Pregenerated sensors for NMRK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037847Ensembl transcript IDs: ENSMUST00000042392.14, ENSMUST00000159572.9, ENSMUST00000161080.2, ENSMUST00000237347.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGGGTTTCTGTCTGACGGCATGGCAACACATGGCTCTGGATGTTaGGGACAATGGCACAAAAGTGAACATACAGACGAGCTGCCACTG | + |
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Preference number: 1 (lower is better) Translates to: EGFLSDGMATHGSGC*GQWHKSEHTDELPL Trigger: CAGTGGCAGCTCGTCTGTATGTTCACTTTTGTGCCATTGTCCCCAACATCCAGAGCCATGTGTTGCCATGCCGTCAGACAGAAACCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR TCA 90 bp | GAGCTCTTGGCTTTTGTTCCTATAGAGGAACTGACCCTCTGTGCATaGACTGTGCTGTGCCTCCTGCAGGGTGAGGTCAAGCCATTCTTG | + |
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Preference number: 1 (lower is better) Translates to: ELLAFVPIEELTLCA*TVLCLLQGEVKPFL Trigger: CAAGAATGGCTTGACCTCACCCTGCAGGAGGCACAGCACAGTTCATGCACAGAGGGTCAGTTCCTCTATAGGAACAAAAGCCAAGAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR GCA 90 bp | CTCGGGCTCAATATGCACACCAGAGAACATCCTGCTTCCCCTTTCTaGAGGCTTCTAGAACTGCCCACAGCCACAGTGATTGTTTCAACC | + |
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Preference number: 1 (lower is better) Translates to: LGLNMHTREHPASPF*RLLELPTATVIVST Trigger: GGTTGAAACAATCACTGTGGCTGTGGGCAGTTCTAGAAGCCTGCAGAAAGGGGAAGCAGGATGTTCTCTGGTGTGCATATTGAGCCCGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161080.2 |
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| 3UTR GCA 90 bp | AGGGCATCAGATCTCATTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCGGCACTC | + |
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Preference number: 1 (lower is better) Translates to: RASDLITDGCEPPCG*WDLNSGPLEEQSAL Trigger: GAGTGCCGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGAGATCTGATGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR GCA 90 bp | GGACAATGGCACAAAAGTGAACATACAGACGAGCTGCCACTGTCCTaGAGGACATACTGCATCCCTGTAAATGTCCTTCAGAATAGCCCT | + |
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Preference number: 1 (lower is better) Translates to: GQWHKSEHTDELPLS*RTYCIPVNVLQNSP Trigger: AGGGCTATTCTGAAGGACATTTACAGGGATGCAGTATGTCCTGCAGGACAGTGGCAGCTCGTCTGTATGTTCACTTTTGTGCCATTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR TCA 90 bp | TACTGCATCCCTGTAAATGTCCTTCAGAATAGCCCTTCAAGTATCTaGATCCATCCCGGGAACTTGCTGCACTCCATCTGTGTGGTGTTA | + |
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Preference number: 1 (lower is better) Translates to: YCIPVNVLQNSPSSI*IHPGNLLHSICVVL Trigger: TAACACCACACAGATGGAGTGCAGCAAGTTCCCGGGATGGATTCAGATACTTGAAGGGCTATTCTGAAGGACATTTACAGGGATGCAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR TCA 90 bp | TTTATGGCTACAAGCACAAAGTCTCCAGGCTCTGCAGTAAACTGCTaGCTCAGTCAATGTGAGACCATTACTTCAGGTAATGTTGCTGGT | + |
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Preference number: 1 (lower is better) Translates to: FMATSTKSPGSAVNC*LSQCETITSGNVAG Trigger: ACCAGCAACATTACCTGAAGTAATGGTCTCACATTGACTGAGTCAGCAGTTTACTGCAGAGCCTGGAGACTTTGTGCTTGTAGCCATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCTCTTAGCCAGTGTCGTCTTCCCTCCGTTTGTCACATTCCACAGACCATGTCCCCCTCTCTGTGACTaGGCCCAGGTGGAGGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: KLLASVVFPPFVTFHRPCPPLCD*AQVEAH Trigger: GTGGGCCTCCACCTGGGCCCAGTCACAGAGAGGGGG...ACATGGTCTGTGGAATGTGACAAACGGAGGGAAGACGACACTGGCTAAGAGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161080.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCTGACGGCATGGCAACACATGGCTCTGGATGTTGGGGACAATGGCACAAAAGAGCTGCCACTGTCCTaGAGGACATACTGCATCCCT | + |
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Preference number: 2 (lower is better) Translates to: CLTAWQHMALDVGDNGTKELPLS*RTYCIP Trigger: AGGGATGCAGTATGTCCTGCAGGACAGTGGCAGCTC...TTTTGTGCCATTGTCCCCAACATCCAGAGCCATGTGTTGCCATGCCGTCAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGGCCTCACAGCAAAAGAAGCAAAGGACGGAGAGAGAGAGGTCACTGAACTGAGCTCGGGCTCAATATaGACACCAGAGAACATCCTG | + |
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Preference number: 2 (lower is better) Translates to: PGLTAKEAKDGEREVTELSSGSI*TPENIL Trigger: CAGGATGTTCTCTGGTGTGCATATTGAGCCCGAGCT...CAGTTCAGTGACCTCTCTCTCTCCGTCCTTTGCTTCTTTTGCTGTGAGGCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161080.2 |
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| 3UTR-3UTR CCA 90 bp | CAATATGCACACCAGAGAACATCCTGCTTCCCCTTTCTGCAGGCTTCTAGAACTGTGACTGGGCCCAGGTaGAGGCCCACTGTTACTCTT | + |
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Preference number: 2 (lower is better) Translates to: QYAHQRTSCFPFLQASRTVTGPR*RPTVTL Trigger: AAGAGTAACAGTGGGCCTCCACCTGGGCCCAGTCAC...AGTTCTAGAAGCCTGCAGAAAGGGGAAGCAGGATGTTCTCTGGTGTGCATATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161080.2 |
