Pregenerated sensors for NME8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041138Ensembl transcript IDs: ENSMUST00000039340.15, ENSMUST00000091763.3, ENSMUST00000223466.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGTCTCGTGGTTTTACGTTGATGAAAACTTCTTCATTACCTCCTTaGGCTTCTGTGAATCTAGTATTTGTGCTAGTTCTCAGGATTACC | + |
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Preference number: 1 (lower is better) Translates to: VSRGFTLMKTSSLPP*ASVNLVFVLVLRIT Trigger: GGTAATCCTGAGAACTAGCACAAATACTAGATTCACAGAAGCTCAAGGAGGTAATGAAGAAGTTTTCATCAACGTAAAACCACGAGACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223466.2 |
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| 3UTR-3UTR TCA 90 bp | ATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGTCTTCATTACCTCCTTaGGCTTCTGTGAATCTAGTA | + |
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Preference number: 2 (lower is better) Translates to: IVTMHSQASFHLHVCFPWSSLPP*ASVNLV Trigger: TACTAGATTCACAGAAGCTCAAGGAGGTAATGAAGA...CCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| 3UTR-3UTR CAA 90 bp | GGGTCACAGTTTTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTTCTTCATTACCTCCTaGAGCTTCTGTGAATCTAGT | + |
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Preference number: 3 (lower is better) Translates to: GSQFLLLPCIARQVFISMFFITS*SFCESS Trigger: ACTAGATTCACAGAAGCTCAAGGAGGTAATGAAGAA...CATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAAAACTGTGACCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| 3UTR-3UTR CAA 90 bp | GTCACAGTTTTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTTCTTCATTACCTCCTaGAGCTTCTGTGAATCTAGT | + |
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Preference number: 3 (lower is better) Translates to: VTVFIVTMHSQASFHLHVFFITS*SFCESS Trigger: ACTAGATTCACAGAAGCTCAAGGAGGTAATGAAGAA...CACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAAAACTGTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR GCA 90 bp | CCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTCATTAACTTTGCACGGCTTTaGAAGGTCCACACCAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: PCIARQVFISMCVFLGVINFARL*KVHTRL Trigger: AAGCCTGGTGTGGACCTTGCAAAGCCGTGCAAAGTT...AATGACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
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| CDS-3UTR GCA 90 bp | CCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTCATTATGAGGCTTGATCAATaGAAGTGTGCTCTGGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PCIARQVFISMCVFLGVIMRLDQ*KCALGR Trigger: CCTCCCCAGAGCACACTTGCATTGATCAAGCCTCAT...AATGACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR GCA 90 bp | GTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTTGCTCTGGAGTCAGGTaGATTTCCTTCATCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: VTMHSQASFHLHVCFPWSCSGVR*ISFIRV Trigger: GACCCTGATGAAGGAAATGCACCTGACTCCAGAGCA...ACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR GCA 90 bp | GTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTTGGGGAGAGCAGTTTTaGTTCTTCTGGGTCTACTGG | + |
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Preference number: 4 (lower is better) Translates to: VTMHSQASFHLHVCFPWSWGEQF*FFWVYW Trigger: CCAGTAGACCCAGAAGAAGCAAAACTGCTCTCCCCA...ACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR CCA 90 bp | ATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTCATTTTGGCTCGGAGGGATTCTaGGGAGAGCAGTTTTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: MHSQASFHLHVCFPWSHFGSEGF*GEQFCF Trigger: GAAGCAAAACTGCTCTCCCCAGAATCCCTCCGAGCC...AAAATGACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR GCA 90 bp | ACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTCATCATTCGCCTCCATTCTaGAACAGCATTCCACTTGGT | + |
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Preference number: 4 (lower is better) Translates to: TMHSQASFHLHVCFPWSHHSPPF*NSIPLG Trigger: ACCAAGTGGAATGCTGTTGCAGAATGGAGGCGAATG...ATGACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091763.3 |
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| CDS-3UTR CCA 90 bp | TTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGCTCGGAGGGATTCTaGGGAGAGCAGTTTTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: LLLPCIARQVFISMCVFLGSEGF*GEQFCF Trigger: GAAGCAAAACTGCTCTCCCCAGAATCCCTCCGAGCC...AAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR TCA 90 bp | GGGTCACAGTTTTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGGGGAGAGTTTCTTCCTaGATAACCTCGGAGTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GSQFLLLPCIARQVFISMGRVSS*ITSESS Trigger: AGAAGACTCCGAGGTTATTCAGGAAGAAACTCTCCC...CATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAAAACTGTGACCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
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| CDS-3UTR TCA 90 bp | ATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGGGGAGAGTTTCTTCCTaGATAACCTCGGAGTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: IVTMHSQASFHLHVCFPWGRVSS*ITSESS Trigger: AGAAGACTCCGAGGTTATTCAGGAAGAAACTCTCCC...CCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
