Pregenerated sensors for NMNAT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028992Ensembl transcript IDs: ENSMUST00000030845.13, ENSMUST00000105693.2, ENSMUST00000119921.8
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTCCAGACGAGCCTCTGGCGGACGCCGTGCCCTGTGTCACAGAGTaGAATGGTTGTGCTTGGCCTCTGCGGCGTTCCTCTGCAGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: SPDEPLADAVPCVTE*NGCAWPLRRSSAEE Trigger: CTCCTCTGCAGAGGAACGCCGCAGAGGCCAAGCACAACCATTCCACTCTGTGACACAGGGCACGGCGTCCGCCAGAGGCTCGTCTGGAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR TCA 90 bp | TCTTGCCTAGGGTCATCTTTGACTCCTGGGTTCAAAGTGATTCTCTaGCCTCAGCTCCTAGTGCAGCTGGGGCTGCAGGTGGGCATCGGT | + |
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Preference number: 1 (lower is better) Translates to: SCLGSSLTPGFKVIL*PQLLVQLGLQVGIG Trigger: ACCGATGCCCACCTGCAGCCCCAGCTGCACTAGGAGCTGAGGTCAGAGAATCACTTTGAACCCAGGAGTCAAAGATGACCCTAGGCAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR GCA 90 bp | GTGTGGCAAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTTTaGCTGAAGCATATATGGCCCAGACTCCACAGAGGACAGAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: VWQMCVCVCVCVCVF*LKHIWPRLHRGQRG Trigger: CCCTCTCTGTCCTCTGTGGAGTCTGGGCCATATATGCTTCAGGCAAAAGACACACACACACACACACACACACACACACATTTGCCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR CCA 90 bp | GCATCGGTGAGCCTGGCTAGAGTGAGGCTGCTCTTTCTCTTTGTGTaGCAAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTTTGC | + |
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Preference number: 1 (lower is better) Translates to: ASVSLARVRLLFLFV*QMCVCVCVCVCVFC Trigger: GCAAAAGACACACACACACACACACACACACACACACATTTGCCACACAAAGAGAAAGAGCAGCCTCACTCTAGCCAGGCTCACCGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR TCA 90 bp | ATCCCAGCAACCACATGGTGGCTCACAACCATCCCCAACAAGATCTaGCTCCCTCTTCTAGAGTGTCTGAAGACAGCTACAGTGTACTTA | + |
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Preference number: 1 (lower is better) Translates to: IPATTWWLTTIPNKI*LPLLECLKTATVYL Trigger: TAAGTACACTGTAGCTGTCTTCAGACACTCTAGAAGAGGGAGTCAGATCTTGTTGGGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR TCA 90 bp | TTGATGACCTCAGACTTGCGGATTGTCAAGGATACCTTGAGCCTTTaGTCCTTCTGCTTCCACCTTCCAAGGGCCAGCATTAAAGGTGTG | + |
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Preference number: 1 (lower is better) Translates to: LMTSDLRIVKDTLSL*SFCFHLPRASIKGV Trigger: CACACCTTTAATGCTGGCCCTTGGAAGGTGGAAGCAGAAGGATCAAAGGCTCAAGGTATCCTTGACAATCCGCAAGTCTGAGGTCATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTTGGCCTCTGCGGCGTTCCTCTGCAGAGGAGCCAGGGTGACCCCAGCATTCTGGCCACGATTTGCGTaGTGTCCTCCATCTTCCACA | + |
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Preference number: 2 (lower is better) Translates to: CLASAAFLCRGARVTPAFWPRFA*CPPSST Trigger: TGTGGAAGATGGAGGACATCACGCAAATCGTGGCCA...GAATGCTGGGGTCACCCTGGCTCCTCTGCAGAGGAACGCCGCAGAGGCCAAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGCTTCCACCTTCCAAGGGCCAGCATTAAAGGTGTGCATTGCCATGCCCAGGGCAGGTGCTGGGAGCTaGGTCTGGGTGCTCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: SASTFQGPALKVCIAMPRAGAGS*VWVLWK Trigger: CTTCCAGAGCACCCAGACTCAGCTCCCAGCACCTGC...CCTGGGCATGGCAATGCACACCTTTAATGCTGGCCCTTGGAAGGTGGAAGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR-3UTR TCA 90 bp | GCCAGTGCTCTACCAACTGAGTCACATGCCCAGCCAAGGTCACATCTTAAAGAATGCTCTGGCCCCTCCTaGGCGCCCTCCGGATCTTGG | + |
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Preference number: 2 (lower is better) Translates to: ASALPTESHAQPRSHLKECSGPS*APSGSW Trigger: CCAAGATCCGGAGGGCGCTCAGGAGGGGCCAGAGCA...TTCTTTAAGATGTGACCTTGGCTGGGCATGTGACTCAGTTGGTAGAGCACTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR-3UTR GCA 90 bp | GGAAGGGCAGTCTGTGCTCTTAACCTCAGAGCCATCTCTCCAGCCCCTAAAGAGGTTGTGCTTGGCCTCTaGGGCGTTCCTCTGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: GRAVCALNLRAISPAPKEVVLGL*GVPLQR Trigger: CCTCTGCAGAGGAACGCCGCAGAGGCCAAGCACAAC...CTCTTTAGGGGCTGGAGAGATGGCTCTGAGGTTAAGAGCACAGACTGCCCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGACAGCAATTTCACCTTaGGCACACCTCGAAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: GKMAQWVRAPDCSSEGPETAISP*AHLEGR Trigger: TCTCCCTTCGAGGTGTGCCCAAGGTGAAATTGCTGT...CTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR CAA 90 bp | ACTGCCAGCCCGAGTGATACAGATGAGCCCAAAGTTGGCCACGATTaGCGTGATGTCCTCCATCTTCCACAAGTTGGGCACGCTGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: TASPSDTDEPKVGHD*RDVLHLPQVGHAEG Trigger: TCCTTCAGCGTGCCCAACTTGTGGAAGATGGAGGACATCACGCAAATCGTGGCCAACTTTGGGCTCATCTGTATCACTCGGGCTGGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR-3UTR CCA 90 bp | TCACTGCCAGCCCGAGTGATACAGATGAGCCCAAAGTTGGCCACGATTTGCGTGAACAACAAACACCAGTaGGGTGTCTTCCGTGGAATC | + |
