Pregenerated sensors for NME4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024177Ensembl transcript IDs: ENSMUST00000025007.7, ENSMUST00000235157.2, ENSMUST00000236128.2, ENSMUST00000236547.2, ENSMUST00000236967.2
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGCTGGAGTTGGGTAGAGCGGGAGTAGGGAGTGGTTTGGGGACATaGGAAGCATGGGGGCTTGACTTCTTGTTGACAGAGGTAGTAGGT | + |
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Preference number: 1 (lower is better) Translates to: GLELGRAGVGSGLGT*EAWGLDFLLTEVVG Trigger: ACCTACTACCTCTGTCAACAAGAAGTCAAGCCCCCATGCTTCCCATGTCCCCAAACCACTCCCTACTCCCGCTCTACCCAACTCCAGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAGGCAGGTGAAGTCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTAGCGGGAGTAGGGAGTaGTTTGGGGACATGGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: LRQVKSPLTMPQRLSGTFSGSRE*FGDMGS Trigger: GCTTCCCATGTCCCCAAACCACTCCCTACTCCCGCT...AAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGACTTCACCTGCCTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATGGTCAGCGGGAGTAGGGAGTaGTTTGGGGACATGGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: PLTMPQRLSGTFVHKDMVSGSRE*FGDMGS Trigger: GCTTCCCATGTCCCCAAACCACTCCCTACTCCCGCT...GACCATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGGTGAAGTCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACATGGGTAGACCTGAAGTaGAGAAGGCAGTGCAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: AGEVTFDNAPKVVWHFCTWVDLK*RRQCKP Trigger: GGGCTTGCACTGCCTTCTGCACTTCAGGTCTACCCA...TGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGACTTCACCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATGGTCTGGGTAGACCTGAAGTaGAGAAGGCAGTGCAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: PLTMPQRLSGTFVHKDMVWVDLK*RRQCKP Trigger: GGGCTTGCACTGCCTTCTGCACTTCAGGTCTACCCA...GACCATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| 3UTR-3UTR CCA 90 bp | TCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATGAGCGGGAGTAGGGAGTaGTTTGGGGACATGGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: SPLTMPQRLSGTFVHKDMSGSRE*FGDMGS Trigger: GCTTCCCATGTCCCCAAACCACTCCCTACTCCCGCT...CATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| 3UTR-3UTR GCA 90 bp | ACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATGGTTGGGTAGACCTGAAGTaGAGAAGGCAGTGCAAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: TFDNAPKVVWHFCTQGHGWVDLK*RRQCKP Trigger: GGGCTTGCACTGCCTTCTGCACTTCAGGTCTACCCA...ACCATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATGGTCAGAGGTAGTAGGTCATaGGTAGACCTGAAGTGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: PLTMPQRLSGTFVHKDMVRGSRS*VDLKCR Trigger: TCTGCACTTCAGGTCTACCCATGACCTACTACCTCT...GACCATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| 3UTR-3UTR CCA 90 bp | GTCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATAGAGGTAGTAGGTCATaGGTAGACCTGAAGTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: VTFDNAPKVVWHFCTQGHRGSRS*VDLKCR Trigger: TCTGCACTTCAGGTCTACCCATGACCTACTACCTCT...ATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATGGTAGAGGTAGTAGGTCATaGGTAGACCTGAAGTGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: TFDNAPKVVWHFCTQGHGRGSRS*VDLKCR Trigger: TCTGCACTTCAGGTCTACCCATGACCTACTACCTCT...ACCATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| 3UTR-3UTR GCA 90 bp | AGGTTGTCTGGCACTTTTGTACACAAGGACATGGTCCAATATTGTATTGACTTATGGGTAGACCTGAAGTaGAGAAGGCAGTGCAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: RLSGTFVHKDMVQYCIDLWVDLK*RRQCKP Trigger: GGGCTTGCACTGCCTTCTGCACTTCAGGTCTACCCA...TAAGTCAATACAATATTGGACCATGTCCTTGTGTACAAAAGTGCCAGACAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| 3UTR-3UTR CCA 90 bp | GTACACAAGGACATGGTCCAATATTGTATTGACTTAGGATACAAAAAGGCACATAGCGGGAGTAGGGAGTaGTTTGGGGACATGGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: VHKDMVQYCIDLGYKKAHSGSRE*FGDMGS Trigger: GCTTCCCATGTCCCCAAACCACTCCCTACTCCCGCT...ATGTGCCTTTTTGTATCCTAAGTCAATACAATATTGGACCATGTCCTTGTGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| 3UTR-3UTR CCA 90 bp | GTACACAAGGACATGGTCCAATATTGTATTGACTTAGGATACAAAAAGGCACATAGTGGTTTGGGGACATaGGAAGCATGGGGGCTTGAC | + |
