Pregenerated sensors for NME7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026575Ensembl transcript IDs: ENSMUST00000086028.6, ENSMUST00000191947.6, ENSMUST00000193683.6, ENSMUST00000193808.6
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCGCCATCTCTCCCCGTGTCCTCCAGTGTGTTCTGCAGCTGTGTCTaGGACTGGGATCTGCCTGTCACTGTGGCTAGTGATGGGCTGGGT | + |
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Preference number: 1 (lower is better) Translates to: SPSLPVSSSVFCSCV*DWDLPVTVASDGLG Trigger: ACCCAGCCCATCACTAGCCACAGTGACAGGCAGATCCCAGTCTCAGACACAGCTGCAGAACACACTGGAGGACACGGGGAGAGATGGCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193808.6 |
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| 3UTR-3UTR GCA 90 bp | TCACTGTGGCTAGTGATGGGCTGGGTAGTTTGCTTATTCGTCCATTTCCTTTCCTCTCTGGAGGCATCATaGGCTGGTGCTGCGTCCTTA | + |
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Preference number: 2 (lower is better) Translates to: SLWLVMGWVVCLFVHFLSSLEAS*AGAASL Trigger: TAAGGACGCAGCACCAGCGCATGATGCCTCCAGAGA...GGAAAGGAAATGGACGAATAAGCAAACTACCCAGCCCATCACTAGCCACAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193808.6 |
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| 3UTR CCA 72 bp | ACTGGGATCTGCCTGTCACTGTGGCTAGTGATGGGCTaGGTAGTTTGCTTATTCGTCCATTTCCTTTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: TGICLSLWLVMG*VVCLFVHFLSF Trigger: GAAGGAAAGGAAATGGACGAATAAGCAAACTACCCAGCCCATCACTAGCCACAGTGACAGGCAGATCCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193808.6 |
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| 3UTR CCA 72 bp | AATGAACACATTCCTCACGTGTGTGACTCGATTGTCTaGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: NEHIPHVCDSIV*ASQSVSSLLWR Trigger: TCTCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACACGTGAGGAATGTGTTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR GCA 90 bp | ATGCTGTCTCGCCATCTCTCCCCGTGTCCTCCAGTGTGTTCTGCAGCTGTGTCTTTCTCTGGCAGCAGATaGAAAAGTATCAGGGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: MLSRHLSPCPPVCSAAVSFSGSR*KSIRAV Trigger: CACGGCCCTGATACTTTTGCATCTGCTGCCAGAGAA...AGACACAGCTGCAGAACACACTGGAGGACACGGGGAGAGATGGCGAGACAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193808.6 |
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| CDS-3UTR GCA 90 bp | GTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGAGATTTTCTCTTTCCTGCTaGCCAGCTGGCGGGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VCDSIVWASQSVSSLLWRFSLSC*PAGGLC Trigger: ACACAGCCCGCCAGCTGGGCAGCAGGAAAGAGAAAA...TCTCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR GCA 90 bp | ACGTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGAAAGTTTTCTCTTTCCTaGTGCCCAGCTGGCGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: TCVTRLSGRLSLCRLYSGKFSLS*CPAGGL Trigger: CAGCCCGCCAGCTGGGCAGCAGGAAAGAGAAAACTT...TCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR TCA 90 bp | ACGTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGAAAAGTATCAGGGCCGTaGGCTGCATTTCTCACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TCVTRLSGRLSLCRLYSGKVSGP*AAFLTP Trigger: TGGCGTGAGAAATGCAGCTCACGGCCCTGATACTTT...TCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR TCA 90 bp | GTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGAGAAAAGTATCAGGGCCGTaGGCTGCATTTCTCACGCCA | + |
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Preference number: 4 (lower is better) Translates to: VCDSIVWASQSVSSLLWRKVSGP*AAFLTP Trigger: TGGCGTGAGAAATGCAGCTCACGGCCCTGATACTTT...TCTCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR GCA 90 bp | ATGCTGTCTCGCCATCTCTCCCCGTGTCCTCCAGTGTGTTCTGCAGCTGTGTCTAGTTTTACCAAAAATTaGCCTGAGGGTCTCAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: MLSRHLSPCPPVCSAAVSSFTKN*PEGLRS Trigger: CGACCTGAGACCCTCAGGGCAATTTTTGGTAAAACT...AGACACAGCTGCAGAACACACTGGAGGACACGGGGAGAGATGGCGAGACAGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000193808.6 |
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| CDS-3UTR GCA 90 bp | GTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGAGATTCTCTGGCAGCAGATaGAAAAGTATCAGGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: VCDSIVWASQSVSSLLWRFSGSR*KSIRAV Trigger: CACGGCCCTGATACTTTTGCATCTGCTGCCAGAGAA...TCTCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR CCA 90 bp | GTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGAGAGCAGGTCCTCATACTTaGTCCGCTTTAAGAAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: VCDSIVWASQSVSSLLWRAGPHT*SALRRC Trigger: GCACCTTCTTAAAGCGGACCAAGTATGAGGACCTGC...TCTCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR TCA 90 bp | GTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGAGACATACCACTCTGCAATaGAAGCGAATCTCTCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: VCDSIVWASQSVSSLLWRHTTLQ*KRISRS Trigger: AGAGCGAGAGATTCGCTTTCATTGCAGAGTGGTATG...TCTCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR TCA 90 bp | ACGTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGAGATTTCTCCGGCCTTTaGCACTGCATCTGGTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: TCVTRLSGRLSLCRLYSGDFSGL*HCIWFD Trigger: ATCAAACCAGATGCAGTGTCAAAGGCCGGAGAAATC...TCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR GCA 90 bp | AGAATGAACACATTCCTCACGTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTTCTCTGGCAGCAGATaGAAAAGTATCAGGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RMNTFLTCVTRLSGRLSLFSGSR*KSIRAV Trigger: CACGGCCCTGATACTTTTGCATCTGCTGCCAGAGAA...CAGACTGAGACGCCCAGACAATCGAGTCACACACGTGAGGAATGTGTTCATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR CCA 90 bp | ACGTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGAATCTTGAAGAAATACTaGACCTCCAGGAGCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: TCVTRLSGRLSLCRLYSGILKKY*TSRSPS Trigger: GGATGGGCTCCTGGAGGTCCAGTATTTCTTCAAGAT...TCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR CCA 90 bp | GTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGAGAATCTTGAAGAAATACTaGACCTCCAGGAGCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VCDSIVWASQSVSSLLWRILKKY*TSRSPS Trigger: GGATGGGCTCCTGGAGGTCCAGTATTTCTTCAAGAT...TCTCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR TCA 90 bp | AGAATGAACACATTCCTCACGTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGGCGAATCTCTCGCTCTaGTTCTTGGGTGCCATATAT | + |
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Preference number: 4 (lower is better) Translates to: RMNTFLTCVTRLSGRLSLANLSL*FLGAIY Trigger: ATATATGGCACCCAAGAATCAGAGCGAGAGATTCGC...CAGACTGAGACGCCCAGACAATCGAGTCACACACGTGAGGAATGTGTTCATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR TCA 90 bp | AGAATGAACACATTCCTCACGTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGCATACCACTCTGCAATaGAAGCGAATCTCTCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: RMNTFLTCVTRLSGRLSLHTTLQ*KRISRS Trigger: AGAGCGAGAGATTCGCTTTCATTGCAGAGTGGTATG...CAGACTGAGACGCCCAGACAATCGAGTCACACACGTGAGGAATGTGTTCATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR TCA 90 bp | ACGTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGAATAGCGTCGGAGCAATaGAGCATTTGGATCATACCA | + |
|
Preference number: 4 (lower is better) Translates to: TCVTRLSGRLSLCRLYSGIASEQ*SIWIIP Trigger: TGGTATGATCCAAATGCTTCATTGCTCCGACGCTAT...TCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACACGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR GCA 90 bp | AATAAAAGAATGAACACATTCCTCACGTGTGTGACTCGATTGTCTGGGCGTCTCAAGTTTTCTCTTTCCTaGTGCCCAGCTGGCGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: NKRMNTFLTCVTRLSGRLKFSLS*CPAGGL Trigger: CAGCCCGCCAGCTGGGCAGCAGGAAAGAGAAAACTT...GAGACGCCCAGACAATCGAGTCACACACGTGAGGAATGTGTTCATTCTTTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR GCA 90 bp | GTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGAGAAGTTTTACCAAAAATTaGCCTGAGGGTCTCAGGTCG | + |
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Preference number: 4 (lower is better) Translates to: VCDSIVWASQSVSSLLWRSFTKN*PEGLRS Trigger: CGACCTGAGACCCTCAGGGCAATTTTTGGTAAAACT...TCTCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR GCA 90 bp | AGAATGAACACATTCCTCACGTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGCCTCCGGCAGATCCGTaGAATGAACAGCATTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: RMNTFLTCVTRLSGRLSLPPADP*NEQHFE Trigger: TTCAAAATGCTGTTCATTGCACGGATCTGCCGGAGG...CAGACTGAGACGCCCAGACAATCGAGTCACACACGTGAGGAATGTGTTCATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR CCA 90 bp | ACGTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGAATGGAGAAACCAAACTaGAACTTCTTCCCTGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: TCVTRLSGRLSLCRLYSGMEKPN*NFFPAD Trigger: GTCAGCAGGGAAGAAGTTCCAGTTTGGTTTCTCCAT...TCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACACGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR TCA 90 bp | ACGTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGAACACTGCATCTGGTTTaGTCAGGGCTAAAGTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: TCVTRLSGRLSLCRLYSGTLHLV*SGLKFS Trigger: AGAAAACTTTAGCCCTGATCAAACCAGATGCAGTGT...TCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACACGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR TCA 90 bp | GTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGAGAACACTGCATCTGGTTTaGTCAGGGCTAAAGTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: VCDSIVWASQSVSSLLWRTLHLV*SGLKFS Trigger: AGAAAACTTTAGCCCTGATCAAACCAGATGCAGTGT...TCTCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR TCA 90 bp | TTTCTCTGGAGGCATCATGCGCTGGTGCTGCGTCCTTATGAATGTTTTGACCATGATTTCTCCGGCCTTTaGCACTGCATCTGGTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: FLWRHHALVLRPYECFDHDFSGL*HCIWFD Trigger: ATCAAACCAGATGCAGTGTCAAAGGCCGGAGAAATC...ATGGTCAAAACATTCATAAGGACGCAGCACCAGCGCATGATGCCTCCAGAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193808.6 |
