Pregenerated sensors for NMRAL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063445Ensembl transcript IDs: ENSMUST00000074970.8, ENSMUST00000079130.14, ENSMUST00000115851.10, ENSMUST00000120056.8
Found 161 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACACTCAGGGGTGTTGCCTCCCAGTGCATGCACAATGCTCAGGGTTaGGAGTCGAGTAAGTACTTCATGACTTTAAACACACCAAGTAAG | + |
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Preference number: 1 (lower is better) Translates to: TLRGVASQCMHNAQG*ESSKYFMTLNTPSK Trigger: CTTACTTGGTGTGTTTAAAGTCATGAAGTACTTACTCGACTCTCAACCCTGAGCATTGTGCATGCACTGGGAGGCAACACCCCTGAGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR TCA 90 bp | GCAGCTATTGGCTGCTGGCATCTTTATTTACCAGTCAGAATTAACTaGAGGCAGGTTCCCAGAAGCTCCTTGCAGACTCCAAATCTTGGA | + |
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Preference number: 1 (lower is better) Translates to: AAIGCWHLYLPVRIN*RQVPRSSLQTPNLG Trigger: TCCAAGATTTGGAGTCTGCAAGGAGCTTCTGGGAACCTGCCTTCAGTTAATTCTGACTGGTAAATAAAGATGCCAGCAGCCAATAGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR CCA 90 bp | CCTATCGTGCAAGTCTTAGCCACAGGCACCATTACCTCAAGTCCATaGCTCTGCCACATCTTTGTTTGTTCAATTTTAATCCGCCTCAAG | + |
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Preference number: 1 (lower is better) Translates to: PIVQVLATGTITSSP*LCHIFVCSILIRLK Trigger: CTTGAGGCGGATTAAAATTGAACAAACAAAGATGTGGCAGAGCCATGGACTTGAGGTAATGGTGCCTGTGGCTAAGACTTGCACGATAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR CCA 90 bp | GTTCACAGAGGTATCATGAAATCTCAGCAAGTGACTTGGGTTTTCTaGGCCTTTGTTACTCCCTCTGAAAAGCTTAGAGCTAAGTTGACC | + |
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Preference number: 1 (lower is better) Translates to: VHRGIMKSQQVTWVF*AFVTPSEKLRAKLT Trigger: GGTCAACTTAGCTCTAAGCTTTTCAGAGGGAGTAACAAAGGCCCAGAAAACCCAAGTCACTTGCTGAGATTTCATGATACCTCTGTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGTTCTTCCAGAGGCCTGTGGTCCTGCCTaGCTGGGGGTATTCAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: PGAGEMAQWLRALTVLPEACGPA*LGVFRG Trigger: ACCCCTGAATACCCCCAGGCAGGCAGGACCACAGGC...CTCTGGAAGAACAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR CAA 90 bp | TGGCTGCTCTTGACCCAACTGAGCAGCCCTCTGGGCCGCATTCTCTaGGCTCCTTTATGTGATGGCTCTGGTTTCTCCCTCCTTCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: WLLLTQLSSPLGRIL*APLCDGSGFSLLPS Trigger: GGAGGGAAGGAGGGAGAAACCAGAGCCATCACATAAAGGAGCCAAGAGAATGCGGCCCAGAGGGCTGCTCAGTTGGGTCAAGAGCAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGTTCTTCCAGAGCAGGGCCCATTTTCATaGAGCTGCCCCTCCAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: PGAGEMAQWLRALTVLPEQGPFS*SCPSSS Trigger: TGAGCTGGAGGGGCAGCTGCATGAAAATGGGCCCTG...CTCTGGAAGAACAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR CCA 90 bp | CCATGGCTCTGCCACATCTTTGTTTGTTCAATTTTAATCCGCCTCAAGCAGCACTGGCCTCAGTGCCTGTaGTCCTGCCTGCCTGGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: PWLCHIFVCSILIRLKQHWPQCL*SCLPGG Trigger: ACCCCCAGGCAGGCAGGACCACAGGCACTGAGGCCA...GTGCTGCTTGAGGCGGATTAAAATTGAACAAACAAAGATGTGGCAGAGCCATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR GCA 90 bp | ACCCCACCTCTCTCTTCTTCGCAGCTATTGGCTGCTGGCATCTTTATTTACCAGGGTGTTGCCTCCCAGTaGATGCACAATGCTCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: TPPLSSSQLLAAGIFIYQGVASQ*MHNAQG Trigger: ACCCTGAGCATTGTGCATGCACTGGGAGGCAACACC...CTGGTAAATAAAGATGCCAGCAGCCAATAGCTGCGAAGAAGAGAGAGGTGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGTTCTTCCAGAGTTCCCAGAAGCTCCTTaGAGACTCCAAATCTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: PGAGEMAQWLRALTVLPEFPEAP*RLQILE Trigger: CTCCAAGATTTGGAGTCTGCAAGGAGCTTCTGGGAA...CTCTGGAAGAACAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTCCATGGTAGATGAACCTGATGGAACCACTGTTCCTTTCCCTGCTAGAGGACACCCTCCTAAGGCATaGCTCCTCTCTTCTCCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: ESMVDEPDGTTVPFPARGHPPKA*LLSSPS Trigger: GGAAGGAGAAGAGAGGAGCCATGCCTTAGGAGGGTG...TCCTCTAGCAGGGAAAGGAACAGTGGTTCCATCAGGTTCATCTACCATGGACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGGGCCTAACCTCCACGCTGCTGCAATCACCTCCCACCCAGAACTCCGAGTTAAAGAGTGTTTGTTGTaGTTGTTGTCCCTACAAATG | + |
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Preference number: 2 (lower is better) Translates to: AGPNLHAAAITSHPELRVKECLL*LLSLQM Trigger: CATTTGTAGGGACAACAAGCACAACAAACACTCTTT...AACTCGGAGTTCTGGGTGGGAGGTGATTGCAGCAGCGTGGAGGTTAGGCCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGGGCCTAACCTCCACGCTGCTGCAATCACCTCCCACCCAGAACTCCGAGTTCTATTCCAGTTTTGTTaGTTTTGTTTGTGTGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: AGPNLHAAAITSHPELRVLFQFC*FCLCGL Trigger: GAGACCACACAAACAAAACCAACAAAACTGGAATAG...AACTCGGAGTTCTGGGTGGGAGGTGATTGCAGCAGCGTGGAGGTTAGGCCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR CCA 90 bp | TCGCAGCTATTGGCTGCTGGCATCTTTATTTACCAGTCAGAATTAACTGAAGGCGTGGTCCTGCCTGCCTaGGGGTATTCAGGGGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: SQLLAAGIFIYQSELTEGVVLPA*GYSGVS Trigger: TGACACCCCTGAATACCCCCAGGCAGGCAGGACCAC...GCCTTCAGTTAATTCTGACTGGTAAATAAAGATGCCAGCAGCCAATAGCTGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGCTAAGTTGACCTATCGTGCAAGTCTTAGCCACAGGCACCATTACCTCAAGTGGGCCGCATTCTCTTaGCTCCTTTATGTGATGGCT | + |
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Preference number: 2 (lower is better) Translates to: RAKLTYRASLSHRHHYLKWAAFS*LLYVMA Trigger: AGCCATCACATAAAGGAGCCAAGAGAATGCGGCCCA...CTTGAGGTAATGGTGCCTGTGGCTAAGACTTGCACGATAGGTCAACTTAGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTCCATGGTAGATGAACCTGATGGAACCACTGTTCCTTTCCCTGCTAGAGGATTTCTGTGTCCATCTTaGCTGCTCTTGACCCAACTG | + |
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Preference number: 2 (lower is better) Translates to: ESMVDEPDGTTVPFPARGFLCPS*LLLTQL Trigger: CAGTTGGGTCAAGAGCAGCCAAGATGGACACAGAAA...TCCTCTAGCAGGGAAAGGAACAGTGGTTCCATCAGGTTCATCTACCATGGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGTTGTGCTTGTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCAAAGTCTCTGGGCTTTGGGGTTaGGTCGCAGGGTCAGATGAA | + |
|
Preference number: 2 (lower is better) Translates to: FVVLVVPTNASRSQLCKVSGLWG*VAGSDE Trigger: TTCATCTGACCCTGCGACTCAACCCCAAAGCCCAGA...GACTTTGCACAGCTGTGATCTTGAAGCATTTGTAGGGACAACAAGCACAACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
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| 3UTR-3UTR GCA 90 bp | GCTTTAGTCTGTTTATCCCATATTTTAGGGTATGACACAGTAAATCGTTCCTCACACAGGTGGCCTCAGTaGCTGTGGTCCTGCCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: ALVCLSHILGYDTVNRSSHRWPQ*LWSCLP Trigger: AGGCAGGCAGGACCACAGGCACTGAGGCCACCTGTG...TGAGGAACGATTTACTGTGTCATACCCTAAAATATGGGATAAACAGACTAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGTTCTTCCAGAGAGAGGCCTTTTCTTTTaGGAAACCATTTGTGATAAC | + |
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Preference number: 2 (lower is better) Translates to: PGAGEMAQWLRALTVLPERGLFF*ETICDN Trigger: GTTATCACAAATGGTTTCCCAAAAGAAAAGGCCTCT...CTCTGGAAGAACAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR TCA 90 bp | ACTCCCTCTGAAAAGCTTAGAGCTAAGTTGACCTATCGTGCAAGTCTTAGCCACGTCAACAATTTAGAGTaGATGCACAGGTGGCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: TPSEKLRAKLTYRASLSHVNNLE*MHRWPQ Trigger: CTGAGGCCACCTGTGCATTCACTCTAAATTGTTGAC...GTGGCTAAGACTTGCACGATAGGTCAACTTAGCTCTAAGCTTTTCAGAGGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR CAA 90 bp | ATGACTTTAAACACACCAAGTAAGCCTGCGCCTCCTATTCCAGTTTaGTTGGTTTTGTTTGTGTGGTCTCAGGGCCCATTTTCATGCAGC | + |
