors for NMRK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004939Ensembl transcript IDs: ENSMUST00000005069.8
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAAAATCTCACAGTGTCCGTGCCCACTGCACGTGTGTGGGGACATaGCCTCCTATGTACAGATTTCCTATAGGCGAAGAGCCACTGCGT | + |
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Preference number: 1 (lower is better) Translates to: RKSHSVRAHCTCVGT*PPMYRFPIGEEPLR Trigger: ACGCAGTGGCTCTTCGCCTATAGGAAATCTGTACATAGGAGGGCATGTCCCCACACACGTGCAGTGGGCACGGACACTGTGAGATTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| 3UTR GCA 90 bp | TCAGGGGGTGTATGGTTGTGTGTGAGAGGAGACAGGTATGCTGGTTaGAGGACAGGCAGCATGTGTTGTGTGTGTGTATTTAGGAGATTC | + |
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Preference number: 1 (lower is better) Translates to: SGGVWLCVRGDRYAG*RTGSMCCVCVFRRF Trigger: GAATCTCCTAAATACACACACACAACACATGCTGCCTGTCCTGCAACCAGCATACCTGTCTCCTCTCACACACAACCATACACCCCCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| 3UTR CCA 90 bp | ATTTTTCTATATGTAATTGGGATTCTGTCATTGCAATTCCACAGATaGCCATTAGGTGTCACCCTCAGGCCAAAGAATAAAATCTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: IFLYVIGILSLQFHR*PLGVTLRPKNKISE Trigger: TTCAGAGATTTTATTCTTTGGCCTGAGGGTGACACCTAATGGCCATCTGTGGAATTGCAATGACAGAATCCCAATTACATATAGAAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCACATCTACATTCCAGCACCACCGAAATGTTCTGCTCAGAGCCTCAGTTTTCGAGCTGGGCAATGGTaGCACACGCCTTTAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: LHIYIPAPPKCSAQSLSFRAGQW*HTPLIP Trigger: TGGGATTAAAGGCGTGTGCCACCATTGCCCAGCTCG...AAAACTGAGGCTCTGAGCAGAACATTTCGGTGGTGCTGGAATGTAGATGTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCTGAAGCCGACTCTCCTCCACATCTACATTCCAGCACCACCGAAATGTTCTACGTGTGTGGGGACATaGCCTCCTATGTACAGATTT | + |
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Preference number: 2 (lower is better) Translates to: SLKPTLLHIYIPAPPKCSTCVGT*PPMYRF Trigger: AAATCTGTACATAGGAGGGCATGTCCCCACACACGT...AGAACATTTCGGTGGTGCTGGAATGTAGATGTGGAGGAGAGTCGGCTTCAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| 3UTR-3UTR TCA 90 bp | GACTTGTTATTTAGCAGAACACTACTACTCAGTCACTCGTCCATCCATCTGTCCCCTTACCCAAGTTCATaGGGAATGTCTCCTTTAGGG | + |
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Preference number: 2 (lower is better) Translates to: DLLFSRTLLLSHSSIHLSPYPSS*GMSPLG Trigger: CCCTAAAGGAGACATTCCTCATGAACTTGGGTAAGG...GGACAGATGGATGGACGAGTGACTGAGTAGTAGTGTTCTGCTAAATAACAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| 3UTR-3UTR GCA 90 bp | TCTATATGTAATTGGGATTCTGTCATTGCAATTCCACAGATGGCCATTAGGTGTGAGAGGAGACAGGTATaGTGGTTGCAGGACAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SICNWDSVIAIPQMAIRCERRQV*WLQDRQ Trigger: CTGCCTGTCCTGCAACCAGCATACCTGTCTCCTCTC...ACACCTAATGGCCATCTGTGGAATTGCAATGACAGAATCCCAATTACATATAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| 3UTR-3UTR GCA 90 bp | TCTATATGTAATTGGGATTCTGTCATTGCAATTCCACAGATGGCCATTAGGTGTGACAGGTATGCTGGTTaGAGGACAGGCAGCATGTGT | + |