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| CDS-3UTR GCA 90 bp | TGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTCATTTTTATGAGGCTTGATCAATaGAAGTGTGCTCTGGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: CIARQVFISMCVFLGVIFMRLDQ*KCALGR Trigger: CCTCCCCAGAGCACACTTGCATTGATCAAGCCTCAT...AAAAATGACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR GCA 90 bp | GTCACAGTTTTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGGGGAGAGCAGTTTTaGTTCTTCTGGGTCTACTGG | + |
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Preference number: 4 (lower is better) Translates to: VTVFIVTMHSQASFHLHVWGEQF*FFWVYW Trigger: CCAGTAGACCCAGAAGAAGCAAAACTGCTCTCCCCA...CACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAAAACTGTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR CCA 90 bp | TGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTCATTTTTAATGCAAGTGTGCTCTaGGGAGGGAAGAAATGCGCT | + |
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Preference number: 4 (lower is better) Translates to: CIARQVFISMCVFLGVIFNASVL*GGKKCA Trigger: AGCGCATTTCTTCCCTCCCCAGAGCACACTTGCATT...AAAAATGACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR TCA 90 bp | GTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTCTCCTTGAGCTTCTGTaGATTCTTTCTTTGTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: VTMHSQASFHLHVCFPWSLLELL*ILSLCV Trigger: GACACACAAAGAAAGAATTCACAGAAGCTCAAGGAG...ACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039340.15 |
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| CDS-3UTR GCA 90 bp | TTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTAACTTTGCACGGCTTTaGAAGGTCCACACCAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: FIVTMHSQASFHLHVCFPNFARL*KVHTRL Trigger: AAGCCTGGTGTGGACCTTGCAAAGCCGTGCAAAGTT...AGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
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| CDS-3UTR GCA 90 bp | TGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTCATTTTTTGGGGAGGGAAGAAATaGGCTATTTCCTTCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: CIARQVFISMCVFLGVIFWGGKK*AISFSA Trigger: AGCTGAGAAGGAAATAGCGCATTTCTTCCCTCCCCA...AAAAATGACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR GCA 90 bp | TTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTATGAGGCTTGATCAATaGAAGTGTGCTCTGGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LLLPCIARQVFISMCVFLMRLDQ*KCALGR Trigger: CCTCCCCAGAGCACACTTGCATTGATCAAGCCTCAT...AAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR GCA 90 bp | TCACAGTTTTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTTGCTCTGGAGTCAGGTaGATTTCCTTCATCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: SQFLLLPCIARQVFISMCCSGVR*ISFIRV Trigger: GACCCTGATGAAGGAAATGCACCTGACTCCAGAGCA...ACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAAAACTGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR CCA 90 bp | ATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTCATTTTCAGTTTTGCTTCTTCTaGGTCTACTGGGCCAACCAT | + |
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Preference number: 4 (lower is better) Translates to: MHSQASFHLHVCFPWSHFQFCFF*VYWANH Trigger: ATGGTTGGCCCAGTAGACCCAGAAGAAGCAAAACTG...AAAATGACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR CCA 90 bp | ACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTCATAAGTTAGACGCCCCATaGACAGCATTTCTCAAAATG | + |
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Preference number: 4 (lower is better) Translates to: TMHSQASFHLHVCFPWSHKLDAP*TAFLKM Trigger: CATTTTGAGAAATGCTGTCCATGGGGCGTCTAACTT...ATGACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000091763.3 |
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| CDS-3UTR GCA 90 bp | ACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTCATACGATCCATTTCACCTaGTACAATTTTCCTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: TMHSQASFHLHVCFPWSHTIHFT*YNFPLF Trigger: GAAGAGAGGAAAATTGTAGCAGGTGAAATGGATCGT...ATGACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
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| CDS-3UTR GCA 90 bp | GTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTTCTGATAATACGATTTaGCTCTGCATCAGTATGGTG | + |
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Preference number: 4 (lower is better) Translates to: VTMHSQASFHLHVCFPWSSDNTI*LCISMV Trigger: CACCATACTGATGCAGAGGCAAATCGTATTATCAGA...ACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR GCA 90 bp | CAGTTTTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTGGGGAGGGAAGAAATaGGCTATTTCCTTCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: QFLLLPCIARQVFISMCVWGGKK*AISFSA Trigger: AGCTGAGAAGGAAATAGCGCATTTCTTCCCTCCCCA...AACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAAAACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR GCA 90 bp | TTCTTCATTACCTCCTTGAGCTTCTGTGAATCTAGTATTTGTGCTAGTTCTCAGTGGGGAGGGAAGAAATaGGCTATTTCCTTCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: FFITSLSFCESSICASSQWGGKK*AISFSA Trigger: AGCTGAGAAGGAAATAGCGCATTTCTTCCCTCCCCA...CTGAGAACTAGCACAAATACTAGATTCACAGAAGCTCAAGGAGGTAATGAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223466.2 |