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Preference number: 2 (lower is better) Translates to: MTLNTPSKPAPPIPV*LVLFVWSQGPFSCS Trigger: GCTGCATGAAAATGGGCCCTGAGACCACACAAACAAAACCAACAAAACTGGAATAGGAGGCGCAGGCTTACTTGGTGTGTTTAAAGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTTAGTCTGTTTATCCCATATTTTAGGGTATGACACAGTAAATCGTTCCTCATTCTTCCAGAGGTCCTaGGCTCAATTCCCAGCAACC | + |
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Preference number: 2 (lower is better) Translates to: ALVCLSHILGYDTVNRSSFFQRS*AQFPAT Trigger: GGTTGCTGGGAATTGAGCTCAGGACCTCTGGAAGAA...TGAGGAACGATTTACTGTGTCATACCCTAAAATATGGGATAAACAGACTAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCAAAGTCCCCTTTGTGAAAGAGTGTTTGTTGTaGTTGTTGTCCCTACAAATG | + |
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Preference number: 2 (lower is better) Translates to: LVVPTNASRSQLCKVPFVKECLL*LLSLQM Trigger: CATTTGTAGGGACAACAAGCACAACAAACACTCTTT...CACAAAGGGGACTTTGCACAGCTGTGATCTTGAAGCATTTGTAGGGACAACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
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| 3UTR-3UTR GCA 90 bp | TTAGTCTGTTTATCCCATATTTTAGGGTATGACACAGTAAATCGTTCCTCAGCCTCAAGTCCATGGCTCTaGCACATCTTTGTTTGTTCA | + |
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Preference number: 2 (lower is better) Translates to: LVCLSHILGYDTVNRSSASSPWL*HIFVCS Trigger: TGAACAAACAAAGATGTGGCAGAGCCATGGACTTGA...GGCTGAGGAACGATTTACTGTGTCATACCCTAAAATATGGGATAAACAGACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTTAGTCTGTTTATCCCATATTTTAGGGTATGACACAGTAAATCGTTCCTCATTGGTTTTGTTTGTGTaGTCTCAGGGCCCATTTTCA | + |
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Preference number: 2 (lower is better) Translates to: ALVCLSHILGYDTVNRSSLVLFV*SQGPFS Trigger: TGAAAATGGGCCCTGAGACCACACAAACAAAACCAA...TGAGGAACGATTTACTGTGTCATACCCTAAAATATGGGATAAACAGACTAAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR GCA 72 bp | GAATGCACAGGTGGCCTCAGTGCCTGTGGTCCTGCCTaGCTGGGGGTATTCAGGGGTGTCAAACACTCAGGG | + |
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Preference number: 3 (lower is better) Translates to: ECTGGLSACGPA*LGVFRGVKHSG Trigger: CCCTGAGTGTTTGACACCCCTGAATACCCCCAGGCAGGCAGGACCACAGGCACTGAGGCCACCTGTGCATTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR CAA 90 bp | GGGCTAGCTCTGGGGCTGGAACCAGGCTCTGAAGCCCAGGATCGGCTCCCCAGAGGTGACGTAGATGTCTaGACTCAGCATTTCCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: GLALGLEPGSEAQDRLPRGDVDV*TQHFPG Trigger: TCCTGGGAAATGCTGAGTCAAGACATCTACGTCACC...TCTGGGGAGCCGATCCTGGGCTTCAGAGCCTGGTTCCAGCCCCAGAGCTAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074970.8 |
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| 3UTR GCA 72 bp | CTTCAAGATCACAGCTGTGCAAAGTCCCCTTTGTGCTaGTCCAGCCACTGGTCCAGTGTCTGGGCTTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: LQDHSCAKSPLC*SSHWSSVWALG Trigger: CCCCAAAGCCCAGACACTGGACCAGTGGCTGGAGCAGCACAAAGGGGACTTTGCACAGCTGTGATCTTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
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| 3UTR-3UTR CAA 90 bp | GTTGTGCTTGTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCAAAGTCCCCTCCAGTGTCTGGGCTTaGGGGTTGAGTCGCAGGGTC | + |
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Preference number: 3 (lower is better) Translates to: VVLVVPTNASRSQLCKVPSSVWA*GLSRRV Trigger: GACCCTGCGACTCAACCCCAAAGCCCAGACACTGGA...GGGGACTTTGCACAGCTGTGATCTTGAAGCATTTGTAGGGACAACAAGCACAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
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| 3UTR GCA 72 bp | GGTGTCAAACACTCAGGGGTGTTGCCTCCCAGTGCATaGACAATGCTCAGGGTTGAGAGTCGAGTAAGTACT | + |
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Preference number: 3 (lower is better) Translates to: GVKHSGVLPPSA*TMLRVESRVST Trigger: AGTACTTACTCGACTCTCAACCCTGAGCATTGTGCATGCACTGGGAGGCAACACCCCTGAGTGTTTGACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR CAA 90 bp | GTTAAGAGCACTGACTGTTCTTCCAGAGGTCCTGAGCTCAATTCCCAGCAACCAAAACACTCAGGGGTGTaGCCTCCCAGTGCATGCACA | + |
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Preference number: 3 (lower is better) Translates to: VKSTDCSSRGPELNSQQPKHSGV*PPSACT Trigger: TGTGCATGCACTGGGAGGCAACACCCCTGAGTGTTT...TGGTTGCTGGGAATTGAGCTCAGGACCTCTGGAAGAACAGTCAGTGCTCTTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR TCA 72 bp | AGAGGTCCTGAGCTCAATTCCCAGCAACCACAGATCTaGTGCCCTCTTCTGGTGTGTCTGAAGACAGCGATA | + |
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Preference number: 3 (lower is better) Translates to: RGPELNSQQPQI*CPLLVCLKTAI Trigger: TATCGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCTGTGGTTGCTGGGAATTGAGCTCAGGACCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR CAA 90 bp | CCAGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGTTCTTCCAGAGCCTCCTATTCCAGTTTaGTTGGTTTTGTTTGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: PGAGEMAQWLRALTVLPEPPIPV*LVLFVW Trigger: CCACACAAACAAAACCAACAAAACTGGAATAGGAGG...CTCTGGAAGAACAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR CAA 90 bp | CCAGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGTTCTTCCAGAGAAGCTTAGAGCTAAGTaGACCTATCGTGCAAGTCTT | + |
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Preference number: 3 (lower is better) Translates to: PGAGEMAQWLRALTVLPEKLRAK*TYRASL Trigger: AAGACTTGCACGATAGGTCAACTTAGCTCTAAGCTT...CTCTGGAAGAACAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR CAA 90 bp | CAACAATTTAGAGTGAATGCACAGGTGGCCTCAGTGCCTGTGGTCCTGCCTGCCTACAAGAAAGAGTGTTaGTTGTGCTTGTTGTCCCTA | + |
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Preference number: 3 (lower is better) Translates to: QQFRVNAQVASVPVVLPAYKKEC*LCLLSL Trigger: TAGGGACAACAAGCACAACAAACACTCTTTCTTGTA...GGCAGGCAGGACCACAGGCACTGAGGCCACCTGTGCATTCACTCTAAATTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR CAA 90 bp | GAGTCCATGGTAGATGAACCTGATGGAACCACTGTTCCTTTCCCTGCTAGAGGATCTTCTTCGCAGCTATaGGCTGCTGGCATCTTTATT | + |
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Preference number: 3 (lower is better) Translates to: ESMVDEPDGTTVPFPARGSSSQL*AAGIFI Trigger: AATAAAGATGCCAGCAGCCAATAGCTGCGAAGAAGA...TCCTCTAGCAGGGAAAGGAACAGTGGTTCCATCAGGTTCATCTACCATGGACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR CAA 90 bp | TGTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCAAAGTCCCCTTTGTGCTGAGTGTTTGTTGTGCTaGTTGTCCCTACAAATGCTT | + |
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Preference number: 3 (lower is better) Translates to: CCPYKCFKITAVQSPLCAECLLC*LSLQML Trigger: AAGCATTTGTAGGGACAACAAGCACAACAAACACTC...AGCACAAAGGGGACTTTGCACAGCTGTGATCTTGAAGCATTTGTAGGGACAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
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| 3UTR-3UTR CAA 90 bp | GGCATCTTTATTTACCAGTCAGAATTAACTGAAGGCAGGTTCCCAGAAGCTCCTTTTTGTTGGTTTTGTTaGTGTGGTCTCAGGGCCCAT | + |
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Preference number: 3 (lower is better) Translates to: GIFIYQSELTEGRFPEAPFCWFC*CGLRAH Trigger: ATGGGCCCTGAGACCACACAAACAAAACCAACAAAA...AGGAGCTTCTGGGAACCTGCCTTCAGTTAATTCTGACTGGTAAATAAAGATGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR CAA 90 bp | GGCATCTTTATTTACCAGTCAGAATTAACTGAAGGCAGGTTCCCAGAAGCTCCTGAGTGTTTGTTGTGCTaGTTGTCCCTACAAATGCTT | + |
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Preference number: 3 (lower is better) Translates to: GIFIYQSELTEGRFPEAPECLLC*LSLQML Trigger: AAGCATTTGTAGGGACAACAAGCACAACAAACACTC...AGGAGCTTCTGGGAACCTGCCTTCAGTTAATTCTGACTGGTAAATAAAGATGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR CAA 90 bp | TGTTGTGCTTGTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCAAAGTCCCTACAAGAAAGAGTGTTaGTTGTGCTTGTTGTCCCTA | + |