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Preference number: 2 (lower is better) Translates to: SICNWDSVIAIPQMAIRCDRYAG*RTGSMC Trigger: ACACATGCTGCCTGTCCTGCAACCAGCATACCTGTC...ACACCTAATGGCCATCTGTGGAATTGCAATGACAGAATCCCAATTACATATAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCTATATGTAATTGGGATTCTGTCATTGCAATTCCACAGATGGCCATTAGGTGGTTCAGGGGGTGTATaGTTGTGTGTGAGAGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: FLYVIGILSLQFHRWPLGGSGGV*LCVRGD Trigger: GTCTCCTCTCACACACAACCATACACCCCCTGAACC...ACCTAATGGCCATCTGTGGAATTGCAATGACAGAATCCCAATTACATATAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCTATATGTAATTGGGATTCTGTCATTGCAATTCCACAGATGGCCATTAGGTTCTGAGTACCAAAGGTaGCCTCTCTGTGCCTGTCTA | + |
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Preference number: 2 (lower is better) Translates to: FLYVIGILSLQFHRWPLGSEYQR*PLCACL Trigger: TAGACAGGCACAGAGAGGTCACCTTTGGTACTCAGA...ACCTAATGGCCATCTGTGGAATTGCAATGACAGAATCCCAATTACATATAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| 3UTR CAA 90 bp | CTCATCTACTATAGCATTTTTCTATATGTAATTGGGATTCTGTCATaGCAATTCCACAGATGGCCATTAGGTGTCACCCTCAGGCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LIYYSIFLYVIGILS*QFHRWPLGVTLRPK Trigger: CTTTGGCCTGAGGGTGACACCTAATGGCCATCTGTGGAATTGCAATGACAGAATCCCAATTACATATAGAAAAATGCTATAGTAGATGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGCAACAATTTTATTTTCAAAGTCTTATGTAGACAAGGAGGCTTCAGACTTGAGAGGGAGGCTCAGATaGGAGAAGAAAGATCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: QATILFSKSYVDKEASDLRGRLR*EKKDLR Trigger: CCTGAGATCTTTCTTCTCTCATCTGAGCCTCCCTCT...CAAGTCTGAAGCCTCCTTGTCTACATAAGACTTTGAAAATAAAATTGTTGCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| 3UTR-3UTR TCA 90 bp | TCTATATGTAATTGGGATTCTGTCATTGCAATTCCACAGATGGCCATTAGGTGTAATAACCCTATAGAGTaGGACTTGGCTTTGGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: SICNWDSVIAIPQMAIRCNNPIE*DLALVS Trigger: GGAAACCAAAGCCAAGTCTCACTCTATAGGGTTATT...ACACCTAATGGCCATCTGTGGAATTGCAATGACAGAATCCCAATTACATATAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| 3UTR GCA 72 bp | CACAGTGTCCGTGCCCACTGCACGTGTGTGGGGACATaGCCTCCTATGTACAGATTTCCTATAGGCGAAGAG | + |
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Preference number: 3 (lower is better) Translates to: HSVRAHCTCVGT*PPMYRFPIGEE Trigger: CTCTTCGCCTATAGGAAATCTGTACATAGGAGGGCATGTCCCCACACACGTGCAGTGGGCACGGACACTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| 3UTR GCA 72 bp | AGGGGGTGTATGGTTGTGTGTGAGAGGAGACAGGTATaGTGGTTGCAGGACAGGCAGCATGTGTTGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: RGCMVVCERRQV*WLQDRQHVLCV Trigger: CACACACAACACATGCTGCCTGTCCTGCAACCAGCATACCTGTCTCCTCTCACACACAACCATACACCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| 3UTR CCA 72 bp | GGGTGTATGGTTGTGTGTGAGAGGAGACAGGTATGCTaGTTGCAGGACAGGCAGCATGTGTTGTGTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: GCMVVCERRQVC*LQDRQHVLCVC Trigger: ACACACACACAACACATGCTGCCTGTCCTGCAACCAGCATACCTGTCTCCTCTCACACACAACCATACACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| 3UTR-3UTR CAA 90 bp | CTCCACATCTACATTCCAGCACCACCGAAATGTTCTGCTCAGAGCCTCAGTTTTAGACAGGTATGCTGGTaGCAGGACAGGCAGCATGTG | + |