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| CDS-3UTR GCA 90 bp | ATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTCATTTTGGTCAGCTCAAATCCTaGCTCTTTAATGGTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: MHSQASFHLHVCFPWSHFGQLKS*LFNGLQ Trigger: CTGAAGACCATTAAAGAGGCAGGATTTGAGCTGACC...AAAATGACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR TCA 90 bp | CAGTTTTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTCAGCAACGACGAAGTaGAGAATCTCATCTTCGTTC | + |
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Preference number: 4 (lower is better) Translates to: QFLLLPCIARQVFISMCVSATTK*RISSSF Trigger: GAACGAAGATGAGATTCTTCACTTCGTCGTTGCTGA...AACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAAAACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
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| CDS-3UTR TCA 90 bp | TTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTCAGCAACGACGAAGTaGAGAATCTCATCTTCGTTC | + |
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Preference number: 4 (lower is better) Translates to: FIVTMHSQASFHLHVCFPSATTK*RISSSF Trigger: GAACGAAGATGAGATTCTTCACTTCGTCGTTGCTGA...AGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
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| CDS-3UTR GCA 90 bp | TCACAGTTTTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTCTTTATCATCACAGGTaGAAACCTAACGTGAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SQFLLLPCIARQVFISMCLYHHR*KPNVRL Trigger: GAGCCTCACGTTAGGTTTGCACCTGTGATGATAAAG...ACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAAAACTGTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR GCA 90 bp | GGGTCACAGTTTTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGCGTTTTCATGGATCTTaGACACTGTTCTTGCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: GSQFLLLPCIARQVFISMRFHGS*TLFLLL Trigger: AAGAAGCAAGAACAGTGTGCAAGATCCATGAAAACG...CATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAAAACTGTGACCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR GCA 90 bp | CAGTTTTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTGGTCAGCTCAAATCCTaGCTCTTTAATGGTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: QFLLLPCIARQVFISMCVGQLKS*LFNGLQ Trigger: CTGAAGACCATTAAAGAGGCAGGATTTGAGCTGACC...AACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAAAACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR CCA 90 bp | ACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTCATTTATCTCTAAATGGCTaGAGAGTCACAATGTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: TMHSQASFHLHVCFPWSHLSLNG*RVTMLS Trigger: TGACAACATTGTGACTCTCCAGCCATTTAGAGATAA...ATGACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
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| CDS-3UTR CCA 90 bp | GATGAAAACTTCTTCATTACCTCCTTGAGCTTCTGTGAATCTAGTATTTGTGCTCAGTTTTGCTTCTTCTaGGTCTACTGGGCCAACCAT | + |
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Preference number: 4 (lower is better) Translates to: DENFFITSLSFCESSICAQFCFF*VYWANH Trigger: ATGGTTGGCCCAGTAGACCCAGAAGAAGCAAAACTG...AGCACAAATACTAGATTCACAGAAGCTCAAGGAGGTAATGAAGAAGTTTTCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223466.2 |
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| CDS-3UTR GCA 90 bp | ATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTCATTTTACGATCCATTTCACCTaGTACAATTTTCCTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: MHSQASFHLHVCFPWSHFTIHFT*YNFPLF Trigger: GAAGAGAGGAAAATTGTAGCAGGTGAAATGGATCGT...AAAATGACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
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| CDS-3UTR GCA 90 bp | GTCACAGTTTTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTCTGATAATACGATTTaGCTCTGCATCAGTATGGTG | + |
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Preference number: 4 (lower is better) Translates to: VTVFIVTMHSQASFHLHVSDNTI*LCISMV Trigger: CACCATACTGATGCAGAGGCAAATCGTATTATCAGA...CACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAAAACTGTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR CCA 90 bp | CAGTTTTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTTGTTTGCATGCTCTaGAGTCAGGTGCATTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: QFLLLPCIARQVFISMCVFVCML*SQVHFL Trigger: AAGGAAATGCACCTGACTCCAGAGCATGCAAACAAA...AACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAAAACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR CCA 90 bp | TTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTTTGTTTGCATGCTCTaGAGTCAGGTGCATTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: FIVTMHSQASFHLHVCFPFVCML*SQVHFL Trigger: AAGGAAATGCACCTGACTCCAGAGCATGCAAACAAA...AGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR GCA 90 bp | TTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTCTGATAATACGATTTaGCTCTGCATCAGTATGGTG | + |