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Preference number: 2 (lower is better) Translates to: SLPARVIQMSPKLATICVNNKHQ*GVFRGI Trigger: GATTCCACGGAAGACACCCCACTGGTGTTTGTTGTT...CACGCAAATCGTGGCCAACTTTGGGCTCATCTGTATCACTCGGGCTGGCAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTTTAATTTAGACACAGGGTCCTCAGCGTCCCTTGATGACCTCAGACTTGCGCCCTGTGTCACAGAGTaGAATGGTTGTGCTTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: LFNLDTGSSASLDDLRLAPCVTE*NGCAWP Trigger: AGGCCAAGCACAACCATTCCACTCTGTGACACAGGG...CGCAAGTCTGAGGTCATCAAGGGACGCTGAGGACCCTGTGTCTAAATTAAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR-3UTR TCA 90 bp | TACCAACTGAGTCACATGCCCAGCCAAGGTCACATCTTAAAGAATTCCTTCCTTACAAGTTGGGCACGCTaGAGGACTCCAGTAAATCTG | + |
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Preference number: 2 (lower is better) Translates to: YQLSHMPSQGHILKNSFLTSWAR*RTPVNL Trigger: CAGATTTACTGGAGTCCTTCAGCGTGCCCAACTTGT...AAGGAAGGAATTCTTTAAGATGTGACCTTGGCTGGGCATGTGACTCAGTTGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR-3UTR TCA 90 bp | TACCAACTGAGTCACATGCCCAGCCAAGGTCACATCTTAAAGAATTCCTTCCTTACGAGATGTCATTGGTaGTCCACTCGTTCACCAGGT | + |
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Preference number: 2 (lower is better) Translates to: YQLSHMPSQGHILKNSFLTRCHW*STRSPG Trigger: ACCTGGTGAACGAGTGGATCACCAATGACATCTCGT...AAGGAAGGAATTCTTTAAGATGTGACCTTGGCTGGGCATGTGACTCAGTTGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTTTAATTTAGACACAGGGTCCTCAGCGTCCCTTGATGACCTCAGACTTGCGTGTGTGTGTGTCTTTTaGCTGAAGCATATATGGCCC | + |
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Preference number: 2 (lower is better) Translates to: LFNLDTGSSASLDDLRLACVCVF*LKHIWP Trigger: GGGCCATATATGCTTCAGGCAAAAGACACACACACA...CGCAAGTCTGAGGTCATCAAGGGACGCTGAGGACCCTGTGTCTAAATTAAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTTCTGCTTCCACCTTCCAAGGGCCAGCATTAAAGGTGTGCATTGCCATGCCTCTGTTTTGTTTTCTTaGCTAGGGTCATCTTTGACT | + |
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Preference number: 2 (lower is better) Translates to: SFCFHLPRASIKGVHCHASVLFS*LGSSLT Trigger: AGTCAAAGATGACCCTAGGCAAGAAAACAAAACAGA...GGCATGGCAATGCACACCTTTAATGCTGGCCCTTGGAAGGTGGAAGCAGAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR GCA 72 bp | GGACGCCGTGCCCTGTGTCACAGAGTGGAATGGTTGTaGTTGGCCTCTGCGGCGTTCCTCTGCAGAGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: GRRALCHRVEWL*LASAAFLCRGA Trigger: GGCTCCTCTGCAGAGGAACGCCGCAGAGGCCAAGCACAACCATTCCACTCTGTGACACAGGGCACGGCGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR CCA 72 bp | GCCGTGCCCTGTGTCACAGAGTGGAATGGTTGTGCTTaGCCTCTGCGGCGTTCCTCTGCAGAGGAGCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: AVPCVTEWNGCA*PLRRSSAEEPG Trigger: CCCTGGCTCCTCTGCAGAGGAACGCCGCAGAGGCCAAGCACAACCATTCCACTCTGTGACACAGGGCACGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR CCA 72 bp | GAGCCTCTGGCGGACGCCGTGCCCTGTGTCACAGAGTaGAATGGTTGTGCTTGGCCTCTGCGGCGTTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: EPLADAVPCVTE*NGCAWPLRRSS Trigger: AGAGGAACGCCGCAGAGGCCAAGCACAACCATTCCACTCTGTGACACAGGGCACGGCGTCCGCCAGAGGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR CCA 72 bp | TCTGGCGGACGCCGTGCCCTGTGTCACAGAGTGGAATaGTTGTGCTTGGCCTCTGCGGCGTTCCTCTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: SGGRRALCHRVE*LCLASAAFLCR Trigger: TCTGCAGAGGAACGCCGCAGAGGCCAAGCACAACCATTCCACTCTGTGACACAGGGCACGGCGTCCGCCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR-3UTR CAA 90 bp | AGGTGGGCATCGGTGAGCCTGGCTAGAGTGAGGCTGCTCTTTCTCTTTGTGTGGCACAGAGTGGAATGGTaGTGCTTGGCCTCTGCGGCG | + |
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Preference number: 3 (lower is better) Translates to: RWASVSLARVRLLFLFVWHRVEW*CLASAA Trigger: CGCCGCAGAGGCCAAGCACAACCATTCCACTCTGTG...CCACACAAAGAGAAAGAGCAGCCTCACTCTAGCCAGGCTCACCGATGCCCACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR-3UTR CAA 90 bp | AGGTGGGCATCGGTGAGCCTGGCTAGAGTGAGGCTGCTCTTTCTCTTTGTGTGGTCCATCTTCCACAAGTaGGGCACGCTGAAGGACTCC | + |
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Preference number: 3 (lower is better) Translates to: RWASVSLARVRLLFLFVWSIFHK*GTLKDS Trigger: GGAGTCCTTCAGCGTGCCCAACTTGTGGAAGATGGA...CCACACAAAGAGAAAGAGCAGCCTCACTCTAGCCAGGCTCACCGATGCCCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGCTTCCACCTTCCAAGGGCCAGCATTAAAGGTGTGCATTGCCATGCCCAGGAGCGCCCTCCGGATCTaGGTGGACGAGATGTCATTG | + |