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Preference number: 3 (lower is better) Translates to: LHIYIPAPPKCSAQSLSFRQVCW*QDRQHV Trigger: CACATGCTGCCTGTCCTGCAACCAGCATACCTGTCT...AAAACTGAGGCTCTGAGCAGAACATTTCGGTGGTGCTGGAATGTAGATGTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| 3UTR-3UTR CAA 90 bp | TTATTTAGCAGAACACTACTACTCAGTCACTCGTCCATCCATCTGTCCGTCCGTTCAGGGGGTGTATGGTaGTGTGTGAGAGGAGACAGG | + |
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Preference number: 3 (lower is better) Translates to: LFSRTLLLSHSSIHLSVRSGGVW*CVRGDR Trigger: CCTGTCTCCTCTCACACACAACCATACACCCCCTGA...ACGGACGGACAGATGGATGGACGAGTGACTGAGTAGTAGTGTTCTGCTAAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| 3UTR TCA 72 bp | GCTTTGGTTTCCGAAAGAAGTAGAGGGAGGCTCAGATaGGAGAAGAAAGATCTCAGGAATCCCTCGGGAACT | + |
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Preference number: 3 (lower is better) Translates to: ALVSERSRGRLR*EKKDLRNPSGT Trigger: AGTTCCCGAGGGATTCCTGAGATCTTTCTTCTCTCATCTGAGCCTCCCTCTACTTCTTTCGGAAACCAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| 3UTR TCA 72 bp | ATTAGGGTAGATGTTGTTTCTCCTTACCCAAGTTCATaGGGAATGTCTCCTTTAGGGAAACTGAGGCACATC | + |
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Preference number: 3 (lower is better) Translates to: IRVDVVSPYPSS*GMSPLGKLRHI Trigger: GATGTGCCTCAGTTTCCCTAAAGGAGACATTCCTCATGAACTTGGGTAAGGAGAAACAACATCTACCCTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS-3UTR TCA 90 bp | TCTCTGAAGCCGACTCTCCTCCACATCTACATTCCAGCACCACCGAAATGTTCTAGGCCTGCACCGTGCTaGGCATGGTCTCCATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SLKPTLLHIYIPAPPKCSRPAPC*AWSPCP Trigger: TGGACATGGAGACCATGCTCAGCACGGTGCAGGCCT...AGAACATTTCGGTGGTGCTGGAATGTAGATGTGGAGGAGAGTCGGCTTCAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS-3UTR CCA 90 bp | TCTCTGAAGCCGACTCTCCTCCACATCTACATTCCAGCACCACCGAAATGTTCTTCGAGGAGGAGTACGTaGGTGTCCGAGGCACCTGAC | + |
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Preference number: 4 (lower is better) Translates to: SLKPTLLHIYIPAPPKCSSRRST*VSEAPD Trigger: GTCAGGTGCCTCGGACACCCACGTACTCCTCCTCGA...AGAACATTTCGGTGGTGCTGGAATGTAGATGTGGAGGAGAGTCGGCTTCAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS-3UTR TCA 90 bp | GACTTGTTATTTAGCAGAACACTACTACTCAGTCACTCGTCCATCCATCTGTCCAGTTGGGCAGCGCCTTaGGGAGGCTGTTGGTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: DLLFSRTLLLSHSSIHLSSWAAP*GGCWSG Trigger: CCCTGACCAACAGCCTCCTCAAGGCGCTGCCCAACT...GGACAGATGGATGGACGAGTGACTGAGTAGTAGTGTTCTGCTAAATAACAAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS-3UTR CCA 90 bp | CTCCACATCTACATTCCAGCACCACCGAAATGTTCTGCTCAGAGCCTCAGTTTTGGCTGTTGGTCAGGGTaGTCTTCCCACCGTTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LHIYIPAPPKCSAQSLSFGCWSG*SSHRWS Trigger: TGACCAACGGTGGGAAGACCACCCTGACCAACAGCC...AAAACTGAGGCTCTGAGCAGAACATTTCGGTGGTGCTGGAATGTAGATGTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS-3UTR GCA 90 bp | GACTTGTTATTTAGCAGAACACTACTACTCAGTCACTCGTCCATCCATCTGTCCTCCTTCACCCAGGCCTaGACCGTGCTGAGCATGGTC | + |
