Pregenerated sensors for NME9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046242Ensembl transcript IDs: ENSMUST00000163199.5
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGGGCTAAACCAAGCACATATTGGCGCTCTGGAATCACCTCTGCAGCCTTCTGTCCGACCGGCGTGTACTaGGGGCTCCTCTGGTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: RAKPSTYWRSGITSAAFCPTGVY*GLLWWP Trigger: AGGCCACCAGAGGAGCCCTCAGTACACGCCGGTCGG...ACAGAAGGCTGCAGAGGTGATTCCAGAGCGCCAATATGTGCTTGGTTTAGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| 3UTR GCA 72 bp | ATATTGGCGCTCTGGAATCACCTCTGCAGCCTTCTGTaGCGACCGGCGTGTACTGAGGGCTCCTCTGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: ILALWNHLCSLL*RPACTEGSSGG Trigger: GCCACCAGAGGAGCCCTCAGTACACGCCGGTCGGCACAGAAGGCTGCAGAGGTGATTCCAGAGCGCCAATAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| 3UTR TCA 72 bp | TCACCTCTGCAGCCTTCTGTGCCGACCGGCGTGTACTaGGGGCTCCTCTGGTGGCCTTGTGACTTTGATTCC | + |
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Preference number: 3 (lower is better) Translates to: SPLQPSVPTGVY*GLLWWPCDFDS Trigger: GGAATCAAAGTCACAAGGCCACCAGAGGAGCCCTCAGTACACGCCGGTCGGCACAGAAGGCTGCAGAGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| 3UTR CCA 72 bp | CGTTGTCCACAGAATAGGGCTAAACCAAGCACATATTaGCGCTCTGGAATCACCTCTGCAGCCTTCTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: RCPQNRAKPSTY*RSGITSAAFCA Trigger: GGCACAGAAGGCTGCAGAGGTGATTCCAGAGCGCCAATATGTGCTTGGTTTAGCCCTATTCTGTGGACAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR TCA 90 bp | TGGCGCTCTGGAATCACCTCTGCAGCCTTCTGTGCCGACCGGCGTGTACTGAGGTGCCCTCGGTCTTGGTaGGAATCAGGAGGTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: WRSGITSAAFCADRRVLRCPRSW*ESGGGW Trigger: CCAGCCACCTCCTGATTCTCACCAAGACCGAGGGCA...CCTCAGTACACGCCGGTCGGCACAGAAGGCTGCAGAGGTGATTCCAGAGCGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR CCA 90 bp | TGGCGCTCTGGAATCACCTCTGCAGCCTTCTGTGCCGACCGGCGTGTACTGAGGCGGGATGTTCCCTCCTaGCCACATTGGGGTCACAAG | + |
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Preference number: 4 (lower is better) Translates to: WRSGITSAAFCADRRVLRRDVPS*PHWGHK Trigger: CTTGTGACCCCAATGTGGCCAGGAGGGAACATCCCG...CCTCAGTACACGCCGGTCGGCACAGAAGGCTGCAGAGGTGATTCCAGAGCGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR TCA 90 bp | GGAATCACCTCTGCAGCCTTCTGTGCCGACCGGCGTGTACTGAGGGCTCCTCTGTGTAAGATGGTCTTCTaGAGCAGGGTGGGGTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: GITSAAFCADRRVLRAPLCKMVF*SRVGLA Trigger: AGCCAACCCCACCCTGCTTCAGAAGACCATCTTACA...CAGAGGAGCCCTCAGTACACGCCGGTCGGCACAGAAGGCTGCAGAGGTGATTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR CCA 90 bp | AAACCAAGCACATATTGGCGCTCTGGAATCACCTCTGCAGCCTTCTGTGCCGACGCGCCAGCTCTCTGTTaGCGTCCTCTCTGTCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: KPSTYWRSGITSAAFCADAPALC*RPLCPG Trigger: GCCGGGACAGAGAGGACGCCAACAGAGAGCTGGCGC...GTCGGCACAGAAGGCTGCAGAGGTGATTCCAGAGCGCCAATATGTGCTTGGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR CCA 90 bp | ATCACCTCTGCAGCCTTCTGTGCCGACCGGCGTGTACTGAGGGCTCCTCTGGTGTCTTCCCAAAGCTCCTaGGTGTTGATGTTGACCTGC | + |
