Pregenerated sensors for NMNAT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032456Ensembl transcript IDs: ENSMUST00000112935.8, ENSMUST00000112937.3, ENSMUST00000112938.8, ENSMUST00000134253.8
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAGCTGGCCTCGGAGGGATGGACCAAGATTGCACGGAGTTAACCTaGGGCCCCAGGCTGGATAGTGTCTCCTCAGAAGCAGGAGTGGGC | + |
|
Preference number: 1 (lower is better) Translates to: GAGLGGMDQDCTELT*GPRLDSVSSEAGVG Trigger: GCCCACTCCTGCTTCTGAGGAGACACTATCCAGCCTGGGGCCTCAGGTTAACTCCGTGCAATCTTGGTCCATCCCTCCGAGGCCAGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112938.8 |
||
| 3UTR CCA 90 bp | TGGGTTCCAGCACCCACATCAGGGGGCTCACAACTGCCAGTAACTTaGGTTTCAGGCACTCTGATGTCCCTCCCATGTGCATGTACACAC | + |
|
Preference number: 1 (lower is better) Translates to: WVPAPTSGGSQLPVT*VSGTLMSLPCACTH Trigger: GTGTGTACATGCACATGGGAGGGACATCAGAGTGCCTGAAACCCAAGTTACTGGCAGTTGTGAGCCCCCTGATGTGGGTGCTGGAACCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| 3UTR TCA 90 bp | AGGCAGGCAGGCCATGGTTACAAGGGAGGATACATTGGAAATCAATaGTGTTCTGTTTCCAGATTTCTGAATCCTCACTTGCTATTATTG | + |
|
Preference number: 1 (lower is better) Translates to: RQAGHGYKGGYIGNQ*CSVSRFLNPHLLLL Trigger: CAATAATAGCAAGTGAGGATTCAGAAATCTGGAAACAGAACATCATTGATTTCCAATGTATCCTCCCTTGTAACCATGGCCTGCCTGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| 3UTR CAA 90 bp | TTGGGTTCCAGCACCCACATCAGGGGGCTCACAACTGCCAGTAACTaGGGTTTCAGGCACTCTGATGTCCCTCCCATGTGCATGTACACA | + |
|
Preference number: 2 (lower is better) Translates to: LGSSTHIRGLTTASN*GFRHSDVPPMCMYT Trigger: TGTGTACATGCACATGGGAGGGACATCAGAGTGCCTGAAACCCAAGTTACTGGCAGTTGTGAGCCCCCTGATGTGGGTGCTGGAACCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| 3UTR-3UTR GCA 90 bp | ACTCTCTTGCTGCTCTTCCCTAAGACTGGAGTTTGGGTTCCAGCACCCACATCACTCAGGGGCCAACCATaGTCAGGACAGCATCAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: TLLLLFPKTGVWVPAPTSLRGQP*SGQHQC Trigger: ACACTGATGCTGTCCTGAGCATGGTTGGCCCCTGAG...TGATGTGGGTGCTGGAACCCAAACTCCAGTCTTAGGGAAGAGCAGCAAGAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| 3UTR-3UTR GCA 90 bp | ACTCTCTTGCTGCTCTTCCCTAAGACTGGAGTTTGGGTTCCAGCACCCACATCACTATCAAGACCAGCATaGTGCACCTGGCCCGAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: TLLLLFPKTGVWVPAPTSLSRPA*CTWPEL Trigger: TAACTCGGGCCAGGTGCAGCATGCTGGTCTTGATAG...TGATGTGGGTGCTGGAACCCAAACTCCAGTCTTAGGGAAGAGCAGCAAGAGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| 3UTR-3UTR CCA 90 bp | AGAACTCTCTTGCTGCTCTTCCCTAAGACTGGAGTTTGGGTTCCAGCACCCACAGGCACGATCTCTTCCTaGAGTAGGAAGTCACCCATG | + |
|
Preference number: 2 (lower is better) Translates to: RTLLLLFPKTGVWVPAPTGTISS*SRKSPM Trigger: CATGGGTGACTTCCTACTCCAGGAAGAGATCGTGCC...TGTGGGTGCTGGAACCCAAACTCCAGTCTTAGGGAAGAGCAGCAAGAGAGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| 3UTR-3UTR GCA 90 bp | AGTCAAAAATTTTATGTTACACCACAGGCAGGTGGCAGACAGACAGACAGGCAGCTCAGGGGCCAACCATaGTCAGGACAGCATCAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: SQKFYVTPQAGGRQTDRQLRGQP*SGQHQC Trigger: ACACTGATGCTGTCCTGAGCATGGTTGGCCCCTGAG...CTGCCTGTCTGTCTGTCTGCCACCTGCCTGTGGTGTAACATAAAATTTTTGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| 3UTR-3UTR GCA 90 bp | GGCAGGCAGGCCATGGTTACAAGGGAGGATACATTGGAAATCAATGATGTTCTGTGTGCCTCCCATGACTaGCATTTACACAGTAAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: GRQAMVTREDTLEINDVLCASHD*HLHSKQ Trigger: CTGCTTACTGTGTAAATGGCAGTCATGGGAGGCACA...CAGAACATCATTGATTTCCAATGTATCCTCCCTTGTAACCATGGCCTGCCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| 3UTR-3UTR TCA 90 bp | ACTCTCTTGCTGCTCTTCCCTAAGACTGGAGTTTGGGTTCCAGCACCCACATCACTTGCTATTATTGTTTaGGCCGAGGATGTTGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: TLLLLFPKTGVWVPAPTSLAIIV*AEDVEK Trigger: CTTTTCAACATCCTCGGCTCAAACAATAATAGCAAG...TGATGTGGGTGCTGGAACCCAAACTCCAGTCTTAGGGAAGAGCAGCAAGAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| 3UTR-3UTR TCA 90 bp | ACTCTCTTGCTGCTCTTCCCTAAGACTGGAGTTTGGGTTCCAGCACCCACATCACTGTTTCCAGATTTCTaGATCCTCACTTGCTATTAT | + |
|