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| CDS-3UTR CCA 90 bp | ACGTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGATCTCGCTCTGATTCTTaGGTGCCATATATGGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: TCVTRLSGRLSLCRLYSGSRSDS*VPYMEK Trigger: TTTCTCCATATATGGCACCCAAGAATCAGAGCGAGA...TCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACACGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR TCA 90 bp | GTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGAGATGTTTATCATCTCAATaGTTTCTCCGGCCTTTGACA | + |
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Preference number: 4 (lower is better) Translates to: VCDSIVWASQSVSSLLWRCLSSQ*FLRPLT Trigger: TGTCAAAGGCCGGAGAAATCATTGAGATGATAAACA...TCTCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR TCA 90 bp | ACGTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGATGTTTATCATCTCAATaGTTTCTCCGGCCTTTGACA | + |
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Preference number: 4 (lower is better) Translates to: TCVTRLSGRLSLCRLYSGCLSSQ*FLRPLT Trigger: TGTCAAAGGCCGGAGAAATCATTGAGATGATAAACA...TCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACACGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR CCA 90 bp | TTTCTCTGGAGGCATCATGCGCTGGTGCTGCGTCCTTATGAATGTTTTGACCATATGGAGAAACCAAACTaGAACTTCTTCCCTGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: FLWRHHALVLRPYECFDHMEKPN*NFFPAD Trigger: GTCAGCAGGGAAGAAGTTCCAGTTTGGTTTCTCCAT...ATGGTCAAAACATTCATAAGGACGCAGCACCAGCGCATGATGCCTCCAGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193808.6 |
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| CDS-3UTR TCA 90 bp | AATAAAAGAATGAACACATTCCTCACGTGTGTGACTCGATTGTCTGGGCGTCTCGCGAATCTCTCGCTCTaGTTCTTGGGTGCCATATAT | + |
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Preference number: 4 (lower is better) Translates to: NKRMNTFLTCVTRLSGRLANLSL*FLGAIY Trigger: ATATATGGCACCCAAGAATCAGAGCGAGAGATTCGC...GAGACGCCCAGACAATCGAGTCACACACGTGAGGAATGTGTTCATTCTTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR GCA 90 bp | GTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGAGACGATTCTTTACATCATaGATTTCAACAGATCCGTCT | + |
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Preference number: 4 (lower is better) Translates to: VCDSIVWASQSVSSLLWRRFFTS*ISTDPS Trigger: AGACGGATCTGTTGAAATGCATGATGTAAAGAATCG...TCTCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR GCA 90 bp | AATAAAAGAATGAACACATTCCTCACGTGTGTGACTCGATTGTCTGGGCGTCTCCCTCCGGCAGATCCGTaGAATGAACAGCATTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: NKRMNTFLTCVTRLSGRLPPADP*NEQHFE Trigger: TTCAAAATGCTGTTCATTGCACGGATCTGCCGGAGG...GAGACGCCCAGACAATCGAGTCACACACGTGAGGAATGTGTTCATTCTTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR CCA 90 bp | GTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGAGAACAATTCCATTTCTCTaGCAGCAGATGCAAAAGTAT | + |
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Preference number: 4 (lower is better) Translates to: VCDSIVWASQSVSSLLWRTIPFL*QQMQKY Trigger: ATACTTTTGCATCTGCTGCCAGAGAAATGGAATTGT...TCTCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR CCA 90 bp | AATAAAAGAATGAACACATTCCTCACGTGTGTGACTCGATTGTCTGGGCGTCTCATCTTGAAGAAATACTaGACCTCCAGGAGCCCATCC | + |
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Preference number: 4 (lower is better) Translates to: NKRMNTFLTCVTRLSGRLILKKY*TSRSPS Trigger: GGATGGGCTCCTGGAGGTCCAGTATTTCTTCAAGAT...GAGACGCCCAGACAATCGAGTCACACACGTGAGGAATGTGTTCATTCTTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| 3UTR CAA 72 bp | AAAAGAATGAACACATTCCTCACGTGTGTGACTCGATaGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCT | + |
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Preference number: 4 (lower is better) Translates to: KRMNTFLTCVTR*SGRLSLCRLYS Trigger: AGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACACGTGAGGAATGTGTTCATTCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR TCA 90 bp | GTGGCTAGTGATGGGCTGGGTAGTTTGCTTATTCGTCCATTTCCTTTCCTTCTTACACTGCATCTGGTTTaGTCAGGGCTAAAGTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: VASDGLGSLLIRPFPFLLTLHLV*SGLKFS Trigger: AGAAAACTTTAGCCCTGATCAAACCAGATGCAGTGT...AAGAAGGAAAGGAAATGGACGAATAAGCAAACTACCCAGCCCATCACTAGCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193808.6 |