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| 3UTR-3UTR TCA 90 bp | CAATGTGAGACCATTACTTCAGGTAATGTTGCTGGTTGCAGGTGTGTGTGTGTGGTGCCTCCTGCAGGGTaGGGTCAAGCCATTCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: QCETITSGNVAGCRCVCVVPPAG*GQAILA Trigger: AGCAAGAATGGCTTGACCTCACCCTGCAGGAGGCAC...CACACACACACACCTGCAACCAGCAACATTACCTGAAGTAATGGTCTCACATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR-3UTR TCA 90 bp | GGTCTTTTGGTGCTAGGTAACAGTCAGGAGCTCTTGGCTTTTGTTCCTATAGAGGTGCCTCCTGCAGGGTaGGGTCAAGCCATTCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: GLLVLGNSQELLAFVPIEVPPAG*GQAILA Trigger: AGCAAGAATGGCTTGACCTCACCCTGCAGGAGGCAC...CTCTATAGGAACAAAAGCCAAGAGCTCCTGACTGTTACCTAGCACCAAAAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCTCTTAGCCAGTGTCGTCTTCCCTCCGTTTGTCACATTCCACAGACCATGTTGCCCACAGCCACAGTaGTTGTTTCAACCACGTAGG | + |
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Preference number: 2 (lower is better) Translates to: KLLASVVFPPFVTFHRPCCPQPQ*LFQPRR Trigger: CCTACGTGGTTGAAACAATCACTGTGGCTGTGGGCA...ACATGGTCTGTGGAATGTGACAAACGGAGGGAAGACGACACTGGCTAAGAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161080.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCTTTTGGTGCTAGGTAACAGTCAGGAGCTCTTGGCTTTTGTTCCTATAGAGCTGTGCTGTGCCTCCTaGAGGGTGAGGTCAAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: GLLVLGNSQELLAFVPIELCCAS*RVRSSH Trigger: ATGGCTTGACCTCACCCTGCAGGAGGCACAGCACAG...CTCTATAGGAACAAAAGCCAAGAGCTCCTGACTGTTACCTAGCACCAAAAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR-3UTR GCA 90 bp | GACACACAACTATACACACAAACGCAGAAGCATACACAGCATAGCACCCATTGTCTGTGCTGTGCCTCCTaGAGGGTGAGGTCAAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: DTQLYTQTQKHTQHSTHCLCCAS*RVRSSH Trigger: ATGGCTTGACCTCACCCTGCAGGAGGCACAGCACAG...ACAATGGGTGCTATGCTGTGTATGCTTCTGCGTTTGTGTGTATAGTTGTGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR-3UTR GCA 90 bp | AATGTGAGACCATTACTTCAGGTAATGTTGCTGGTTGCAGGTGTGTGTGTGTGTCTGTGCTGTGCCTCCTaGAGGGTGAGGTCAAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: NVRPLLQVMLLVAGVCVCLCCAS*RVRSSH Trigger: ATGGCTTGACCTCACCCTGCAGGAGGCACAGCACAG...ACACACACACACACCTGCAACCAGCAACATTACCTGAAGTAATGGTCTCACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR-3UTR CCA 90 bp | GAGACCATTACTTCAGGTAATGTTGCTGGTTGCAGGTGTGTGTGTGTGTGTGTGGGCAACACATGGCTCTaGATGTTGGGGACAATGGCA | + |
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Preference number: 2 (lower is better) Translates to: ETITSGNVAGCRCVCVCVGNTWL*MLGTMA Trigger: TGCCATTGTCCCCAACATCCAGAGCCATGTGTTGCC...CACACACACACACACACACCTGCAACCAGCAACATTACCTGAAGTAATGGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR-3UTR GCA 90 bp | GACACACAACTATACACACAAACGCAGAAGCATACACAGCATAGCACCCATTGTGAGCTGCCACTGTCCTaGAGGACATACTGCATCCCT | + |
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Preference number: 2 (lower is better) Translates to: DTQLYTQTQKHTQHSTHCELPLS*RTYCIP Trigger: AGGGATGCAGTATGTCCTGCAGGACAGTGGCAGCTC...ACAATGGGTGCTATGCTGTGTATGCTTCTGCGTTTGTGTGTATAGTTGTGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCTTCTGCAAGCTCTTAGCCAGTGTCGTCTTCCCTCCGTTTGTCACATTCCAAGGAAAAAGGAGGAATaGCTTATTAGAAGCCCGGCT | + |
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Preference number: 2 (lower is better) Translates to: VLLQALSQCRLPSVCHIPRKKEE*LIRSPA Trigger: AGCCGGGCTTCTAATAAGCCATTCCTCCTTTTTCCT...TGGAATGTGACAAACGGAGGGAAGACGACACTGGCTAAGAGCTTGCAGAAGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161080.2 |
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| 3UTR-3UTR TCA 90 bp | CAACACATGGCTCTGGATGTTGGGGACAATGGCACAAAAGTGAACATACAGACGACAATGGCACAAAAGTaGACATACAGACGAGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: QHMALDVGDNGTKVNIQTTMAQK*TYRRAA Trigger: GGCAGCTCGTCTGTATGTTCACTTTTGTGCCATTGT...CGTCTGTATGTTCACTTTTGTGCCATTGTCCCCAACATCCAGAGCCATGTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR-3UTR CCA 90 bp | CAACACATGGCTCTGGATGTTGGGGACAATGGCACAAAAGTGAACATACAGACGCATGGCTCTGGATGTTaGGGACAATGGCACAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: QHMALDVGDNGTKVNIQTHGSGC*GQWHKS Trigger: ACTTTTGTGCCATTGTCCCCAACATCCAGAGCCATG...CGTCTGTATGTTCACTTTTGTGCCATTGTCCCCAACATCCAGAGCCATGTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR-3UTR TCA 90 bp | CAATGTGAGACCATTACTTCAGGTAATGTTGCTGGTTGCAGGTGTGTGTGTGTGACAATGGCACAAAAGTaGACATACAGACGAGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: QCETITSGNVAGCRCVCVTMAQK*TYRRAA Trigger: GGCAGCTCGTCTGTATGTTCACTTTTGTGCCATTGT...CACACACACACACCTGCAACCAGCAACATTACCTGAAGTAATGGTCTCACATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCTTTTGGTGCTAGGTAACAGTCAGGAGCTCTTGGCTTTTGTTCCTATAGAGAGGTCAAGCCATTCTTaGTTTCAGGAGGGGTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: GLLVLGNSQELLAFVPIERSSHS*FQEGFL Trigger: CAGAAACCCCTCCTGAAAGCAAGAATGGCTTGACCT...CTCTATAGGAACAAAAGCCAAGAGCTCCTGACTGTTACCTAGCACCAAAAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCGGCACTCTTATGCACTCCATCTGTGTaGTGTTATCACAAACCTGTA | + |
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Preference number: 2 (lower is better) Translates to: CGCWDLNSGPLEEQSALLCTPSV*CYHKPV Trigger: TACAGGTTTGTGATAACACCACACAGATGGAGTGCA...TAAGAGTGCCGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159572.9 |