Preference number: 2 (lower is better) Translates to: TLLLLFPKTGVWVPAPTSLFPDF*ILTCYY Trigger: ATAATAGCAAGTGAGGATTCAGAAATCTGGAAACAG...TGATGTGGGTGCTGGAACCCAAACTCCAGTCTTAGGGAAGAGCAGCAAGAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| 3UTR-3UTR GCA 90 bp | TCTGTTTCCAGATTTCTGAATCCTCACTTGCTATTATTGTTTGAGCCGAGGATGCTATCAAGACCAGCATaGTGCACCTGGCCCGAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: SVSRFLNPHLLLLFEPRMLSRPA*CTWPEL Trigger: TAACTCGGGCCAGGTGCAGCATGCTGGTCTTGATAG...CATCCTCGGCTCAAACAATAATAGCAAGTGAGGATTCAGAAATCTGGAAACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| 3UTR CAA 90 bp | TTATACAATGGAGGGATGAAAGGGAGACATCTAGTCAGACACACATaGATTTCTAGGATGCACAAGACTGGGCCCTCTGAGGCATTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LYNGGMKGRHLVRHT*ISRMHKTGPSEAFL Trigger: AAGAAATGCCTCAGAGGGCCCAGTCTTGTGCATCCTAGAAATCAATGTGTGTCTGACTAGATGTCTCCCTTTCATCCCTCCATTGTATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112938.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCAGGCAGGCCATGGTTACAAGGGAGGATACATTGGAAATCAATGATGTTCTGTCTTATGACCTGTCATaGCTCTTAAGTTGCTCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: GRQAMVTREDTLEINDVLSYDLS*LLSCSD Trigger: ATCAGAGCAACTTAAGAGGCATGACAGGTCATAAGA...CAGAACATCATTGATTTCCAATGTATCCTCCCTTGTAACCATGGCCTGCCTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| 3UTR-3UTR GCA 90 bp | TCTGTTTCCAGATTTCTGAATCCTCACTTGCTATTATTGTTTGAGCCGAGGATGTCTTATGACCTGTCATaGCTCTTAAGTTGCTCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: SVSRFLNPHLLLLFEPRMSYDLS*LLSCSD Trigger: ATCAGAGCAACTTAAGAGGCATGACAGGTCATAAGA...CATCCTCGGCTCAAACAATAATAGCAAGTGAGGATTCAGAAATCTGGAAACAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| 3UTR-3UTR TCA 90 bp | GGGAGGATACATTGGAAATCAATGATGTTCTGTTTCCAGATTTCTGAATCCTCACTTGCTATTATTGTTTaGGCCGAGGATGTTGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: GRIHWKSMMFCFQISESSLAIIV*AEDVEK Trigger: CTTTTCAACATCCTCGGCTCAAACAATAATAGCAAG...TGAGGATTCAGAAATCTGGAAACAGAACATCATTGATTTCCAATGTATCCTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| 3UTR TCA 72 bp | CTCGGAGGGATGGACCAAGATTGCACGGAGTTAACCTaGGGCCCCAGGCTGGATAGTGTCTCCTCAGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LGGMDQDCTELT*GPRLDSVSSEA Trigger: TGCTTCTGAGGAGACACTATCCAGCCTGGGGCCTCAGGTTAACTCCGTGCAATCTTGGTCCATCCCTCCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112938.8 |
||
| 3UTR CCA 72 bp | GCACCCACATCAGGGGGCTCACAACTGCCAGTAACTTaGGTTTCAGGCACTCTGATGTCCCTCCCATGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: APTSGGSQLPVT*VSGTLMSLPCA Trigger: TGCACATGGGAGGGACATCAGAGTGCCTGAAACCCAAGTTACTGGCAGTTGTGAGCCCCCTGATGTGGGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| 3UTR CCA 72 bp | AGAACTCTCTTGCTGCTCTTCCCTAAGACTGGAGTTTaGGTTCCAGCACCCACATCAGGGGGCTCACAACTG | + |
|
Preference number: 3 (lower is better) Translates to: RTLLLLFPKTGV*VPAPTSGGSQL Trigger: CAGTTGTGAGCCCCCTGATGTGGGTGCTGGAACCCAAACTCCAGTCTTAGGGAAGAGCAGCAAGAGAGTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGGCAGGCCATGGTTACAAGGGAGGATACATTGGAAATCAATGATGTTCTGTTTCTGAATCCTCACTaGCTATTATTGTTTGAGCCG | + |
|
Preference number: 3 (lower is better) Translates to: GRQAMVTREDTLEINDVLFLNPH*LLLFEP Trigger: CGGCTCAAACAATAATAGCAAGTGAGGATTCAGAAA...CAGAACATCATTGATTTCCAATGTATCCTCCCTTGTAACCATGGCCTGCCTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| 3UTR TCA 72 bp | ACATTGGAAATCAATGATGTTCTGTTTCCAGATTTCTaGATCCTCACTTGCTATTATTGTTTGAGCCGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TLEINDVLFPDF*ILTCYYCLSRG Trigger: TCCTCGGCTCAAACAATAATAGCAAGTGAGGATTCAGAAATCTGGAAACAGAACATCATTGATTTCCAATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR CCA 90 bp | TCCAGCACCCACATCAGGGGGCTCACAACTGCCAGTAACTTGGGTTTCAGGCACGGGCCAGCCGGGCCATaGCCACTCGGTGATGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSTHIRGLTTASNLGFRHGPAGP*PLGDGK Trigger: CTTCCCATCACCGAGTGGCCATGGCCCGGCTGGCCC...GTGCCTGAAACCCAAGTTACTGGCAGTTGTGAGCCCCCTGATGTGGGTGCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112935.8 |
||
| CDS-3UTR GCA 90 bp | AGGGGGCTCACAACTGCCAGTAACTTGGGTTTCAGGCACTCTGATGTCCCTCCCTCCATCCACTGCGCCTaGTCACTCTCCCAGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGLTTASNLGFRHSDVPPSIHCA*SLSQGS Trigger: GGACCCCTGGGAGAGTGAGCAGGCGCAGTGGATGGA...GGGAGGGACATCAGAGTGCCTGAAACCCAAGTTACTGGCAGTTGTGAGCCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR TCA 90 bp | TCCAGCACCCACATCAGGGGGCTCACAACTGCCAGTAACTTGGGTTTCAGGCACCTGAGCAGCTCCCTGTaGTGGTGCCTCAGCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSTHIRGLTTASNLGFRHLSSSL*WCLSTF Trigger: GAAGGTGCTGAGGCACCATCACAGGGAGCTGCTCAG...GTGCCTGAAACCCAAGTTACTGGCAGTTGTGAGCCCCCTGATGTGGGTGCTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR GCA 90 bp | GGGCCCTCTGAGGCATTTCTTGGAGTGAATAAAGATCCGCTCGTGCTGACCCACTCCATCCACTGCGCCTaGTCACTCTCCCAGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPSEAFLGVNKDPLVLTHSIHCA*SLSQGS Trigger: GGACCCCTGGGAGAGTGAGCAGGCGCAGTGGATGGA...GTGGGTCAGCACGAGCGGATCTTTATTCACTCCAAGAAATGCCTCAGAGGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112938.8 |