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Preference number: 4 (lower is better) Translates to: DLLFSRTLLLSHSSIHLSSFTQA*TVLSMV Trigger: GACCATGCTCAGCACGGTGCAGGCCTGGGTGAAGGA...GGACAGATGGATGGACGAGTGACTGAGTAGTAGTGTTCTGCTAAATAACAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS-3UTR GCA 90 bp | ATGTCTCCTTTAGGGAAACTGAGGCACATCAACAAGGTTACCCACAGAGGCCACGACGCCATGAGCGCGTaGAAACTTGTGTGGATCCTT | + |
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Preference number: 4 (lower is better) Translates to: MSPLGKLRHINKVTHRGHDAMSA*KLVWIL Trigger: AAGGATCCACACAAGTTTGCACGCGCTCATGGCGTC...GTGGCCTCTGTGGGTAACCTTGTTGATGTGCCTCAGTTTCCCTAAAGGAGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS-3UTR TCA 90 bp | ACATCTACATTCCAGCACCACCGAAATGTTCTGCTCAGAGCCTCAGTTTTCCCTTTTGGTCCTGGGGCTTaGAGAAGTCATCCTGATGGA | + |
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Preference number: 4 (lower is better) Translates to: TSTFQHHRNVLLRASVFPFGPGA*RSHPDG Trigger: TCCATCAGGATGACTTCTTCAAGCCCCAGGACCAAA...AGGGAAAACTGAGGCTCTGAGCAGAACATTTCGGTGGTGCTGGAATGTAGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| 3UTR CAA 72 bp | TGTATGGTTGTGTGTGAGAGGAGACAGGTATGCTGGTaGCAGGACAGGCAGCATGTGTTGTGTGTGTGTATT | + |
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Preference number: 4 (lower is better) Translates to: CMVVCERRQVCW*QDRQHVLCVCI Trigger: AATACACACACACAACACATGCTGCCTGTCCTGCAACCAGCATACCTGTCTCCTCTCACACACAACCATACA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS-3UTR TCA 90 bp | CTCAGGCCAAAGAATAAAATCTCTGAAGCCGACTCTCCTCCACATCTACATTCCTTGAAGAAGTCATCCTaGTGGATCACGCAGCAGTTG | + |
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Preference number: 4 (lower is better) Translates to: LRPKNKISEADSPPHLHSLKKSS*WITQQL Trigger: CAACTGCTGCGTGATCCATCAGGATGACTTCTTCAA...GGAATGTAGATGTGGAGGAGAGTCGGCTTCAGAGATTTTATTCTTTGGCCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS-3UTR CCA 90 bp | CTCAGGCCAAAGAATAAAATCTCTGAAGCCGACTCTCCTCCACATCTACATTCCTATACTTCTGGTACATaGGCCACACGTGACCATCAA | + |
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Preference number: 4 (lower is better) Translates to: LRPKNKISEADSPPHLHSYTSGT*ATRDHQ Trigger: TTGATGGTCACGTGTGGCCCATGTACCAGAAGTATA...GGAATGTAGATGTGGAGGAGAGTCGGCTTCAGAGATTTTATTCTTTGGCCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS-3UTR TCA 90 bp | TTTCTATATGTAATTGGGATTCTGTCATTGCAATTCCACAGATGGCCATTAGGTTACATGGGCCACACGTaGCCATCAAACAGGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: FLYVIGILSLQFHRWPLGYMGHT*PSNRPG Trigger: TCCTGGCCTGTTTGATGGTCACGTGTGGCCCATGTA...ACCTAATGGCCATCTGTGGAATTGCAATGACAGAATCCCAATTACATATAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS-3UTR CCA 90 bp | TTTCTATATGTAATTGGGATTCTGTCATTGCAATTCCACAGATGGCCATTAGGTTGGTCTTCCCACCGTTaGTCACCCCTCCAATGCCTA | + |