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| CDS-3UTR TCA 90 bp | TCACTGTGGCTAGTGATGGGCTGGGTAGTTTGCTTATTCGTCCATTTCCTTTCCTGTTTATCATCTCAATaGTTTCTCCGGCCTTTGACA | + |
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Preference number: 4 (lower is better) Translates to: SLWLVMGWVVCLFVHFLSCLSSQ*FLRPLT Trigger: TGTCAAAGGCCGGAGAAATCATTGAGATGATAAACA...GGAAAGGAAATGGACGAATAAGCAAACTACCCAGCCCATCACTAGCCACAGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193808.6 |
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| CDS-3UTR GCA 90 bp | AGAATGAACACATTCCTCACGTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGCGATTCTTTACATCATaGATTTCAACAGATCCGTCT | + |
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Preference number: 4 (lower is better) Translates to: RMNTFLTCVTRLSGRLSLRFFTS*ISTDPS Trigger: AGACGGATCTGTTGAAATGCATGATGTAAAGAATCG...CAGACTGAGACGCCCAGACAATCGAGTCACACACGTGAGGAATGTGTTCATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR GCA 90 bp | TTTCTCTGGAGGCATCATGCGCTGGTGCTGCGTCCTTATGAATGTTTTGACCATTCCGCTTTAAGAAGGTaGGACGATTCTTTACATCAT | + |
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Preference number: 4 (lower is better) Translates to: FLWRHHALVLRPYECFDHSALRR*DDSLHH Trigger: ATGATGTAAAGAATCGTCGCACCTTCTTAAAGCGGA...ATGGTCAAAACATTCATAAGGACGCAGCACCAGCGCATGATGCCTCCAGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193808.6 |
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| CDS-3UTR GCA 90 bp | AATAAAAGAATGAACACATTCCTCACGTGTGTGACTCGATTGTCTGGGCGTCTCAGTTTTACCAAAAATTaGCCTGAGGGTCTCAGGTCG | + |
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Preference number: 4 (lower is better) Translates to: NKRMNTFLTCVTRLSGRLSFTKN*PEGLRS Trigger: CGACCTGAGACCCTCAGGGCAATTTTTGGTAAAACT...GAGACGCCCAGACAATCGAGTCACACACGTGAGGAATGTGTTCATTCTTTTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS-3UTR CCA 90 bp | AATAAAAGAATGAACACATTCCTCACGTGTGTGACTCGATTGTCTGGGCGTCTCTCTCGCTCTGATTCTTaGGTGCCATATATGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NKRMNTFLTCVTRLSGRLSRSDS*VPYMEK Trigger: TTTCTCCATATATGGCACCCAAGAATCAGAGCGAGA...GAGACGCCCAGACAATCGAGTCACACACGTGAGGAATGTGTTCATTCTTTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS-3UTR GCA 90 bp | AATAAAAGAATGAACACATTCCTCACGTGTGTGACTCGATTGTCTGGGCGTCTCTCCGCTTTAAGAAGGTaGGACGATTCTTTACATCAT | + |
|
Preference number: 4 (lower is better) Translates to: NKRMNTFLTCVTRLSGRLSALRR*DDSLHH Trigger: ATGATGTAAAGAATCGTCGCACCTTCTTAAAGCGGA...GAGACGCCCAGACAATCGAGTCACACACGTGAGGAATGTGTTCATTCTTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS-3UTR CCA 90 bp | AATAAAAGAATGAACACATTCCTCACGTGTGTGACTCGATTGTCTGGGCGTCTCACAATTCCATTTCTCTaGCAGCAGATGCAAAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NKRMNTFLTCVTRLSGRLTIPFL*QQMQKY Trigger: ATACTTTTGCATCTGCTGCCAGAGAAATGGAATTGT...GAGACGCCCAGACAATCGAGTCACACACGTGAGGAATGTGTTCATTCTTTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS GCA 90 bp | CGTGAGCTGCATTTCTCACGCCATCTGTCCCAAAGAGGGCTCGGATaGTTCCGGGGGCATCTGTCCGTGATAGCCCAGAGTTTGCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RELHFSRHLSQRGLG*FRGHLSVIAQSLRV Trigger: GACCCGCAAACTCTGGGCTATCACGGACAGATGCCCCCGGAAGCATCCGAGCCCTCTTTGGGACAGATGGCGTGAGAAATGCAGCTCACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086028.6 ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS GCA 90 bp | TTCCATTTCTCTGGCAGCAGATGCAAAAGTATCAGGGCCGTGAGCTaGATTTCTCACGCCATCTGTCCCAAAGAGGGCTCGGATGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FHFSGSRCKSIRAVS*ISHAICPKEGSDAS Trigger: GGAAGCATCCGAGCCCTCTTTGGGACAGATGGCGTGAGAAATGCAGCTCACGGCCCTGATACTTTTGCATCTGCTGCCAGAGAAATGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086028.6 ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS CCA 90 bp | GCAGGTCCGCAGAATTCTCGAAATGTCTTTGTAGGGTTGCTCTGTTaGATCTCTATTGCTACGCAAGGGCCGGAGCACAGCTCTGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: AGPQNSRNVFVGLLC*ISIATQGPEHSSVT Trigger: GGTGACAGAGCTGTGCTCCGGCCCTTGCGTAGCAATAGAGATCCAACAGAGCAACCCTACAAAGACATTTCGAGAATTCTGCGGACCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGAGACCGCTGCTTCTTTCCTaGTCAGAGTCATCATTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: VCDSIVWASQSVSSLLWRPLLLS*SESSFG Trigger: TCCGAATGATGACTCTGACAAGGAAAGAAGCAGCGG...TCTCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS-3UTR CAA 90 bp | ACGTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGACCGCTGCTTCTTTCCTaGTCAGAGTCATCATTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: TCVTRLSGRLSLCRLYSGPLLLS*SESSFG Trigger: TCCGAATGATGACTCTGACAAGGAAAGAAGCAGCGG...TCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTGGAGGCATCATGCGCTGGTGCTGCGTCCTTATGAATGTTTTGACCATCGCAGGTCCTCATACTaGGTCCGCTTTAAGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FLWRHHALVLRPYECFDHRRSSY*VRFKKV Trigger: CACCTTCTTAAAGCGGACCAAGTATGAGGACCTGCG...ATGGTCAAAACATTCATAAGGACGCAGCACCAGCGCATGATGCCTCCAGAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193808.6 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGAGATGTAGGGTTGCTCTGTaGGATCTCTATTGCTACGCA | + |
|
Preference number: 5 (lower is better) Translates to: VCDSIVWASQSVSSLLWRCRVAL*DLYCYA Trigger: TGCGTAGCAATAGAGATCCAACAGAGCAACCCTACA...TCTCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS GCA 90 bp | GATCTTCCAGGCGCAGGTCCTCATACTTGGTCCGCTTTAAGAAGGTaGGACGATTCTTTACATCATGCATTTCAACAGATCCGTCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: DLPGAGPHTWSALRR*DDSLHHAFQQIRLW Trigger: CCACAGACGGATCTGTTGAAATGCATGATGTAAAGAATCGTCGCACCTTCTTAAAGCGGACCAAGTATGAGGACCTGCGCCTGGAAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086028.6 ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS-3UTR CAA 90 bp | ACGTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGAGGAGCAATGAAGCATTaGGATCATACCACTCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TCVTRLSGRLSLCRLYSGGAMKH*DHTTLQ Trigger: TTGCAGAGTGGTATGATCCAAATGCTTCATTGCTCC...TCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACACGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGAGAGACACTGCATCTGGTTaGATCAGGGCTAAAGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VCDSIVWASQSVSSLLWRDTASG*IRAKVF Trigger: GAAAACTTTAGCCCTGATCAAACCAGATGCAGTGTC...TCTCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS-3UTR CAA 90 bp | TCACTGTGGCTAGTGATGGGCTGGGTAGTTTGCTTATTCGTCCATTTCCTTTCCCCGCTGCTTCTTTCCTaGTCAGAGTCATCATTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLWLVMGWVVCLFVHFLSPLLLS*SESSFG Trigger: TCCGAATGATGACTCTGACAAGGAAAGAAGCAGCGG...GGAAAGGAAATGGACGAATAAGCAAACTACCCAGCCCATCACTAGCCACAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193808.6 |
||
| CDS-3UTR CAA 90 bp | AGAATGAACACATTCCTCACGTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTAGGGTTGCTCTGTaGGATCTCTATTGCTACGCA | + |
|
Preference number: 5 (lower is better) Translates to: RMNTFLTCVTRLSGRLSLCRVAL*DLYCYA Trigger: TGCGTAGCAATAGAGATCCAACAGAGCAACCCTACA...CAGACTGAGACGCCCAGACAATCGAGTCACACACGTGAGGAATGTGTTCATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS TCA 90 bp | AGATCCGTCTGTGGGGTAAAACAGCAGCTCATAGCGTCGGAGCAATaGAGCATTTGGATCATACCACTCTGCAATGAAAGCGAATCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RSVCGVKQQLIASEQ*SIWIIPLCNESESL Trigger: GAGAGATTCGCTTTCATTGCAGAGTGGTATGATCCAAATGCTTCATTGCTCCGACGCTATGAGCTGCTGTTTTACCCCACAGACGGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086028.6 ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS-3UTR CAA 90 bp | AATAAAAGAATGAACACATTCCTCACGTGTGTGACTCGATTGTCTGGGCGTCTCCGCAGGTCCTCATACTaGGTCCGCTTTAAGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NKRMNTFLTCVTRLSGRLRRSSY*VRFKKV Trigger: CACCTTCTTAAAGCGGACCAAGTATGAGGACCTGCG...GAGACGCCCAGACAATCGAGTCACACACGTGAGGAATGTGTTCATTCTTTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS TCA 90 bp | CATAGCGTCGGAGCAATGAAGCATTTGGATCATACCACTCTGCAATaGAAGCGAATCTCTCGCTCTGATTCTTGGGTGCCATATATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HSVGAMKHLDHTTLQ*KRISRSDSWVPYME Trigger: CTCCATATATGGCACCCAAGAATCAGAGCGAGAGATTCGCTTTCATTGCAGAGTGGTATGATCCAAATGCTTCATTGCTCCGACGCTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086028.6 ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS-3UTR CAA 90 bp | ACGTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGAAATGTCTTTGTAGGGTaGCTCTGTTGGATCTCTATT | + |
|
Preference number: 5 (lower is better) Translates to: TCVTRLSGRLSLCRLYSGNVFVG*LCWISI Trigger: AATAGAGATCCAACAGAGCAACCCTACAAAGACATT...TCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACACGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS GCA 90 bp | ATACCACTCTGCAATGAAAGCGAATCTCTCGCTCTGATTCTTGGGTaGCATATATGGAGAAACCAAACTGGAACTTCTTCCCTGCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: IPLCNESESLALILG*HIWRNQTGTSSLLT Trigger: TGTCAGCAGGGAAGAAGTTCCAGTTTGGTTTCTCCATATATGGCACCCAAGAATCAGAGCGAGAGATTCGCTTTCATTGCAGAGTGGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086028.6 ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS GCA 90 bp | GAATTCTCGAAATGTCTTTGTAGGGTTGCTCTGTTGGATCTCTATTaGTACGCAAGGGCCGGAGCACAGCTCTGTCACCATATCATTATA | + |