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Preference number: 4 (lower is better) Translates to: ITSAAFCADRRVLRAPLVSSQSS*VLMLTC Trigger: GCAGGTCAACATCAACACCCAGGAGCTTTGGGAAGA...CACCAGAGGAGCCCTCAGTACACGCCGGTCGGCACAGAAGGCTGCAGAGGTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR TCA 90 bp | ATATTGGCGCTCTGGAATCACCTCTGCAGCCTTCTGTGCCGACCGGCGTGTACTATTTCTGTGCCGTACTaGGCCCGGAGACTTTCGGGA | + |
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Preference number: 4 (lower is better) Translates to: ILALWNHLCSLLCRPACTISVPY*ARRLSG Trigger: TCCCGAAAGTCTCCGGGCTCAGTACGGCACAGAAAT...AGTACACGCCGGTCGGCACAGAAGGCTGCAGAGGTGATTCCAGAGCGCCAATAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR GCA 90 bp | ATCACCTCTGCAGCCTTCTGTGCCGACCGGCGTGTACTGAGGGCTCCTCTGGTGCTGTCCCGGCTTCCATaGACAGCATTAAAAGGCATT | + |
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Preference number: 4 (lower is better) Translates to: ITSAAFCADRRVLRAPLVLSRLP*TALKGI Trigger: AATGCCTTTTAATGCTGTGCATGGAAGCCGGGACAG...CACCAGAGGAGCCCTCAGTACACGCCGGTCGGCACAGAAGGCTGCAGAGGTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR CCA 90 bp | GGAATCACCTCTGCAGCCTTCTGTGCCGACCGGCGTGTACTGAGGGCTCCTCTGATGGGCCACTGCATCTaGCTTAATGATGCCCAATGT | + |
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Preference number: 4 (lower is better) Translates to: GITSAAFCADRRVLRAPLMGHCI*LNDAQC Trigger: ACATTGGGCATCATTAAGCCAGATGCAGTGGCCCAT...CAGAGGAGCCCTCAGTACACGCCGGTCGGCACAGAAGGCTGCAGAGGTGATTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR GCA 90 bp | GGAATCACCTCTGCAGCCTTCTGTGCCGACCGGCGTGTACTGAGGGCTCCTCTGGTGTTGATGTTGACCTaGAGGGCAATTTCCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: GITSAAFCADRRVLRAPLVLMLT*RAISFF Trigger: GAAGAAGGAAATTGCCCTGCAGGTCAACATCAACAC...CAGAGGAGCCCTCAGTACACGCCGGTCGGCACAGAAGGCTGCAGAGGTGATTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR CCA 90 bp | CCAAGCACATATTGGCGCTCTGGAATCACCTCTGCAGCCTTCTGTGCCGACCGGGGCTCGCACTTCCCTTaGTACTTTTCCAGAACATCA | + |
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Preference number: 4 (lower is better) Translates to: PSTYWRSGITSAAFCADRGSHFP*YFSRTS Trigger: TGATGTTCTGGAAAAGTACCAAGGGAAGTGCGAGCC...CCGGTCGGCACAGAAGGCTGCAGAGGTGATTCCAGAGCGCCAATATGTGCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR CCA 90 bp | CTCTGGAATCACCTCTGCAGCCTTCTGTGCCGACCGGCGTGTACTGAGGGCTCCATAAAACAGAAAGGTTaGCTCGCACTTCCCTTGGTA | + |
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Preference number: 4 (lower is better) Translates to: LWNHLCSLLCRPACTEGSIKQKG*LALPLV Trigger: TACCAAGGGAAGTGCGAGCCAACCTTTCTGTTTTAT...GGAGCCCTCAGTACACGCCGGTCGGCACAGAAGGCTGCAGAGGTGATTCCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR CCA 90 bp | AGGGCTAAACCAAGCACATATTGGCGCTCTGGAATCACCTCTGCAGCCTTCTGTGTGAGAATCAGGAGGTaGCTGGGTCCGCTGCACATG | + |