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Preference number: 4 (lower is better) Translates to: FLYVIGILSLQFHRWPLGWSSHR*SPLQCL Trigger: TAGGCATTGGAGGGGTGACCAACGGTGGGAAGACCA...ACCTAATGGCCATCTGTGGAATTGCAATGACAGAATCCCAATTACATATAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS-3UTR CCA 90 bp | TTTCTATATGTAATTGGGATTCTGTCATTGCAATTCCACAGATGGCCATTAGGTTCTCCGACTGCTATTTaGTCCTGGGGCTTGAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: FLYVIGILSLQFHRWPLGSPTAI*SWGLKK Trigger: CTTCTTCAAGCCCCAGGACCAAATAGCAGTCGGAGA...ACCTAATGGCCATCTGTGGAATTGCAATGACAGAATCCCAATTACATATAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| 3UTR CAA 72 bp | TTTTCAAAGTCTTATGTAGACAAGGAGGCTTCAGACTaGTTATTTAGCAGAACACTACTACTCAGTCACTCG | + |
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Preference number: 4 (lower is better) Translates to: FSKSYVDKEASD*LFSRTLLLSHS Trigger: CGAGTGACTGAGTAGTAGTGTTCTGCTAAATAACAAGTCTGAAGCCTCCTTGTCTACATAAGACTTTGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS TCA 90 bp | CCTCGAGGAGGAGTACGTGGGTGTCCGAGGCACCTGACTGAAGGCTaGCGCCATGAGCGCGTGCAAACTTGTGTGGATCCTTCACCCAGG | + |
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Preference number: 5 (lower is better) Translates to: PRGGVRGCPRHLTEG*RHERVQTCVDPSPR Trigger: CCTGGGTGAAGGATCCACACAAGTTTGCACGCGCTCATGGCGTCAGCCTTCAGTCAGGTGCCTCGGACACCCACGTACTCCTCCTCGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS TCA 90 bp | CGCGTGCAAACTTGTGTGGATCCTTCACCCAGGCCTGCACCGTGCTaGGCATGGTCTCCATGTCCAGGGACTCAAGCACGTCCCACTGTT | + |
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Preference number: 5 (lower is better) Translates to: RVQTCVDPSPRPAPC*AWSPCPGTQARPTV Trigger: AACAGTGGGACGTGCTTGAGTCCCTGGACATGGAGACCATGCTCAGCACGGTGCAGGCCTGGGTGAAGGATCCACACAAGTTTGCACGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS-3UTR CAA 90 bp | GAAACTGAGGCACATCAACAAGGTTACCCACAGAGGCCACCAGGTGCCAGTAAATGGATCACGCAGCAGTaGGGCAGCGCCTTGAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: ETEAHQQGYPQRPPGASKWITQQ*GSALRR Trigger: CCTCCTCAAGGCGCTGCCCAACTGCTGCGTGATCCA...TTTACTGGCACCTGGTGGCCTCTGTGGGTAACCTTGTTGATGTGCCTCAGTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS GCA 90 bp | CAGGAGGATCAGGGACCATGTAAGTACGGCTTCTTCTCCTCCGCTTaGATTCCTCATACGGCACGGTCAGGAAGTAGCGTTGGCTGTACA | + |
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Preference number: 5 (lower is better) Translates to: QEDQGPCKYGFFSSA*IPHTARSGSSVGCT Trigger: TGTACAGCCAACGCTACTTCCTGACCGTGCCGTATGAGGAATGCAAGCGGAGGAGAAGAAGCCGTACTTACATGGTCCCTGATCCTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS GCA 90 bp | GAATATCCTCCAGAACTTGATGGAAGAGTCCCTCCGGGGACTTCATaGCATCTAAATAGACCACTTCCACCCCGTCCTGCTCCATCTCCC | + |
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Preference number: 5 (lower is better) Translates to: EYPPELDGRVPPGTS*HLNRPLPPRPAPSP Trigger: GGGAGATGGAGCAGGACGGGGTGGAAGTGGTCTATTTAGATGGCATGAAGTCCCCGGAGGGACTCTTCCATCAAGTTCTGGAGGATATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS-3UTR CAA 90 bp | TTATTTAGCAGAACACTACTACTCAGTCACTCGTCCATCCATCTGTCCGTCCGTCAGTTGGGCAGCGCCTaGAGGAGGCTGTTGGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: LFSRTLLLSHSSIHLSVRQLGSA*RRLLVR Trigger: CCTGACCAACAGCCTCCTCAAGGCGCTGCCCAACTG...ACGGACGGACAGATGGATGGACGAGTGACTGAGTAGTAGTGTTCTGCTAAATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS-3UTR CAA 90 bp | TATAGGCGAAGAGCCACTGCGTCCAGTCAGAACATCTCAGGCCCTGCTGTCCAGGTTGAGCAGTCTGTTTaGAATATCCTCCAGAACTTG | + |