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Preference number: 2 (lower is better) Translates to: VHKDMVQYCIDLGYKKAHSGLGT*EAWGLD Trigger: GTCAAGCCCCCATGCTTCCCATGTCCCCAAACCACT...ATGTGCCTTTTTGTATCCTAAGTCAATACAATATTGGACCATGTCCTTGTGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| 3UTR-3UTR TCA 90 bp | GTCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATGGTCCAATATTGTATTaGCTTAGGATACAAAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: VTFDNAPKVVWHFCTQGHGPILY*LRIQKG Trigger: GCCTTTTTGTATCCTAAGTCAATACAATATTGGACC...ATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTTGTCTGGCACTTTTGTACACAAGGACATGGTCCAATATTGTATTGACTTAAGAGGTAGTAGGTCATaGGTAGACCTGAAGTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: RLSGTFVHKDMVQYCIDLRGSRS*VDLKCR Trigger: TCTGCACTTCAGGTCTACCCATGACCTACTACCTCT...TAAGTCAATACAATATTGGACCATGTCCTTGTGTACAAAAGTGCCAGACAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| 3UTR CCA 72 bp | GCGGGAGTAGGGAGTGGTTTGGGGACATGGGAAGCATaGGGGCTTGACTTCTTGTTGACAGAGGTAGTAGGT | + |
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Preference number: 3 (lower is better) Translates to: AGVGSGLGTWEA*GLDFLLTEVVG Trigger: ACCTACTACCTCTGTCAACAAGAAGTCAAGCCCCCATGCTTCCCATGTCCCCAAACCACTCCCTACTCCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| 3UTR CCA 72 bp | TTGGGTAGAGCGGGAGTAGGGAGTGGTTTGGGGACATaGGAAGCATGGGGGCTTGACTTCTTGTTGACAGAG | + |
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Preference number: 3 (lower is better) Translates to: LGRAGVGSGLGT*EAWGLDFLLTE Trigger: CTCTGTCAACAAGAAGTCAAGCCCCCATGCTTCCCATGTCCCCAAACCACTCCCTACTCCCGCTCTACCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGAGTTGGGTAGAGCGGGAGTAGGGAGTGGTTTGGGGACATGGGAAGCATGGGGGCTTGACTTCTTGTaGACAGAGGTAGTAGGTCAT | + |
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Preference number: 3 (lower is better) Translates to: LELGRAGVGSGLGTWEAWGLDFL*TEVVGH Trigger: ATGACCTACTACCTCTGTCAACAAGAAGTCAAGCCC...CCATGCTTCCCATGTCCCCAAACCACTCCCTACTCCCGCTCTACCCAACTCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| 3UTR TCA 72 bp | AGGGAGTGGTTTGGGGACATGGGAAGCATGGGGGCTTaGCTTCTTGTTGACAGAGGTAGTAGGTCATGGGTA | + |
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Preference number: 3 (lower is better) Translates to: REWFGDMGSMGA*LLVDRGSRSWV Trigger: TACCCATGACCTACTACCTCTGTCAACAAGAAGTCAAGCCCCCATGCTTCCCATGTCCCCAAACCACTCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| 3UTR-3UTR CAA 90 bp | CCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATGGTCGGGCTTGACTTCTTGTaGACAGAGGTAGTAGGTCAT | + |
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Preference number: 3 (lower is better) Translates to: PLTMPQRLSGTFVHKDMVGLDFL*TEVVGH Trigger: ATGACCTACTACCTCTGTCAACAAGAAGTCAAGCCC...GACCATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| 3UTR-3UTR CAA 90 bp | TCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATGGGGCTTGACTTCTTGTaGACAGAGGTAGTAGGTCAT | + |
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Preference number: 3 (lower is better) Translates to: SPLTMPQRLSGTFVHKDMGLDFL*TEVVGH Trigger: ATGACCTACTACCTCTGTCAACAAGAAGTCAAGCCC...CATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| 3UTR-3UTR CAA 90 bp | ACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATGGTGGGCTTGACTTCTTGTaGACAGAGGTAGTAGGTCAT | + |