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| 3UTR-3UTR GCA 90 bp | TTAACAATTACAAGTGAATTTATGGCTACAAGCACAAAGTCTCCAGGCTCTGCAGAGCTGCCACTGTCCTaGAGGACATACTGCATCCCT | + |
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Preference number: 2 (lower is better) Translates to: LTITSEFMATSTKSPGSAELPLS*RTYCIP Trigger: AGGGATGCAGTATGTCCTGCAGGACAGTGGCAGCTC...TGCAGAGCCTGGAGACTTTGTGCTTGTAGCCATAAATTCACTTGTAATTGTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR-3UTR CCA 90 bp | CAACACATGGCTCTGGATGTTGGGGACAATGGCACAAAAGTGAACATACAGACGGGATGTTGGGGACAATaGCACAAAAGTGAACATACA | + |
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Preference number: 2 (lower is better) Translates to: QHMALDVGDNGTKVNIQTGCWGQ*HKSEHT Trigger: TGTATGTTCACTTTTGTGCCATTGTCCCCAACATCC...CGTCTGTATGTTCACTTTTGTGCCATTGTCCCCAACATCCAGAGCCATGTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR-3UTR CCA 90 bp | AATGTGAGACCATTACTTCAGGTAATGTTGCTGGTTGCAGGTGTGTGTGTGTGTCATGGCTCTGGATGTTaGGGACAATGGCACAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: NVRPLLQVMLLVAGVCVCHGSGC*GQWHKS Trigger: ACTTTTGTGCCATTGTCCCCAACATCCAGAGCCATG...ACACACACACACACCTGCAACCAGCAACATTACCTGAAGTAATGGTCTCACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR-3UTR GCA 90 bp | AATGTGAGACCATTACTTCAGGTAATGTTGCTGGTTGCAGGTGTGTGTGTGTGTTCCTGCAGGACATACTaGATCCCTGTAAATGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: NVRPLLQVMLLVAGVCVCSCRTY*IPVNVL Trigger: AAGGACATTTACAGGGATGCAGTATGTCCTGCAGGA...ACACACACACACACCTGCAACCAGCAACATTACCTGAAGTAATGGTCTCACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR-3UTR CCA 90 bp | TGGACACACAACTATACACACAAACGCAGAAGCATACACAGCATAGCACCCATTGGATGTTGGGGACAATaGCACAAAAGTGAACATACA | + |
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Preference number: 2 (lower is better) Translates to: WTHNYTHKRRSIHSIAPIGCWGQ*HKSEHT Trigger: TGTATGTTCACTTTTGTGCCATTGTCCCCAACATCC...AATGGGTGCTATGCTGTGTATGCTTCTGCGTTTGTGTGTATAGTTGTGTGTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTTCATCTATGTCTATCTCAGACTCTGGCTTGAAGAAGTCATCCTGAGATATGTTTTGTTTTGCAGGTaGAATCACAGGTTTGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: IFIYVYLRLWLEEVILRYVLFCR*NHRFER Trigger: TCTCTCAAACCTGTGATTTCACCTGCAAAACAAAAC...ATATCTCAGGATGACTTCTTCAAGCCAGAGTCTGAGATAGACATAGATGAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161080.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGCTGCTCTAGATATATTCATAATTTTAACTCCCACATTGAACGAGGTACTATTACAAGTGAATTTATaGCTACAAGCACAAAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: RAALDIFIILTPTLNEVLLQVNL*LQAQSL Trigger: GAGACTTTGTGCTTGTAGCCATAAATTCACTTGTAA...TAGTACCTCGTTCAATGTGGGAGTTAAAATTATGAATATATCTAGAGCAGCCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237347.2 |
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| 3UTR TCA 72 bp | ACATGGCTCTGGATGTTGGGGACAATGGCACAAAAGTaGACATACAGACGAGCTGCCACTGTCCTGCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: TWLWMLGTMAQK*TYRRAATVLQD Trigger: GTCCTGCAGGACAGTGGCAGCTCGTCTGTATGTTCACTTTTGTGCCATTGTCCCCAACATCCAGAGCCATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR GCA 72 bp | ATAGCTCGGGCTCAATATGCACACCAGAGAACATCCTaGTTCCCCTTTCTGCAGGCTTCTAGAACTGCCCAC | + |
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Preference number: 3 (lower is better) Translates to: IARAQYAHQRTS*FPFLQASRTAH Trigger: GTGGGCAGTTCTAGAAGCCTGCAGAAAGGGGAAGCAGGATGTTCTCTGGTGTGCATATTGAGCCCGAGCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161080.2 |
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| 3UTR CCA 72 bp | GGCATGGCAACACATGGCTCTGGATGTTGGGGACAATaGCACAAAAGTGAACATACAGACGAGCTGCCACTG | + |
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Preference number: 3 (lower is better) Translates to: GMATHGSGCWGQ*HKSEHTDELPL Trigger: CAGTGGCAGCTCGTCTGTATGTTCACTTTTGTGCCATTGTCCCCAACATCCAGAGCCATGTGTTGCCATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR CCA 72 bp | ATTCTTGCTTTCAGGAGGGGTTTCTGTCTGACGGCATaGCAACACATGGCTCTGGATGTTGGGGACAATGGC | + |
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Preference number: 3 (lower is better) Translates to: ILAFRRGFCLTA*QHMALDVGDNG Trigger: GCCATTGTCCCCAACATCCAGAGCCATGTGTTGCCATGCCGTCAGACAGAAACCCCTCCTGAAAGCAAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR CCA 72 bp | CTGTCTGACGGCATGGCAACACATGGCTCTGGATGTTaGGGACAATGGCACAAAAGTGAACATACAGACGAG | + |
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Preference number: 3 (lower is better) Translates to: LSDGMATHGSGC*GQWHKSEHTDE Trigger: CTCGTCTGTATGTTCACTTTTGTGCCATTGTCCCCAACATCCAGAGCCATGTGTTGCCATGCCGTCAGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR-3UTR CAA 90 bp | ACACACAAACGCAGAAGCATACACAGCATAGCACCCATTGTTGGCCTAGACGACACATGGCTCTGGATGTaGGGGACAATGGCACAAAAG | + |