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Preference number: 4 (lower is better) Translates to: FIVTMHSQASFHLHVCFPSDNTI*LCISMV Trigger: CACCATACTGATGCAGAGGCAAATCGTATTATCAGA...AGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR GCA 90 bp | GATGAAAACTTCTTCATTACCTCCTTGAGCTTCTGTGAATCTAGTATTTGTGCTCGTTTTCATGGATCTTaGACACTGTTCTTGCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: DENFFITSLSFCESSICARFHGS*TLFLLL Trigger: AAGAAGCAAGAACAGTGTGCAAGATCCATGAAAACG...AGCACAAATACTAGATTCACAGAAGCTCAAGGAGGTAATGAAGAAGTTTTCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223466.2 |
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| CDS-3UTR CCA 90 bp | TCACAGTTTTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTTTATCTCTAAATGGCTaGAGAGTCACAATGTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: SQFLLLPCIARQVFISMCLSLNG*RVTMLS Trigger: TGACAACATTGTGACTCTCCAGCCATTTAGAGATAA...ACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAAAACTGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
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| CDS-3UTR CCA 90 bp | TCACAGTTTTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTTTTTCTATTGATAAGTaGAGCATTTGCACCCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SQFLLLPCIARQVFISMCFSIDK*SICTLN Trigger: ATTCAGGGTGCAAATGCTCCACTTATCAATAGAAAA...ACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAAAACTGTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
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| CDS-3UTR CCA 90 bp | TTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTTTTCTATTGATAAGTaGAGCATTTGCACCCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FIVTMHSQASFHLHVCFPFSIDK*SICTLN Trigger: ATTCAGGGTGCAAATGCTCCACTTATCAATAGAAAA...AGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
||
| CDS CCA 90 bp | TCGGAGGGATTCTGGGGAGAGCAGTTTTGCTTCTTCTGGGTCTACTaGGCCAACCATTCGCCTCCATTCTGCAACAGCATTCCACTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SEGFWGEQFCFFWVY*ANHSPPFCNSIPLG Trigger: ACCAAGTGGAATGCTGTTGCAGAATGGAGGCGAATGGTTGGCCCAGTAGACCCAGAAGAAGCAAAACTGCTCTCCCCAGAATCCCTCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091763.3 |
||
| CDS CCA 90 bp | ATATTTGGCTCGGAGGGATTCTGGGGAGAGCAGTTTTGCTTCTTCTaGGTCTACTGGGCCAACCATTCGCCTCCATTCTGCAACAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: IFGSEGFWGEQFCFF*VYWANHSPPFCNSI Trigger: AATGCTGTTGCAGAATGGAGGCGAATGGTTGGCCCAGTAGACCCAGAAGAAGCAAAACTGCTCTCCCCAGAATCCCTCCGAGCCAAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091763.3 |
||
| CDS CCA 90 bp | TCGGAGGGATTCTGGGGAGAGCAGTTTTGCTTCTTCTGGGTCTACTaGGCCAACCATTCGCCTCCATTAAAGATAAGACTTCCAATACAT | + |
|
Preference number: 5 (lower is better) Translates to: SEGFWGEQFCFFWVY*ANHSPPLKIRLPIH Trigger: ATGTATTGGAAGTCTTATCTTTAATGGAGGCGAATGGTTGGCCCAGTAGACCCAGAAGAAGCAAAACTGCTCTCCCCAGAATCCCTCCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223466.2 |
||
| CDS CCA 90 bp | ATATTTGGCTCGGAGGGATTCTGGGGAGAGCAGTTTTGCTTCTTCTaGGTCTACTGGGCCAACCATTCGCCTCCATTAAAGATAAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: IFGSEGFWGEQFCFF*VYWANHSPPLKIRL Trigger: AAGTCTTATCTTTAATGGAGGCGAATGGTTGGCCCAGTAGACCCAGAAGAAGCAAAACTGCTCTCCCCAGAATCCCTCCGAGCCAAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223466.2 |
||
| CDS-3UTR CAA 90 bp | CCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTCATTAAACTTTGCACGGCTTaGCAAGGTCCACACCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PCIARQVFISMCVFLGVIKLCTA*QGPHQA Trigger: AGCCTGGTGTGGACCTTGCAAAGCCGTGCAAAGTTT...AATGACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
||
| CDS-3UTR CAA 90 bp | CCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTCATTTCTCAGCTGCTGCTTTaGAACTGCTCCCGTAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: PCIARQVFISMCVFLGVISQLLL*NCSRRT Trigger: AGTTCTACGGGAGCAGTTCAAAAGCAGCAGCTGAGA...AATGACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
||
| CDS-3UTR CAA 90 bp | GTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTTCTCAGCTGCTGCTTTaGAACTGCTCCCGTAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: VTMHSQASFHLHVCFPWSSQLLL*NCSRRT Trigger: AGTTCTACGGGAGCAGTTCAAAAGCAGCAGCTGAGA...ACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
||
| CDS-3UTR CAA 90 bp | GGGTCACAGTTTTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGCTGGGGAGAGCAGTTTaGCTTCTTCTGGGTCTACTG | + |
|
Preference number: 5 (lower is better) Translates to: GSQFLLLPCIARQVFISMLGRAV*LLLGLL Trigger: CAGTAGACCCAGAAGAAGCAAAACTGCTCTCCCCAG...CATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAAAACTGTGACCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS GCA 90 bp | GCTTCTGTGAATTCTTTCTTTGTGTGTCACATGAGGCTTGATCAATaGAAGTGTGCTCTGGGGAGGGAAGAAATGCGCTATTTCCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ASVNSFFVCHMRLDQ*KCALGREEMRYFLL Trigger: GAGAAGGAAATAGCGCATTTCTTCCCTCCCCAGAGCACACTTGCATTGATCAAGCCTCATGTGACACACAAAGAAAGAATTCACAGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039340.15 |
||
| CDS GCA 90 bp | CTCTGGAGTCAGGTGCATTTCCTTCATCAGGGTCAGCTCAAATCCTaGCTCTTTAATGGTCTTCAGGATCTCCATTCTTTCTTTGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LWSQVHFLHQGQLKS*LFNGLQDLHSFFVC Trigger: ACACACAAAGAAAGAATGGAGATCCTGAAGACCATTAAAGAGGCAGGATTTGAGCTGACCCTGATGAAGGAAATGCACCTGACTCCAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091763.3 ENSMUST00000223466.2 |