||
| CDS-3UTR CCA 90 bp | AAGACTGGGCCCTCTGAGGCATTTCTTGGAGTGAATAAAGATCCGCTCGTGCTGGGGCCAGCCGGGCCATaGCCACTCGGTGATGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KTGPSEAFLGVNKDPLVLGPAGP*PLGDGK Trigger: CTTCCCATCACCGAGTGGCCATGGCCCGGCTGGCCC...CAGCACGAGCGGATCTTTATTCACTCCAAGAAATGCCTCAGAGGGCCCAGTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112938.8 |
||
| CDS-3UTR GCA 90 bp | ATTAGCGCCCTGTCAAACTCTGCCTATCAAGACCAGCATGCTGCACCTGGCCCGACCGTTTCCATCCACTaGGCCTGCTCACTCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ISALSNSAYQDQHAAPGPTVSIH*ACSLSQ Trigger: CTGGGAGAGTGAGCAGGCGCAGTGGATGGAAACGGT...CGGGCCAGGTGCAGCATGCTGGTCTTGATAGGCAGAGTTTGACAGGGCGCTAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR GCA 90 bp | TCCAGCACCCACATCAGGGGGCTCACAACTGCCAGTAACTTGGGTTTCAGGCACAGGCTGATGGTGTCTTaGTGGGGTCTGGGCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSTHIRGLTTASNLGFRHRLMVS*WGLGHP Trigger: TGGATGGCCCAGACCCCAGCAAGACACCATCAGCCT...GTGCCTGAAACCCAAGTTACTGGCAGTTGTGAGCCCCCTGATGTGGGTGCTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR GCA 90 bp | GAGGCCCCAGGCTGGATAGTGTCTCCTCAGAAGCAGGAGTGGGCAAACATGATTATCCAGTCAGATGTCTaGAGGGCCAGCCGGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: EAPGWIVSPQKQEWANMIIQSDV*RASRAM Trigger: CATGGCCCGGCTGGCCCTGCAGACATCTGACTGGAT...AATCATGTTTGCCCACTCCTGCTTCTGAGGAGACACTATCCAGCCTGGGGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112938.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGCACCCACATCAGGGGGCTCACAACTGCCAGTAACTTGGGTTTCAGGCACTCTGGGCCATCCATCTaGGCTGAGGATCTGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSTHIRGLTTASNLGFRHSGPSI*AEDLSS Trigger: GCTGCTCAGATCCTCAGCCCAGATGGATGGCCCAGA...GTGCCTGAAACCCAAGTTACTGGCAGTTGTGAGCCCCCTGATGTGGGTGCTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR TCA 90 bp | AAGACTGGGCCCTCTGAGGCATTTCTTGGAGTGAATAAAGATCCGCTCGTGCTGGCCATGGCCACTCGGTaGTGGGAAGCCACCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KTGPSEAFLGVNKDPLVLAMATR*WEATRS Trigger: AGACCTGGTGGCTTCCCATCACCGAGTGGCCATGGC...CAGCACGAGCGGATCTTTATTCACTCCAAGAAATGCCTCAGAGGGCCCAGTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112938.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGGCTCACAACTGCCAGTAACTTGGGTTTCAGGCACTCTGATGTCCCTCCCCTGATGGTGTCTTGCTaGGGTCTGGGCCATCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RGLTTASNLGFRHSDVPPLMVSC*GLGHPS Trigger: AGATGGATGGCCCAGACCCCAGCAAGACACCATCAG...GGGAGGGACATCAGAGTGCCTGAAACCCAAGTTACTGGCAGTTGTGAGCCCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| 3UTR CAA 72 bp | AGCACCCACATCAGGGGGCTCACAACTGCCAGTAACTaGGGTTTCAGGCACTCTGATGTCCCTCCCATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: STHIRGLTTASN*GFRHSDVPPMC Trigger: GCACATGGGAGGGACATCAGAGTGCCTGAAACCCAAGTTACTGGCAGTTGTGAGCCCCCTGATGTGGGTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR TCA 90 bp | TTAAGTTGCTCTGATACTCGACTGTCTCTGCCACAGGCACGATCTCTTCCTGGAGCCATGGCCACTCGGTaGTGGGAAGCCACCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSCSDTRLSLPQARSLPGAMATR*WEATRS Trigger: AGACCTGGTGGCTTCCCATCACCGAGTGGCCATGGC...TCCAGGAAGAGATCGTGCCTGTGGCAGAGACAGTCGAGTATCAGAGCAACTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112935.8 |
||
| CDS-3UTR CCA 90 bp | ATTAGCGCCCTGTCAAACTCTGCCTATCAAGACCAGCATGCTGCACCTGGCCCGCAGAGGTTGGGGGTCTaGAAGGTCTTGAGGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: ISALSNSAYQDQHAAPGPQRLGV*KVLRTS Trigger: TGATGTCCTCAAGACCTTCCAGACCCCCAACCTCTG...CGGGCCAGGTGCAGCATGCTGGTCTTGATAGGCAGAGTTTGACAGGGCGCTAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR CCA 90 bp | AGGGGGCTCACAACTGCCAGTAACTTGGGTTTCAGGCACTCTGATGTCCCTCCCTCAGAACGGGTTCCCTaGCCAGGTGAATGTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGLTTASNLGFRHSDVPPSERVP*PGECCA Trigger: AGCACAACATTCACCTGGCCAGGGAACCCGTTCTGA...GGGAGGGACATCAGAGTGCCTGAAACCCAAGTTACTGGCAGTTGTGAGCCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR CCA 90 bp | ATTAGCGCCCTGTCAAACTCTGCCTATCAAGACCAGCATGCTGCACCTGGCCCGTGGTACCTTCCTGTTTaGTGTAGGTGGTCTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ISALSNSAYQDQHAAPGPWYLPV*CRWSLA Trigger: GGCCAGAGACCACCTACACCAAACAGGAAGGTACCA...CGGGCCAGGTGCAGCATGCTGGTCTTGATAGGCAGAGTTTGACAGGGCGCTAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112935.8 |