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Preference number: 3 (lower is better) Translates to: THKRRSIHSIAPIVGLDDTWLWM*GTMAQK Trigger: CTTTTGTGCCATTGTCCCCAACATCCAGAGCCATGT...GTCGTCTAGGCCAACAATGGGTGCTATGCTGTGTATGCTTCTGCGTTTGTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR GCA 72 bp | CATACAGACGAGCTGCCACTGTCCTGCAGGACATACTaGATCCCTGTAAATGTCCTTCAGAATAGCCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: HTDELPLSCRTY*IPVNVLQNSPS Trigger: TGAAGGGCTATTCTGAAGGACATTTACAGGGATGCAGTATGTCCTGCAGGACAGTGGCAGCTCGTCTGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR GCA 72 bp | AATATGCACACCAGAGAACATCCTGCTTCCCCTTTCTaGAGGCTTCTAGAACTGCCCACAGCCACAGTGATT | + |
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Preference number: 3 (lower is better) Translates to: NMHTREHPASPF*RLLELPTATVI Trigger: AATCACTGTGGCTGTGGGCAGTTCTAGAAGCCTGCAGAAAGGGGAAGCAGGATGTTCTCTGGTGTGCATATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161080.2 |
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| 3UTR CCA 72 bp | GAATCCATCCCGGGAACTTGCTGCACTCCATCTGTGTaGTGTTATCACAAACCTGTAATCTCAGCACTTGGG | + |
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Preference number: 3 (lower is better) Translates to: ESIPGTCCTPSV*CYHKPVISALG Trigger: CCCAAGTGCTGAGATTACAGGTTTGTGATAACACCACACAGATGGAGTGCAGCAAGTTCCCGGGATGGATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159572.9 |
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| 3UTR-3UTR CAA 90 bp | ATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTACATGGCTCTGGATGTaGGGGACAATGGCACAAAAG | + |
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Preference number: 3 (lower is better) Translates to: ITDGCEPPCGCWDLNSGPTWLWM*GTMAQK Trigger: CTTTTGTGCCATTGTCCCCAACATCCAGAGCCATGT...AGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR-3UTR CAA 90 bp | ATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTGAGGTCAAGCCATTCTaGCTTTCAGGAGGGGTTTCT | + |
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Preference number: 3 (lower is better) Translates to: ITDGCEPPCGCWDLNSGPEVKPF*LSGGVS Trigger: AGAAACCCCTCCTGAAAGCAAGAATGGCTTGACCTC...AGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| 3UTR TCA 72 bp | ATGTCTATCTCAGACTCTGGCTTGAAGAAGTCATCCTaGGATATGACGCTGCAGTTGGGAAGGTGCTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: MSISDSGLKKSS*DMTLQLGRCFC Trigger: GCAGAAGCACCTTCCCAACTGCAGCGTCATATCTCAGGATGACTTCTTCAAGCCAGAGTCTGAGATAGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161080.2 |
||
| 3UTR GCA 72 bp | CACAAAAGTGAACATACAGACGAGCTGCCACTGTCCTaGAGGACATACTGCATCCCTGTAAATGTCCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: HKSEHTDELPLS*RTYCIPVNVLQ Trigger: CTGAAGGACATTTACAGGGATGCAGTATGTCCTGCAGGACAGTGGCAGCTCGTCTGTATGTTCACTTTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| 3UTR GCA 72 bp | GCCCTTCAAGTATCTGAATCCATCCCGGGAACTTGCTaGACTCCATCTGTGTGGTGTTATCACAAACCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: ALQVSESIPGTC*TPSVWCYHKPV Trigger: TACAGGTTTGTGATAACACCACACAGATGGAGTGCAGCAAGTTCCCGGGATGGATTCAGATACTTGAAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159572.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGACACACAACTATACACACAAACGCAGAAGCATACACAGCATAGCACCCATTACATGGCTCTGGATGTaGGGGACAATGGCACAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: WTHNYTHKRRSIHSIAPITWLWM*GTMAQK Trigger: CTTTTGTGCCATTGTCCCCAACATCCAGAGCCATGT...AATGGGTGCTATGCTGTGTATGCTTCTGCGTTTGTGTGTATAGTTGTGTGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| 3UTR-3UTR CAA 90 bp | GACACACAACTATACACACAAACGCAGAAGCATACACAGCATAGCACCCATTGTGAGGTCAAGCCATTCTaGCTTTCAGGAGGGGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: DTQLYTQTQKHTQHSTHCEVKPF*LSGGVS Trigger: AGAAACCCCTCCTGAAAGCAAGAATGGCTTGACCTC...ACAATGGGTGCTATGCTGTGTATGCTTCTGCGTTTGTGTGTATAGTTGTGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| 3UTR TCA 72 bp | CCTGTAAATGTCCTTCAGAATAGCCCTTCAAGTATCTaGATCCATCCCGGGAACTTGCTGCACTCCATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PVNVLQNSPSSI*IHPGNLLHSIC Trigger: ACAGATGGAGTGCAGCAAGTTCCCGGGATGGATTCAGATACTTGAAGGGCTATTCTGAAGGACATTTACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| 3UTR GCA 72 bp | CAATGTGAGACCATTACTTCAGGTAATGTTGCTGGTTaGAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: QCETITSGNVAG*RCVCVCVCVCV Trigger: CACACACACACACACACACACACACACACACCTGCAACCAGCAACATTACCTGAAGTAATGGTCTCACATTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| 3UTR TCA 72 bp | TTGTCACATTCCACAGACCATGTTTTGTTTTGCAGGTaGAATCACAGGTTTGAGAGAGACCCTGGCCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: LSHSTDHVLFCR*NHRFERDPGLT Trigger: TGTGAGGCCAGGGTCTCTCTCAAACCTGTGATTTCACCTGCAAAACAAAACATGGTCTGTGGAATGTGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161080.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGTCAATGTGAGACCATTACTTCAGGTAATGTTGCTGGTTGCAGGTGTGTGTAACAGTCAGGAGCTCTaGGCTTTTGTTCCTATAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SVNVRPLLQVMLLVAGVCNSQEL*AFVPIE Trigger: CTCTATAGGAACAAAAGCCAAGAGCTCCTGACTGTT...ACACACACCTGCAACCAGCAACATTACCTGAAGTAATGGTCTCACATTGACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| 3UTR GCA 72 bp | TTGAACGAGGTACTAAGAAATTCCCCAGCTCACATCTaGCTGTACTTTTCTAAGAAAGGCCCTGGTTTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: LNEVLRNSPAHI*LYFSKKGPGFL Trigger: TAGGAAACCAGGGCCTTTCTTAGAAAAGTACAGGCAGATGTGAGCTGGGGAATTTCTTAGTACCTCGTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237347.2 |