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Preference number: 3 (lower is better) Translates to: CCACCPYKCFKITAVQSPYKKEC*LCLLSL Trigger: TAGGGACAACAAGCACAACAAACACTCTTTCTTGTA...GGGACTTTGCACAGCTGTGATCTTGAAGCATTTGTAGGGACAACAAGCACAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
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| 3UTR GCA 72 bp | AGAAAGAGTGTTTGTTGTGCTTGTTGTCCCTACAAATaGTTCAAGATCACAGCTGTGCAAAGTCCCCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: RKSVCCACCPYK*FKITAVQSPLC Trigger: ACAAAGGGGACTTTGCACAGCTGTGATCTTGAAGCATTTGTAGGGACAACAAGCACAACAAACACTCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
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| 3UTR CCA 72 bp | CAAGTCTTAGCCACAGGCACCATTACCTCAAGTCCATaGCTCTGCCACATCTTTGTTTGTTCAATTTTAATC | + |
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Preference number: 3 (lower is better) Translates to: QVLATGTITSSP*LCHIFVCSILI Trigger: GATTAAAATTGAACAAACAAAGATGTGGCAGAGCCATGGACTTGAGGTAATGGTGCCTGTGGCTAAGACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR-3UTR CAA 90 bp | TTAGTCTGTTTATCCCATATTTTAGGGTATGACACAGTAAATCGTTCCTCAGCCCTGCCACATCTTTGTTaGTTCAATTTTAATCCGCCT | + |
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Preference number: 3 (lower is better) Translates to: LVCLSHILGYDTVNRSSALPHLC*FNFNPP Trigger: AGGCGGATTAAAATTGAACAAACAAAGATGTGGCAG...GGCTGAGGAACGATTTACTGTGTCATACCCTAAAATATGGGATAAACAGACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR GCA 72 bp | AAACACAGAACTGTATACAAGAAAGAGTGTTTGTTGTaGTTGTTGTCCCTACAAATGCTTCAAGATCACAGC | + |
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Preference number: 3 (lower is better) Translates to: KHRTVYKKECLL*LLSLQMLQDHS Trigger: GCTGTGATCTTGAAGCATTTGTAGGGACAACAAGCACAACAAACACTCTTTCTTGTATACAGTTCTGTGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
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| CDS-3UTR GCA 90 bp | CCTGGGCTAGCTCTGGGGCTGGAACCAGGCTCTGAAGCCCAGGATCGGCTCCCCTACTCCTCTGCGGTGTaGCTGCAGGTACTGAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: PGLALGLEPGSEAQDRLPYSSAV*LQVLSP Trigger: CGGGCTCAGTACCTGCAGGCACACCGCAGAGGAGTA...GGGGAGCCGATCCTGGGCTTCAGAGCCTGGTTCCAGCCCCAGAGCTAGCCCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074970.8 |
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| CDS-3UTR TCA 90 bp | CCTGGGCTAGCTCTGGGGCTGGAACCAGGCTCTGAAGCCCAGGATCGGCTCCCCTGTGCCTGCAGGTACTaGGCCCGATGTTCTGCCCTA | + |
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Preference number: 4 (lower is better) Translates to: PGLALGLEPGSEAQDRLPCACRY*ARCSAL Trigger: TAGGGCAGAACATCGGGCTCAGTACCTGCAGGCACA...GGGGAGCCGATCCTGGGCTTCAGAGCCTGGTTCCAGCCCCAGAGCTAGCCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074970.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGGCTAGCTCTGGGGCTGGAACCAGGCTCTGAAGCCCAGGATCGGCTCCCCCCTCCACCTCCCCTTTaGCATCAAAGTGTCCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PGLALGLEPGSEAQDRLPPPPPL*HQSVLR Trigger: CCGCAGGACACTTTGATGGCAAAGGGGAGGTGGAGG...GGGGAGCCGATCCTGGGCTTCAGAGCCTGGTTCCAGCCCCAGAGCTAGCCCAGG 64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000074970.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGGCTAGCTCTGGGGCTGGAACCAGGCTCTGAAGCCCAGGATCGGCTCCCCGCTGCTTCAGCTCTTTaGCTGCCCTCTGCTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGLALGLEPGSEAQDRLPAASAL*LPSAQG Trigger: ACCCTGAGCAGAGGGCAGCCAAAGAGCTGAAGCAGC...GGGGAGCCGATCCTGGGCTTCAGAGCCTGGTTCCAGCCCCAGAGCTAGCCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074970.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGGCTAGCTCTGGGGCTGGAACCAGGCTCTGAAGCCCAGGATCGGCTCCCCACAATGAAGGTGGCATaGGCTCCAGCCAAGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGLALGLEPGSEAQDRLPTMKVA*APAKAS Trigger: GCTGGCCTTGGCTGGAGCCCATGCCACCTTCATTGT...GGGGAGCCGATCCTGGGCTTCAGAGCCTGGTTCCAGCCCCAGAGCTAGCCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074970.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGGCTAGCTCTGGGGCTGGAACCAGGCTCTGAAGCCCAGGATCGGCTCCCCCTGAGCCCGATGTTCTaGCCTACGTACTCTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGLALGLEPGSEAQDRLPLSPMF*PTYSSG Trigger: GCCAGAAGAGTACGTAGGGCAGAACATCGGGCTCAG...GGGGAGCCGATCCTGGGCTTCAGAGCCTGGTTCCAGCCCCAGAGCTAGCCCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074970.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGGCTAGCTCTGGGGCTGGAACCAGGCTCTGAAGCCCAGGATCGGCTCCCCCACCTTGCGCACCTGTaGCTCCAAAAACCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: PGLALGLEPGSEAQDRLPHLAHL*LQKPPP Trigger: TGGTGGTGGTTTTTGGAGCCACAGGTGCGCAAGGTG...GGGGAGCCGATCCTGGGCTTCAGAGCCTGGTTCCAGCCCCAGAGCTAGCCCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000074970.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGGCTAGCTCTGGGGCTGGAACCAGGCTCTGAAGCCCAGGATCGGCTCCCCCTTCAGCTCTTTGGCTaGCCTCTGCTCAGGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGLALGLEPGSEAQDRLPLQLFG*PLLRVS Trigger: AGAAACCCTGAGCAGAGGGCAGCCAAAGAGCTGAAG...GGGGAGCCGATCCTGGGCTTCAGAGCCTGGTTCCAGCCCCAGAGCTAGCCCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074970.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTAGCTCTGGGGCTGGAACCAGGCTCTGAAGCCCAGGATCGGCTCCCCAGAAAGGCAGCCGCACACTaGTCATGGGAACACCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GLALGLEPGSEAQDRLPRKAAAH*SWEHRC Trigger: ACATCGGTGTTCCCATGACCAGTGTGCGGCTGCCTT...TCTGGGGAGCCGATCCTGGGCTTCAGAGCCTGGTTCCAGCCCCAGAGCTAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074970.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTAGCTCTGGGGCTGGAACCAGGCTCTGAAGCCCAGGATCGGCTCCCCAGAACTACCTCAGCACCTTaGTGCTTCAGCTCTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLALGLEPGSEAQDRLPRTTSAP*CFSSLA Trigger: AGCCAAAGAGCTGAAGCAGCAAGGTGCTGAGGTAGT...TCTGGGGAGCCGATCCTGGGCTTCAGAGCCTGGTTCCAGCCCCAGAGCTAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074970.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGGCTAGCTCTGGGGCTGGAACCAGGCTCTGAAGCCCAGGATCGGCTCCCCGAAGCTTTTTCCATCTaGAGCTTTCTGGGGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PGLALGLEPGSEAQDRLPEAFSI*SFLGQE Trigger: TTCCTGCCCCAGAAAGCTGCAGATGGAAAAAGCTTC...GGGGAGCCGATCCTGGGCTTCAGAGCCTGGTTCCAGCCCCAGAGCTAGCCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000074970.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGGCCTAACCTCCACGCTGCTGCAATCACCTCCCACCCAGAACTCCGAGTTCTTCTCGGTCCTGGCTaGACGTCTCCCAGTAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGPNLHAAAITSHPELRVLLGPG*TSPSNW Trigger: CCAATTACTGGGAGACGTGCAGCCAGGACCGAGAAG...AACTCGGAGTTCTGGGTGGGAGGTGATTGCAGCAGCGTGGAGGTTAGGCCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGGCCTAACCTCCACGCTGCTGCAATCACCTCCCACCCAGAACTCCGAGTTGGAGTTGTCTTGGCATaGTGTACAGCCTTGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGPNLHAAAITSHPELRVGVVLA*CTALPV Trigger: CACTGGCAAGGCTGTACATCATGCCAAGACAACTCC...AACTCGGAGTTCTGGGTGGGAGGTGATTGCAGCAGCGTGGAGGTTAGGCCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGTTCTTCCAGAGGCCATCAAAGTGTCCTaGGGCCAGCTTCCCAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: PGAGEMAQWLRALTVLPEAIKVS*GQLPSR Trigger: ACGGCTGGGAAGCTGGCCGCAGGACACTTTGATGGC...CTCTGGAAGAACAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
||
| CDS-3UTR TCA 90 bp | CAACAATTTAGAGTGAATGCACAGGTGGCCTCAGTGCCTGTGGTCCTGCCTGCCATGTTGGCCAAGTCTTaGGCCCCCTGGAAACCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QQFRVNAQVASVPVVLPAMLAKS*APWKPS Trigger: ACTTGGTTTCCAGGGGGCTCAAGACTTGGCCAACAT...GGCAGGCAGGACCACAGGCACTGAGGCCACCTGTGCATTCACTCTAAATTGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