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Preference number: 3 (lower is better) Translates to: SASTFQGPALKVCIAMPRSALRI*VDEMSL Trigger: CAATGACATCTCGTCCACCAAGATCCGGAGGGCGCT...CCTGGGCATGGCAATGCACACCTTTAATGCTGGCCCTTGGAAGGTGGAAGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGCTTCCACCTTCCAAGGGCCAGCATTAAAGGTGTGCATTGCCATGCCCAGGCCCCTAAAGAGTAGCTaGTGGGGGCTGGCAAGATGG | + |
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Preference number: 3 (lower is better) Translates to: SASTFQGPALKVCIAMPRPLKSS*WGLARW Trigger: CCATCTTGCCAGCCCCCACAAGCTACTCTTTAGGGG...CCTGGGCATGGCAATGCACACCTTTAATGCTGGCCCTTGGAAGGTGGAAGCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR TCA 72 bp | GGGTCATCTTTGACTCCTGGGTTCAAAGTGATTCTCTaGCCTCAGCTCCTAGTGCAGCTGGGGCTGCAGGTG | + |
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Preference number: 3 (lower is better) Translates to: GSSLTPGFKVIL*PQLLVQLGLQV Trigger: CACCTGCAGCCCCAGCTGCACTAGGAGCTGAGGTCAGAGAATCACTTTGAACCCAGGAGTCAAAGATGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR GCA 72 bp | GCTGGCAAGATGGCTCAGTGGGTAAGAGCACCCGACTaGTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: AGKMAQWVRAPD*SSEGPEFKSQQ Trigger: TTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTTGCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR-3UTR CAA 90 bp | TGCTTGGCCTCTGCGGCGTTCCTCTGCAGAGGAGCCAGGGTGACCCCAGCATTCACCTTTATCTTTCAGTaGATGAAACAGGATGATGGC | + |
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Preference number: 3 (lower is better) Translates to: CLASAAFLCRGARVTPAFTFIFQ*MKQDDG Trigger: GCCATCATCCTGTTTCATCAACTGAAAGATAAAGGT...GAATGCTGGGGTCACCCTGGCTCCTCTGCAGAGGAACGCCGCAGAGGCCAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGCTTCCACCTTCCAAGGGCCAGCATTAAAGGTGTGCATTGCCATGCCCAGGCCTTCGCTCTCCGTGTaGTACAGCTCATGCTTCTCA | + |
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Preference number: 3 (lower is better) Translates to: SASTFQGPALKVCIAMPRPSLSV*YSSCFS Trigger: TGAGAAGCATGAGCTGTACAACACGGAGAGCGAAGG...CCTGGGCATGGCAATGCACACCTTTAATGCTGGCCCTTGGAAGGTGGAAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR GCA 72 bp | GGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTaGTCTTCTAGAGGTCCTGGGTTCAATTCCCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: GWRDGSVVKSTD*SSRGPGFNSQQ Trigger: TTGCTGGGAATTGAACCCAGGACCTCTAGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR GCA 72 bp | TCTGCTTCCACCTTCCAAGGGCCAGCATTAAAGGTGTaGATTGCCATGCCCAGGTGTGGTGATCTAATCCAG | + |
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Preference number: 3 (lower is better) Translates to: SASTFQGPALKV*IAMPRCGDLIQ Trigger: CTGGATTAGATCACCACACCTGGGCATGGCAATGCACACCTTTAATGCTGGCCCTTGGAAGGTGGAAGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR CCA 72 bp | TGTGTGTGTGTGTGTGTCTTTTGCCTGAAGCATATATaGCCCAGACTCCACAGAGGACAGAGAGGGCATCAG | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVFCLKHI*PRLHRGQRGHQ Trigger: CTGATGCCCTCTCTGTCCTCTGTGGAGTCTGGGCCATATATGCTTCAGGCAAAAGACACACACACACACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR TCA 72 bp | ACCACATGGTGGCTCACAACCATCCCCAACAAGATCTaGCTCCCTCTTCTAGAGTGTCTGAAGACAGCTACA | + |
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Preference number: 3 (lower is better) Translates to: TTWWLTTIPNKI*LPLLECLKTAT Trigger: TGTAGCTGTCTTCAGACACTCTAGAAGAGGGAGTCAGATCTTGTTGGGGATGGTTGTGAGCCACCATGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR CCA 72 bp | AGCCTGGCTAGAGTGAGGCTGCTCTTTCTCTTTGTGTaGCAAATGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: SLARVRLLFLFV*QMCVCVCVCVC Trigger: ACACACACACACACACACACACACACACATTTGCCACACAAAGAGAAAGAGCAGCCTCACTCTAGCCAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR-3UTR CAA 90 bp | TACCAACTGAGTCACATGCCCAGCCAAGGTCACATCTTAAAGAATTCCTTCCTTCAGATGAGCCCAAAGTaGGCCACGATTTGCGTGATG | + |
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Preference number: 3 (lower is better) Translates to: YQLSHMPSQGHILKNSFLQMSPK*ATICVM Trigger: CATCACGCAAATCGTGGCCAACTTTGGGCTCATCTG...AAGGAAGGAATTCTTTAAGATGTGACCTTGGCTGGGCATGTGACTCAGTTGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR CCA 72 bp | TGTTTTGTTTTCTTGCCTAGGGTCATCTTTGACTCCTaGGTTCAAAGTGATTCTCTGACCTCAGCTCCTAGT | + |