||
| CDS-3UTR TCA 90 bp | TTAAGTTGCTCTGATACTCGACTGTCTCTGCCACAGGCACGATCTCTTCCTGGAGCCATCCATCTGGGCTaGGGATCTGAGCAGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSCSDTRLSLPQARSLPGAIHLG*GSEQLP Trigger: AGGGAGCTGCTCAGATCCTCAGCCCAGATGGATGGC...TCCAGGAAGAGATCGTGCCTGTGGCAGAGACAGTCGAGTATCAGAGCAACTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR TCA 90 bp | AGAACTCTCTTGCTGCTCTTCCCTAAGACTGGAGTTTGGGTTCCAGCACCCACATCCAGGAACCGTCATTaGTGTAGAGGCCCTGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RTLLLLFPKTGVWVPAPTSRNRH*CRGPGP Trigger: GGGACCAGGGCCTCTACATCAATGACGGTTCCTGGA...TGTGGGTGCTGGAACCCAAACTCCAGTCTTAGGGAAGAGCAGCAAGAGAGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR CCA 90 bp | GAGGCCCCAGGCTGGATAGTGTCTCCTCAGAAGCAGGAGTGGGCAAACATGATTTGGTACCTTCCTGTTTaGTGTAGGTGGTCTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EAPGWIVSPQKQEWANMIWYLPV*CRWSLA Trigger: GGCCAGAGACCACCTACACCAAACAGGAAGGTACCA...AATCATGTTTGCCCACTCCTGCTTCTGAGGAGACACTATCCAGCCTGGGGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112938.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGGCAGGCCATGGTTACAAGGGAGGATACATTGGAAATCAATGATGTTCTGCTGAGCAGCTCCCTGTaGTGGTGCCTCAGCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRQAMVTREDTLEINDVLLSSSL*WCLSTF Trigger: GAAGGTGCTGAGGCACCATCACAGGGAGCTGCTCAG...CAGAACATCATTGATTTCCAATGTATCCTCCCTTGTAACCATGGCCTGCCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR TCA 90 bp | TGGATAGTGTCTCCTCAGAAGCAGGAGTGGGCAAACATGATTTTAGACAGGCTGGGCATCTGCAGAGGCTaGTGGTGTCTTGCTGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WIVSPQKQEWANMILDRLGICRG*WCLAGV Trigger: GACCCCAGCAAGACACCATCAGCCTCTGCAGATGCC...CAGCCTGTCTAAAATCATGTTTGCCCACTCCTGCTTCTGAGGAGACACTATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112938.8 |
||
| CDS-3UTR CCA 90 bp | AGAACTCTCTTGCTGCTCTTCCCTAAGACTGGAGTTTGGGTTCCAGCACCCACACTGATGGTGTCTTGCTaGGGTCTGGGCCATCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RTLLLLFPKTGVWVPAPTLMVSC*GLGHPS Trigger: AGATGGATGGCCCAGACCCCAGCAAGACACCATCAG...TGTGGGTGCTGGAACCCAAACTCCAGTCTTAGGGAAGAGCAGCAAGAGAGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR TCA 90 bp | AGTCAAAAATTTTATGTTACACCACAGGCAGGTGGCAGACAGACAGACAGGCAGGCCATCCATCTGGGCTaGGGATCTGAGCAGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQKFYVTPQAGGRQTDRQAIHLG*GSEQLP Trigger: AGGGAGCTGCTCAGATCCTCAGCCCAGATGGATGGC...CTGCCTGTCTGTCTGTCTGCCACCTGCCTGTGGTGTAACATAAAATTTTTGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCAGGCCATGGTTACAAGGGAGGATACATTGGAAATCAATGATGTTCTGTCTGGGCCATCCATCTaGGCTGAGGATCTGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRQAMVTREDTLEINDVLSGPSI*AEDLSS Trigger: GCTGCTCAGATCCTCAGCCCAGATGGATGGCCCAGA...CAGAACATCATTGATTTCCAATGTATCCTCCCTTGTAACCATGGCCTGCCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR CCA 90 bp | TTAAGTTGCTCTGATACTCGACTGTCTCTGCCACAGGCACGATCTCTTCCTGGATCAGAACGGGTTCCCTaGCCAGGTGAATGTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSCSDTRLSLPQARSLPGSERVP*PGECCA Trigger: AGCACAACATTCACCTGGCCAGGGAACCCGTTCTGA...TCCAGGAAGAGATCGTGCCTGTGGCAGAGACAGTCGAGTATCAGAGCAACTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR CCA 90 bp | TGGATAGTGTCTCCTCAGAAGCAGGAGTGGGCAAACATGATTTTAGACAGGCTGGGTGTAGGTGGTCTCTaGCCACCTCAAACAAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: WIVSPQKQEWANMILDRLGVGGL*PPQTSA Trigger: TGCGCTTGTTTGAGGTGGCCAGAGACCACCTACACC...CAGCCTGTCTAAAATCATGTTTGCCCACTCCTGCTTCTGAGGAGACACTATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112938.8 |
||
| CDS-3UTR TCA 90 bp | AATGGAGGGATGAAAGGGAGACATCTAGTCAGACACACATTGATTTCTAGGATGCTGAGCAGCTCCCTGTaGTGGTGCCTCAGCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NGGMKGRHLVRHTLISRMLSSSL*WCLSTF Trigger: GAAGGTGCTGAGGCACCATCACAGGGAGCTGCTCAG...CATCCTAGAAATCAATGTGTGTCTGACTAGATGTCTCCCTTTCATCCCTCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112938.8 |
||
| CDS-3UTR CCA 90 bp | AGTCAAAAATTTTATGTTACACCACAGGCAGGTGGCAGACAGACAGACAGGCAGGGTGTAGGTGGTCTCTaGCCACCTCAAACAAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SQKFYVTPQAGGRQTDRQGVGGL*PPQTSA Trigger: TGCGCTTGTTTGAGGTGGCCAGAGACCACCTACACC...CTGCCTGTCTGTCTGTCTGCCACCTGCCTGTGGTGTAACATAAAATTTTTGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112935.8 |