||
| CDS-3UTR TCA 90 bp | ATTCAGGGGTGTCAAACACTCAGGGGTGTTGCCTCCCAGTGCATGCACAATGCTTCTGGGCTTTGGGGTTaGGTCGCAGGGTCAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: IQGCQTLRGVASQCMHNASGLWG*VAGSDE Trigger: TTCATCTGACCCTGCGACTCAACCCCAAAGCCCAGA...AGCATTGTGCATGCACTGGGAGGCAACACCCCTGAGTGTTTGACACCCCTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
||
| CDS-3UTR GCA 90 bp | TGTTCTATAGGTAAGAGACAGGTCATGGAATGTGTCCAGGCTCCTGGGCTAGCTGCCATCAAAGTGTCCTaGGGCCAGCTTCCCAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: CSIGKRQVMECVQAPGLAAIKVS*GQLPSR Trigger: ACGGCTGGGAAGCTGGCCGCAGGACACTTTGATGGC...AGCTAGCCCAGGAGCCTGGACACATTCCATGACCTGTCTCTTACCTATAGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074970.8 |
||
| CDS-3UTR CCA 90 bp | TCTATAGGTAAGAGACAGGTCATGGAATGTGTCCAGGCTCCTGGGCTAGCTCTGGCCGCACACTGGTCATaGGAACACCGATGTCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SIGKRQVMECVQAPGLALAAHWS*EHRCLG Trigger: TCCGAGACATCGGTGTTCCCATGACCAGTGTGCGGC...CAGAGCTAGCCCAGGAGCCTGGACACATTCCATGACCTGTCTCTTACCTATAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074970.8 |
||
| CDS-3UTR GCA 90 bp | AGAGCTAAGTTGACCTATCGTGCAAGTCTTAGCCACAGGCACCATTACCTCAAGTACTCCTCTGCGGTGTaGCTGCAGGTACTGAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RAKLTYRASLSHRHHYLKYSSAV*LQVLSP Trigger: CGGGCTCAGTACCTGCAGGCACACCGCAGAGGAGTA...CTTGAGGTAATGGTGCCTGTGGCTAAGACTTGCACGATAGGTCAACTTAGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
||
| CDS-3UTR TCA 90 bp | GTTGTGCTTGTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCAAAGTCCCCTGTGCCTGCAGGTACTaGGCCCGATGTTCTGCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: VVLVVPTNASRSQLCKVPCACRY*ARCSAL Trigger: TAGGGCAGAACATCGGGCTCAGTACCTGCAGGCACA...GGGGACTTTGCACAGCTGTGATCTTGAAGCATTTGTAGGGACAACAAGCACAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
||
| CDS-3UTR GCA 90 bp | TGTTCTATAGGTAAGAGACAGGTCATGGAATGTGTCCAGGCTCCTGGGCTAGCTCTTCTCGGTCCTGGCTaGACGTCTCCCAGTAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: CSIGKRQVMECVQAPGLALLGPG*TSPSNW Trigger: CCAATTACTGGGAGACGTGCAGCCAGGACCGAGAAG...AGCTAGCCCAGGAGCCTGGACACATTCCATGACCTGTCTCTTACCTATAGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074970.8 |
||
| CDS-3UTR GCA 90 bp | GTTGTGCTTGTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCAAAGTCCCCCCTCCACCTCCCCTTTaGCATCAAAGTGTCCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VVLVVPTNASRSQLCKVPPPPPL*HQSVLR Trigger: CCGCAGGACACTTTGATGGCAAAGGGGAGGTGGAGG...GGGGACTTTGCACAGCTGTGATCTTGAAGCATTTGTAGGGACAACAAGCACAAC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
||
| CDS-3UTR GCA 90 bp | CAACAATTTAGAGTGAATGCACAGGTGGCCTCAGTGCCTGTGGTCCTGCCTGCCGAAGCTTTTTCCATCTaGAGCTTTCTGGGGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QQFRVNAQVASVPVVLPAEAFSI*SFLGQE Trigger: TTCCTGCCCCAGAAAGCTGCAGATGGAAAAAGCTTC...GGCAGGCAGGACCACAGGCACTGAGGCCACCTGTGCATTCACTCTAAATTGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
||
| CDS-3UTR GCA 90 bp | CTTGTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCAAAGTCCCCTTTGTGTACTCCTCTGCGGTGTaGCTGCAGGTACTGAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LVVPTNASRSQLCKVPFVYSSAV*LQVLSP Trigger: CGGGCTCAGTACCTGCAGGCACACCGCAGAGGAGTA...CACAAAGGGGACTTTGCACAGCTGTGATCTTGAAGCATTTGTAGGGACAACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
||
| CDS-3UTR CCA 90 bp | GTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCAAAGTCCCCTTTGTGCTGACAATGAAGGTGGCATaGGCTCCAGCCAAGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VVPTNASRSQLCKVPFVLTMKVA*APAKAS Trigger: GCTGGCCTTGGCTGGAGCCCATGCCACCTTCATTGT...CAGCACAAAGGGGACTTTGCACAGCTGTGATCTTGAAGCATTTGTAGGGACAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
||
| CDS-3UTR CCA 90 bp | GTTGTGCTTGTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCAAAGTCCCCGCCGCACACTGGTCATaGGAACACCGATGTCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VVLVVPTNASRSQLCKVPAAHWS*EHRCLG Trigger: TCCGAGACATCGGTGTTCCCATGACCAGTGTGCGGC...GGGGACTTTGCACAGCTGTGATCTTGAAGCATTTGTAGGGACAACAAGCACAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
||
| CDS-3UTR CCA 90 bp | TGTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCAAAGTCCCCTTTGTGCTGCTGCTTCAGCTCTTTaGCTGCCCTCTGCTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CCPYKCFKITAVQSPLCAAASAL*LPSAQG Trigger: ACCCTGAGCAGAGGGCAGCCAAAGAGCTGAAGCAGC...AGCACAAAGGGGACTTTGCACAGCTGTGATCTTGAAGCATTTGTAGGGACAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
||
| CDS-3UTR CCA 90 bp | ACTCCCTCTGAAAAGCTTAGAGCTAAGTTGACCTATCGTGCAAGTCTTAGCCACACAATGAAGGTGGCATaGGCTCCAGCCAAGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TPSEKLRAKLTYRASLSHTMKVA*APAKAS Trigger: GCTGGCCTTGGCTGGAGCCCATGCCACCTTCATTGT...GTGGCTAAGACTTGCACGATAGGTCAACTTAGCTCTAAGCTTTTCAGAGGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCTAAGTTGACCTATCGTGCAAGTCTTAGCCACAGGCACCATTACCTCAAGAAGGCAGCCGCACACTaGTCATGGGAACACCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: RAKLTYRASLSHRHHYLKKAAAH*SWEHRC Trigger: ACATCGGTGTTCCCATGACCAGTGTGCGGCTGCCTT...CTTGAGGTAATGGTGCCTGTGGCTAAGACTTGCACGATAGGTCAACTTAGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
||
| CDS-3UTR TCA 90 bp | TGTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCAAAGTCCCCTTTGTGCTCCTCTACAGCCTTGGTaGTGCCAGGAAGACTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CCPYKCFKITAVQSPLCAPLQPW*CQEDWL Trigger: AAGCCAGTCTTCCTGGCATCACCAAGGCTGTAGAGG...AGCACAAAGGGGACTTTGCACAGCTGTGATCTTGAAGCATTTGTAGGGACAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
||
| CDS-3UTR GCA 90 bp | TCGCAGCTATTGGCTGCTGGCATCTTTATTTACCAGTCAGAATTAACTGAAGGCCCTCCACCTCCCCTTTaGCATCAAAGTGTCCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SQLLAAGIFIYQSELTEGPPPPL*HQSVLR Trigger: CCGCAGGACACTTTGATGGCAAAGGGGAGGTGGAGG...GCCTTCAGTTAATTCTGACTGGTAAATAAAGATGCCAGCAGCCAATAGCTGCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
||
| CDS-3UTR CCA 90 bp | TGTTGTGCTTGTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCAAAGTCCCAAGGCAGCCGCACACTaGTCATGGGAACACCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: CCACCPYKCFKITAVQSPKAAAH*SWEHRC Trigger: ACATCGGTGTTCCCATGACCAGTGTGCGGCTGCCTT...GGGACTTTGCACAGCTGTGATCTTGAAGCATTTGTAGGGACAACAAGCACAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
||
| CDS-3UTR CCA 90 bp | TGTTCTATAGGTAAGAGACAGGTCATGGAATGTGTCCAGGCTCCTGGGCTAGCTCCCTACGTACTCTTCTaGCTTCTTCAGCAAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CSIGKRQVMECVQAPGLAPYVLF*LLQQAE Trigger: CTCAGCTTGCTGAAGAAGCCAGAAGAGTACGTAGGG...AGCTAGCCCAGGAGCCTGGACACATTCCATGACCTGTCTCTTACCTATAGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074970.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCACCTCTCTCTTCTTCGCAGCTATTGGCTGCTGGCATCTTTATTTACCAGCCCTACGTACTCTTCTaGCTTCTTCAGCAAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TPPLSSSQLLAAGIFIYQPYVLF*LLQQAE Trigger: CTCAGCTTGCTGAAGAAGCCAGAAGAGTACGTAGGG...CTGGTAAATAAAGATGCCAGCAGCCAATAGCTGCGAAGAAGAGAGAGGTGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
||
| CDS-3UTR TCA 90 bp | TCTATAGGTAAGAGACAGGTCATGGAATGTGTCCAGGCTCCTGGGCTAGCTCTGTTACCACTCGAATCCTaGATGTCCCATCTTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SIGKRQVMECVQAPGLALLPLES*MSHLLA Trigger: TGCTAGAAGATGGGACATTCAGGATTCGAGTGGTAA...CAGAGCTAGCCCAGGAGCCTGGACACATTCCATGACCTGTCTCTTACCTATAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074970.8 |
||