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Preference number: 3 (lower is better) Translates to: CFVFLPRVIFDS*VQSDSLTSAPS Trigger: ACTAGGAGCTGAGGTCAGAGAATCACTTTGAACCCAGGAGTCAAAGATGACCCTAGGCAAGAAAACAAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR CAA 72 bp | CGCCGTGCCCTGTGTCACAGAGTGGAATGGTTGTGCTaGGCCTCTGCGGCGTTCCTCTGCAGAGGAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: RRALCHRVEWLC*ASAAFLCRGAR Trigger: CCTGGCTCCTCTGCAGAGGAACGCCGCAGAGGCCAAGCACAACCATTCCACTCTGTGACACAGGGCACGGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| CDS-3UTR GCA 90 bp | TGCTTGGCCTCTGCGGCGTTCCTCTGCAGAGGAGCCAGGGTGACCCCAGCATTCCTTGGTGGCAAGTTCTaGCATGATGATTCGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: CLASAAFLCRGARVTPAFLGGKF*HDDSVV Trigger: CACCACCGAATCATCATGGCAGAACTTGCCACCAAG...GAATGCTGGGGTCACCCTGGCTCCTCTGCAGAGGAACGCCGCAGAGGCCAAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| CDS-3UTR TCA 90 bp | CGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTGAGTGCTCTGGCCCCTCCTaGGCGCCCTCCGGATCTTGG | + |
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Preference number: 4 (lower is better) Translates to: RTFIFQLMKQDDGKSFPECSGPS*APSGSW Trigger: CCAAGATCCGGAGGGCGCTCAGGAGGGGCCAGAGCA...CTCAGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
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| CDS-3UTR TCA 90 bp | TCACTGCCAGCCCGAGTGATACAGATGAGCCCAAAGTTGGCCACGATTTGCGTGTCTCCTGATGGTATCTaGGCACCTTCACAGTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SLPARVIQMSPKLATICVSPDGI*APSQSP Trigger: TGGAGACTGTGAAGGTGCTCAGATACCATCAGGAGA...CACGCAAATCGTGGCCAACTTTGGGCTCATCTGTATCACTCGGGCTGGCAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| CDS-3UTR CCA 90 bp | TCCTTCTGCTTCCACCTTCCAAGGGCCAGCATTAAAGGTGTGCATTGCCATGCCACAGACCTGTTGGTTTaGGCTCTTGGGGCTTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: SFCFHLPRASIKGVHCHATDLLV*ALGASV Trigger: CACAGAAGCCCCAAGAGCCCAAACCAACAGGTCTGT...GGCATGGCAATGCACACCTTTAATGCTGGCCCTTGGAAGGTGGAAGCAGAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| 3UTR CAA 72 bp | CCGAGTGATACAGATGAGCCCAAAGTTGGCCACGATTaGCGTGATGTCCTCCATCTTCCACAAGTTGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: PSDTDEPKVGHD*RDVLHLPQVGH Trigger: GTGCCCAACTTGTGGAAGATGGAGGACATCACGCAAATCGTGGCCAACTTTGGGCTCATCTGTATCACTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| CDS-3UTR TCA 90 bp | TTGTTTAATTTAGACACAGGGTCCTCAGCGTCCCTTGATGACCTCAGACTTGCGGGTGGTGGGCTGGGATaGGCCCTTTCTTCTTGTACG | + |
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Preference number: 4 (lower is better) Translates to: LFNLDTGSSASLDDLRLAGGGLG*ALSSCT Trigger: CGTACAAGAAGAAAGGGCTCATCCCAGCCCACCACC...CGCAAGTCTGAGGTCATCAAGGGACGCTGAGGACCCTGTGTCTAAATTAAACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| CDS-3UTR TCA 90 bp | CGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTGAGGCAGAGGAGCCAGGGTaGCCCCAGCATTCCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: RTFIFQLMKQDDGKSFPEAEEPG*PQHSCL Trigger: AAGGCAGGAATGCTGGGGTCACCCTGGCTCCTCTGC...CTCAGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
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| CDS-3UTR TCA 90 bp | GCCAGTGCTCTACCAACTGAGTCACATGCCCAGCCAAGGTCACATCTTAAAGAACACTTCCACCCAGTGTaGGTTCTTGGTGGCAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: ASALPTESHAQPRSHLKEHFHPV*VLGGKF Trigger: GAACTTGCCACCAAGAACTCACACTGGGTGGAAGTG...TTCTTTAAGATGTGACCTTGGCTGGGCATGTGACTCAGTTGGTAGAGCACTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
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| CDS-3UTR TCA 90 bp | TTAAATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCTGCTCTGGCCCCTCCTaGGCGCCCTCCGGATCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LNRTFIFQLMKQDDGKSFCSGPS*APSGSW Trigger: CCAAGATCCGGAGGGCGCTCAGGAGGGGCCAGAGCA...GAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
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| CDS-3UTR GCA 90 bp | CGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTGAGAGCTTTGTGGGTAACTaGAGCTGCCAGTTGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RTFIFQLMKQDDGKSFPESFVGN*SCQLPA Trigger: AGCTGGCAACTGGCAGCTGCAGTTACCCACAAAGCT...CTCAGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 ENSMUST00000119921.8 |
||
| CDS-3UTR TCA 90 bp | CGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTGAGTCTCCTGATGGTATCTaGGCACCTTCACAGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RTFIFQLMKQDDGKSFPESPDGI*APSQSP Trigger: TGGAGACTGTGAAGGTGCTCAGATACCATCAGGAGA...CTCAGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 ENSMUST00000119921.8 |
||
| CDS-3UTR TCA 90 bp | TTTTTAAATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCGCAGAGGAGCCAGGGTaGCCCCAGCATTCCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLNRTFIFQLMKQDDGKSAEEPG*PQHSCL Trigger: AAGGCAGGAATGCTGGGGTCACCCTGGCTCCTCTGC...GGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATTTAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