||
| CDS-3UTR CAA 90 bp | GGGTCACAGTTTTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTCTCAGCTGCTGCTTTaGAACTGCTCCCGTAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: GSQFLLLPCIARQVFISMSQLLL*NCSRRT Trigger: AGTTCTACGGGAGCAGTTCAAAAGCAGCAGCTGAGA...CATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAAAACTGTGACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
||
| CDS-3UTR CAA 90 bp | ACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTCATGCAACAGCATTCCACTaGGTCAAAACCATGACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: TMHSQASFHLHVCFPWSHATAFH*VKTMTS Trigger: GCTAGTCATGGTTTTGACCAAGTGGAATGCTGTTGC...ATGACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000091763.3 |
||
| CDS TCA 90 bp | TCCTTGAGCTTCTGTGAATTCTTTCTTTGTGTGTCACATGAGGCTTaGTCAATGCAAGTGTGCTCTGGGGAGGGAAGAAATGCGCTATTT | + |
|
Preference number: 5 (lower is better) Translates to: SLSFCEFFLCVSHEA*SMQVCSGEGRNALF Trigger: AAATAGCGCATTTCTTCCCTCCCCAGAGCACACTTGCATTGATCAAGCCTCATGTGACACACAAAGAAAGAATTCACAGAAGCTCAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039340.15 |
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| CDS-3UTR CAA 90 bp | GGGTCACAGTTTTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGAGGTCCACACCAGGCTaGGTAAACATCAATCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: GSQFLLLPCIARQVFISMRSTPG*VNINHC Trigger: ACAGTGATTGATGTTTACCAAGCCTGGTGTGGACCT...CATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAAAACTGTGACCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
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| CDS-3UTR CAA 90 bp | GTCACAGTTTTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGGAGAGTCACAATGTaGTCAGCTTCAGCAACGACG | + |
|
Preference number: 5 (lower is better) Translates to: VTVFIVTMHSQASFHLHVWRVTM*SASATT Trigger: CGTCGTTGCTGAAGCTGACAACATTGTGACTCTCCA...CACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAAAACTGTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
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| CDS TCA 90 bp | ATCACTGTTAAGCCTTTGTTCAGCAACATCTCATCCCACAAGTTCTaGCTATTGACGACTGACTGTAGCTGGACTTCACGCTTTTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ITVKPLFSNISSHKF*LLTTDCSWTSRFLL Trigger: AAGCAAAAAGCGTGAAGTCCAGCTACAGTCAGTCGTCAATAGTCAGAACTTGTGGGATGAGATGTTGCTGAACAAAGGCTTAACAGTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
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| CDS GCA 90 bp | GCCATTTGTCATAGAAACGACAAACTCTTCAAAGTCAGGCTGGTCTaGTATATGAGTGTAGAATTCCCTCACTACCTCTTCAGGGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: AICHRNDKLFKVRLV*YMSVEFPHYLFREN Trigger: ATTCTCCCTGAAGAGGTAGTGAGGGAATTCTACACTCATATAGCAGACCAGCCTGACTTTGAAGAGTTTGTCGTTTCTATGACAAATGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
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| CDS-3UTR CAA 90 bp | TTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGAGTCACAATGTaGTCAGCTTCAGCAACGACG | + |
|
Preference number: 5 (lower is better) Translates to: FIVTMHSQASFHLHVCFPWRVTM*SASATT Trigger: CGTCGTTGCTGAAGCTGACAACATTGTGACTCTCCA...AGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
||
| CDS-3UTR CAA 90 bp | ATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGTCGGTCCATATACTCTaGCAAACTGTCCCGTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: IVTMHSQASFHLHVCFPWSVHIL*QTVPFL Trigger: AAGAAACGGGACAGTTTGCAAGAGTATATGGACCGA...CCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR CAA 90 bp | GTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTTCGTTTTCATGGATCTaGCACACTGTTCTTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VTMHSQASFHLHVCFPWSSFSWI*HTVLAS Trigger: AGAAGCAAGAACAGTGTGCAAGATCCATGAAAACGA...ACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR CAA 90 bp | AACTTCTTCATTACCTCCTTGAGCTTCTGTGAATCTAGTATTTGTGCTAGTTCTCTGGGGAGAGCAGTTTaGCTTCTTCTGGGTCTACTG | + |
|
Preference number: 5 (lower is better) Translates to: NFFITSLSFCESSICASSLGRAV*LLLGLL Trigger: CAGTAGACCCAGAAGAAGCAAAACTGCTCTCCCCAG...AGAACTAGCACAAATACTAGATTCACAGAAGCTCAAGGAGGTAATGAAGAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223466.2 |
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| CDS TCA 90 bp | CCATTCGCCTCCATTCTGCAACAGCATTCCACTTGGTCAAAACCATaGCTAGCGACATGCCCAAAGATAAGACTTCCAATACATTTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: PFASILQQHSTWSKP*LATCPKIRLPIHFY Trigger: ATAAAAATGTATTGGAAGTCTTATCTTTGGGCATGTCGCTAGTCATGGTTTTGACCAAGTGGAATGCTGTTGCAGAATGGAGGCGAATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091763.3 |
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| CDS-3UTR CAA 90 bp | CAGTTTTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTAGGTCCACACCAGGCTaGGTAAACATCAATCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: QFLLLPCIARQVFISMCVRSTPG*VNINHC Trigger: ACAGTGATTGATGTTTACCAAGCCTGGTGTGGACCT...AACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAAAACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