| CDS-3UTR TCA 90 bp | CTTGTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCAAAGTCCCCTTTGTGATGTTGGCCAAGTCTTaGGCCCCCTGGAAACCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVVPTNASRSQLCKVPFVMLAKS*APWKPS Trigger: ACTTGGTTTCCAGGGGGCTCAAGACTTGGCCAACAT...CACAAAGGGGACTTTGCACAGCTGTGATCTTGAAGCATTTGTAGGGACAACAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
||
| CDS-3UTR GCA 90 bp | AAAGAGTGTTTGTTGTGCTTGTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCCATCAAAGTGTCCTaGGGCCAGCTTCCCAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KECLLCLLSLQMLQDHSCAIKVS*GQLPSR Trigger: ACGGCTGGGAAGCTGGCCGCAGGACACTTTGATGGC...ACAGCTGTGATCTTGAAGCATTTGTAGGGACAACAAGCACAACAAACACTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
||
| CDS-3UTR GCA 90 bp | GGCATCTTTATTTACCAGTCAGAATTAACTGAAGGCAGGTTCCCAGAAGCTCCTCTGAGCCCGATGTTCTaGCCTACGTACTCTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GIFIYQSELTEGRFPEAPLSPMF*PTYSSG Trigger: GCCAGAAGAGTACGTAGGGCAGAACATCGGGCTCAG...AGGAGCTTCTGGGAACCTGCCTTCAGTTAATTCTGACTGGTAAATAAAGATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
||
| CDS-3UTR GCA 90 bp | TACTTCATGACTTTAAACACACCAAGTAAGCCTGCGCCTCCTATTCCAGTTTTGGCAAAGTCCCCTTTGTaGTGCTCCAGCCACTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YFMTLNTPSKPAPPIPVLAKSPL*CSSHWS Trigger: GGACCAGTGGCTGGAGCAGCACAAAGGGGACTTTGC...CAAAACTGGAATAGGAGGCGCAGGCTTACTTGGTGTGTTTAAAGTCATGAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
||
| CDS-3UTR CCA 90 bp | GTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCAAAGTCCCCTTTGTGCTGCCCTACGTACTCTTCTaGCTTCTTCAGCAAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VVPTNASRSQLCKVPFVLPYVLF*LLQQAE Trigger: CTCAGCTTGCTGAAGAAGCCAGAAGAGTACGTAGGG...CAGCACAAAGGGGACTTTGCACAGCTGTGATCTTGAAGCATTTGTAGGGACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
||
| 3UTR CAA 72 bp | AGTAAGCCTGCGCCTCCTATTCCAGTTTTGTTGGTTTaGTTTGTGTGGTCTCAGGGCCCATTTTCATGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKPAPPIPVLLV*FVWSQGPFSCS Trigger: GCTGCATGAAAATGGGCCCTGAGACCACACAAACAAAACCAACAAAACTGGAATAGGAGGCGCAGGCTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
||
| CDS-3UTR GCA 90 bp | GTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCAAAGTCCCCTTTGTGCTGGAAGCTTTTTCCATCTaGAGCTTTCTGGGGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VVPTNASRSQLCKVPFVLEAFSI*SFLGQE Trigger: TTCCTGCCCCAGAAAGCTGCAGATGGAAAAAGCTTC...CAGCACAAAGGGGACTTTGCACAGCTGTGATCTTGAAGCATTTGTAGGGACAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
||
| CDS-3UTR GCA 90 bp | GAAAGAGTGTTTGTTGTGCTTGTTGTCCCTACAAATGCTTCAAGATCACAGCTGCTGAGCCCGATGTTCTaGCCTACGTACTCTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ERVFVVLVVPTNASRSQLLSPMF*PTYSSG Trigger: GCCAGAAGAGTACGTAGGGCAGAACATCGGGCTCAG...CAGCTGTGATCTTGAAGCATTTGTAGGGACAACAAGCACAACAAACACTCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
||
| CDS-3UTR CCA 90 bp | GAAAGAGTGTTTGTTGTGCTTGTTGTCCCTACAAATGCTTCAAGATCACAGCTGCACCTTGCGCACCTGTaGCTCCAAAAACCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ERVFVVLVVPTNASRSQLHLAHL*LQKPPP Trigger: TGGTGGTGGTTTTTGGAGCCACAGGTGCGCAAGGTG...CAGCTGTGATCTTGAAGCATTTGTAGGGACAACAAGCACAACAAACACTCTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
||
| CDS-3UTR CCA 90 bp | TACCTCAAGTCCATGGCTCTGCCACATCTTTGTTTGTTCAATTTTAATCCGCCTCACCTTGCGCACCTGTaGCTCCAAAAACCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: YLKSMALPHLCLFNFNPPHLAHL*LQKPPP Trigger: TGGTGGTGGTTTTTGGAGCCACAGGTGCGCAAGGTG...AGGCGGATTAAAATTGAACAAACAAAGATGTGGCAGAGCCATGGACTTGAGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
||
| CDS-3UTR CCA 90 bp | TTAAACACACCAAGTAAGCCTGCGCCTCCTATTCCAGTTTTGTTGGTTTTGTTTGCCGCACACTGGTCATaGGAACACCGATGTCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LNTPSKPAPPIPVLLVLFAAHWS*EHRCLG Trigger: TCCGAGACATCGGTGTTCCCATGACCAGTGTGCGGC...AAACAAAACCAACAAAACTGGAATAGGAGGCGCAGGCTTACTTGGTGTGTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
||
| CDS-3UTR CCA 90 bp | TGTTGTGCTTGTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCAAAGTCCCTTCCTCCAGAGTCCTTaGCATGATGTACAGCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CCACCPYKCFKITAVQSPFLQSP*HDVQPC Trigger: GCAAGGCTGTACATCATGCCAAGGACTCTGGAGGAA...GGGACTTTGCACAGCTGTGATCTTGAAGCATTTGTAGGGACAACAAGCACAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
||
| CDS-3UTR GCA 90 bp | TTTGTTGTGCTTGTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCAAAGTCCTTCAGCTCTTTGGCTaGCCTCTGCTCAGGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FVVLVVPTNASRSQLCKVLQLFG*PLLRVS Trigger: AGAAACCCTGAGCAGAGGGCAGCCAAAGAGCTGAAG...GACTTTGCACAGCTGTGATCTTGAAGCATTTGTAGGGACAACAAGCACAACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
||
| CDS-3UTR GCA 90 bp | AAAGAGTGTTTGTTGTGCTTGTTGTCCCTACAAATGCTTCAAGATCACAGCTGTCTTCTCGGTCCTGGCTaGACGTCTCCCAGTAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: KECLLCLLSLQMLQDHSCLLGPG*TSPSNW Trigger: CCAATTACTGGGAGACGTGCAGCCAGGACCGAGAAG...ACAGCTGTGATCTTGAAGCATTTGTAGGGACAACAAGCACAACAAACACTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
||
| 3UTR CAA 72 bp | AACACACCAAGTAAGCCTGCGCCTCCTATTCCAGTTTaGTTGGTTTTGTTTGTGTGGTCTCAGGGCCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: NTPSKPAPPIPV*LVLFVWSQGPF Trigger: AAATGGGCCCTGAGACCACACAAACAAAACCAACAAAACTGGAATAGGAGGCGCAGGCTTACTTGGTGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| CDS-3UTR CCA 90 bp | GCTTTAGTCTGTTTATCCCATATTTTAGGGTATGACACAGTAAATCGTTCCTCATGCTGCTCCAGCCACTaGTCCAGTGTCTGGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ALVCLSHILGYDTVNRSSCCSSH*SSVWAL Trigger: CAAAGCCCAGACACTGGACCAGTGGCTGGAGCAGCA...TGAGGAACGATTTACTGTGTCATACCCTAAAATATGGGATAAACAGACTAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| CDS-3UTR CCA 90 bp | TGTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCAAAGTCCCCTTTGTGCTTCCTCAGGAGTTGTCTaGAAACAGAGAATCCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: CCPYKCFKITAVQSPLCASSGVV*KQRIHH Trigger: ATGGTGGATTCTCTGTTTCCAGACAACTCCTGAGGA...AGCACAAAGGGGACTTTGCACAGCTGTGATCTTGAAGCATTTGTAGGGACAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
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| CDS-3UTR GCA 90 bp | TTAGTCTGTTTATCCCATATTTTAGGGTATGACACAGTAAATCGTTCCTCAGCCCTTCAGCTCTTTGGCTaGCCTCTGCTCAGGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVCLSHILGYDTVNRSSALQLFG*PLLRVS Trigger: AGAAACCCTGAGCAGAGGGCAGCCAAAGAGCTGAAG...GGCTGAGGAACGATTTACTGTGTCATACCCTAAAATATGGGATAAACAGACTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAGTGTTTGTTGTGCTTGTTGTCCCTACAAATGCTTCAAGATCACAGCTGTACTACCTCAGCACCTTaGTGCTTCAGCTCTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KECLLCLLSLQMLQDHSCTTSAP*CFSSLA Trigger: AGCCAAAGAGCTGAAGCAGCAAGGTGCTGAGGTAGT...ACAGCTGTGATCTTGAAGCATTTGTAGGGACAACAAGCACAACAAACACTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
||
| CDS-3UTR TCA 90 bp | TTTGTTGTGCTTGTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCAAAGTCTTACCACTCGAATCCTaGATGTCCCATCTTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FVVLVVPTNASRSQLCKVLPLES*MSHLLA Trigger: TGCTAGAAGATGGGACATTCAGGATTCGAGTGGTAA...GACTTTGCACAGCTGTGATCTTGAAGCATTTGTAGGGACAACAAGCACAACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
||
| CDS-3UTR TCA 90 bp | TACCTCAAGTCCATGGCTCTGCCACATCTTTGTTTGTTCAATTTTAATCCGCCTTTACCACTCGAATCCTaGATGTCCCATCTTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YLKSMALPHLCLFNFNPPLPLES*MSHLLA Trigger: TGCTAGAAGATGGGACATTCAGGATTCGAGTGGTAA...AGGCGGATTAAAATTGAACAAACAAAGATGTGGCAGAGCCATGGACTTGAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| 3UTR CAA 72 bp | CACAGAACTGTATACAAGAAAGAGTGTTTGTTGTGCTaGTTGTCCCTACAAATGCTTCAAGATCACAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HRTVYKKECLLC*LSLQMLQDHSC Trigger: ACAGCTGTGATCTTGAAGCATTTGTAGGGACAACAAGCACAACAAACACTCTTTCTTGTATACAGTTCTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