||
| 3UTR CCA 72 bp | GGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGCGGCATTACTATGAGACAATTTTTCAAATTATA | + |
|
Preference number: 3 (lower is better) Translates to: GVCVCVCVCVCV*RHYYETIFQII Trigger: TATAATTTGAAAAATTGTCTCATAGTAATGCCGCCACACACACACACACACACACACACACACACACACACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| 3UTR TCA 72 bp | AAGGCCCTGGTTTCCTATATGATTGAAGAAACTATATaGTTCTGTATTCAGAGTGTTAGCTTCAGAAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: KALVSYMIEETI*FCIQSVSFRKP Trigger: TGGTTTTCTGAAGCTAACACTCTGAATACAGAATCATATAGTTTCTTCAATCATATAGGAAACCAGGGCCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237347.2 |
||
| CDS-3UTR GCA 90 bp | ACTGTGCTGTGCCTCCTGCAGGGTGAGGTCAAGCCATTCTTGCTTTCAGGAGGGAGCACTTTCCAAGGCTaGTGGTCCCGCAGAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVLCLLQGEVKPFLLSGGSTFQG*WSRRAS Trigger: GGAAGCTCTGCGGGACCAGCAGCCTTGGAAAGTGCT...CCCTCCTGAAAGCAAGAATGGCTTGACCTCACCCTGCAGGAGGCACAGCACAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR GCA 90 bp | GGTTTCTGTCTGACGGCATGGCAACACATGGCTCTGGATGTTGGGGACAATGGCAGCACTTTCCAAGGCTaGTGGTCCCGCAGAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GFCLTAWQHMALDVGDNGSTFQG*WSRRAS Trigger: GGAAGCTCTGCGGGACCAGCAGCCTTGGAAAGTGCT...GCCATTGTCCCCAACATCCAGAGCCATGTGTTGCCATGCCGTCAGACAGAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR CCA 90 bp | GGTCAAGCCATTCTTGCTTTCAGGAGGGGTTTCTGTCTGACGGCATGGCAACACACTTTCCAAGGCTGCTaGTCCCGCAGAGCTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GQAILAFRRGFCLTAWQHTFQGC*SRRASW Trigger: CCAGGAAGCTCTGCGGGACCAGCAGCCTTGGAAAGT...GTGTTGCCATGCCGTCAGACAGAAACCCCTCCTGAAAGCAAGAATGGCTTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR CCA 90 bp | CCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCGGCAACTTTCCAAGGCTGCTaGTCCCGCAGAGCTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PPCGCWDLNSGPLEEQSATFQGC*SRRASW Trigger: CCAGGAAGCTCTGCGGGACCAGCAGCCTTGGAAAGT...TGCCGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGGTTTCTGTCTGACGGCATGGCAACACATGGCTCTGGATGTTGGGGACAAGCCATCGAAGTACCCTaGAGGGTCTGGAGGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: EGFLSDGMATHGSGCWGQAIEVP*RVWRLI Trigger: TATGAGCCTCCAGACCCTCCAGGGTACTTCGATGGC...TTGTCCCCAACATCCAGAGCCATGTGTTGCCATGCCGTCAGACAGAAACCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR GCA 90 bp | GAACTGTGCTGTGCCTCCTGCAGGGTGAGGTCAAGCCATTCTTGCTTTCAGGAGCTGCAGTTGGGAAGGTaGTTCTGCAAGCTCTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ELCCASCRVRSSHSCFQELQLGR*FCKLLA Trigger: GGCTAAGAGCTTGCAGAAGCACCTTCCCAACTGCAG...CTCCTGAAAGCAAGAATGGCTTGACCTCACCCTGCAGGAGGCACAGCACAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR GCA 90 bp | ACTGTGCTGTGCCTCCTGCAGGGTGAGGTCAAGCCATTCTTGCTTTCAGGAGGGGGATGGCCAGGGATATaGAGAGAAGCCCTGTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: TVLCLLQGEVKPFLLSGGGWPGI*REALSF Trigger: AAATGACAGGGCTTCTCTGCATATCCCTGGCCATCC...CCCTCCTGAAAGCAAGAATGGCTTGACCTCACCCTGCAGGAGGCACAGCACAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159572.9 |
||
| CDS-3UTR CCA 90 bp | CCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCGGCAGCCATCGAAGTACCCTaGAGGGTCTGGAGGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: PPCGCWDLNSGPLEEQSAAIEVP*RVWRLI Trigger: TATGAGCCTCCAGACCCTCCAGGGTACTTCGATGGC...TGCCGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR TCA 90 bp | GAGGGGTTTCTGTCTGACGGCATGGCAACACATGGCTCTGGATGTTGGGGACAAAGTCATCCTGAGATATaGCGCTGCAGTTGGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EGFLSDGMATHGSGCWGQSHPEI*RCSWEG Trigger: ACCTTCCCAACTGCAGCGTCATATCTCAGGATGACT...TTGTCCCCAACATCCAGAGCCATGTGTTGCCATGCCGTCAGACAGAAACCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCAGGACCTTTGGAAGAGCAGTCGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSGPLEEQSAL Trigger: GAGTGCCGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTGCTGTGCCTCCTGCAGGGTGAGGTCAAGCCATTCTTGCTTTCAGGAGGGGAGGCTCATATACTCTaGTACTCCTTCTCCTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: TVLCLLQGEVKPFLLSGGEAHIL*YSFSSY Trigger: GTAAGAGGAGAAGGAGTACCAGAGTATATGAGCCTC...CCCTCCTGAAAGCAAGAATGGCTTGACCTCACCCTGCAGGAGGCACAGCACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR CCA 90 bp | AGACGAGCTGCCACTGTCCTGCAGGACATACTGCATCCCTGTAAATGTCCTTCATGTGCTTTAGGTACATaGGCCACACGTGGCCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: RRAATVLQDILHPCKCPSCALGT*ATRGHR Trigger: TCGATGGCCACGTGTGGCCCATGTACCTAAAGCACA...TGAAGGACATTTACAGGGATGCAGTATGTCCTGCAGGACAGTGGCAGCTCGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR TCA 90 bp | GAGGGGTTTCTGTCTGACGGCATGGCAACACATGGCTCTGGATGTTGGGGACAATTGAAGAAGTCATCCTaGGATATGACGCTGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EGFLSDGMATHGSGCWGQLKKSS*DMTLQL Trigger: CAACTGCAGCGTCATATCTCAGGATGACTTCTTCAA...TTGTCCCCAACATCCAGAGCCATGTGTTGCCATGCCGTCAGACAGAAACCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR TCA 90 bp | GGTTTCTGTCTGACGGCATGGCAACACATGGCTCTGGATGTTGGGGACAATGGCTCTCAGACTCTGGCTTaGAGAAGTCATCCTGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: GFCLTAWQHMALDVGDNGSQTLA*RSHPEI Trigger: TATCTCAGGATGACTTCTTCAAGCCAGAGTCTGAGA...GCCATTGTCCCCAACATCCAGAGCCATGTGTTGCCATGCCGTCAGACAGAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR TCA 90 bp | GAGGGGTTTCTGTCTGACGGCATGGCAACACATGGCTCTGGATGTTGGGGACAAACATCTTCATACACCTaGGAGAAGAGGTCCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EGFLSDGMATHGSGCWGQTSSYT*EKRSSS Trigger: TGAAGAGGACCTCTTCTCTCAGGTGTATGAAGATGT...TTGTCCCCAACATCCAGAGCCATGTGTTGCCATGCCGTCAGACAGAAACCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR GCA 90 bp | AGACGAGCTGCCACTGTCCTGCAGGACATACTGCATCCCTGTAAATGTCCTTCATTGGGAAGGTGCTTCTaGAAGCTCTTAGCCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RRAATVLQDILHPCKCPSLGRCF*KLLASV Trigger: GACACTGGCTAAGAGCTTGCAGAAGCACCTTCCCAA...TGAAGGACATTTACAGGGATGCAGTATGTCCTGCAGGACAGTGGCAGCTCGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR GCA 90 bp | TCTGGATGTTGGGGACAATGGCACAAAAGTGAACATACAGACGAGCTGCCACTGCTGCAGTTGGGAAGGTaGTTCTGCAAGCTCTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SGCWGQWHKSEHTDELPLLQLGR*FCKLLA Trigger: GGCTAAGAGCTTGCAGAAGCACCTTCCCAACTGCAG...CAGTGGCAGCTCGTCTGTATGTTCACTTTTGTGCCATTGTCCCCAACATCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR CCA 90 bp | ACACACAAACGCAGAAGCATACACAGCATAGCACCCATTGTTGGCCTAGACGACTGTGCTTTAGGTACATaGGCCACACGTGGCCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: THKRRSIHSIAPIVGLDDCALGT*ATRGHR Trigger: TCGATGGCCACGTGTGGCCCATGTACCTAAAGCACA...GTCGTCTAGGCCAACAATGGGTGCTATGCTGTGTATGCTTCTGCGTTTGTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR GCA 90 bp | GGTTTCTGTCTGACGGCATGGCAACACATGGCTCTGGATGTTGGGGACAATGGCTGCTTCTCTAGTTCCTaGTTGACATCTTCATACACC | + |
|
Preference number: 4 (lower is better) Translates to: GFCLTAWQHMALDVGDNGCFSSS*LTSSYT Trigger: GGTGTATGAAGATGTCAAGCAGGAACTAGAGAAGCA...GCCATTGTCCCCAACATCCAGAGCCATGTGTTGCCATGCCGTCAGACAGAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR GCA 90 bp | CACGTAGGAAAAAGGAGGAATGGCTTATTAGAAGCCCGGCTGTCCATGAACCCAGGTGACATCTGGAGATaGAGGTGCCTGATAGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HVGKRRNGLLEARLSMNPGDIWR*RCLIEL Trigger: CAACTCTATCAGGCACCTGCATCTCCAGATGTCACC...TGGGTTCATGGACAGCCGGGCTTCTAATAAGCCATTCCTCCTTTTTCCTACGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161080.2 |
||
| CDS-3UTR CCA 90 bp | GACACACAACTATACACACAAACGCAGAAGCATACACAGCATAGCACCCATTGTACTTTCCAAGGCTGCTaGTCCCGCAGAGCTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DTQLYTQTQKHTQHSTHCTFQGC*SRRASW Trigger: CCAGGAAGCTCTGCGGGACCAGCAGCCTTGGAAAGT...ACAATGGGTGCTATGCTGTGTATGCTTCTGCGTTTGTGTGTATAGTTGTGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR TCA 90 bp | GAGACCATTACTTCAGGTAATGTTGCTGGTTGCAGGTGTGTGTGTGTGTGTGTGAGTCATCCTGAGATATaGCGCTGCAGTTGGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ETITSGNVAGCRCVCVCVSHPEI*RCSWEG Trigger: ACCTTCCCAACTGCAGCGTCATATCTCAGGATGACT...CACACACACACACACACACCTGCAACCAGCAACATTACCTGAAGTAATGGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR CCA 90 bp | GACACACAACTATACACACAAACGCAGAAGCATACACAGCATAGCACCCATTGTGCCATCGAAGTACCCTaGAGGGTCTGGAGGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: DTQLYTQTQKHTQHSTHCAIEVP*RVWRLI Trigger: TATGAGCCTCCAGACCCTCCAGGGTACTTCGATGGC...ACAATGGGTGCTATGCTGTGTATGCTTCTGCGTTTGTGTGTATAGTTGTGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR TCA 90 bp | ACACACAAACGCAGAAGCATACACAGCATAGCACCCATTGTTGGCCTAGACGACTTGAAGAAGTCATCCTaGGATATGACGCTGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: THKRRSIHSIAPIVGLDDLKKSS*DMTLQL Trigger: CAACTGCAGCGTCATATCTCAGGATGACTTCTTCAA...GTCGTCTAGGCCAACAATGGGTGCTATGCTGTGTATGCTTCTGCGTTTGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR TCA 90 bp | TCTGGATGTTGGGGACAATGGCACAAAAGTGAACATACAGACGAGCTGCCACTGTCTCAGACTCTGGCTTaGAGAAGTCATCCTGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: SGCWGQWHKSEHTDELPLSQTLA*RSHPEI Trigger: TATCTCAGGATGACTTCTTCAAGCCAGAGTCTGAGA...CAGTGGCAGCTCGTCTGTATGTTCACTTTTGTGCCATTGTCCCCAACATCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR GCA 90 bp | ACTTGGACACACAACTATACACACAAACGCAGAAGCATACACAGCATAGCACCCTTGGGAAGGTGCTTCTaGAAGCTCTTAGCCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TWTHNYTHKRRSIHSIAPLGRCF*KLLASV Trigger: GACACTGGCTAAGAGCTTGCAGAAGCACCTTCCCAA...GGGTGCTATGCTGTGTATGCTTCTGCGTTTGTGTGTATAGTTGTGTGTCCAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR GCA 90 bp | GGATGTTGGGGACAATGGCACAAAAGTGAACATACAGACGAGCTGCCACTGTCCTGCTTCTCTAGTTCCTaGTTGACATCTTCATACACC | + |
|