||
| CDS-3UTR CCA 90 bp | TGGATAGTGTCTCCTCAGAAGCAGGAGTGGGCAAACATGATTTTAGACAGGCTGCCTGTTTGGTGTAGGTaGTCTCTGGCCACCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: WIVSPQKQEWANMILDRLPVWCR*SLATSN Trigger: GTTTGAGGTGGCCAGAGACCACCTACACCAAACAGG...CAGCCTGTCTAAAATCATGTTTGCCCACTCCTGCTTCTGAGGAGACACTATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112938.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGGATACATTGGAAATCAATGATGTTCTGTTTCCAGATTTCTGAATCCTCATCCATCCACTGCGCCTaGTCACTCTCCCAGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GRIHWKSMMFCFQISESSSIHCA*SLSQGS Trigger: GGACCCCTGGGAGAGTGAGCAGGCGCAGTGGATGGA...TGAGGATTCAGAAATCTGGAAACAGAACATCATTGATTTCCAATGTATCCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR GCA 90 bp | AATGGAGGGATGAAAGGGAGACATCTAGTCAGACACACATTGATTTCTAGGATGAGGCTGATGGTGTCTTaGTGGGGTCTGGGCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: NGGMKGRHLVRHTLISRMRLMVS*WGLGHP Trigger: TGGATGGCCCAGACCCCAGCAAGACACCATCAGCCT...CATCCTAGAAATCAATGTGTGTCTGACTAGATGTCTCCCTTTCATCCCTCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112938.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGCTGGATAGTGTCTCCTCAGAAGCAGGAGTGGGCAAACATGATTTTAGACTCAAACAAGCGCAGGTaGATATTCGTGATGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PGWIVSPQKQEWANMILDSNKRR*IFVMGL Trigger: CAACCCCATCACGAATATGCACCTGCGCTTGTTTGA...GTCTAAAATCATGTTTGCCCACTCCTGCTTCTGAGGAGACACTATCCAGCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112938.8 |
||
| CDS-3UTR CCA 90 bp | AATGGAGGGATGAAAGGGAGACATCTAGTCAGACACACATTGATTTCTAGGATGTCTGGGCCATCCATCTaGGCTGAGGATCTGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NGGMKGRHLVRHTLISRMSGPSI*AEDLSS Trigger: GCTGCTCAGATCCTCAGCCCAGATGGATGGCCCAGA...CATCCTAGAAATCAATGTGTGTCTGACTAGATGTCTCCCTTTCATCCCTCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112938.8 |
||
| CDS-3UTR CCA 90 bp | AGAACTCTCTTGCTGCTCTTCCCTAAGACTGGAGTTTGGGTTCCAGCACCCACATTCTCCACTATTTCCTaGATGTGCGTGTCTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RTLLLLFPKTGVWVPAPTFSTIS*MCVSFQ Trigger: CTGGAAAGACACGCACATCCAGGAAATAGTGGAGAA...TGTGGGTGCTGGAACCCAAACTCCAGTCTTAGGGAAGAGCAGCAAGAGAGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR GCA 90 bp | TCTGTTTCCAGATTTCTGAATCCTCACTTGCTATTATTGTTTGAGCCGAGGATGAGGCTGATGGTGTCTTaGTGGGGTCTGGGCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVSRFLNPHLLLLFEPRMRLMVS*WGLGHP Trigger: TGGATGGCCCAGACCCCAGCAAGACACCATCAGCCT...CATCCTCGGCTCAAACAATAATAGCAAGTGAGGATTCAGAAATCTGGAAACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR GCA 90 bp | GGGAGGATACATTGGAAATCAATGATGTTCTGTTTCCAGATTTCTGAATCCTCAATCCAGTCAGATGTCTaGAGGGCCAGCCGGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: GRIHWKSMMFCFQISESSIQSDV*RASRAM Trigger: CATGGCCCGGCTGGCCCTGCAGACATCTGACTGGAT...TGAGGATTCAGAAATCTGGAAACAGAACATCATTGATTTCCAATGTATCCTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112935.8 |
||
| CDS-3UTR CCA 90 bp | TGGATAGTGTCTCCTCAGAAGCAGGAGTGGGCAAACATGATTTTAGACAGGCTGATGCCCTCAATCACCTaGTACCTTCCTGTTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WIVSPQKQEWANMILDRLMPSIT*YLPVWC Trigger: ACACCAAACAGGAAGGTACCAGGTGATTGAGGGCAT...CAGCCTGTCTAAAATCATGTTTGCCCACTCCTGCTTCTGAGGAGACACTATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112938.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGGATACATTGGAAATCAATGATGTTCTGTTTCCAGATTTCTGAATCCTCATCCAGGAACCGTCATTaGTGTAGAGGCCCTGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GRIHWKSMMFCFQISESSSRNRH*CRGPGP Trigger: GGGACCAGGGCCTCTACATCAATGACGGTTCCTGGA...TGAGGATTCAGAAATCTGGAAACAGAACATCATTGATTTCCAATGTATCCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR GCA 90 bp | GGGAGGATACATTGGAAATCAATGATGTTCTGTTTCCAGATTTCTGAATCCTCAACCGTTTCCATCCACTaGGCCTGCTCACTCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRIHWKSMMFCFQISESSTVSIH*ACSLSQ Trigger: CTGGGAGAGTGAGCAGGCGCAGTGGATGGAAACGGT...TGAGGATTCAGAAATCTGGAAACAGAACATCATTGATTTCCAATGTATCCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR GCA 90 bp | AGTCAAAAATTTTATGTTACACCACAGGCAGGTGGCAGACAGACAGACAGGCAGTCAAACAAGCGCAGGTaGATATTCGTGATGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SQKFYVTPQAGGRQTDRQSNKRR*IFVMGL Trigger: CAACCCCATCACGAATATGCACCTGCGCTTGTTTGA...CTGCCTGTCTGTCTGTCTGCCACCTGCCTGTGGTGTAACATAAAATTTTTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112935.