||
| 3UTR CAA 72 bp | CCCAAACACAGAACTGTATACAAGAAAGAGTGTTTGTaGTGCTTGTTGTCCCTACAAATGCTTCAAGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: PKHRTVYKKECL*CLLSLQMLQDH Trigger: GTGATCTTGAAGCATTTGTAGGGACAACAAGCACAACAAACACTCTTTCTTGTATACAGTTCTGTGTTTGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
||
| 3UTR CAA 72 bp | AAACCCAAACACAGAACTGTATACAAGAAAGAGTGTTaGTTGTGCTTGTTGTCCCTACAAATGCTTCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KPKHRTVYKKEC*LCLLSLQMLQD Trigger: ATCTTGAAGCATTTGTAGGGACAACAAGCACAACAAACACTCTTTCTTGTATACAGTTCTGTGTTTGGGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
||
| CDS-3UTR CAA 90 bp | GGGCTAGCTCTGGGGCTGGAACCAGGCTCTGAAGCCCAGGATCGGCTCCCCAGAGGCCACAGAGCCACCTaGCGCACCTGTGGCTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GLALGLEPGSEAQDRLPRGHRAT*RTCGSK Trigger: TTTGGAGCCACAGGTGCGCAAGGTGGCTCTGTGGCC...TCTGGGGAGCCGATCCTGGGCTTCAGAGCCTGGTTCCAGCCCCAGAGCTAGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074970.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGGCTAGCTCTGGGGCTGGAACCAGGCTCTGAAGCCCAGGATCGGCTCCCCTGCTGCTTCAGCTCTTaGGCTGCCCTCTGCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGLALGLEPGSEAQDRLPCCFSS*AALCSG Trigger: CCCTGAGCAGAGGGCAGCCAAAGAGCTGAAGCAGCA...GGGGAGCCGATCCTGGGCTTCAGAGCCTGGTTCCAGCCCCAGAGCTAGCCCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074970.8 |
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| CDS-3UTR CAA 90 bp | CCTGGGCTAGCTCTGGGGCTGGAACCAGGCTCTGAAGCCCAGGATCGGCTCCCCTCCTCCACCTCCCCTTaGCCATCAAAGTGTCCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: PGLALGLEPGSEAQDRLPSSTSP*PSKCPA Trigger: CGCAGGACACTTTGATGGCAAAGGGGAGGTGGAGGA...GGGGAGCCGATCCTGGGCTTCAGAGCCTGGTTCCAGCCCCAGAGCTAGCCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000074970.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTAGCTCTGGGGCTGGAACCAGGCTCTGAAGCCCAGGATCGGCTCCCCAGAAGATCGGCTAGAAGCTaGCCCTGCTGCACTTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: GLALGLEPGSEAQDRLPRRSARS*PCCTSR Trigger: CCGAGAAGTGCAGCAGGGCAAGCTTCTAGCCGATCT...TCTGGGGAGCCGATCCTGGGCTTCAGAGCCTGGTTCCAGCCCCAGAGCTAGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074970.8 |
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| CDS CCA 90 bp | GCATGGGCTCCAGCCAAGGCCAGCTCCATGCTAGCTGCATCGTCCTaGTCTCCTCGCACTACCTCAGCACCTTGCTGCTTCAGCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: AWAPAKASSMLAASS*SPRTTSAPCCFSSL Trigger: CAAAGAGCTGAAGCAGCAAGGTGCTGAGGTAGTGCGAGGAGACCAGGACGATGCAGCTAGCATGGAGCTGGCCTTGGCTGGAGCCCATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
||
| CDS CCA 90 bp | GTGCCTGCAGGTACTGAGCCCGATGTTCTGCCCTACGTACTCTTCTaGCTTCTTCAGCAAGCTGAGCACCACGGGGCCCAGGTCACTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VPAGTEPDVLPYVLF*LLQQAEHHGAQVTH Trigger: GTGAGTGACCTGGGCCCCGTGGTGCTCAGCTTGCTGAAGAAGCCAGAAGAGTACGTAGGGCAGAACATCGGGCTCAGTACCTGCAGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS GCA 90 bp | AATGAAGGTGGCATGGGCTCCAGCCAAGGCCAGCTCCATGCTAGCTaGATCGTCCTGGTCTCCTCGCACTACCTCAGCACCTTGCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: NEGGMGSSQGQLHAS*IVLVSSHYLSTLLL Trigger: AAGCAGCAAGGTGCTGAGGTAGTGCGAGGAGACCAGGACGATGCAGCTAGCATGGAGCTGGCCTTGGCTGGAGCCCATGCCACCTTCATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS TCA 90 bp | GCCCGATGTTCTGCCCTACGTACTCTTCTGGCTTCTTCAGCAAGCTaGGCACCACGGGGCCCAGGTCACTCACAGACATTCCATCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: ARCSALRTLLASSAS*APRGPGHSQTFHPW Trigger: CCATGGATGGAATGTCTGTGAGTGACCTGGGCCCCGTGGTGCTCAGCTTGCTGAAGAAGCCAGAAGAGTACGTAGGGCAGAACATCGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS GCA 90 bp | GCATACTCCTCTGCGGTGTGCCTGCAGGTACTGAGCCCGATGTTCTaGCCTACGTACTCTTCTGGCTTCTTCAGCAAGCTGAGCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: AYSSAVCLQVLSPMF*PTYSSGFFSKLSTT Trigger: CGTGGTGCTCAGCTTGCTGAAGAAGCCAGAAGAGTACGTAGGGCAGAACATCGGGCTCAGTACCTGCAGGCACACCGCAGAGGAGTATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS GCA 90 bp | CTAGCTGCATCGTCCTGGTCTCCTCGCACTACCTCAGCACCTTGCTaGTTCAGCTCTTTGGCTGCCCTCTGCTCAGGGTTTCTTGTTACC | + |
|
Preference number: 5 (lower is better) Translates to: LAASSWSPRTTSAPC*FSSLAALCSGFLVT Trigger: GGTAACAAGAAACCCTGAGCAGAGGGCAGCCAAAGAGCTGAAGCAGCAAGGTGCTGAGGTAGTGCGAGGAGACCAGGACGATGCAGCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS GCA 90 bp | ATGCTAGCTGCATCGTCCTGGTCTCCTCGCACTACCTCAGCACCTTaGTGCTTCAGCTCTTTGGCTGCCCTCTGCTCAGGGTTTCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: MLAASSWSPRTTSAP*CFSSLAALCSGFLV Trigger: AACAAGAAACCCTGAGCAGAGGGCAGCCAAAGAGCTGAAGCAGCAAGGTGCTGAGGTAGTGCGAGGAGACCAGGACGATGCAGCTAGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS GCA 90 bp | TTGCCAGTGTGCTTGCTAAGCAAGGCAGCATACTCCTCTGCGGTGTaGCTGCAGGTACTGAGCCCGATGTTCTGCCCTACGTACTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPVCLLSKAAYSSAV*LQVLSPMFCPTYSS Trigger: AGAAGAGTACGTAGGGCAGAACATCGGGCTCAGTACCTGCAGGCACACCGCAGAGGAGTATGCTGCCTTGCTTAGCAAGCACACTGGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS GCA 90 bp | CTACATAATGGAGGCCCAAGCGTTTGGCTAGATCGGCTAGAAGCTTaGCCTGCTGCACTTCTCGGTCCTGGCTGCACGTCTCCCAGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: LHNGGPSVWLDRLEA*PAALLGPGCTSPSN Trigger: ATTACTGGGAGACGTGCAGCCAGGACCGAGAAGTGCAGCAGGGCAAGCTTCTAGCCGATCTAGCCAAACGCTTGGGCCTCCATTATGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074970.8 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS CCA 90 bp | GGCCCAGGTCACTCACAGACATTCCATCCATGGGGACGTCACCCATaGGCAAGTCCAGCAAGAAGCTTTTTCCATCTGCAGCTTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GPGHSQTFHPWGRHP*ASPARSFFHLQLSG Trigger: CCCAGAAAGCTGCAGATGGAAAAAGCTTCTTGCTGGACTTGCCCATGGGTGACGTCCCCATGGATGGAATGTCTGTGAGTGACCTGGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS-3UTR CAA 90 bp | ACCCCACCTCTCTCTTCTTCGCAGCTATTGGCTGCTGGCATCTTTATTTACCAGGGCCACAGAGCCACCTaGCGCACCTGTGGCTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TPPLSSSQLLAAGIFIYQGHRAT*RTCGSK Trigger: TTTGGAGCCACAGGTGCGCAAGGTGGCTCTGTGGCC...CTGGTAAATAAAGATGCCAGCAGCCAATAGCTGCGAAGAAGAGAGAGGTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| CDS CCA 90 bp | TGTTCTCCAGGCCACTGTACACTACATAATGGAGGCCCAAGCGTTTaGCTAGATCGGCTAGAAGCTTGCCCTGCTGCACTTCTCGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CSPGHCTLHNGGPSV*LDRLEACPAALLGP Trigger: AGGACCGAGAAGTGCAGCAGGGCAAGCTTCTAGCCGATCTAGCCAAACGCTTGGGCCTCCATTATGTAGTGTACAGTGGCCTGGAGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074970.8 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS-3UTR CAA 90 bp | GTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCAAAGTCCCCTTTGTGCTGGGCCACAGAGCCACCTaGCGCACCTGTGGCTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VVPTNASRSQLCKVPFVLGHRAT*RTCGSK Trigger: TTTGGAGCCACAGGTGCGCAAGGTGGCTCTGTGGCC...CAGCACAAAGGGGACTTTGCACAGCTGTGATCTTGAAGCATTTGTAGGGACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