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Preference number: 3 (lower is better) Translates to: TFDNAPKVVWHFCTQGHGGLDFL*TEVVGH Trigger: ATGACCTACTACCTCTGTCAACAAGAAGTCAAGCCC...ACCATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGGTTGTCTGGCACTTTTGTACACAAGGACATGGTCCAATATTGTATTGACTGGAGTAGGGAGTGGTTaGGGGACATGGGAAGCATGG | + |
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Preference number: 3 (lower is better) Translates to: KGCLALLYTRTWSNIVLTGVGSG*GTWEAW Trigger: CCATGCTTCCCATGTCCCCAAACCACTCCCTACTCC...AGTCAATACAATATTGGACCATGTCCTTGTGTACAAAAGTGCCAGACAACCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR GCA 90 bp | CTGGAGTTGGGTAGAGCGGGAGTAGGGAGTGGTTTGGGGACATGGGAAGCATGGAGGCAGGGTAGCAGCTaGTGTGGTGACCACCATCTG | + |
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Preference number: 4 (lower is better) Translates to: LELGRAGVGSGLGTWEAWRQGSS*CGDHHL Trigger: CAGATGGTGGTCACCACAGCAGCTGCTACCCTGCCT...CCATGCTTCCCATGTCCCCAAACCACTCCCTACTCCCGCTCTACCCAACTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR GCA 90 bp | CTGGAGTTGGGTAGAGCGGGAGTAGGGAGTGGTTTGGGGACATGGGAAGCATGGATGCTTTCTGGTGCCTaGAGCATCTTCATCCCCACG | + |
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Preference number: 4 (lower is better) Translates to: LELGRAGVGSGLGTWEAWMLSGA*SIFIPT Trigger: CGTGGGGATGAAGATGCTGCAGGCACCAGAAAGCAT...CCATGCTTCCCATGTCCCCAAACCACTCCCTACTCCCGCTCTACCCAACTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR GCA 90 bp | TTGAGGCAGGTGAAGTCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGCTGGGGACCCTGGGTaGCCTGGGCTCAATCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: LRQVKSPLTMPQRLSGTFAGDPG*PGLNPS Trigger: GCTTGGATTGAGCCCAGGGCACCCAGGGTCCCCAGC...AAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGACTTCACCTGCCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000235157.2 ENSMUST00000236967.2 |
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| CDS-3UTR GCA 90 bp | ACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATGGTGCTGGGGACCCTGGGTaGCCTGGGCTCAATCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: TFDNAPKVVWHFCTQGHGAGDPG*PGLNPS Trigger: GCTTGGATTGAGCCCAGGGCACCCAGGGTCCCCAGC...ACCATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000235157.2 ENSMUST00000236967.2 |
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| CDS-3UTR CCA 90 bp | GTCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATTGCCCTGCTGTACCATaGCCACCACAGGCCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: VTFDNAPKVVWHFCTQGHCPAVP*PPQAQS Trigger: GCTCTGGGCCTGTGGTGGCCATGGTACAGCAGGGCA...ATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235157.2 ENSMUST00000236967.2 |
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| CDS-3UTR TCA 90 bp | GTCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATTCATCCCCACGAGCTTaGAGCCCCGCCTCTCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: VTFDNAPKVVWHFCTQGHSSPRA*SPASQS Trigger: GCTTTGAGAGGCGGGGCTTCAAGCTCGTGGGGATGA...ATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000025007.7 ENSMUST00000236547.2 |
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| CDS-3UTR TCA 90 bp | GCAGGTGAAGTCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACAGGGGGCTGCCTCTGTTaGGTCGGTGTGTCCTATCAT | + |
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Preference number: 4 (lower is better) Translates to: AGEVTFDNAPKVVWHFCTGGCLC*VGVSYH Trigger: ATGATAGGACACACCGACTCAACAGAGGCAGCCCCC...TGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGACTTCACCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR GCA 90 bp | TTGAGGCAGGTGAAGTCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTAGGCAGGGTAGCAGCTaGTGTGGTGACCACCATCTG | + |