|
Preference number: 5 (lower is better) Translates to: EFSKCLCRVALLDLY*YARAGAQLCHHIII Trigger: TATAATGATATGGTGACAGAGCTGTGCTCCGGCCCTTGCGTAGCAATAGAGATCCAACAGAGCAACCCTACAAAGACATTTCGAGAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGACTCGATTGTCTGGGCGTCTCAGTCTGTGTCGTCTTTACTCTGGAGAGTCATCATTCGGAGTTaGGTTATAGTAAATCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: VCDSIVWASQSVSSLLWRVIIRS*VIVNPL Trigger: AAGTGGATTTACTATAACCAAACTCCGAATGATGAC...TCTCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTCACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS-3UTR CAA 90 bp | AATAAAAGAATGAACACATTCCTCACGTGTGTGACTCGATTGTCTGGGCGTCTCTGTAGGGTTGCTCTGTaGGATCTCTATTGCTACGCA | + |
|
Preference number: 5 (lower is better) Translates to: NKRMNTFLTCVTRLSGRLCRVAL*DLYCYA Trigger: TGCGTAGCAATAGAGATCCAACAGAGCAACCCTACA...GAGACGCCCAGACAATCGAGTCACACACGTGAGGAATGTGTTCATTCTTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS-3UTR CAA 90 bp | AATAAAAGAATGAACACATTCCTCACGTGTGTGACTCGATTGTCTGGGCGTCTCGGAGCAATGAAGCATTaGGATCATACCACTCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: NKRMNTFLTCVTRLSGRLGAMKH*DHTTLQ Trigger: TTGCAGAGTGGTATGATCCAAATGCTTCATTGCTCC...GAGACGCCCAGACAATCGAGTCACACACGTGAGGAATGTGTTCATTCTTTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS TCA 90 bp | GCATTTGGATCATACCACTCTGCAATGAAAGCGAATCTCTCGCTCTaGTTCTTGGGTGCCATATATGGAGAAACCAAACTGGAACTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AFGSYHSAMKANLSL*FLGAIYGETKLELL Trigger: AAGAAGTTCCAGTTTGGTTTCTCCATATATGGCACCCAAGAATCAGAGCGAGAGATTCGCTTTCATTGCAGAGTGGTATGATCCAAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086028.6 ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTGGAGGCATCATGCGCTGGTGCTGCGTCCTTATGAATGTTTTGACCATGTCATCATTCGGAGTTaGGTTATAGTAAATCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: FLWRHHALVLRPYECFDHVIIRS*VIVNPL Trigger: AAGTGGATTTACTATAACCAAACTCCGAATGATGAC...ATGGTCAAAACATTCATAAGGACGCAGCACCAGCGCATGATGCCTCCAGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193808.6 |
||
| CDS-3UTR CAA 90 bp | GTGGCTAGTGATGGGCTGGGTAGTTTGCTTATTCGTCCATTTCCTTTCCTTCTTAATGTCTTTGTAGGGTaGCTCTGTTGGATCTCTATT | + |
|
Preference number: 5 (lower is better) Translates to: VASDGLGSLLIRPFPFLLNVFVG*LCWISI Trigger: AATAGAGATCCAACAGAGCAACCCTACAAAGACATT...AAGAAGGAAAGGAAATGGACGAATAAGCAAACTACCCAGCCCATCACTAGCCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193808.6 |
||
| CDS-3UTR CAA 90 bp | AATAAAAGAATGAACACATTCCTCACGTGTGTGACTCGATTGTCTGGGCGTCTCAATGTCTTTGTAGGGTaGCTCTGTTGGATCTCTATT | + |
|
Preference number: 5 (lower is better) Translates to: NKRMNTFLTCVTRLSGRLNVFVG*LCWISI Trigger: AATAGAGATCCAACAGAGCAACCCTACAAAGACATT...GAGACGCCCAGACAATCGAGTCACACACGTGAGGAATGTGTTCATTCTTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS-3UTR CAA 90 bp | AATAAAAGAATGAACACATTCCTCACGTGTGTGACTCGATTGTCTGGGCGTCTCGTCATCATTCGGAGTTaGGTTATAGTAAATCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: NKRMNTFLTCVTRLSGRLVIIRS*VIVNPL Trigger: AAGTGGATTTACTATAACCAAACTCCGAATGATGAC...GAGACGCCCAGACAATCGAGTCACACACGTGAGGAATGTGTTCATTCTTTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS TCA 90 bp | CGAATAGCTATTAAAATCTTTCCCAACATTCCTTCACTGATAGCATaGGGCTTAATGATGCAACAGGTGCAATTGGTAAATTTAGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RIAIKIFPNIPSLIA*GLMMQQVQLVNLAV Trigger: CACTGCTAAATTTACCAATTGCACCTGTTGCATCATTAAGCCTCATGCTATCAGTGAAGGAATGTTGGGAAAGATTTTAATAGCTATTCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS CAA 90 bp | GGGCTCGGATGCTTCCGGGGGCATCTGTCCGTGATAGCCCAGAGTTaGCGGGTCCAAGCAACCTTTTCCACTCACAGATCGCGTCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: GLGCFRGHLSVIAQS*RVQATFSTHRSRHL Trigger: GAGATGACGCGATCTGTGAGTGGAAAAGGTTGCTTGGACCCGCAAACTCTGGGCTATCACGGACAGATGCCCCCGGAAGCATCCGAGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086028.6 ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS GCA 72 bp | CATTTCTCACGCCATCTGTCCCAAAGAGGGCTCGGATaGTTCCGGGGGCATCTGTCCGTGATAGCCCAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: HFSRHLSQRGLG*FRGHLSVIAQS Trigger: ACTCTGGGCTATCACGGACAGATGCCCCCGGAAGCATCCGAGCCCTCTTTGGGACAGATGGCGTGAGAAATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086028.6 ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS CAA 72 bp | TGCTTCCGGGGGCATCTGTCCGTGATAGCCCAGAGTTaGCGGGTCCAAGCAACCTTTTCCACTCACAGATCG | + |
|