||
| CDS-3UTR TCA 90 bp | TTAAATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCGGTGGTGGGCTGGGATaGGCCCTTTCTTCTTGTACG | + |
|
Preference number: 4 (lower is better) Translates to: LNRTFIFQLMKQDDGKSFGGGLG*ALSSCT Trigger: CGTACAAGAAGAAAGGGCTCATCCCAGCCCACCACC...GAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 ENSMUST00000119921.8 |
||
| CDS-3UTR TCA 90 bp | AATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTCACTTCCACCCAGTGTaGGTTCTTGGTGGCAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NRTFIFQLMKQDDGKSFPHFHPV*VLGGKF Trigger: GAACTTGCCACCAAGAACTCACACTGGGTGGAAGTG...AGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 ENSMUST00000119921.8 |
||
| CDS-3UTR TCA 90 bp | AATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTTGGCCACGATTTGCGTaGTGTCCTCCATCTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: NRTFIFQLMKQDDGKSFPWPRFA*CPPSST Trigger: TGTGGAAGATGGAGGACATCACGCAAATCGTGGCCA...AGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
||
| CDS-3UTR GCA 90 bp | AATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTACTGCAGCTGCCAGTTaGCAGCTTCTCCTGATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NRTFIFQLMKQDDGKSFPTAAAS*QLLLMV Trigger: TACCATCAGGAGAAGCTGGCAACTGGCAGCTGCAGT...AGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 ENSMUST00000119921.8 |
||
| CDS-3UTR GCA 90 bp | AATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTAGCTTTGTGGGTAACTaGAGCTGCCAGTTGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NRTFIFQLMKQDDGKSFPSFVGN*SCQLPA Trigger: AGCTGGCAACTGGCAGCTGCAGTTACCCACAAAGCT...AGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 ENSMUST00000119921.8 |
||
| CDS-3UTR GCA 90 bp | TTTTTAAATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCGTTGTGCTTGGCCTCTaGGGCGTTCCTCTGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLNRTFIFQLMKQDDGKSVVLGL*GVPLQR Trigger: CCTCTGCAGAGGAACGCCGCAGAGGCCAAGCACAAC...GGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATTTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
||
| CDS-3UTR CCA 90 bp | CGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTGAGCTCTTGGGGCTTCTGTaGGCTAGAATCTTGCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RTFIFQLMKQDDGKSFPELLGLL*ARILLL Trigger: CAAAAGCAAGATTCTAGCCCACAGAAGCCCCAAGAG...CTCAGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 ENSMUST00000119921.8 |
||
| CDS-3UTR CCA 90 bp | TACCAACTGAGTCACATGCCCAGCCAAGGTCACATCTTAAAGAATTCCTTCCTTCTCTTGGGGCTTCTGTaGGCTAGAATCTTGCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YQLSHMPSQGHILKNSFLLLGLL*ARILLL Trigger: CAAAAGCAAGATTCTAGCCCACAGAAGCCCCAAGAG...AAGGAAGGAATTCTTTAAGATGTGACCTTGGCTGGGCATGTGACTCAGTTGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
||
| CDS-3UTR CCA 90 bp | CGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTGAGACAGCAATTTCACCTTaGGCACACCTGTTGGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RTFIFQLMKQDDGKSFPETAISP*AHLLVW Trigger: CCAAACCAACAGGTGTGCCCAAGGTGAAATTGCTGT...CTCAGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTAAATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCGGTGGTGGGCTGGGATaGGCCCTTTCTTCTTGTACG | + |
|
Preference number: 4 (lower is better) Translates to: FLNRTFIFQLMKQDDGKSGGGLG*ALSSCT Trigger: CGTACAAGAAGAAAGGGCTCATCCCAGCCCACCACC...GGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATTTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 ENSMUST00000119921.8 |
||
| CDS-3UTR TCA 90 bp | AATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTTCTCCTGATGGTATCTaGGCACCTTCACAGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NRTFIFQLMKQDDGKSFPSPDGI*APSQSP Trigger: TGGAGACTGTGAAGGTGCTCAGATACCATCAGGAGA...AGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 ENSMUST00000119921.8 |
||
| CDS-3UTR TCA 90 bp | AATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTACAAGTTGGGCACGCTaGAGGACTCCAGTAAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: NRTFIFQLMKQDDGKSFPTSWAR*RTPVNL Trigger: CAGATTTACTGGAGTCCTTCAGCGTGCCCAACTTGT...AGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
||
| CDS-3UTR TCA 90 bp | AATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTACGAGATGTCATTGGTaGTCCACTCGTTCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NRTFIFQLMKQDDGKSFPTRCHW*STRSPG Trigger: ACCTGGTGAACGAGTGGATCACCAATGACATCTCGT...AGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
||