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Preference number: 4 (lower is better) Translates to: RAKPSTYWRSGITSAAFCVRIRR*LGPLHM Trigger: CATGTGCAGCGGACCCAGCCACCTCCTGATTCTCAC...ACAGAAGGCTGCAGAGGTGATTCCAGAGCGCCAATATGTGCTTGGTTTAGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR TCA 90 bp | ATCACCTCTGCAGCCTTCTGTGCCGACCGGCGTGTACTGAGGGCTCCTCTGGTGTTCCTTGTCTTTATCTaGGAACTTGAAACTGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: ITSAAFCADRRVLRAPLVFLVFI*ELETGE Trigger: TTCCCCAGTTTCAAGTTCTCAGATAAAGACAAGGAA...CACCAGAGGAGCCCTCAGTACACGCCGGTCGGCACAGAAGGCTGCAGAGGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR GCA 90 bp | AATAGGGCTAAACCAAGCACATATTGGCGCTCTGGAATCACCTCTGCAGCCTTCGGTGGCTGGGTCCGCTaGACATGTGATGTACTAGCC | + |
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Preference number: 4 (lower is better) Translates to: NRAKPSTYWRSGITSAAFGGWVR*TCDVLA Trigger: GGCTAGTACATCACATGTGCAGCGGACCCAGCCACC...GAAGGCTGCAGAGGTGATTCCAGAGCGCCAATATGTGCTTGGTTTAGCCCTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR GCA 90 bp | AATAGGGCTAAACCAAGCACATATTGGCGCTCTGGAATCACCTCTGCAGCCTTCGGGAGGCCACTTGAGTaGACCCAGAAGTTCCTCATC | + |
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Preference number: 4 (lower is better) Translates to: NRAKPSTYWRSGITSAAFGRPLE*TQKFLI Trigger: GATGAGGAACTTCTGGGTGCACTCAAGTGGCCTCCC...GAAGGCTGCAGAGGTGATTCCAGAGCGCCAATATGTGCTTGGTTTAGCCCTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR CCA 90 bp | CACAGAATAGGGCTAAACCAAGCACATATTGGCGCTCTGGAATCACCTCTGCAGGAATCAGGAGGTGGCTaGGTCCGCTGCACATGTGAT | + |
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Preference number: 4 (lower is better) Translates to: HRIGLNQAHIGALESPLQESGGG*VRCTCD Trigger: ATCACATGTGCAGCGGACCCAGCCACCTCCTGATTC...CTGCAGAGGTGATTCCAGAGCGCCAATATGTGCTTGGTTTAGCCCTATTCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR GCA 90 bp | AATAGGGCTAAACCAAGCACATATTGGCGCTCTGGAATCACCTCTGCAGCCTTCCTTCCCATGGGCCACTaGATCTGGCTTAATGATGCC | + |
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Preference number: 4 (lower is better) Translates to: NRAKPSTYWRSGITSAAFLPMGH*IWLNDA Trigger: GGCATCATTAAGCCAGATGCAGTGGCCCATGGGAAG...GAAGGCTGCAGAGGTGATTCCAGAGCGCCAATATGTGCTTGGTTTAGCCCTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR CCA 90 bp | AATAGGGCTAAACCAAGCACATATTGGCGCTCTGGAATCACCTCTGCAGCCTTCAGCCTCAGCACCCGGTaGAGCTTCCTTGTCTTTATC | + |
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Preference number: 4 (lower is better) Translates to: NRAKPSTYWRSGITSAAFSLSTR*SFLVFI Trigger: GATAAAGACAAGGAAGCTCCACCGGGTGCTGAGGCT...GAAGGCTGCAGAGGTGATTCCAGAGCGCCAATATGTGCTTGGTTTAGCCCTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR TCA 90 bp | CACAGAATAGGGCTAAACCAAGCACATATTGGCGCTCTGGAATCACCTCTGCAGCTTTATCTGAGAACTTaGAACTGGGGAAGAGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: HRIGLNQAHIGALESPLQLYLRT*NWGRAA Trigger: CGCTGCTCTTCCCCAGTTTCAAGTTCTCAGATAAAG...CTGCAGAGGTGATTCCAGAGCGCCAATATGTGCTTGGTTTAGCCCTATTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR CCA 90 bp | AGGGCTAAACCAAGCACATATTGGCGCTCTGGAATCACCTCTGCAGCCTTCTGTTCGATCCTCATCTTTTaGAAGAGGCTAACCATGGGT | + |