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| CDS TCA 90 bp | CTTTGGCTGCCCTCTGCTCAGGGTTTCTTGTTACCACTCGAATCCTaGATGTCCCATCTTCTAGCAATGCACGGGCCACAGAGCCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: LWLPSAQGFLLPLES*MSHLLAMHGPQSHL Trigger: AAGGTGGCTCTGTGGCCCGTGCATTGCTAGAAGATGGGACATTCAGGATTCGAGTGGTAACAAGAAACCCTGAGCAGAGGGCAGCCAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS GCA 90 bp | CGCACTACCTCAGCACCTTGCTGCTTCAGCTCTTTGGCTGCCCTCTaGTCAGGGTTTCTTGTTACCACTCGAATCCTGAATGTCCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: RTTSAPCCFSSLAAL*SGFLVTTRILNVPS Trigger: AGATGGGACATTCAGGATTCGAGTGGTAACAAGAAACCCTGAGCAGAGGGCAGCCAAAGAGCTGAAGCAGCAAGGTGCTGAGGTAGTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS GCA 90 bp | GTCTCCTCGCACTACCTCAGCACCTTGCTGCTTCAGCTCTTTGGCTaGCCTCTGCTCAGGGTTTCTTGTTACCACTCGAATCCTGAATGT | + |
|
Preference number: 5 (lower is better) Translates to: VSSHYLSTLLLQLFG*PLLRVSCYHSNPEC Trigger: ACATTCAGGATTCGAGTGGTAACAAGAAACCCTGAGCAGAGGGCAGCCAAAGAGCTGAAGCAGCAAGGTGCTGAGGTAGTGCGAGGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS-3UTR CAA 90 bp | CAGTCAGAATTAACTGAAGGCAGGTTCCCAGAAGCTCCTTGCAGACTCCAAATCCATGTTGGCCAAGTCTaGAGCCCCCTGGAAACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QSELTEGRFPEAPCRLQIHVGQV*SPLETK Trigger: CTTGGTTTCCAGGGGGCTCAAGACTTGGCCAACATG...GATTTGGAGTCTGCAAGGAGCTTCTGGGAACCTGCCTTCAGTTAATTCTGACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| CDS-3UTR CAA 90 bp | TGTTGTGCTTGTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCAAAGTCCCAGATCGGCTAGAAGCTaGCCCTGCTGCACTTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: CCACCPYKCFKITAVQSPRSARS*PCCTSR Trigger: CCGAGAAGTGCAGCAGGGCAAGCTTCTAGCCGATCT...GGGACTTTGCACAGCTGTGATCTTGAAGCATTTGTAGGGACAACAAGCACAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
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| CDS-3UTR CAA 90 bp | GAAAGAGTGTTTGTTGTGCTTGTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCTGCTTCAGCTCTTaGGCTGCCCTCTGCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ERVFVVLVVPTNASRSQLCCFSS*AALCSG Trigger: CCCTGAGCAGAGGGCAGCCAAAGAGCTGAAGCAGCA...CAGCTGTGATCTTGAAGCATTTGTAGGGACAACAAGCACAACAAACACTCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
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| CDS-3UTR CAA 90 bp | TGTTGTGCTTGTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCAAAGTCCCCATGTTGGCCAAGTCTaGAGCCCCCTGGAAACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CCACCPYKCFKITAVQSPHVGQV*SPLETK Trigger: CTTGGTTTCCAGGGGGCTCAAGACTTGGCCAACATG...GGGACTTTGCACAGCTGTGATCTTGAAGCATTTGTAGGGACAACAAGCACAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
||
| CDS-3UTR CAA 90 bp | GGCATCTTTATTTACCAGTCAGAATTAACTGAAGGCAGGTTCCCAGAAGCTCCTAGATCGGCTAGAAGCTaGCCCTGCTGCACTTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: GIFIYQSELTEGRFPEAPRSARS*PCCTSR Trigger: CCGAGAAGTGCAGCAGGGCAAGCTTCTAGCCGATCT...AGGAGCTTCTGGGAACCTGCCTTCAGTTAATTCTGACTGGTAAATAAAGATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
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| CDS-3UTR CAA 90 bp | TACTTCATGACTTTAAACACACCAAGTAAGCCTGCGCCTCCTATTCCAGTTTTGTCCTCCACCTCCCCTTaGCCATCAAAGTGTCCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: YFMTLNTPSKPAPPIPVLSSTSP*PSKCPA Trigger: CGCAGGACACTTTGATGGCAAAGGGGAGGTGGAGGA...CAAAACTGGAATAGGAGGCGCAGGCTTACTTGGTGTGTTTAAAGTCATGAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
||
| CDS CCA 90 bp | GATGAATGTTCCGATCAGGTTTCAGGGTGTAGAAACGGAACATGTTaGCCAAGTCTTGAGCCCCCTGGAAACCAAGTTTCTCGTAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: DECSDQVSGCRNGTC*PSLEPPGNQVSRNP Trigger: AGGATTACGAGAAACTTGGTTTCCAGGGGGCTCAAGACTTGGCCAACATGTTCCGTTTCTACACCCTGAAACCTGATCGGAACATTCATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079130.14 ENSMUST00000120056.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAGTGTTTGTTGTGCTTGTTGTCCCTACAAATGCTTCAAGATCACAGCTGTTCCTCCACCTCCCCTTaGCCATCAAAGTGTCCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: KECLLCLLSLQMLQDHSCSSTSP*PSKCPA Trigger: CGCAGGACACTTTGATGGCAAAGGGGAGGTGGAGGA...ACAGCTGTGATCTTGAAGCATTTGTAGGGACAACAAGCACAACAAACACTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
||
| CDS-3UTR CAA 90 bp | GCTTTAGTCTGTTTATCCCATATTTTAGGGTATGACACAGTAAATCGTTCCTCATCCAGTGTCTGGGCTTaGGGGTTGAGTCGCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ALVCLSHILGYDTVNRSSSSVWA*GLSRRV Trigger: GACCCTGCGACTCAACCCCAAAGCCCAGACACTGGA...TGAGGAACGATTTACTGTGTCATACCCTAAAATATGGGATAAACAGACTAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120056.8 |
||
| CDS-3UTR CAA 90 bp | CTTGTTGTCCCTACAAATGCTTCAAGATCACAGCTGTGCAAAGTCCCCTTTGTGCGTAATCCTCAGGAGTaGTCTGGAAACAGAGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: LVVPTNASRSQLCKVPFVRNPQE*SGNRES Trigger: GGATTCTCTGTTTCCAGACAACTCCTGAGGATTACG...CACAAAGGGGACTTTGCACAGCTGTGATCTTGAAGCATTTGTAGGGACAACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
||
| CDS GCA 72 bp | GCATCGTCCTGGTCTCCTCGCACTACCTCAGCACCTTaGTGCTTCAGCTCTTTGGCTGCCCTCTGCTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ASSWSPRTTSAP*CFSSLAALCSG Trigger: CCCTGAGCAGAGGGCAGCCAAAGAGCTGAAGCAGCAAGGTGCTGAGGTAGTGCGAGGAGACCAGGACGATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
||
| CDS CCA 72 bp | CCAGCCAAGGCCAGCTCCATGCTAGCTGCATCGTCCTaGTCTCCTCGCACTACCTCAGCACCTTGCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PAKASSMLAASS*SPRTTSAPCCF Trigger: GAAGCAGCAAGGTGCTGAGGTAGTGCGAGGAGACCAGGACGATGCAGCTAGCATGGAGCTGGCCTTGGCTGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
||
| CDS CAA 72 bp | TGGAGGCCCAAGCGTTTGGCTAGATCGGCTAGAAGCTaGCCCTGCTGCACTTCTCGGTCCTGGCTGCACGTC | + |
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Preference number: 6 (lower is better) Translates to: WRPKRLARSARS*PCCTSRSWLHV Trigger: GACGTGCAGCCAGGACCGAGAAGTGCAGCAGGGCAAGCTTCTAGCCGATCTAGCCAAACGCTTGGGCCTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074970.8 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS TCA 72 bp | GGTCCTGGCTGCACGTCTCCCAGTAATTGGTCACAATaGAGGTGGCATGGGCTCCAGCCAAGGCCAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: GPGCTSPSNWSQ*RWHGLQPRPAP Trigger: TGGAGCTGGCCTTGGCTGGAGCCCATGCCACCTTCATTGTGACCAATTACTGGGAGACGTGCAGCCAGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS CAA 72 bp | TGCATCGTCCTGGTCTCCTCGCACTACCTCAGCACCTaGCTGCTTCAGCTCTTTGGCTGCCCTCTGCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: CIVLVSSHYLST*LLQLFGCPLLR Trigger: CCTGAGCAGAGGGCAGCCAAAGAGCTGAAGCAGCAAGGTGCTGAGGTAGTGCGAGGAGACCAGGACGATGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS TCA 72 bp | AGGCAGCATACTCCTCTGCGGTGTGCCTGCAGGTACTaGGCCCGATGTTCTGCCCTACGTACTCTTCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: RQHTPLRCACRY*ARCSALRTLLA Trigger: AGCCAGAAGAGTACGTAGGGCAGAACATCGGGCTCAGTACCTGCAGGCACACCGCAGAGGAGTATGCTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS GCA 72 bp | TCGTCCTGGTCTCCTCGCACTACCTCAGCACCTTGCTaGTTCAGCTCTTTGGCTGCCCTCTGCTCAGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: SSWSPRTTSAPC*FSSLAALCSGF Trigger: AAACCCTGAGCAGAGGGCAGCCAAAGAGCTGAAGCAGCAAGGTGCTGAGGTAGTGCGAGGAGACCAGGACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS GCA 72 bp | TGCTTGCTAAGCAAGGCAGCATACTCCTCTGCGGTGTaGCTGCAGGTACTGAGCCCGATGTTCTGCCCTACG | + |
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Preference number: 6 (lower is better) Translates to: CLLSKAAYSSAV*LQVLSPMFCPT Trigger: CGTAGGGCAGAACATCGGGCTCAGTACCTGCAGGCACACCGCAGAGGAGTATGCTGCCTTGCTTAGCAAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS CAA 90 bp | CATGCTAGCTGCATCGTCCTGGTCTCCTCGCACTACCTCAGCACCTaGCTGCTTCAGCTCTTTGGCTGCCCTCTGCTCAGGGTTTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: HASCIVLVSSHYLST*LLQLFGCPLLRVSC Trigger: ACAAGAAACCCTGAGCAGAGGGCAGCCAAAGAGCTGAAGCAGCAAGGTGCTGAGGTAGTGCGAGGAGACCAGGACGATGCAGCTAGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS TCA 72 bp | TCTGCCCTACGTACTCTTCTGGCTTCTTCAGCAAGCTaGGCACCACGGGGCCCAGGTCACTCACAGACATTC | + |