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTTTCCAGATTTCTGAATCCTCACTTGCTATTATTGTTTGAGCCGAGGATGCAGAGGTTGGGGGTCTaGAAGGTCTTGAGGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: SVSRFLNPHLLLLFEPRMQRLGV*KVLRTS Trigger: TGATGTCCTCAAGACCTTCCAGACCCCCAACCTCTG...CATCCTCGGCTCAAACAATAATAGCAAGTGAGGATTCAGAAATCTGGAAACAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR CCA 90 bp | TCTGTTTCCAGATTTCTGAATCCTCACTTGCTATTATTGTTTGAGCCGAGGATGCCTGTTTGGTGTAGGTaGTCTCTGGCCACCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVSRFLNPHLLLLFEPRMPVWCR*SLATSN Trigger: GTTTGAGGTGGCCAGAGACCACCTACACCAAACAGG...CATCCTCGGCTCAAACAATAATAGCAAGTGAGGATTCAGAAATCTGGAAACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112935.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTTTCCAGATTTCTGAATCCTCACTTGCTATTATTGTTTGAGCCGAGGATGATGCCCTCAATCACCTaGTACCTTCCTGTTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SVSRFLNPHLLLLFEPRMMPSIT*YLPVWC Trigger: ACACCAAACAGGAAGGTACCAGGTGATTGAGGGCAT...CATCCTCGGCTCAAACAATAATAGCAAGTGAGGATTCAGAAATCTGGAAACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112935.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGGATACATTGGAAATCAATGATGTTCTGTTTCCAGATTTCTGAATCCTCATTCTCCACTATTTCCTaGATGTGCGTGTCTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRIHWKSMMFCFQISESSFSTIS*MCVSFQ Trigger: CTGGAAAGACACGCACATCCAGGAAATAGTGGAGAA...TGAGGATTCAGAAATCTGGAAACAGAACATCATTGATTTCCAATGTATCCTCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS CCA 90 bp | GGTCCACCCGAATCCAGTCAGATGTCTGCAGGGCCAGCCGGGCCATaGCCACTCGGTGATGGGAAGCCACCAGGTCTTTCTTCCCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: GPPESSQMSAGPAGP*PLGDGKPPGLSSHS Trigger: GCTATGGGAAGAAAGACCTGGTGGCTTCCCATCACCGAGTGGCCATGGCCCGGCTGGCCCTGCAGACATCTGACTGGATTCGGGTGGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112938.8 |
||
| CDS CCA 90 bp | CGGGTTCCCTGGCCAGGTGAATGTTGTGCTGAAACTGCTGGAGGATaGGCGAGTCCGAGATGTACCTTTCCGGGTCATGACCGCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RVPWPGECCAETAGG*ASPRCTFPGHDRSC Trigger: GCAGGAGCGGTCATGACCCGGAAAGGTACATCTCGGACTCGCCCATCCTCCAGCAGTTTCAGCACAACATTCACCTGGCCAGGGAACCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR CAA 90 bp | GGGCCCTCTGAGGCATTTCTTGGAGTGAATAAAGATCCGCTCGTGCTGACCCACGAGGCTGATGGTGTCTaGCTGGGGTCTGGGCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: GPSEAFLGVNKDPLVLTHEADGV*LGSGPS Trigger: GGATGGCCCAGACCCCAGCAAGACACCATCAGCCTC...GTGGGTCAGCACGAGCGGATCTTTATTCACTCCAAGAAATGCCTCAGAGGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112938.8 |
||
| CDS-3UTR CAA 90 bp | ATTAGCGCCCTGTCAAACTCTGCCTATCAAGACCAGCATGCTGCACCTGGCCCGCTTCACGCTCTGCCCTaGTCCCAAGGCTTTCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ISALSNSAYQDQHAAPGPLHALP*SQGFPD Trigger: GTCAGGAAAGCCTTGGGACAAGGGCAGAGCGTGAAG...CGGGCCAGGTGCAGCATGCTGGTCTTGATAGGCAGAGTTTGACAGGGCGCTAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS TCA 90 bp | CCTGGATGTGCGTGTCTTTCCAGAGGTTGGGGGTCTGGAAGGTCTTaGGGACATCAGCTCCGCAGAGGAGTTTCAACTCTGGCAGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGCACLSRGWGSGRS*GHQLRRGVSTLAVL Trigger: CAGCACTGCCAGAGTTGAAACTCCTCTGCGGAGCTGATGTCCTCAAGACCTTCCAGACCCCCAACCTCTGGAAAGACACGCACATCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS TCA 90 bp | AACTGCTGGAGGATGGGCGAGTCCGAGATGTACCTTTCCGGGTCATaGCCGCTCCTGCTCACGCACACCAAGCCGAACTTCTCCACTATT | + |
|
Preference number: 5 (lower is better) Translates to: NCWRMGESEMYLSGS*PLLLTHTKPNFSTI Trigger: AATAGTGGAGAAGTTCGGCTTGGTGTGCGTGAGCAGGAGCGGTCATGACCCGGAAAGGTACATCTCGGACTCGCCCATCCTCCAGCAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS GCA 90 bp | GGATGGGCGAGTCCGAGATGTACCTTTCCGGGTCATGACCGCTCCTaGTCACGCACACCAAGCCGAACTTCTCCACTATTTCCTGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: GWASPRCTFPGHDRS*SRTPSRTSPLFPGC Trigger: ACATCCAGGAAATAGTGGAGAAGTTCGGCTTGGTGTGCGTGAGCAGGAGCGGTCATGACCCGGAAAGGTACATCTCGGACTCGCCCATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS CCA 90 bp | CCGCTCCTGCTCACGCACACCAAGCCGAACTTCTCCACTATTTCCTaGATGTGCGTGTCTTTCCAGAGGTTGGGGGTCTGGAAGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PLLLTHTKPNFSTIS*MCVSFQRLGVWKVL Trigger: CAAGACCTTCCAGACCCCCAACCTCTGGAAAGACACGCACATCCAGGAAATAGTGGAGAAGTTCGGCTTGGTGTGCGTGAGCAGGAGCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR CAA 90 bp | ATTAGCGCCCTGTCAAACTCTGCCTATCAAGACCAGCATGCTGCACCTGGCCCGGTGTCTTTCCAGAGGTaGGGGGTCTGGAAGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ISALSNSAYQDQHAAPGPVSFQR*GVWKVL Trigger: CAAGACCTTCCAGACCCCCAACCTCTGGAAAGACAC...CGGGCCAGGTGCAGCATGCTGGTCTTGATAGGCAGAGTTTGACAGGGCGCTAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR CAA 90 bp | GGCAGGCAGGCCATGGTTACAAGGGAGGATACATTGGAAATCAATGATGTTCTGGAGGCTGATGGTGTCTaGCTGGGGTCTGGGCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: GRQAMVTREDTLEINDVLEADGV*LGSGPS Trigger: GGATGGCCCAGACCCCAGCAAGACACCATCAGCCTC...CAGAACATCATTGATTTCCAATGTATCCTCCCTTGTAACCATGGCCTGCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR CAA 90 bp | ACTCTCTTGCTGCTCTTCCCTAAGACTGGAGTTTGGGTTCCAGCACCCACATCACTTCACGCTCTGCCCTaGTCCCAAGGCTTTCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TLLLLFPKTGVWVPAPTSLHALP*SQGFPD Trigger: GTCAGGAAAGCCTTGGGACAAGGGCAGAGCGTGAAG...TGATGTGGGTGCTGGAACCCAAACTCCAGTCTTAGGGAAGAGCAGCAAGAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR CAA 90 bp | AGGGGGCTCACAACTGCCAGTAACTTGGGTTTCAGGCACTCTGATGTCCCTCCCATATTCGTGATGGGGTaGAAGGAACCACAGGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RGLTTASNLGFRHSDVPPIFVMG*KEPQAR Trigger: TCTGGCCTGTGGTTCCTTCAACCCCATCACGAATAT...GGGAGGGACATCAGAGTGCCTGAAACCCAAGTTACTGGCAGTTGTGAGCCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112935.8 |
||
| CDS CCA 90 bp | TTGACGGGTGAGATGATGCCCTCAATCACCTGGTACCTTCCTGTTTaGTGTAGGTGGTCTCTGGCCACCTCAAACAAGCGCAGGTGCATA | + |
|
Preference number: 5 (lower is better) Translates to: LTGEMMPSITWYLPV*CRWSLATSNKRRCI Trigger: TATGCACCTGCGCTTGTTTGAGGTGGCCAGAGACCACCTACACCAAACAGGAAGGTACCAGGTGATTGAGGGCATCATCTCACCCGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112935.8 ENSMUST00000112938.8 ENSMUST00000134253.8 |
||
| CDS-3UTR CAA 90 bp | AGTCAAAAATTTTATGTTACACCACAGGCAGGTGGCAGACAGACAGACAGGCAGGAGGCTGATGGTGTCTaGCTGGGGTCTGGGCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SQKFYVTPQAGGRQTDRQEADGV*LGSGPS Trigger: GGATGGCCCAGACCCCAGCAAGACACCATCAGCCTC...CTGCCTGTCTGTCTGTCTGCCACCTGCCTGTGGTGTAACATAAAATTTTTGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS-3UTR CAA 90 bp | AGAACTCTCTTGCTGCTCTTCCCTAAGACTGGAGTTTGGGTTCCAGCACCCACAGTGTCTTTCCAGAGGTaGGGGGTCTGGAAGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RTLLLLFPKTGVWVPAPTVSFQR*GVWKVL Trigger: CAAGACCTTCCAGACCCCCAACCTCTGGAAAGACAC...TGTGGGTGCTGGAACCCAAACTCCAGTCTTAGGGAAGAGCAGCAAGAGAGTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS CCA 90 bp | TCCACTATTTCCTGGATGTGCGTGTCTTTCCAGAGGTTGGGGGTCTaGAAGGTCTTGAGGACATCAGCTCCGCAGAGGAGTTTCAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: STISWMCVSFQRLGV*KVLRTSAPQRSFNS Trigger: AGAGTTGAAACTCCTCTGCGGAGCTGATGTCCTCAAGACCTTCCAGACCCCCAACCTCTGGAAAGACACGCACATCCAGGAAATAGTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS CCA 90 bp | GAGATGATGCCCTCAATCACCTGGTACCTTCCTGTTTGGTGTAGGTaGTCTCTGGCCACCTCAAACAAGCGCAGGTGCATATTCGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: EMMPSITWYLPVWCR*SLATSNKRRCIFVM Trigger: CATCACGAATATGCACCTGCGCTTGTTTGAGGTGGCCAGAGACCACCTACACCAAACAGGAAGGTACCAGGTGATTGAGGGCATCATCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112935.8 ENSMUST00000112938.8 ENSMUST00000134253.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGGATGAAAGGGAGACATCTAGTCAGACACACATTGATTTCTAGGATGCACATATTCGTGATGGGGTaGAAGGAACCACAGGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GGMKGRHLVRHTLISRMHIFVMG*KEPQAR Trigger: TCTGGCCTGTGGTTCCTTCAACCCCATCACGAATAT...GTGCATCCTAGAAATCAATGTGTGTCTGACTAGATGTCTCCCTTTCATCCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112938.8 |
||
| CDS GCA 72 bp | TGCCTCAGCACCTTCACCGTTTCCATCCACTGCGCCTaGTCACTCTCCCAGGGGTCCACCCGAATCCAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: CLSTFTVSIHCA*SLSQGSTRIQS Trigger: TGACTGGATTCGGGTGGACCCCTGGGAGAGTGAGCAGGCGCAGTGGATGGAAACGGTGAAGGTGCTGAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 ENSMUST00000112938.8 |
||