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Preference number: 4 (lower is better) Translates to: RAKPSTYWRSGITSAAFCSILIF*KRLTMG Trigger: ACCCATGGTTAGCCTCTTCCAAAAGATGAGGATCGA...ACAGAAGGCTGCAGAGGTGATTCCAGAGCGCCAATATGTGCTTGGTTTAGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR CCA 90 bp | CACAGAATAGGGCTAAACCAAGCACATATTGGCGCTCTGGAATCACCTCTGCAGCAAATGCCTCCTCTCTaGCTCTGTGTTGATAGAACG | + |
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Preference number: 4 (lower is better) Translates to: HRIGLNQAHIGALESPLQQMPPL*LCVDRT Trigger: CGTTCTATCAACACAGAGCCAGAGAGGAGGCATTTG...CTGCAGAGGTGATTCCAGAGCGCCAATATGTGCTTGGTTTAGCCCTATTCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR CAA 90 bp | TCTGGAATCACCTCTGCAGCCTTCTGTGCCGACCGGCGTGTACTGAGGGCTCCTAGCGCCAGCTCTCTGTaGGCGTCCTCTCTGTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: SGITSAAFCADRRVLRAPSASSL*ASSLSR Trigger: CCGGGACAGAGAGGACGCCAACAGAGAGCTGGCGCT...AGGAGCCCTCAGTACACGCCGGTCGGCACAGAAGGCTGCAGAGGTGATTCCAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR CAA 90 bp | GGAATCACCTCTGCAGCCTTCTGTGCCGACCGGCGTGTACTGAGGGCTCCTCTGAGGCTAACCATGGGTTaGCAGGGTCCACACCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: GITSAAFCADRRVLRAPLRLTMG*QGPHQP Trigger: GGGCTGGTGTGGACCCTGCAAACCCATGGTTAGCCT...CAGAGGAGCCCTCAGTACACGCCGGTCGGCACAGAAGGCTGCAGAGGTGATTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR CAA 90 bp | TGGCGCTCTGGAATCACCTCTGCAGCCTTCTGTGCCGACCGGCGTGTACTGAGGTCGGTGCCCTCGGTCTaGGTGAGAATCAGGAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: WRSGITSAAFCADRRVLRSVPSV*VRIRRW Trigger: CCACCTCCTGATTCTCACCAAGACCGAGGGCACCGA...CCTCAGTACACGCCGGTCGGCACAGAAGGCTGCAGAGGTGATTCCAGAGCGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS TCA 90 bp | GCCGGAACCTTCTTTTCCGCCTCCAGCTGCTGTAAGATGGTCTTCTaGAGCAGGGTGGGGTTGGCTCCCTTCACCACAGCCACCAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: AGTFFSASSCCKMVF*SRVGLAPFTTATSS Trigger: AGAGCTGGTGGCTGTGGTGAAGGGAGCCAACCCCACCCTGCTTCAGAAGACCATCTTACAGCAGCTGGAGGCGGAAAAGAAGGTTCCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR CAA 90 bp | TGGCGCTCTGGAATCACCTCTGCAGCCTTCTGTGCCGACCGGCGTGTACTGAGGCTCGATCCTCATCTTTaGGAAGAGGCTAACCATGGG | + |
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Preference number: 5 (lower is better) Translates to: WRSGITSAAFCADRRVLRLDPHL*EEANHG Trigger: CCCATGGTTAGCCTCTTCCAAAAGATGAGGATCGAG...CCTCAGTACACGCCGGTCGGCACAGAAGGCTGCAGAGGTGATTCCAGAGCGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR CAA 90 bp | GGAATCACCTCTGCAGCCTTCTGTGCCGACCGGCGTGTACTGAGGGCTCCTCTGCCCGGTGGAGCTTCCTaGTCTTTATCTGAGAACTTG | + |