Preference number: 6 (lower is better) Translates to: CFRGHLSVIAQS*RVQATFSTHRS Trigger: CGATCTGTGAGTGGAAAAGGTTGCTTGGACCCGCAAACTCTGGGCTATCACGGACAGATGCCCCCGGAAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086028.6 ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS GCA 72 bp | TCTGGCAGCAGATGCAAAAGTATCAGGGCCGTGAGCTaGATTTCTCACGCCATCTGTCCCAAAGAGGGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SGSRCKSIRAVS*ISHAICPKEGS Trigger: CGAGCCCTCTTTGGGACAGATGGCGTGAGAAATGCAGCTCACGGCCCTGATACTTTTGCATCTGCTGCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086028.6 ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS CAA 90 bp | AGCAGGTCCGCAGAATTCTCGAAATGTCTTTGTAGGGTTGCTCTGTaGGATCTCTATTGCTACGCAAGGGCCGGAGCACAGCTCTGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: SRSAEFSKCLCRVAL*DLYCYARAGAQLCH Trigger: GTGACAGAGCTGTGCTCCGGCCCTTGCGTAGCAATAGAGATCCAACAGAGCAACCCTACAAAGACATTTCGAGAATTCTGCGGACCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS CAA 90 bp | TCAGGATCAGCAGGTCCGCAGAATTCTCGAAATGTCTTTGTAGGGTaGCTCTGTTGGATCTCTATTGCTACGCAAGGGCCGGAGCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: SGSAGPQNSRNVFVG*LCWISIATQGPEHS Trigger: GCTGTGCTCCGGCCCTTGCGTAGCAATAGAGATCCAACAGAGCAACCCTACAAAGACATTTCGAGAATTCTGCGGACCTGCTGATCCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS CAA 90 bp | CTCCAGGAGCCCATCCTCCGGCAGATCCGTGCAATGAACAGCATTTaGAACCTTAGTTTTACCAAAAATTGCCCTGAGGGTCTCAGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: LQEPILRQIRAMNSI*NLSFTKNCPEGLRS Trigger: CGACCTGAGACCCTCAGGGCAATTTTTGGTAAAACTAAGGTTCAAAATGCTGTTCATTGCACGGATCTGCCGGAGGATGGGCTCCTGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS CAA 72 bp | GCAGGTCCGCAGAATTCTCGAAATGTCTTTGTAGGGTaGCTCTGTTGGATCTCTATTGCTACGCAAGGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: AGPQNSRNVFVG*LCWISIATQGP Trigger: CGGCCCTTGCGTAGCAATAGAGATCCAACAGAGCAACCCTACAAAGACATTTCGAGAATTCTGCGGACCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS GCA 72 bp | AAATGTCTTTGTAGGGTTGCTCTGTTGGATCTCTATTaGTACGCAAGGGCCGGAGCACAGCTCTGTCACCAT | + |
|
Preference number: 6 (lower is better) Translates to: KCLCRVALLDLY*YARAGAQLCHH Trigger: ATGGTGACAGAGCTGTGCTCCGGCCCTTGCGTAGCAATAGAGATCCAACAGAGCAACCCTACAAAGACATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS CCA 72 bp | CAGAATTCTCGAAATGTCTTTGTAGGGTTGCTCTGTTaGATCTCTATTGCTACGCAAGGGCCGGAGCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: QNSRNVFVGLLC*ISIATQGPEHS Trigger: GCTGTGCTCCGGCCCTTGCGTAGCAATAGAGATCCAACAGAGCAACCCTACAAAGACATTTCGAGAATTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS CAA 72 bp | GCAGAATTCTCGAAATGTCTTTGTAGGGTTGCTCTGTaGGATCTCTATTGCTACGCAAGGGCCGGAGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: AEFSKCLCRVAL*DLYCYARAGAQ Trigger: CTGTGCTCCGGCCCTTGCGTAGCAATAGAGATCCAACAGAGCAACCCTACAAAGACATTTCGAGAATTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
||
| CDS CAA 90 bp | TTTATCATCTCAATGATTTCTCCGGCCTTTGACACTGCATCTGGTTaGATCAGGGCTAAAGTTTTCTCTTTCCTGCTGCCCAGCTGGCGG | + |
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Preference number: 6 (lower is better) Translates to: FIISMISPAFDTASG*IRAKVFSFLLPSWR Trigger: CCGCCAGCTGGGCAGCAGGAAAGAGAAAACTTTAGCCCTGATCAAACCAGATGCAGTGTCAAAGGCCGGAGAAATCATTGAGATGATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086028.6 ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS TCA 72 bp | GGAGCAATGAAGCATTTGGATCATACCACTCTGCAATaGAAGCGAATCTCTCGCTCTGATTCTTGGGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: GAMKHLDHTTLQ*KRISRSDSWVP Trigger: TGGCACCCAAGAATCAGAGCGAGAGATTCGCTTTCATTGCAGAGTGGTATGATCCAAATGCTTCATTGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086028.6 ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS TCA 72 bp | TGTGGGGTAAAACAGCAGCTCATAGCGTCGGAGCAATaGAGCATTTGGATCATACCACTCTGCAATGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: CGVKQQLIASEQ*SIWIIPLCNES Trigger: GCTTTCATTGCAGAGTGGTATGATCCAAATGCTTCATTGCTCCGACGCTATGAGCTGCTGTTTTACCCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086028.6 ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS GCA 72 bp | GGCGCAGGTCCTCATACTTGGTCCGCTTTAAGAAGGTaGGACGATTCTTTACATCATGCATTTCAACAGATC | + |
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Preference number: 6 (lower is better) Translates to: GAGPHTWSALRR*DDSLHHAFQQI Trigger: GATCTGTTGAAATGCATGATGTAAAGAATCGTCGCACCTTCTTAAAGCGGACCAAGTATGAGGACCTGCGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086028.6 ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS CCA 72 bp | AGCGAATCTCTCGCTCTGATTCTTGGGTGCCATATATaGAGAAACCAAACTGGAACTTCTTCCCTGCTGACA | + |