| CDS-3UTR GCA 90 bp | AATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTCTTGGTGGCAAGTTCTaGCATGATGATTCGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NRTFIFQLMKQDDGKSFPLGGKF*HDDSVV Trigger: CACCACCGAATCATCATGGCAGAACTTGCCACCAAG...AGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 ENSMUST00000119921.8 |
||
| CDS-3UTR CCA 90 bp | TTAAATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCGCACACCTGTTGGTTTaGGCTCTTGGGGCTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LNRTFIFQLMKQDDGKSFAHLLV*ALGASV Trigger: CACAGAAGCCCCAAGAGCCCAAACCAACAGGTGTGC...GAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
||
| CDS-3UTR GCA 90 bp | TTAAATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCAGCTTTGTGGGTAACTaGAGCTGCCAGTTGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LNRTFIFQLMKQDDGKSFSFVGN*SCQLPA Trigger: AGCTGGCAACTGGCAGCTGCAGTTACCCACAAAGCT...GAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 ENSMUST00000119921.8 |
||
| CDS-3UTR GCA 90 bp | AATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTAAGTTGGCCACGATTTaGGTGATGTCCTCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NRTFIFQLMKQDDGKSFPKLATI*VMSSIF Trigger: GAAGATGGAGGACATCACGCAAATCGTGGCCAACTT...AGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
||
| CDS-3UTR CCA 90 bp | AATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTCTCTTGGGGCTTCTGTaGGCTAGAATCTTGCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NRTFIFQLMKQDDGKSFPLLGLL*ARILLL Trigger: CAAAAGCAAGATTCTAGCCCACAGAAGCCCCAAGAG...AGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 ENSMUST00000119921.8 |
||
| CDS-3UTR CCA 90 bp | TTTTTAAATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCGCACACCTGTTGGTTTaGGCTCTTGGGGCTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLNRTFIFQLMKQDDGKSAHLLV*ALGASV Trigger: CACAGAAGCCCCAAGAGCCCAAACCAACAGGTGTGC...GGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATTTAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
||
| CDS-3UTR TCA 90 bp | TTAAATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCACAAGTTGGGCACGCTaGAGGACTCCAGTAAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LNRTFIFQLMKQDDGKSFTSWAR*RTPVNL Trigger: CAGATTTACTGGAGTCCTTCAGCGTGCCCAACTTGT...GAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTAAATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTGGCCACGATTTGCGTaGTGTCCTCCATCTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: FLNRTFIFQLMKQDDGKSWPRFA*CPPSST Trigger: TGTGGAAGATGGAGGACATCACGCAAATCGTGGCCA...GGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATTTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTAAATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCACTGCAGCTGCCAGTTaGCAGCTTCTCCTGATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: FLNRTFIFQLMKQDDGKSTAAAS*QLLLMV Trigger: TACCATCAGGAGAAGCTGGCAACTGGCAGCTGCAGT...GGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATTTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 ENSMUST00000119921.8 |
||
| CDS-3UTR TCA 90 bp | TTTTTAAATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCACGAGATGTCATTGGTaGTCCACTCGTTCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLNRTFIFQLMKQDDGKSTRCHW*STRSPG Trigger: ACCTGGTGAACGAGTGGATCACCAATGACATCTCGT...GGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATTTAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTAAATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCCTTGGTGGCAAGTTCTaGCATGATGATTCGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLNRTFIFQLMKQDDGKSLGGKF*HDDSVV Trigger: CACCACCGAATCATCATGGCAGAACTTGCCACCAAG...GGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATTTAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 ENSMUST00000119921.8 |
||
| CDS-3UTR GCA 90 bp | TTTTTAAATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCAAGTTGGCCACGATTTaGGTGATGTCCTCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLNRTFIFQLMKQDDGKSKLATI*VMSSIF Trigger: GAAGATGGAGGACATCACGCAAATCGTGGCCAACTT...GGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATTTAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
||
| CDS-3UTR CAA 90 bp | GTGCTGGGAGCTGAGTCTGGGTGCTCTGGAAGGGCAGTCTGTGCTCTTAACCTCAACTGCAGCTGCCAGTaGCCAGCTTCTCCTGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: VLGAESGCSGRAVCALNLNCSCQ*PASPDG Trigger: ACCATCAGGAGAAGCTGGCAACTGGCAGCTGCAGTT...GAGGTTAAGAGCACAGACTGCCCTTCCAGAGCACCCAGACTCAGCTCCCAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGCAAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAATGAGCCCTTTCTTCTaGTACGCATCACCGACCGGT | + |