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| CDS-3UTR CAA 90 bp | ATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTCATTTTTCGGTCCATATACTCTaGCAAACTGTCCCGTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: MHSQASFHLHVCFPWSHFSVHIL*QTVPFL Trigger: AAGAAACGGGACAGTTTGCAAGAGTATATGGACCGA...AAAATGACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR CAA 90 bp | CCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTCATTTCTTGCACACTGTTCTaGCTTCTTCCTCTGATAATA | + |
|
Preference number: 5 (lower is better) Translates to: PCIARQVFISMCVFLGVISCTLF*LLPLII Trigger: TATTATCAGAGGAAGAAGCAAGAACAGTGTGCAAGA...AATGACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR CAA 90 bp | ACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTCATTCTTGCACACTGTTCTaGCTTCTTCCTCTGATAATA | + |
|
Preference number: 5 (lower is better) Translates to: TMHSQASFHLHVCFPWSHSCTLF*LLPLII Trigger: TATTATCAGAGGAAGAAGCAAGAACAGTGTGCAAGA...ATGACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS TCA 90 bp | GATAATACGATTTGCCTCTGCATCAGTATGGTGAACCCTTCATTGTaGATAACGTTCAACACGTCATCTTTCTCTTCCTCACAGATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: DNTICLCISMVNPSL*ITFNTSSFSSSQMS Trigger: AGACATCTGTGAGGAAGAGAAAGATGACGTGTTGAACGTTATTCACAATGAAGGGTTCACCATACTGATGCAGAGGCAAATCGTATTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS GCA 90 bp | ATAACGTTCAACACGTCATCTTTCTCTTCCTCACAGATGTCTGGATaGAGTAATGCTAGCGTCGTTTGTACATTCGTGCTTTTCATAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ITFNTSSFSSSQMSG*SNASVVCTFVLFIV Trigger: AACTATGAAAAGCACGAATGTACAAACGACGCTAGCATTACTGCATCCAGACATCTGTGAGGAAGAGAAAGATGACGTGTTGAACGTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR CAA 90 bp | TTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTTCGGTCCATATACTCTaGCAAACTGTCCCGTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLLPCIARQVFISMCVFLSVHIL*QTVPFL Trigger: AAGAAACGGGACAGTTTGCAAGAGTATATGGACCGA...AAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR CAA 90 bp | ATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTGGAGTCATTTTTCGTTTTCATGGATCTaGCACACTGTTCTTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: MHSQASFHLHVCFPWSHFSFSWI*HTVLAS Trigger: AGAAGCAAGAACAGTGTGCAAGATCCATGAAAACGA...AAAATGACTCCAAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS-3UTR CAA 90 bp | TTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTATCACTGTTAAGCCTTaGTTCAGCAACATCTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LLLPCIARQVFISMCVFLITVKP*FSNISS Trigger: GGATGAGATGTTGCTGAACAAAGGCTTAACAGTGAT...AAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
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| CDS-3UTR CAA 90 bp | TCACAGTTTTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTATCACTGTTAAGCCTTaGTTCAGCAACATCTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SQFLLLPCIARQVFISMCITVKP*FSNISS Trigger: GGATGAGATGTTGCTGAACAAAGGCTTAACAGTGAT...ACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAAAACTGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
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| CDS-3UTR CAA 90 bp | TTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTTCCTTTCGTTTTCATGGATCTaGCACACTGTTCTTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLPCIARQVFISMCVFLSFSWI*HTVLAS Trigger: AGAAGCAAGAACAGTGTGCAAGATCCATGAAAACGA...AAGGAAAACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS TCA 90 bp | CCATATTCTTCATCGATTGCATCTACTAGTGGAATTTCAACATACTaGGGACGATCCATTTCACCTGCTACAATTTTCCTCTCTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: PYSSSIASTSGISTY*GRSISPATIFLSSS Trigger: AGATGAAGAGAGGAAAATTGTAGCAGGTGAAATGGATCGTCCTCAGTATGTTGAAATTCCACTAGTAGATGCAATCGATGAAGAATATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
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| CDS-3UTR CAA 90 bp | CAGTTTTTATTGTTACCATGCATAGCCAGGCAAGTTTTCATCTCCATGTGTGTTTCTTGCACACTGTTCTaGCTTCTTCCTCTGATAATA | + |
|
Preference number: 5 (lower is better) Translates to: QFLLLPCIARQVFISMCVSCTLF*LLPLII Trigger: TATTATCAGAGGAAGAAGCAAGAACAGTGTGCAAGA...AACACACATGGAGATGAAAACTTGCCTGGCTATGCATGGTAACAATAAAAACTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
||
| CDS CCA 72 bp | TCGGAGGGATTCTGGGGAGAGCAGTTTTGCTTCTTCTaGGTCTACTGGGCCAACCATTCGCCTCCATTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SEGFWGEQFCFF*VYWANHSPPFC Trigger: GCAGAATGGAGGCGAATGGTTGGCCCAGTAGACCCAGAAGAAGCAAAACTGCTCTCCCCAGAATCCCTCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091763.3 |
||
| CDS CCA 72 bp | TCGGAGGGATTCTGGGGAGAGCAGTTTTGCTTCTTCTaGGTCTACTGGGCCAACCATTCGCCTCCATTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SEGFWGEQFCFF*VYWANHSPPLK Trigger: CTTTAATGGAGGCGAATGGTTGGCCCAGTAGACCCAGAAGAAGCAAAACTGCTCTCCCCAGAATCCCTCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223466.2 |
||
| CDS CAA 90 bp | TGTCTAGTCCATATTTGGCTCGGAGGGATTCTGGGGAGAGCAGTTTaGCTTCTTCTGGGTCTACTGGGCCAACCATTCGCCTCCATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: CLVHIWLGGILGRAV*LLLGLLGQPFASIL Trigger: CAGAATGGAGGCGAATGGTTGGCCCAGTAGACCCAGAAGAAGCAAAACTGCTCTCCCCAGAATCCCTCCGAGCCAAATATGGACTAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091763.3 |
||