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Preference number: 6 (lower is better) Translates to: SESLALILGCHI*RNQTGTSSLLT Trigger: TGTCAGCAGGGAAGAAGTTCCAGTTTGGTTTCTCCATATATGGCACCCAAGAATCAGAGCGAGAGATTCGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086028.6 ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS CAA 72 bp | TCAATGATTTCTCCGGCCTTTGACACTGCATCTGGTTaGATCAGGGCTAAAGTTTTCTCTTTCCTGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: SMISPAFDTASG*IRAKVFSFLLP Trigger: GGGCAGCAGGAAAGAGAAAACTTTAGCCCTGATCAAACCAGATGCAGTGTCAAAGGCCGGAGAAATCATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086028.6 ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS CAA 72 bp | CCCATCCTCCGGCAGATCCGTGCAATGAACAGCATTTaGAACCTTAGTTTTACCAAAAATTGCCCTGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: PILRQIRAMNSI*NLSFTKNCPEG Trigger: ACCCTCAGGGCAATTTTTGGTAAAACTAAGGTTCAAAATGCTGTTCATTGCACGGATCTGCCGGAGGATGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS CCA 72 bp | GATTCTTTACATCATGCATTTCAACAGATCCGTCTGTaGGGTAAAACAGCAGCTCATAGCGTCGGAGCAATG | + |
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Preference number: 6 (lower is better) Translates to: DSLHHAFQQIRL*GKTAAHSVGAM Trigger: CATTGCTCCGACGCTATGAGCTGCTGTTTTACCCCACAGACGGATCTGTTGAAATGCATGATGTAAAGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086028.6 ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS CAA 72 bp | CCTATAAATAGATCTTCCAGGCGCAGGTCCTCATACTaGGTCCGCTTTAAGAAGGTGCGACGATTCTTTACA | + |
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Preference number: 6 (lower is better) Translates to: PINRSSRRRSSY*VRFKKVRRFFT Trigger: TGTAAAGAATCGTCGCACCTTCTTAAAGCGGACCAAGTATGAGGACCTGCGCCTGGAAGATCTATTTATAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086028.6 ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS TCA 72 bp | TCATACCACTCTGCAATGAAAGCGAATCTCTCGCTCTaGTTCTTGGGTGCCATATATGGAGAAACCAAACTG | + |
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Preference number: 6 (lower is better) Translates to: SYHSAMKANLSL*FLGAIYGETKL Trigger: CAGTTTGGTTTCTCCATATATGGCACCCAAGAATCAGAGCGAGAGATTCGCTTTCATTGCAGAGTGGTATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086028.6 ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS GCA 72 bp | TGCAATGAAAGCGAATCTCTCGCTCTGATTCTTGGGTaGCATATATGGAGAAACCAAACTGGAACTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: CNESESLALILG*HIWRNQTGTSS Trigger: GGAAGAAGTTCCAGTTTGGTTTCTCCATATATGGCACCCAAGAATCAGAGCGAGAGATTCGCTTTCATTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086028.6 ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS CAA 72 bp | ATCAACACCAGCTGTCGAGAAAACACATTGACTTTGTaGCCTATAAATAGATCTTCCAGGCGCAGGTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: INTSCRENTLTL*PINRSSRRRSS Trigger: TGAGGACCTGCGCCTGGAAGATCTATTTATAGGCAACAAAGTCAATGTGTTTTCTCGACAGCTGGTGTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086028.6 ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS CAA 72 bp | TCAATCAACACCAGCTGTCGAGAAAACACATTGACTTaGTTGCCTATAAATAGATCTTCCAGGCGCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: SINTSCRENTLT*LPINRSSRRRS Trigger: GGACCTGCGCCTGGAAGATCTATTTATAGGCAACAAAGTCAATGTGTTTTCTCGACAGCTGGTGTTGATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086028.6 ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS CAA 90 bp | ACTTTGTTGCCTATAAATAGATCTTCCAGGCGCAGGTCCTCATACTaGGTCCGCTTTAAGAAGGTGCGACGATTCTTTACATCATGCATT | + |
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Preference number: 6 (lower is better) Translates to: TLLPINRSSRRRSSY*VRFKKVRRFFTSCI Trigger: AATGCATGATGTAAAGAATCGTCGCACCTTCTTAAAGCGGACCAAGTATGAGGACCTGCGCCTGGAAGATCTATTTATAGGCAACAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086028.6 ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS TCA 72 bp | TGTGATAAACTGGATCAGTTCGTTATAAAAAGGTCTTaGGTGATGGTCTACATGAAAGTCCGCTGCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: CDKLDQFVIKRS*VMVYMKVRCFF Trigger: AAAGAAGCAGCGGACTTTCATGTAGACCATCACTCAAGACCTTTTTATAACGAACTGATCCAGTTTATCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086028.6 ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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| CDS TCA 72 bp | ATTAAAATCTTTCCCAACATTCCTTCACTGATAGCATaGGGCTTAATGATGCAACAGGTGCAATTGGTAAAT | + |
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Preference number: 6 (lower is better) Translates to: IKIFPNIPSLIA*GLMMQQVQLVN Trigger: ATTTACCAATTGCACCTGTTGCATCATTAAGCCTCATGCTATCAGTGAAGGAATGTTGGGAAAGATTTTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191947.6 ENSMUST00000193683.6 ENSMUST00000193808.6 |
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