|
Preference number: 5 (lower is better) Translates to: AGKMAQWVRAPDCSSEGPMSPFF*YASPTG Trigger: ACCGGTCGGTGATGCGTACAAGAAGAAAGGGCTCAT...TGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTTGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
||
| CDS-3UTR CAA 90 bp | TCGGTGAGCCTGGCTAGAGTGAGGCTGCTCTTTCTCTTTGTGTGGCAAATGTGTTGTTGGTTTGGGCTCTaGGGGCTTCTGTGGGCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SVSLARVRLLFLFVWQMCCWFGL*GLLWAR Trigger: TCTAGCCCACAGAAGCCCCAAGAGCCCAAACCAACA...ACACATTTGCCACACAAAGAGAAAGAGCAGCCTCACTCTAGCCAGGCTCACCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCTTCCACCTTCCAAGGGCCAGCATTAAAGGTGTGCATTGCCATGCCCAGGCTGTGGGCTAGAATCTaGCTTTTGATCAGCCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: SASTFQGPALKVCIAMPRLWARI*LLISPL Trigger: AAGTGGGCTGATCAAAAGCAAGATTCTAGCCCACAG...CCTGGGCATGGCAATGCACACCTTTAATGCTGGCCCTTGGAAGGTGGAAGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119921.8 |
||
| CDS-3UTR CAA 90 bp | CGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTGAGCACAGAGTGGAATGGTaGTGCTTGGCCTCTGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RTFIFQLMKQDDGKSFPEHRVEW*CLASAA Trigger: CGCCGCAGAGGCCAAGCACAACCATTCCACTCTGTG...CTCAGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
||
| CDS-3UTR CAA 90 bp | CGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTGAGAGCGCCCTCCGGATCTaGGTGGACGAGATGTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: RTFIFQLMKQDDGKSFPESALRI*VDEMSL Trigger: CAATGACATCTCGTCCACCAAGATCCGGAGGGCGCT...CTCAGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
||
| CDS-3UTR CAA 90 bp | CGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTGAGAACTGCAGCTGCCAGTaGCCAGCTTCTCCTGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: RTFIFQLMKQDDGKSFPENCSCQ*PASPDG Trigger: ACCATCAGGAGAAGCTGGCAACTGGCAGCTGCAGTT...CTCAGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 ENSMUST00000119921.8 |
||
| CDS-3UTR CAA 90 bp | CGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTGAGTGTTGGTTTGGGCTCTaGGGGCTTCTGTGGGCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: RTFIFQLMKQDDGKSFPECWFGL*GLLWAR Trigger: TCTAGCCCACAGAAGCCCCAAGAGCCCAAACCAACA...CTCAGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 ENSMUST00000119921.8 |
||
| CDS-3UTR CAA 90 bp | CGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTGAGTCCATCTTCCACAAGTaGGGCACGCTGAAGGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: RTFIFQLMKQDDGKSFPESIFHK*GTLKDS Trigger: GGAGTCCTTCAGCGTGCCCAACTTGTGGAAGATGGA...CTCAGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
||
| CDS-3UTR CAA 90 bp | CGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTGAGATGAGCCCTTTCTTCTaGTACGCATCACCGACCGGT | + |
|
Preference number: 5 (lower is better) Translates to: RTFIFQLMKQDDGKSFPEMSPFF*YASPTG Trigger: ACCGGTCGGTGATGCGTACAAGAAGAAAGGGCTCAT...CTCAGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 ENSMUST00000119921.8 |
||
| CDS-3UTR CAA 90 bp | AATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTAGCGCCCTCCGGATCTaGGTGGACGAGATGTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: NRTFIFQLMKQDDGKSFPSALRI*VDEMSL Trigger: CAATGACATCTCGTCCACCAAGATCCGGAGGGCGCT...AGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
||
| CDS-3UTR CAA 90 bp | AATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTAACTGCAGCTGCCAGTaGCCAGCTTCTCCTGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: NRTFIFQLMKQDDGKSFPNCSCQ*PASPDG Trigger: ACCATCAGGAGAAGCTGGCAACTGGCAGCTGCAGTT...AGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 ENSMUST00000119921.8 |
||
| CDS-3UTR CAA 90 bp | TTAAATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTTGGGCACACCTGTaGGTTTGGGCTCTTGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LNRTFIFQLMKQDDGKSFPWAHL*VWALGA Trigger: AGCCCCAAGAGCCCAAACCAACAGGTGTGCCCAAGG...GAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
||
| CDS-3UTR CAA 90 bp | CGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTGAGAAAGTTGGCCACGATTaGCGTGATGTCCTCCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: RTFIFQLMKQDDGKSFPEKVGHD*RDVLHL Trigger: AAGATGGAGGACATCACGCAAATCGTGGCCAACTTT...CTCAGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTAAATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCCACAGAGTGGAATGGTaGTGCTTGGCCTCTGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: FLNRTFIFQLMKQDDGKSHRVEW*CLASAA Trigger: CGCCGCAGAGGCCAAGCACAACCATTCCACTCTGTG...GGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATTTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