Preference number: 4 (lower is better) Translates to: GCWGQWHKSEHTDELPLSCFSSS*LTSSYT Trigger: GGTGTATGAAGATGTCAAGCAGGAACTAGAGAAGCA...GGACAGTGGCAGCTCGTCTGTATGTTCACTTTTGTGCCATTGTCCCCAACATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR TCA 90 bp | TGGACACACAACTATACACACAAACGCAGAAGCATACACAGCATAGCACCCATTAGTCATCCTGAGATATaGCGCTGCAGTTGGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WTHNYTHKRRSIHSIAPISHPEI*RCSWEG Trigger: ACCTTCCCAACTGCAGCGTCATATCTCAGGATGACT...AATGGGTGCTATGCTGTGTATGCTTCTGCGTTTGTGTGTATAGTTGTGTGTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR TCA 90 bp | CAACACATGGCTCTGGATGTTGGGGACAATGGCACAAAAGTGAACATACAGACGACATCTTCATACACCTaGGAGAAGAGGTCCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QHMALDVGDNGTKVNIQTTSSYT*EKRSSS Trigger: TGAAGAGGACCTCTTCTCTCAGGTGTATGAAGATGT...CGTCTGTATGTTCACTTTTGTGCCATTGTCCCCAACATCCAGAGCCATGTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR TCA 90 bp | TTAACAATTACAAGTGAATTTATGGCTACAAGCACAAAGTCTCCAGGCTCTGCAGCATGGTCTACAGACTaGCTTCCAGGATGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTITSEFMATSTKSPGSAAWSTD*LPGWPG Trigger: CCCTGGCCATCCTGGAAGTCAGTCTGTAGACCATGC...TGCAGAGCCTGGAGACTTTGTGCTTGTAGCCATAAATTCACTTGTAATTGTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159572.9 |
||
| CDS-3UTR GCA 90 bp | AATGTGAGACCATTACTTCAGGTAATGTTGCTGGTTGCAGGTGTGTGTGTGTGTTTGGGAAGGTGCTTCTaGAAGCTCTTAGCCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NVRPLLQVMLLVAGVCVCLGRCF*KLLASV Trigger: GACACTGGCTAAGAGCTTGCAGAAGCACCTTCCCAA...ACACACACACACACCTGCAACCAGCAACATTACCTGAAGTAATGGTCTCACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
||
| CDS-3UTR CCA 90 bp | GAGACCATTACTTCAGGTAATGTTGCTGGTTGCAGGTGTGTGTGTGTGTGTGTGGAGGCTCATATACTCTaGTACTCCTTCTCCTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ETITSGNVAGCRCVCVCVEAHIL*YSFSSY Trigger: GTAAGAGGAGAAGGAGTACCAGAGTATATGAGCCTC...CACACACACACACACACACCTGCAACCAGCAACATTACCTGAAGTAATGGTCTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| CDS-3UTR CCA 90 bp | AGACGAGCTGCCACTGTCCTGCAGGACATACTGCATCCCTGTAAATGTCCTTCAAACTTCTGTTCCATATaGTGTCCAGAGGCTTATAAT | + |
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Preference number: 4 (lower is better) Translates to: RRAATVLQDILHPCKCPSNFCSI*CPEAYN Trigger: ATTATAAGCCTCTGGACACCATATGGAACAGAAGTT...TGAAGGACATTTACAGGGATGCAGTATGTCCTGCAGGACAGTGGCAGCTCGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| CDS-3UTR TCA 90 bp | GACACACAACTATACACACAAACGCAGAAGCATACACAGCATAGCACCCATTGTTCTCAGACTCTGGCTTaGAGAAGTCATCCTGAGATA | + |
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Preference number: 4 (lower is better) Translates to: DTQLYTQTQKHTQHSTHCSQTLA*RSHPEI Trigger: TATCTCAGGATGACTTCTTCAAGCCAGAGTCTGAGA...ACAATGGGTGCTATGCTGTGTATGCTTCTGCGTTTGTGTGTATAGTTGTGTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| CDS-3UTR GCA 90 bp | CAATGTGAGACCATTACTTCAGGTAATGTTGCTGGTTGCAGGTGTGTGTGTGTGTGCTTCTCTAGTTCCTaGTTGACATCTTCATACACC | + |
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Preference number: 4 (lower is better) Translates to: QCETITSGNVAGCRCVCVCFSSS*LTSSYT Trigger: GGTGTATGAAGATGTCAAGCAGGAACTAGAGAAGCA...CACACACACACACCTGCAACCAGCAACATTACCTGAAGTAATGGTCTCACATTG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| CDS-3UTR CCA 90 bp | AATGTGAGACCATTACTTCAGGTAATGTTGCTGGTTGCAGGTGTGTGTGTGTGTGAGGCTCATATACTCTaGTACTCCTTCTCCTCTTAC | + |
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Preference number: 4 (lower is better) Translates to: NVRPLLQVMLLVAGVCVCEAHIL*YSFSSY Trigger: GTAAGAGGAGAAGGAGTACCAGAGTATATGAGCCTC...ACACACACACACACCTGCAACCAGCAACATTACCTGAAGTAATGGTCTCACATT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| CDS-3UTR CCA 90 bp | AGGGCTGCTCTAGATATATTCATAATTTTAACTCCCACATTGAACGAGGTACTATGTGCTTTAGGTACATaGGCCACACGTGGCCATCGA | + |
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Preference number: 4 (lower is better) Translates to: RAALDIFIILTPTLNEVLCALGT*ATRGHR Trigger: TCGATGGCCACGTGTGGCCCATGTACCTAAAGCACA...TAGTACCTCGTTCAATGTGGGAGTTAAAATTATGAATATATCTAGAGCAGCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237347.2 |
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| CDS-3UTR CCA 90 bp | CAATGTGAGACCATTACTTCAGGTAATGTTGCTGGTTGCAGGTGTGTGTGTGTGAACTTCTGTTCCATATaGTGTCCAGAGGCTTATAAT | + |
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Preference number: 4 (lower is better) Translates to: QCETITSGNVAGCRCVCVNFCSI*CPEAYN Trigger: ATTATAAGCCTCTGGACACCATATGGAACAGAAGTT...CACACACACACACCTGCAACCAGCAACATTACCTGAAGTAATGGTCTCACATTG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| CDS-3UTR GCA 90 bp | ATTTTCATCTATGTCTATCTCAGACTCTGGCTTGAAGAAGTCATCCTGAGATATATCTGGAGATGCAGGTaGCTGATAGAGTTGTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: IFIYVYLRLWLEEVILRYIWRCR*LIELCV Trigger: GACACACAACTCTATCAGGCACCTGCATCTCCAGAT...ATATCTCAGGATGACTTCTTCAAGCCAGAGTCTGAGATAGACATAGATGAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161080.2 |
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| 3UTR CAA 72 bp | GCTGCTCTAGATATATTCATAATTTTAACTCCCACATaGAACGAGGTACTAAGAAATTCCCCAGCTCACATC | + |
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Preference number: 4 (lower is better) Translates to: AALDIFIILTPT*NEVLRNSPAHI Trigger: GATGTGAGCTGGGGAATTTCTTAGTACCTCGTTCAATGTGGGAGTTAAAATTATGAATATATCTAGAGCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237347.2 |
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| CDS GCA 90 bp | AGTGTTTGTTGCCTCTGGCTGGCCGGTGACATCTGGAGATGCAGGTaGCTGATAGAGTTGTGTGTCCTGTTTCCGGCTCTCCCACCAATT | + |