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Preference number: 5 (lower is better) Translates to: YRRRATASSQNISGPAVQVEQSV*NILQNL Trigger: CAAGTTCTGGAGGATATTCAAAACAGACTGCTCAAC...CTGGACAGCAGGGCCTGAGATGTTCTGACTGGACGCAGTGGCTCTTCGCCTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS-3UTR CAA 90 bp | GACTTGTTATTTAGCAGAACACTACTACTCAGTCACTCGTCCATCCATCTGTCCGGTCAGGAAGTAGCGTaGGCTGTACAAGTCCACCAG | + |
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Preference number: 5 (lower is better) Translates to: DLLFSRTLLLSHSSIHLSGQEVA*AVQVHQ Trigger: CTGGTGGACTTGTACAGCCAACGCTACTTCCTGACC...GGACAGATGGATGGACGAGTGACTGAGTAGTAGTGTTCTGCTAAATAACAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS-3UTR CAA 90 bp | TTTCTATATGTAATTGGGATTCTGTCATTGCAATTCCACAGATGGCCATTAGGTGCCTTGAGGAGGCTGTaGGTCAGGGTGGTCTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: FLYVIGILSLQFHRWPLGALRRL*VRVVFP Trigger: TGGGAAGACCACCCTGACCAACAGCCTCCTCAAGGC...ACCTAATGGCCATCTGTGGAATTGCAATGACAGAATCCCAATTACATATAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS CAA 72 bp | ATCACGCAGCAGTTGGGCAGCGCCTTGAGGAGGCTGTaGGTCAGGGTGGTCTTCCCACCGTTGGTCACCCCT | + |
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Preference number: 6 (lower is better) Translates to: ITQQLGSALRRL*VRVVFPPLVTP Trigger: AGGGGTGACCAACGGTGGGAAGACCACCCTGACCAACAGCCTCCTCAAGGCGCTGCCCAACTGCTGCGTGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS TCA 72 bp | CATCCTGATGGATCACGCAGCAGTTGGGCAGCGCCTTaGGGAGGCTGTTGGTCAGGGTGGTCTTCCCACCGT | + |
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Preference number: 6 (lower is better) Translates to: HPDGSRSSWAAP*GGCWSGWSSHR Trigger: ACGGTGGGAAGACCACCCTGACCAACAGCCTCCTCAAGGCGCTGCCCAACTGCTGCGTGATCCATCAGGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS TCA 72 bp | ACCCTCGAGGAGGAGTACGTGGGTGTCCGAGGCACCTaGCTGAAGGCTGACGCCATGAGCGCGTGCAAACTT | + |
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Preference number: 6 (lower is better) Translates to: TLEEEYVGVRGT*LKADAMSACKL Trigger: AAGTTTGCACGCGCTCATGGCGTCAGCCTTCAGTCAGGTGCCTCGGACACCCACGTACTCCTCCTCGAGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS TCA 72 bp | GGAGTACGTGGGTGTCCGAGGCACCTGACTGAAGGCTaGCGCCATGAGCGCGTGCAAACTTGTGTGGATCCT | + |
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Preference number: 6 (lower is better) Translates to: GVRGCPRHLTEG*RHERVQTCVDP Trigger: AGGATCCACACAAGTTTGCACGCGCTCATGGCGTCAGCCTTCAGTCAGGTGCCTCGGACACCCACGTACTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS CCA 72 bp | CTGAAGGCTGACGCCATGAGCGCGTGCAAACTTGTGTaGATCCTTCACCCAGGCCTGCACCGTGCTGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: LKADAMSACKLV*ILHPGLHRAEH Trigger: ATGCTCAGCACGGTGCAGGCCTGGGTGAAGGATCCACACAAGTTTGCACGCGCTCATGGCGTCAGCCTTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS TCA 72 bp | ACTTGTGTGGATCCTTCACCCAGGCCTGCACCGTGCTaGGCATGGTCTCCATGTCCAGGGACTCAAGCACGT | + |