| CDS CCA 72 bp | TTCTGGGGAGAGCAGTTTTGCTTCTTCTGGGTCTACTaGGCCAACCATTCGCCTCCATTCTGCAACAGCATT | + |
|
Preference number: 6 (lower is better) Translates to: FWGEQFCFFWVY*ANHSPPFCNSI Trigger: AATGCTGTTGCAGAATGGAGGCGAATGGTTGGCCCAGTAGACCCAGAAGAAGCAAAACTGCTCTCCCCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091763.3 |
||
| CDS CAA 90 bp | TGTCTAGTCCATATTTGGCTCGGAGGGATTCTGGGGAGAGCAGTTTaGCTTCTTCTGGGTCTACTGGGCCAACCATTCGCCTCCATTAAA | + |
|
Preference number: 6 (lower is better) Translates to: CLVHIWLGGILGRAV*LLLGLLGQPFASIK Trigger: TTTAATGGAGGCGAATGGTTGGCCCAGTAGACCCAGAAGAAGCAAAACTGCTCTCCCCAGAATCCCTCCGAGCCAAATATGGACTAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223466.2 |
||
| CDS CAA 90 bp | TCTACTGGGCCAACCATTCGCCTCCATTCTGCAACAGCATTCCACTaGGTCAAAACCATGACTAGCGACATGCCCAAAGATAAGACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: STGPTIRLHSATAFH*VKTMTSDMPKDKTS Trigger: GGAAGTCTTATCTTTGGGCATGTCGCTAGTCATGGTTTTGACCAAGTGGAATGCTGTTGCAGAATGGAGGCGAATGGTTGGCCCAGTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091763.3 |
||
| CDS TCA 72 bp | GTCTTCAGGATCTCCATTCTTTCTTTGTGTGTCACATaGGGCTTGATCAATGCAAGTGTGCTCTGGGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: VFRISILSLCVT*GLINASVLWGG Trigger: CCCTCCCCAGAGCACACTTGCATTGATCAAGCCTCATGTGACACACAAAGAAAGAATGGAGATCCTGAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS CAA 72 bp | CCAACCATTCGCCTCCATTCTGCAACAGCATTCCACTaGGTCAAAACCATGACTAGCGACATGCCCAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: PTIRLHSATAFH*VKTMTSDMPKD Trigger: ATCTTTGGGCATGTCGCTAGTCATGGTTTTGACCAAGTGGAATGCTGTTGCAGAATGGAGGCGAATGGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091763.3 |
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| CDS TCA 72 bp | AAGCCTTTGTTCAGCAACATCTCATCCCACAAGTTCTaGCTATTGACGACTGACTGTAGCTGGACTTCACGC | + |
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Preference number: 6 (lower is better) Translates to: KPLFSNISSHKF*LLTTDCSWTSR Trigger: GCGTGAAGTCCAGCTACAGTCAGTCGTCAATAGTCAGAACTTGTGGGATGAGATGTTGCTGAACAAAGGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
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| CDS GCA 72 bp | TTGCAAACTGTCCCGTTTCTTCTTTATCATCACAGGTaGAAACCTAACGTGAGGCTCTTCCAAAACGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LQTVPFLLYHHR*KPNVRLFQNAR Trigger: CCTGGCGTTTTGGAAGAGCCTCACGTTAGGTTTGCACCTGTGATGATAAAGAAGAAACGGGACAGTTTGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS GCA 72 bp | TTGATCAATGCAAGTGTGCTCTGGGGAGGGAAGAAATaGGCTATTTCCTTCTCAGCTGCTGCTTTTGAACTG | + |
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Preference number: 6 (lower is better) Translates to: LINASVLWGGKK*AISFSAAAFEL Trigger: CAGTTCAAAAGCAGCAGCTGAGAAGGAAATAGCGCATTTCTTCCCTCCCCAGAGCACACTTGCATTGATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS CCA 72 bp | TTCTGGGGAGAGCAGTTTTGCTTCTTCTGGGTCTACTaGGCCAACCATTCGCCTCCATTAAAGATAAGACTT | + |
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Preference number: 6 (lower is better) Translates to: FWGEQFCFFWVY*ANHSPPLKIRL Trigger: AAGTCTTATCTTTAATGGAGGCGAATGGTTGGCCCAGTAGACCCAGAAGAAGCAAAACTGCTCTCCCCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223466.2 |
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| CDS CAA 72 bp | CGGGAGAGTTTCTTCCTGAATAACCTCGGAGTCTTCTaGAGATACAATGAGCACACAGCTGAGGCCATTTGT | + |
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Preference number: 6 (lower is better) Translates to: RESFFLNNLGVF*RYNEHTAEAIC Trigger: ACAAATGGCCTCAGCTGTGTGCTCATTGTATCTCAAGAAGACTCCGAGGTTATTCAGGAAGAAACTCTCCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
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| CDS TCA 72 bp | TGTTCAGCAACATCTCATCCCACAAGTTCTGACTATTaGCGACTGACTGTAGCTGGACTTCACGCTTTTTGC | + |
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Preference number: 6 (lower is better) Translates to: CSATSHPTSSDY*RLTVAGLHAFC Trigger: GCAAAAAGCGTGAAGTCCAGCTACAGTCAGTCGTCAATAGTCAGAACTTGTGGGATGAGATGTTGCTGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
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| CDS GCA 72 bp | CATTCTTTCTTTGTGTGTCACATGAGGCTTGATCAATaGAAGTGTGCTCTGGGGAGGGAAGAAATGCGCTAT | + |
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Preference number: 6 (lower is better) Translates to: HSFFVCHMRLDQ*KCALGREEMRY Trigger: ATAGCGCATTTCTTCCCTCCCCAGAGCACACTTGCATTGATCAAGCCTCATGTGACACACAAAGAAAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS CCA 72 bp | AAGAGAAACACGGGCTCACATTTATCTCTAAATGGCTaGAGAGTCACAATGTTGTCAGCTTCAGCAACGACG | + |
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Preference number: 6 (lower is better) Translates to: KRNTGSHLSLNG*RVTMLSASATT Trigger: CGTCGTTGCTGAAGCTGACAACATTGTGACTCTCCAGCCATTTAGAGATAAATGTGAGCCCGTGTTTCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
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| CDS CAA 90 bp | CTCGACATCGCAGTAATCAGACATATGCTGTCGGTCCATATACTCTaGCAAACTGTCCCGTTTCTTCTTTATCATCACAGGTGCAAACCT | + |