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| CDS-3UTR CAA 90 bp | TTAAATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCTGTTGGTTTGGGCTCTaGGGGCTTCTGTGGGCTAGA | + |
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Preference number: 5 (lower is better) Translates to: LNRTFIFQLMKQDDGKSFCWFGL*GLLWAR Trigger: TCTAGCCCACAGAAGCCCCAAGAGCCCAAACCAACA...GAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 ENSMUST00000119921.8 |
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| CDS-3UTR CAA 90 bp | TTAAATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCTCCATCTTCCACAAGTaGGGCACGCTGAAGGACTCC | + |
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Preference number: 5 (lower is better) Translates to: LNRTFIFQLMKQDDGKSFSIFHK*GTLKDS Trigger: GGAGTCCTTCAGCGTGCCCAACTTGTGGAAGATGGA...GAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
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| CDS-3UTR CAA 90 bp | AATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTCTGTGGGCTAGAATCTaGCTTTTGATCAGCCCACTT | + |
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Preference number: 5 (lower is better) Translates to: NRTFIFQLMKQDDGKSFPLWARI*LLISPL Trigger: AAGTGGGCTGATCAAAAGCAAGATTCTAGCCCACAG...AGGGAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 ENSMUST00000119921.8 |
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| CDS-3UTR CAA 90 bp | TTAAATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCAGATGAGCCCAAAGTaGGCCACGATTTGCGTGATG | + |
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Preference number: 5 (lower is better) Translates to: LNRTFIFQLMKQDDGKSFQMSPK*ATICVM Trigger: CATCACGCAAATCGTGGCCAACTTTGGGCTCATCTG...GAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
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| CDS-3UTR CAA 90 bp | TTAAATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCCTTCGCTCTCCGTGTaGTACAGCTCATGCTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: LNRTFIFQLMKQDDGKSFPSLSV*YSSCFS Trigger: TGAGAAGCATGAGCTGTACAACACGGAGAGCGAAGG...GAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
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| CDS-3UTR CAA 90 bp | TTTTTAAATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCCCTTCGCTCTCCGTGTaGTACAGCTCATGCTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: FLNRTFIFQLMKQDDGKSPSLSV*YSSCFS Trigger: TGAGAAGCATGAGCTGTACAACACGGAGAGCGAAGG...GGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATTTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
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| CDS-3UTR CAA 90 bp | TTAAATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCTTCCTGTGGGCTAGAATCTaGCTTTTGATCAGCCCACTT | + |
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Preference number: 5 (lower is better) Translates to: LNRTFIFQLMKQDDGKSFLWARI*LLISPL Trigger: AAGTGGGCTGATCAAAAGCAAGATTCTAGCCCACAG...GAAGGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 ENSMUST00000119921.8 |
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| CDS-3UTR CAA 90 bp | TTTTTAAATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCCACAGCAATTTCACCTaGGGCACACCTGTTGGTTTG | + |
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Preference number: 5 (lower is better) Translates to: FLNRTFIFQLMKQDDGKSHSNFT*GTPVGL Trigger: CAAACCAACAGGTGTGCCCAAGGTGAAATTGCTGTG...GGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATTTAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
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| CDS-3UTR CAA 90 bp | TTTTTAAATCGAACCTTTATCTTTCAGTTGATGAAACAGGATGATGGCAAGTCCAAAGTTGGCCACGATTaGCGTGATGTCCTCCATCTT | + |
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Preference number: 5 (lower is better) Translates to: FLNRTFIFQLMKQDDGKSKVGHD*RDVLHL Trigger: AAGATGGAGGACATCACGCAAATCGTGGCCAACTTT...GGACTTGCCATCATCCTGTTTCATCAACTGAAAGATAAAGGTTCGATTTAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 |
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| CDS GCA 72 bp | CAGGCTTTTCCAGTGCAGGTGAGCTTTGTGGGTAACTaGAGCTGCCAGTTGCCAGCTTCTCCTGATGGTATC | + |
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Preference number: 6 (lower is better) Translates to: QAFPVQVSFVGN*SCQLPASPDGI Trigger: GATACCATCAGGAGAAGCTGGCAACTGGCAGCTGCAGTTACCCACAAAGCTCACCTGCACTGGAAAAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030845.13 ENSMUST00000105693.2 ENSMUST00000119921.8 |
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