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Preference number: 5 (lower is better) Translates to: SVCCLWLAGDIWRCR*LIELCVLFPALPPI Trigger: AATTGGTGGGAGAGCCGGAAACAGGACACACAACTCTATCAGGCACCTGCATCTCCAGATGTCACCGGCCAGCCAGAGGCAACAAACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161080.2 |
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| CDS-3UTR CAA 90 bp | GGATGTTGGGGACAATGGCACAAAAGTGAACATACAGACGAGCTGCCACTGTCCTCGTCTTCCCTCCGTTaGTCACACCACCAATTCCAA | + |
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Preference number: 5 (lower is better) Translates to: GCWGQWHKSEHTDELPLSSSSLR*SHHQFQ Trigger: TTGGAATTGGTGGTGTGACAAACGGAGGGAAGACGA...GGACAGTGGCAGCTCGTCTGTATGTTCACTTTTGTGCCATTGTCCCCAACATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| CDS-3UTR CAA 90 bp | TTCTGCAAGCTCTTAGCCAGTGTCGTCTTCCCTCCGTTTGTCACATTCCACAGAAGGTGCCTGATAGAGTaGTGTGTCCTGTTTCCGGCT | + |
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Preference number: 5 (lower is better) Translates to: FCKLLASVVFPPFVTFHRRCLIE*CVLFPA Trigger: AGCCGGAAACAGGACACACAACTCTATCAGGCACCT...TCTGTGGAATGTGACAAACGGAGGGAAGACGACACTGGCTAAGAGCTTGCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161080.2 |
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| CDS-3UTR CAA 90 bp | TCTGGATGTTGGGGACAATGGCACAAAAGTGAACATACAGACGAGCTGCCACTGTCGTCTTCCCTCCGTTaGTCACACCACCAATTCCAA | + |
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Preference number: 5 (lower is better) Translates to: SGCWGQWHKSEHTDELPLSSSLR*SHHQFQ Trigger: TTGGAATTGGTGGTGTGACAAACGGAGGGAAGACGA...CAGTGGCAGCTCGTCTGTATGTTCACTTTTGTGCCATTGTCCCCAACATCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| CDS-3UTR CAA 90 bp | GGATGTTGGGGACAATGGCACAAAAGTGAACATACAGACGAGCTGCCACTGTCCGGTCCTCTTCAGACCTaGTTCCATCCAGGTAAACAA | + |
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Preference number: 5 (lower is better) Translates to: GCWGQWHKSEHTDELPLSGPLQT*FHPGKQ Trigger: TTGTTTACCTGGATGGAACAAGGTCTGAAGAGGACC...GGACAGTGGCAGCTCGTCTGTATGTTCACTTTTGTGCCATTGTCCCCAACATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| CDS-3UTR CAA 90 bp | GGCTCTGGATGTTGGGGACAATGGCACAAAAGTGAACATACAGACGAGCTGCCAGGTCCTCTTCAGACCTaGTTCCATCCAGGTAAACAA | + |
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Preference number: 5 (lower is better) Translates to: GSGCWGQWHKSEHTDELPGPLQT*FHPGKQ Trigger: TTGTTTACCTGGATGGAACAAGGTCTGAAGAGGACC...TGGCAGCTCGTCTGTATGTTCACTTTTGTGCCATTGTCCCCAACATCCAGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| CDS-3UTR CAA 90 bp | GAGACCATTACTTCAGGTAATGTTGCTGGTTGCAGGTGTGTGTGTGTGTGTGTGTCGTCTTCCCTCCGTTaGTCACACCACCAATTCCAA | + |
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Preference number: 5 (lower is better) Translates to: ETITSGNVAGCRCVCVCVSSSLR*SHHQFQ Trigger: TTGGAATTGGTGGTGTGACAAACGGAGGGAAGACGA...CACACACACACACACACACCTGCAACCAGCAACATTACCTGAAGTAATGGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| CDS GCA 72 bp | TGCCTCTGGCTGGCCGGTGACATCTGGAGATGCAGGTaGCTGATAGAGTTGTGTGTCCTGTTTCCGGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: CLWLAGDIWRCR*LIELCVLFPAL Trigger: GAGAGCCGGAAACAGGACACACAACTCTATCAGGCACCTGCATCTCCAGATGTCACCGGCCAGCCAGAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161080.2 |
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| CDS CCA 72 bp | GGGCCACACGTGGCCATCGAAGTACCCTGGAGGGTCTaGAGGCTCATATACTCTGGTACTCCTTCTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: GPHVAIEVPWRV*RLIYSGTPSPL Trigger: AAGAGGAGAAGGAGTACCAGAGTATATGAGCCTCCAGACCCTCCAGGGTACTTCGATGGCCACGTGTGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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| CDS CCA 72 bp | GTCAGTGTTTGTTGCCTCTGGCTGGCCGGTGACATCTaGAGATGCAGGTGCCTGATAGAGTTGTGTGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: VSVCCLWLAGDI*RCRCLIELCVL Trigger: CAGGACACACAACTCTATCAGGCACCTGCATCTCCAGATGTCACCGGCCAGCCAGAGGCAACAAACACTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161080.2 |
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| CDS GCA 72 bp | GGATGGCCAGGGATATGCAGAGAAGCCCTGTCATTTTaGTTCTCTAGTTCCTGCTTGACATCTTCATACACC | + |
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Preference number: 6 (lower is better) Translates to: GWPGICREALSF*FSSSCLTSSYT Trigger: GGTGTATGAAGATGTCAAGCAGGAACTAGAGAAGCAAAATGACAGGGCTTCTCTGCATATCCCTGGCCATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159572.9 |
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| CDS TCA 72 bp | TGCTTCTCTAGTTCCTGCTTGACATCTTCATACACCTaGGAGAAGAGGTCCTCTTCAGACCTTGTTCCATCC | + |
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Preference number: 6 (lower is better) Translates to: CFSSSCLTSSYT*EKRSSSDLVPS Trigger: GGATGGAACAAGGTCTGAAGAGGACCTCTTCTCTCAGGTGTATGAAGATGTCAAGCAGGAACTAGAGAAGCA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042392.14 ENSMUST00000159572.9 ENSMUST00000237347.2 |
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