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Preference number: 6 (lower is better) Translates to: LDIAVIRHMLSVHIL*QTVPFLLYHHRCKP Trigger: AGGTTTGCACCTGTGATGATAAAGAAGAAACGGGACAGTTTGCAAGAGTATATGGACCGACAGCATATGTCTGATTACTGCGATGTCGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS TCA 72 bp | CGTTTCTTCTTTATCATCACAGGTGCAAACCTAACGTaGGGCTCTTCCAAAACGCCAGGTTCTTCTTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: RFFFIITGANLT*GSSKTPGSSSV Trigger: TACAGAAGAAGAACCTGGCGTTTTGGAAGAGCCTCACGTTAGGTTTGCACCTGTGATGATAAAGAAGAAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS TCA 72 bp | GAAGAAATGCGCTATTTCCTTCTCAGCTGCTGCTTTTaGACTGCTCCCGTAGAACTGGTTGGTAGGAAAATT | + |
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Preference number: 6 (lower is better) Translates to: EEMRYFLLSCCF*TAPVELVGRKI Trigger: AATTTTCCTACCAACCAGTTCTACGGGAGCAGTTCAAAAGCAGCAGCTGAGAAGGAAATAGCGCATTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS GCA 72 bp | AACACGTCATCTTTCTCTTCCTCACAGATGTCTGGATaGAGTAATGCTAGCGTCGTTTGTACATTCGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: NTSSFSSSQMSG*SNASVVCTFVL Trigger: AAGCACGAATGTACAAACGACGCTAGCATTACTGCATCCAGACATCTGTGAGGAAGAGAAAGATGACGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS GCA 72 bp | AATTCTTTCTTTGTGTGTCACATGAGGCTTGATCAATaGAAGTGTGCTCTGGGGAGGGAAGAAATGCGCTAT | + |
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Preference number: 6 (lower is better) Translates to: NSFFVCHMRLDQ*KCALGREEMRY Trigger: ATAGCGCATTTCTTCCCTCCCCAGAGCACACTTGCATTGATCAAGCCTCATGTGACACACAAAGAAAGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039340.15 |
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| CDS TCA 72 bp | TTCTGTGAATTCTTTCTTTGTGTGTCACATGAGGCTTaGTCAATGCAAGTGTGCTCTGGGGAGGGAAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: FCEFFLCVSHEA*SMQVCSGEGRN Trigger: ATTTCTTCCCTCCCCAGAGCACACTTGCATTGATCAAGCCTCATGTGACACACAAAGAAAGAATTCACAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039340.15 |
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| CDS TCA 72 bp | TCCATTCTGCAACAGCATTCCACTTGGTCAAAACCATaGCTAGCGACATGCCCAAAGATAAGACTTCCAATA | + |
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Preference number: 6 (lower is better) Translates to: SILQQHSTWSKP*LATCPKIRLPI Trigger: TATTGGAAGTCTTATCTTTGGGCATGTCGCTAGTCATGGTTTTGACCAAGTGGAATGCTGTTGCAGAATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091763.3 |
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| CDS TCA 72 bp | AGGATTACCCTCTGTGAACACATTACTAATGATTTCTaGTGCTTCAGAAAAGTTAGACGCCCCATGGACAGC | + |
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Preference number: 6 (lower is better) Translates to: RITLCEHITNDF*CFRKVRRPMDS Trigger: GCTGTCCATGGGGCGTCTAACTTTTCTGAAGCATCAGAAATCATTAGTAATGTGTTCACAGAGGGTAATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091763.3 |
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| CDS CAA 72 bp | GCAGTAATCAGACATATGCTGTCGGTCCATATACTCTaGCAAACTGTCCCGTTTCTTCTTTATCATCACAGG | + |
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Preference number: 6 (lower is better) Translates to: AVIRHMLSVHIL*QTVPFLLYHHR Trigger: CCTGTGATGATAAAGAAGAAACGGGACAGTTTGCAAGAGTATATGGACCGACAGCATATGTCTGATTACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS TCA 72 bp | TCATCGATTGCATCTACTAGTGGAATTTCAACATACTaGGGACGATCCATTTCACCTGCTACAATTTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SSIASTSGISTY*GRSISPATIFL Trigger: GAGGAAAATTGTAGCAGGTGAAATGGATCGTCCTCAGTATGTTGAAATTCCACTAGTAGATGCAATCGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
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| CDS CAA 72 bp | CACTTTCATACTGTACTTCCCCATATTCTTCATCGATaGCATCTACTAGTGGAATTTCAACATACTGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: HFHTVLPHILHR*HLLVEFQHTED Trigger: GTCCTCAGTATGTTGAAATTCCACTAGTAGATGCAATCGATGAAGAATATGGGGAAGTACAGTATGAAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 |
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| CDS CAA 90 bp | ATGTGCCCTATAAGATTATCAAAATACTCTTCGTTTTCATGGATCTaGCACACTGTTCTTGCTTCTTCCTCTGATAATACGATTTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: MCPIRLSKYSSFSWI*HTVLASSSDNTICL Trigger: GAGGCAAATCGTATTATCAGAGGAAGAAGCAAGAACAGTGTGCAAGATCCATGAAAACGAAGAGTATTTTGATAATCTTATAGGGCACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS CCA 72 bp | TGCCCTATAAGATTATCAAAATACTCTTCGTTTTCATaGATCTTGCACACTGTTCTTGCTTCTTCCTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: CPIRLSKYSSFS*ILHTVLASSSD Trigger: ATCAGAGGAAGAAGCAAGAACAGTGTGCAAGATCCATGAAAACGAAGAGTATTTTGATAATCTTATAGGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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| CDS CAA 72 bp | ATAAGATTATCAAAATACTCTTCGTTTTCATGGATCTaGCACACTGTTCTTGCTTCTTCCTCTGATAATACG | + |
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Preference number: 6 (lower is better) Translates to: IRLSKYSSFSWI*HTVLASSSDNT Trigger: CGTATTATCAGAGGAAGAAGCAAGAACAGTGTGCAAGATCCATGAAAACGAAGAGTATTTTGATAATCTTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039340.15 ENSMUST00000091763.3 ENSMUST00000223466.2 |
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