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Preference number: 5 (lower is better) Translates to: GITSAAFCADRRVLRAPLPGGAS*SLSENL Trigger: CAAGTTCTCAGATAAAGACAAGGAAGCTCCACCGGG...CAGAGGAGCCCTCAGTACACGCCGGTCGGCACAGAAGGCTGCAGAGGTGATTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR CAA 90 bp | TCTGGAATCACCTCTGCAGCCTTCTGTGCCGACCGGCGTGTACTGAGGGCTCCTTGGCTCGCACTTCCCTaGGTACTTTTCCAGAACATC | + |
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Preference number: 5 (lower is better) Translates to: SGITSAAFCADRRVLRAPWLALP*VLFQNI Trigger: GATGTTCTGGAAAAGTACCAAGGGAAGTGCGAGCCA...AGGAGCCCTCAGTACACGCCGGTCGGCACAGAAGGCTGCAGAGGTGATTCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR CAA 90 bp | ATCACCTCTGCAGCCTTCTGTGCCGACCGGCGTGTACTGAGGGCTCCTCTGGTGGTGTTGATAGAACGCTaGCATTTCTGCCTCTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: ITSAAFCADRRVLRAPLVVLIER*HFCLCQ Trigger: CTGACAGAGGCAGAAATGCAAGCGTTCTATCAACAC...CACCAGAGGAGCCCTCAGTACACGCCGGTCGGCACAGAAGGCTGCAGAGGTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS TCA 90 bp | ATACGCTCAGACATGCAAGGGTCCTCCACGGGGCCCACCATAGTTTaGGCCTCAGCACCCGGTGGAGCTTCCTTGTCTTTATCTGAGAAC | + |
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Preference number: 5 (lower is better) Translates to: IRSDMQGSSTGPTIV*ASAPGGASLSLSEN Trigger: GTTCTCAGATAAAGACAAGGAAGCTCCACCGGGTGCTGAGGCTCAAACTATGGTGGGCCCCGTGGAGGACCCTTGCATGTCTGAGCGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS CCA 90 bp | CCGCCTCCAGCTGCTGTAAGATGGTCTTCTGAAGCAGGGTGGGGTTaGCTCCCTTCACCACAGCCACCAGCTCTCCTCTTGTATAAAACA | + |
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Preference number: 5 (lower is better) Translates to: PPPAAVRWSSEAGWG*LPSPQPPALLLYKT Trigger: TGTTTTATACAAGAGGAGAGCTGGTGGCTGTGGTGAAGGGAGCCAACCCCACCCTGCTTCAGAAGACCATCTTACAGCAGCTGGAGGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS CCA 90 bp | TCTTTTCCGCCTCCAGCTGCTGTAAGATGGTCTTCTGAAGCAGGGTaGGGTTGGCTCCCTTCACCACAGCCACCAGCTCTCCTCTTGTAT | + |
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Preference number: 5 (lower is better) Translates to: SFPPPAAVRWSSEAG*GWLPSPQPPALLLY Trigger: ATACAAGAGGAGAGCTGGTGGCTGTGGTGAAGGGAGCCAACCCCACCCTGCTTCAGAAGACCATCTTACAGCAGCTGGAGGCGGAAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR CAA 90 bp | GGAATCACCTCTGCAGCCTTCTGTGCCGACCGGCGTGTACTGAGGGCTCCTCTGTATAAAACAGAAAGGTaGGCTCGCACTTCCCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: GITSAAFCADRRVLRAPLYKTER*ARTSLG Trigger: ACCAAGGGAAGTGCGAGCCAACCTTTCTGTTTTATA...CAGAGGAGCCCTCAGTACACGCCGGTCGGCACAGAAGGCTGCAGAGGTGATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR CAA 90 bp | TGGCGCTCTGGAATCACCTCTGCAGCCTTCTGTGCCGACCGGCGTGTACTGAGGCCACCAGCTCTCCTCTaGTATAAAACAGAAAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: WRSGITSAAFCADRRVLRPPALL*YKTERL Trigger: CAACCTTTCTGTTTTATACAAGAGGAGAGCTGGTGG...CCTCAGTACACGCCGGTCGGCACAGAAGGCTGCAGAGGTGATTCCAGAGCGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS GCA 90 bp | TGGCTCGCACTTCCCTTGGTACTTTTCCAGAACATCAAGGCGGTCTaGCTCTGCCGAAGCAAAATGGAGACGGTCCAAGCCAACCTCGAT | + |