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Preference number: 6 (lower is better) Translates to: TCVDPSPRPAPC*AWSPCPGTQAR Trigger: ACGTGCTTGAGTCCCTGGACATGGAGACCATGCTCAGCACGGTGCAGGCCTGGGTGAAGGATCCACACAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS TCA 72 bp | ACTGCTATTTGGTCCTGGGGCTTGAAGAAGTCATCCTaGTGGATCACGCAGCAGTTGGGCAGCGCCTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: TAIWSWGLKKSS*WITQQLGSALR Trigger: CCTCAAGGCGCTGCCCAACTGCTGCGTGATCCATCAGGATGACTTCTTCAAGCCCCAGGACCAAATAGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS CCA 72 bp | CGTCCTGCTCCATCTCCCGTCTATACTTCTGGTACATaGGCCACACGTGACCATCAAACAGGCCAGGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: RPAPSPVYTSGT*ATRDHQTGQED Trigger: ATCCTCCTGGCCTGTTTGATGGTCACGTGTGGCCCATGTACCAGAAGTATAGACGGGAGATGGAGCAGGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS CAA 72 bp | CTTGCATTCCTCATACGGCACGGTCAGGAAGTAGCGTaGGCTGTACAAGTCCACCAGGGGCCTGTAGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: LAFLIRHGQEVA*AVQVHQGPVAV Trigger: TACAGCTACAGGCCCCTGGTGGACTTGTACAGCCAACGCTACTTCCTGACCGTGCCGTATGAGGAATGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS GCA 72 bp | CAGGGACCATGTAAGTACGGCTTCTTCTCCTCCGCTTaGATTCCTCATACGGCACGGTCAGGAAGTAGCGTT | + |
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Preference number: 6 (lower is better) Translates to: QGPCKYGFFSSA*IPHTARSGSSV Trigger: AACGCTACTTCCTGACCGTGCCGTATGAGGAATGCAAGCGGAGGAGAAGAAGCCGTACTTACATGGTCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS GCA 72 bp | AAGCACGTCCCACTGTTTAAAGCCGTCCTCTCCGACTaGTATTTGGTCCTGGGGCTTGAAGAAGTCATCCTG | + |
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Preference number: 6 (lower is better) Translates to: KHVPLFKAVLSD*YLVLGLEEVIL Trigger: CAGGATGACTTCTTCAAGCCCCAGGACCAAATAGCAGTCGGAGAGGACGGCTTTAAACAGTGGGACGTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS CAA 72 bp | GTCCCACTGTTTAAAGCCGTCCTCTCCGACTGCTATTaGGTCCTGGGGCTTGAAGAAGTCATCCTGATGGAT | + |
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Preference number: 6 (lower is better) Translates to: VPLFKAVLSDCY*VLGLEEVILMD Trigger: ATCCATCAGGATGACTTCTTCAAGCCCCAGGACCAAATAGCAGTCGGAGAGGACGGCTTTAAACAGTGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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| CDS CAA 72 bp | TGTGTTGAGCAGTCTGTTTTGAATATCCTCCAGAACTaGATGGAAGAGTCCCTCCGGGGACTTCATGCCATC | + |
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Preference number: 6 (lower is better) Translates to: CVEQSVLNILQN*MEESLRGLHAI Trigger: GATGGCATGAAGTCCCCGGAGGGACTCTTCCATCAAGTTCTGGAGGATATTCAAAACAGACTGCTCAACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005069.8 |
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