| CDS TCA 72 bp | AGGATGGGCGAGTCCGAGATGTACCTTTCCGGGTCATaGCCGCTCCTGCTCACGCACACCAAGCCGAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: RMGESEMYLSGS*PLLLTHTKPNF Trigger: GAAGTTCGGCTTGGTGTGCGTGAGCAGGAGCGGTCATGACCCGGAAAGGTACATCTCGGACTCGCCCATCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS CAA 90 bp | CAGAGGAGTTTCAACTCTGGCAGTGCTGCAGAGGCTGATGGTGTCTaGCTGGGGTCTGGGCCATCCATCTGGGCTGAGGATCTGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QRSFNSGSAAEADGV*LGSGPSIWAEDLSS Trigger: GCTGCTCAGATCCTCAGCCCAGATGGATGGCCCAGACCCCAGCAAGACACCATCAGCCTCTGCAGCACTGCCAGAGTTGAAACTCCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS TCA 72 bp | GCAGAGGAGTTTCAACTCTGGCAGTGCTGCAGAGGCTaGTGGTGTCTTGCTGGGGTCTGGGCCATCCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: AEEFQLWQCCRG*WCLAGVWAIHL Trigger: CAGATGGATGGCCCAGACCCCAGCAAGACACCATCAGCCTCTGCAGCACTGCCAGAGTTGAAACTCCTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS GCA 72 bp | GTGATGACGGCCTCAGGGAGGAGGTACTTCACGCTCTaGCCTTGTCCCAAGGCTTTCCTGACGTATGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VMTASGRRYFTL*PCPKAFLTYVA Trigger: TGCCACATACGTCAGGAAAGCCTTGGGACAAGGGCAGAGCGTGAAGTACCTCCTCCCTGAGGCCGTCATCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS CAA 72 bp | TTCAACTCTGGCAGTGCTGCAGAGGCTGATGGTGTCTaGCTGGGGTCTGGGCCATCCATCTGGGCTGAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: FNSGSAAEADGV*LGSGPSIWAED Trigger: ATCCTCAGCCCAGATGGATGGCCCAGACCCCAGCAAGACACCATCAGCCTCTGCAGCACTGCCAGAGTTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS CAA 72 bp | GACGGCCTCAGGGAGGAGGTACTTCACGCTCTGCCCTaGTCCCAAGGCTTTCCTGACGTATGTGGCACTGAT | + |
|
Preference number: 6 (lower is better) Translates to: DGLREEVLHALP*SQGFPDVCGTD Trigger: ATCAGTGCCACATACGTCAGGAAAGCCTTGGGACAAGGGCAGAGCGTGAAGTACCTCCTCCCTGAGGCCGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS CAA 90 bp | GTAGGTGATGACGGCCTCAGGGAGGAGGTACTTCACGCTCTGCCCTaGTCCCAAGGCTTTCCTGACGTATGTGGCACTGATCTCGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: VGDDGLREEVLHALP*SQGFPDVCGTDLVQ Trigger: CTGAACGAGATCAGTGCCACATACGTCAGGAAAGCCTTGGGACAAGGGCAGAGCGTGAAGTACCTCCTCCCTGAGGCCGTCATCACCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS CCA 72 bp | TCCTGGATGTGCGTGTCTTTCCAGAGGTTGGGGGTCTaGAAGGTCTTGAGGACATCAGCTCCGCAGAGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SWMCVSFQRLGV*KVLRTSAPQRS Trigger: ACTCCTCTGCGGAGCTGATGTCCTCAAGACCTTCCAGACCCCCAACCTCTGGAAAGACACGCACATCCAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS CCA 72 bp | CTCACGCACACCAAGCCGAACTTCTCCACTATTTCCTaGATGTGCGTGTCTTTCCAGAGGTTGGGGGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LTHTKPNFSTIS*MCVSFQRLGVW Trigger: CCAGACCCCCAACCTCTGGAAAGACACGCACATCCAGGAAATAGTGGAGAAGTTCGGCTTGGTGTGCGTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS CCA 72 bp | TGGCCAGGTGAATGTTGTGCTGAAACTGCTGGAGGATaGGCGAGTCCGAGATGTACCTTTCCGGGTCATGAC | + |
|
Preference number: 6 (lower is better) Translates to: WPGECCAETAGG*ASPRCTFPGHD Trigger: GTCATGACCCGGAAAGGTACATCTCGGACTCGCCCATCCTCCAGCAGTTTCAGCACAACATTCACCTGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS CAA 90 bp | CCGAACTTCTCCACTATTTCCTGGATGTGCGTGTCTTTCCAGAGGTaGGGGGTCTGGAAGGTCTTGAGGACATCAGCTCCGCAGAGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: PNFSTISWMCVSFQR*GVWKVLRTSAPQRS Trigger: ACTCCTCTGCGGAGCTGATGTCCTCAAGACCTTCCAGACCCCCAACCTCTGGAAAGACACGCACATCCAGGAAATAGTGGAGAAGTTCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS GCA 72 bp | AGTCCGAGATGTACCTTTCCGGGTCATGACCGCTCCTaGTCACGCACACCAAGCCGAACTTCTCCACTATTT | + |
|
Preference number: 6 (lower is better) Translates to: SPRCTFPGHDRS*SRTPSRTSPLF Trigger: AAATAGTGGAGAAGTTCGGCTTGGTGTGCGTGAGCAGGAGCGGTCATGACCCGGAAAGGTACATCTCGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112937.3 |
||
| CDS CCA 72 bp | CCCTCAATCACCTGGTACCTTCCTGTTTGGTGTAGGTaGTCTCTGGCCACCTCAAACAAGCGCAGGTGCATA | + |
|
Preference number: 6 (lower is better) Translates to: PSITWYLPVWCR*SLATSNKRRCI Trigger: TATGCACCTGCGCTTGTTTGAGGTGGCCAGAGACCACCTACACCAAACAGGAAGGTACCAGGTGATTGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112935.8 ENSMUST00000112938.8 ENSMUST00000134253.8 |
||
| CDS CCA 72 bp | GAGATGATGCCCTCAATCACCTGGTACCTTCCTGTTTaGTGTAGGTGGTCTCTGGCCACCTCAAACAAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: EMMPSITWYLPV*CRWSLATSNKR Trigger: GCGCTTGTTTGAGGTGGCCAGAGACCACCTACACCAAACAGGAAGGTACCAGGTGATTGAGGGCATCATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112935.8 ENSMUST00000112938.8 ENSMUST00000134253.8 |
||
| CDS TCA 72 bp | CACCAGGTCTTTCTTCCCATAGCTGTCATTGACGGGTaGGATGATGCCCTCAATCACCTGGTACCTTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: HQVFLPIAVIDG*DDALNHLVPSC Trigger: ACAGGAAGGTACCAGGTGATTGAGGGCATCATCTCACCCGTCAATGACAGCTATGGGAAGAAAGACCTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112935.8 ENSMUST00000112938.8 |
||