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Preference number: 5 (lower is better) Translates to: WLALPLVLFQNIKAV*LCRSKMETVQANLD Trigger: ATCGAGGTTGGCTTGGACCGTCTCCATTTTGCTTCGGCAGAGGCAGACCGCCTTGATGTTCTGGAAAAGTACCAAGGGAAGTGCGAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS CCA 90 bp | GAAGCAAAATGGAGACGGTCCAAGCCAACCTCGATCCTCATCTTTTaGAAGAGGCTAACCATGGGTTTGCAGGGTCCACACCAGCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: EAKWRRSKPTSILIF*KRLTMGLQGPHQPW Trigger: CCAGGGCTGGTGTGGACCCTGCAAACCCATGGTTAGCCTCTTCCAAAAGATGAGGATCGAGGTTGGCTTGGACCGTCTCCATTTTGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR CAA 90 bp | AAACCAAGCACATATTGGCGCTCTGGAATCACCTCTGCAGCCTTCTGTGCCGACCAAAGCTCCTGGGTGTaGATGTTGACCTGCAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: KPSTYWRSGITSAAFCADQSSWV*MLTCRA Trigger: TGCCCTGCAGGTCAACATCAACACCCAGGAGCTTTG...GTCGGCACAGAAGGCTGCAGAGGTGATTCCAGAGCGCCAATATGTGCTTGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR CAA 90 bp | TCTGGAATCACCTCTGCAGCCTTCTGTGCCGACCGGCGTGTACTGAGGGCTCCTTCTTTATCTGAGAACTaGAAACTGGGGAAGAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: SGITSAAFCADRRVLRAPSLSEN*KLGKSS Trigger: GCTGCTCTTCCCCAGTTTCAAGTTCTCAGATAAAGA...AGGAGCCCTCAGTACACGCCGGTCGGCACAGAAGGCTGCAGAGGTGATTCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS GCA 90 bp | GCACTTCCCTTGGTACTTTTCCAGAACATCAAGGCGGTCTGCCTCTaGCGAAGCAAAATGGAGACGGTCCAAGCCAACCTCGATCCTCAT | + |
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Preference number: 5 (lower is better) Translates to: ALPLVLFQNIKAVCL*RSKMETVQANLDPH Trigger: ATGAGGATCGAGGTTGGCTTGGACCGTCTCCATTTTGCTTCGGCAGAGGCAGACCGCCTTGATGTTCTGGAAAAGTACCAAGGGAAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS CCA 90 bp | CTTCACCACAGCCACCAGCTCTCCTCTTGTATAAAACAGAAAGGTTaGCTCGCACTTCCCTTGGTACTTTTCCAGAACATCAAGGCGGTC | + |
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Preference number: 5 (lower is better) Translates to: LHHSHQLSSCIKQKG*LALPLVLFQNIKAV Trigger: GACCGCCTTGATGTTCTGGAAAAGTACCAAGGGAAGTGCGAGCCAACCTTTCTGTTTTATACAAGAGGAGAGCTGGTGGCTGTGGTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS CCA 90 bp | AATCCTGCTTCCTGGATCTTCATGATGATTTCCTCAGCCTTCCCATaGGCCACTGCATCTGGCTTAATGATGCCCAATGTACAGGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: NPASWIFMMISSAFP*ATASGLMMPNVQVF Trigger: AAAGACCTGTACATTGGGCATCATTAAGCCAGATGCAGTGGCCCATGGGAAGGCTGAGGAAATCATCATGAAGATCCAGGAAGCAGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS-3UTR CAA 90 bp | GACTGTTTAATAAGGCAGAGACGTATGGACAGTTGTTTCCGTTGTCCACAGAATCTCTCTGGCTCTGTGTaGATAGAACGCTTGCATTTC | + |