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Preference number: 6 (lower is better) Translates to: SALRTLLASSAS*APRGPGHSQTF Trigger: GAATGTCTGTGAGTGACCTGGGCCCCGTGGTGCTCAGCTTGCTGAAGAAGCCAGAAGAGTACGTAGGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS GCA 72 bp | TCTGCGGTGTGCCTGCAGGTACTGAGCCCGATGTTCTaGCCTACGTACTCTTCTGGCTTCTTCAGCAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SAVCLQVLSPMF*PTYSSGFFSKL Trigger: CAGCTTGCTGAAGAAGCCAGAAGAGTACGTAGGGCAGAACATCGGGCTCAGTACCTGCAGGCACACCGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS CCA 72 bp | AGAAGCTTGCCTTGTTTGAATACTTGGTCCCACTGGTaGGGCTGCTGCACTTCTCGGTCCTGGCTGCACGTC | + |
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Preference number: 6 (lower is better) Translates to: RSLPCLNTWSHW*GCCTSRSWLHV Trigger: GACGTGCAGCCAGGACCGAGAAGTGCAGCAGCCCCACCAGTGGGACCAAGTATTCAAACAAGGCAAGCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079130.14 |
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| CDS CAA 90 bp | TCCTGGTCTCCTCGCACTACCTCAGCACCTTGCTGCTTCAGCTCTTaGGCTGCCCTCTGCTCAGGGTTTCTTGTTACCACTCGAATCCTG | + |
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Preference number: 6 (lower is better) Translates to: SWSPRTTSAPCCFSS*AALCSGFLVTTRIL Trigger: CAGGATTCGAGTGGTAACAAGAAACCCTGAGCAGAGGGCAGCCAAAGAGCTGAAGCAGCAAGGTGCTGAGGTAGTGCGAGGAGACCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS CCA 72 bp | CTCGCACTACCTCAGCACCTTGCTGCTTCAGCTCTTTaGCTGCCCTCTGCTCAGGGTTTCTTGTTACCACTC | + |
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Preference number: 6 (lower is better) Translates to: LALPQHLAASAL*LPSAQGFLLPL Trigger: GAGTGGTAACAAGAAACCCTGAGCAGAGGGCAGCCAAAGAGCTGAAGCAGCAAGGTGCTGAGGTAGTGCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS CCA 72 bp | GCTAGATCGGCTAGAAGCTTGCCTTGTTTGAATACTTaGTCCCACTGGTGGGGCTGCTGCACTTCTCGGTCC | + |
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Preference number: 6 (lower is better) Translates to: ARSARSLPCLNT*SHWWGCCTSRS Trigger: GGACCGAGAAGTGCAGCAGCCCCACCAGTGGGACCAAGTATTCAAACAAGGCAAGCTTCTAGCCGATCTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079130.14 |
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| CDS CAA 72 bp | CCTCGCACTACCTCAGCACCTTGCTGCTTCAGCTCTTaGGCTGCCCTCTGCTCAGGGTTTCTTGTTACCACT | + |
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Preference number: 6 (lower is better) Translates to: PRTTSAPCCFSS*AALCSGFLVTT Trigger: AGTGGTAACAAGAAACCCTGAGCAGAGGGCAGCCAAAGAGCTGAAGCAGCAAGGTGCTGAGGTAGTGCGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS TCA 72 bp | TGCCAGGAAGACTGGCTTCCTCCAGAGTCCTTGGCATaGTGTACAGCCTTGCCAGTGTGCTTGCTAAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: CQEDWLPPESLA*CTALPVCLLSK Trigger: CTTGCTTAGCAAGCACACTGGCAAGGCTGTACATCATGCCAAGGACTCTGGAGGAAGCCAGTCTTCCTGGCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
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| CDS TCA 72 bp | GAGAATCCACCATGTCTGTCTCCTCTACAGCCTTGGTaGTGCCAGGAAGACTGGCTTCCTCCAGAGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: ENPPCLSPLQPW*CQEDWLPPESL Trigger: CAAGGACTCTGGAGGAAGCCAGTCTTCCTGGCATCACCAAGGCTGTAGAGGAGACAGACATGGTGGATTCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
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| CDS TCA 72 bp | CCCTCTGCTCAGGGTTTCTTGTTACCACTCGAATCCTaGATGTCCCATCTTCTAGCAATGCACGGGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: PSAQGFLLPLES*MSHLLAMHGPQ Trigger: CTGTGGCCCGTGCATTGCTAGAAGATGGGACATTCAGGATTCGAGTGGTAACAAGAAACCCTGAGCAGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS GCA 72 bp | CACTACCTCAGCACCTTGCTGCTTCAGCTCTTTGGCTaGCCTCTGCTCAGGGTTTCTTGTTACCACTCGAAT | + |
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Preference number: 6 (lower is better) Translates to: HYLSTLLLQLFG*PLLRVSCYHSN Trigger: ATTCGAGTGGTAACAAGAAACCCTGAGCAGAGGGCAGCCAAAGAGCTGAAGCAGCAAGGTGCTGAGGTAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS CAA 72 bp | AAGCGTTTGGCTAGATCGGCTAGAAGCTTGCCTTGTTaGAATACTTGGTCCCACTGGTGGGGCTGCTGCACT | + |
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Preference number: 6 (lower is better) Translates to: KRLARSARSLPC*NTWSHWWGCCT Trigger: AGTGCAGCAGCCCCACCAGTGGGACCAAGTATTCAAACAAGGCAAGCTTCTAGCCGATCTAGCCAAACGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079130.14 |
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| CDS CAA 90 bp | TTGTCTGGAAACAGAGAATCCACCATGTCTGTCTCCTCTACAGCCTaGGTGATGCCAGGAAGACTGGCTTCCTCCAGAGTCCTTGGCATG | + |
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Preference number: 6 (lower is better) Translates to: LSGNRESTMSVSSTA*VMPGRLASSRVLGM Trigger: CATGCCAAGGACTCTGGAGGAAGCCAGTCTTCCTGGCATCACCAAGGCTGTAGAGGAGACAGACATGGTGGATTCTCTGTTTCCAGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
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| CDS GCA 72 bp | TCAGCACCTTGCTGCTTCAGCTCTTTGGCTGCCCTCTaGTCAGGGTTTCTTGTTACCACTCGAATCCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: SAPCCFSSLAAL*SGFLVTTRILN Trigger: ATTCAGGATTCGAGTGGTAACAAGAAACCCTGAGCAGAGGGCAGCCAAAGAGCTGAAGCAGCAAGGTGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS CAA 90 bp | CCGATCAGGTTTCAGGGTGTAGAAACGGAACATGTTGGCCAAGTCTaGAGCCCCCTGGAAACCAAGTTTCTCGTAATCCTCAGGAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: PIRFQGVETEHVGQV*SPLETKFLVILRSC Trigger: ACAACTCCTGAGGATTACGAGAAACTTGGTTTCCAGGGGGCTCAAGACTTGGCCAACATGTTCCGTTTCTACACCCTGAAACCTGATCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079130.14 ENSMUST00000120056.8 |
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| CDS CAA 90 bp | AGTCTTGAGCCCCCTGGAAACCAAGTTTCTCGTAATCCTCAGGAGTaGTCTGGAAACAGAGAATCCACCATGTCTGTCTCCTCTACAGCC | + |
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Preference number: 6 (lower is better) Translates to: SLEPPGNQVSRNPQE*SGNRESTMSVSSTA Trigger: GGCTGTAGAGGAGACAGACATGGTGGATTCTCTGTTTCCAGACAACTCCTGAGGATTACGAGAAACTTGGTTTCCAGGGGGCTCAAGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
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| CDS CCA 72 bp | AAAGGAGATTCTCGAAATAGCAAGGCAGCCGCACACTaGTCATGGGAACACCGATGTCTCGGAAGTATTCCT | + |
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Preference number: 6 (lower is better) Translates to: KGDSRNSKAAAH*SWEHRCLGSIP Trigger: AGGAATACTTCCGAGACATCGGTGTTCCCATGACCAGTGTGCGGCTGCCTTGCTATTTCGAGAATCTCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074970.8 ENSMUST00000079130.14 ENSMUST00000115851.10 ENSMUST00000120056.8 |
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| CDS CAA 72 bp | CCCCCTGGAAACCAAGTTTCTCGTAATCCTCAGGAGTaGTCTGGAAACAGAGAATCCACCATGTCTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: PPGNQVSRNPQE*SGNRESTMSVS Trigger: GGAGACAGACATGGTGGATTCTCTGTTTCCAGACAACTCCTGAGGATTACGAGAAACTTGGTTTCCAGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115851.10 |
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| CDS CAA 72 bp | TTTCAGGGTGTAGAAACGGAACATGTTGGCCAAGTCTaGAGCCCCCTGGAAACCAAGTTTCTCGTAATCCTC | + |
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Preference number: 6 (lower is better) Translates to: FQGVETEHVGQV*SPLETKFLVIL Trigger: GAGGATTACGAGAAACTTGGTTTCCAGGGGGCTCAAGACTTGGCCAACATGTTCCGTTTCTACACCCTGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079130.14 ENSMUST00000120056.8 |
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