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Preference number: 5 (lower is better) Translates to: DCLIRQRRMDSCFRCPQNLSGSV*IERLHF Trigger: GAAATGCAAGCGTTCTATCAACACAGAGCCAGAGAG...ATTCTGTGGACAACGGAAACAACTGTCCATACGTCTCTGCCTTATTAAACAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS CAA 72 bp | CGCCAAGCGGTGACTACATCCTCGGTGCCCTCGGTCTaGGTGAGAATCAGGAGGTGGCTGGGTCCGCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: RQAVTTSSVPSV*VRIRRWLGPLH Trigger: GTGCAGCGGACCCAGCCACCTCCTGATTCTCACCAAGACCGAGGGCACCGAGGATGTAGTCACCGCTTGGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS CCA 72 bp | CGTACTGAGCCCGGAGACTTTCGGGATGTTCCCTCCTaGCCACATTGGGGTCACAAGGTCCCAGGAAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: RTEPGDFRDVPS*PHWGHKVPGRF Trigger: GAACCTTCCTGGGACCTTGTGACCCCAATGTGGCCAGGAGGGAACATCCCGAAAGTCTCCGGGCTCAGTACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS TCA 72 bp | GACATGCAAGGGTCCTCCACGGGGCCCACCATAGTTTaGGCCTCAGCACCCGGTGGAGCTTCCTTGTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: DMQGSSTGPTIV*ASAPGGASLSL Trigger: TAAAGACAAGGAAGCTCCACCGGGTGCTGAGGCTCAAACTATGGTGGGCCCCGTGGAGGACCCTTGCATGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS CAA 72 bp | AACTTGAAACTGGGGAAGAGCAGCGCCAGCTCTCTGTaGGCGTCCTCTCTGTCCCGGCTTCCATGCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: NLKLGKSSASSL*ASSLSRLPCTA Trigger: TGCTGTGCATGGAAGCCGGGACAGAGAGGACGCCAACAGAGAGCTGGCGCTGCTCTTCCCCAGTTTCAAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS CAA 72 bp | AGACATGCAAGGGTCCTCCACGGGGCCCACCATAGTTaGAGCCTCAGCACCCGGTGGAGCTTCCTTGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: RHARVLHGAHHS*SLSTRWSFLVF Trigger: AAAGACAAGGAAGCTCCACCGGGTGCTGAGGCTCAAACTATGGTGGGCCCCGTGGAGGACCCTTGCATGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS TCA 72 bp | TTCTTTTCCGCCTCCAGCTGCTGTAAGATGGTCTTCTaGAGCAGGGTGGGGTTGGCTCCCTTCACCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: FFSASSCCKMVF*SRVGLAPFTTA Trigger: GGCTGTGGTGAAGGGAGCCAACCCCACCCTGCTTCAGAAGACCATCTTACAGCAGCTGGAGGCGGAAAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS TCA 72 bp | GTGAGAATCAGGAGGTGGCTGGGTCCGCTGCACATGTaGTGTACTAGCCTCTCAAATGCCTCCTCTCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: VRIRRWLGPLHM*CTSLSNASSLA Trigger: AGCCAGAGAGGAGGCATTTGAGAGGCTAGTACATCACATGTGCAGCGGACCCAGCCACCTCCTGATTCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS CAA 90 bp | CGAAGCAAAATGGAGACGGTCCAAGCCAACCTCGATCCTCATCTTTaGGAAGAGGCTAACCATGGGTTTGCAGGGTCCACACCAGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: RSKMETVQANLDPHL*EEANHGFAGSTPAL Trigger: CAGGGCTGGTGTGGACCCTGCAAACCCATGGTTAGCCTCTTCCAAAAGATGAGGATCGAGGTTGGCTTGGACCGTCTCCATTTTGCTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS CCA 72 bp | TGGAGACGGTCCAAGCCAACCTCGATCCTCATCTTTTaGAAGAGGCTAACCATGGGTTTGCAGGGTCCACAC | + |
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Preference number: 6 (lower is better) Translates to: WRRSKPTSILIF*KRLTMGLQGPH Trigger: GTGTGGACCCTGCAAACCCATGGTTAGCCTCTTCCAAAAGATGAGGATCGAGGTTGGCTTGGACCGTCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS CAA 90 bp | TTATCTGAGAACTTGAAACTGGGGAAGAGCAGCGCCAGCTCTCTGTaGGCGTCCTCTCTGTCCCGGCTTCCATGCACAGCATTAAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: LSENLKLGKSSASSL*ASSLSRLPCTALKG Trigger: GCCTTTTAATGCTGTGCATGGAAGCCGGGACAGAGAGGACGCCAACAGAGAGCTGGCGCTGCTCTTCCCCAGTTTCAAGTTCTCAGATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS CAA 72 bp | ATGGAGACGGTCCAAGCCAACCTCGATCCTCATCTTTaGGAAGAGGCTAACCATGGGTTTGCAGGGTCCACA | + |
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Preference number: 6 (lower is better) Translates to: METVQANLDPHL*EEANHGFAGST Trigger: TGTGGACCCTGCAAACCCATGGTTAGCCTCTTCCAAAAGATGAGGATCGAGGTTGGCTTGGACCGTCTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS CAA 90 bp | CAGCTCTCCTCTTGTATAAAACAGAAAGGTTGGCTCGCACTTCCCTaGGTACTTTTCCAGAACATCAAGGCGGTCTGCCTCTGCCGAAGC | + |
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Preference number: 6 (lower is better) Translates to: QLSSCIKQKGWLALP*VLFQNIKAVCLCRS Trigger: GCTTCGGCAGAGGCAGACCGCCTTGATGTTCTGGAAAAGTACCAAGGGAAGTGCGAGCCAACCTTTCTGTTTTATACAAGAGGAGAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS CAA 90 bp | CCTTCACCACAGCCACCAGCTCTCCTCTTGTATAAAACAGAAAGGTaGGCTCGCACTTCCCTTGGTACTTTTCCAGAACATCAAGGCGGT | + |
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Preference number: 6 (lower is better) Translates to: PSPQPPALLLYKTER*ARTSLGTFPEHQGG Trigger: ACCGCCTTGATGTTCTGGAAAAGTACCAAGGGAAGTGCGAGCCAACCTTTCTGTTTTATACAAGAGGAGAGCTGGTGGCTGTGGTGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS GCA 72 bp | CTTCATGATGATTTCCTCAGCCTTCCCATGGGCCACTaGATCTGGCTTAATGATGCCCAATGTACAGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LHDDFLSLPMGH*IWLNDAQCTGL Trigger: AAGACCTGTACATTGGGCATCATTAAGCCAGATGCAGTGGCCCATGGGAAGGCTGAGGAAATCATCATGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS CCA 72 bp | AGCCACCAGCTCTCCTCTTGTATAAAACAGAAAGGTTaGCTCGCACTTCCCTTGGTACTTTTCCAGAACATC | + |
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Preference number: 6 (lower is better) Translates to: SHQLSSCIKQKG*LALPLVLFQNI Trigger: GATGTTCTGGAAAAGTACCAAGGGAAGTGCGAGCCAACCTTTCTGTTTTATACAAGAGGAGAGCTGGTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS CAA 72 bp | TCTTGTATAAAACAGAAAGGTTGGCTCGCACTTCCCTaGGTACTTTTCCAGAACATCAAGGCGGTCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SCIKQKGWLALP*VLFQNIKAVCL Trigger: GAGGCAGACCGCCTTGATGTTCTGGAAAAGTACCAAGGGAAGTGCGAGCCAACCTTTCTGTTTTATACAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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| CDS CAA 72 bp | CAGCCACCAGCTCTCCTCTTGTATAAAACAGAAAGGTaGGCTCGCACTTCCCTTGGTACTTTTCCAGAACAT | + |
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Preference number: 6 (lower is better) Translates to: QPPALLLYKTER*ARTSLGTFPEH Trigger: ATGTTCTGGAAAAGTACCAAGGGAAGTGCGAGCCAACCTTTCTGTTTTATACAAGAGGAGAGCTGGTGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163199.5 |
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