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Preference number: 4 (lower is better) Translates to: LRQVKSPLTMPQRLSGTFRQGSS*CGDHHL Trigger: CAGATGGTGGTCACCACAGCAGCTGCTACCCTGCCT...AAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGACTTCACCTGCCTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR TCA 90 bp | GTCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATGGGGGCTGCCTCTGTTaGGTCGGTGTGTCCTATCAT | + |
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Preference number: 4 (lower is better) Translates to: VTFDNAPKVVWHFCTQGHGGCLC*VGVSYH Trigger: ATGATAGGACACACCGACTCAACAGAGGCAGCCCCC...ATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR GCA 90 bp | GTCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATAGGCAGGGTAGCAGCTaGTGTGGTGACCACCATCTG | + |
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Preference number: 4 (lower is better) Translates to: VTFDNAPKVVWHFCTQGHRQGSS*CGDHHL Trigger: CAGATGGTGGTCACCACAGCAGCTGCTACCCTGCCT...ATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR CCA 90 bp | CCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATGGTCTCTAGCACCCTCTTCTaGCTTCTGCAGGCACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: PLTMPQRLSGTFVHKDMVSSTLF*LLQALL Trigger: CAGCAGTGCCTGCAGAAGCCAGAAGAGGGTGCTAGA...GACCATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235157.2 ENSMUST00000236547.2 |
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| CDS-3UTR TCA 90 bp | TTGAGGCAGGTGAAGTCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTAACAGTTCGCTGCTCTaGAACCACAGCTCGATCTCC | + |
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Preference number: 4 (lower is better) Translates to: LRQVKSPLTMPQRLSGTFNSSLL*NHSSIS Trigger: GGAGATCGAGCTGTGGTTTCAGAGCAGCGAACTGTT...AAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGACTTCACCTGCCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR TCA 90 bp | CCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATGGTCCCTTTGCTCGGAGAATaGCACCCCAAAGACCCATTC | + |
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Preference number: 4 (lower is better) Translates to: PLTMPQRLSGTFVHKDMVPLLGE*HPKDPF Trigger: GAATGGGTCTTTGGGGTGTCATTCTCCGAGCAAAGG...GACCATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000235157.2 ENSMUST00000236967.2 |
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| CDS-3UTR CCA 90 bp | TTGAGGCAGGTGAAGTCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTATGGCCCTTGAGATATaGACCACATTGGGGCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LRQVKSPLTMPQRLSGTFMALEI*TTLGPS Trigger: GGAAGGCCCCAATGTGGTCCATATCTCAAGGGCCAT...AAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGACTTCACCTGCCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR TCA 90 bp | GCAGGTGAAGTCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACATCCTATCATGGCCCTTaGGATATGGACCACATTGGG | + |
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Preference number: 4 (lower is better) Translates to: AGEVTFDNAPKVVWHFCTSYHGP*DMDHIG Trigger: CCCAATGTGGTCCATATCTCAAGGGCCATGATAGGA...TGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGACTTCACCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR TCA 90 bp | TTGAGGCAGGTGAAGTCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTTCCTATCATGGCCCTTaGGATATGGACCACATTGGG | + |
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Preference number: 4 (lower is better) Translates to: LRQVKSPLTMPQRLSGTFSYHGP*DMDHIG Trigger: CCCAATGTGGTCCATATCTCAAGGGCCATGATAGGA...AAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGACTTCACCTGCCTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR TCA 90 bp | TCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATGAACAGTTCGCTGCTCTaGAACCACAGCTCGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPLTMPQRLSGTFVHKDMNSSLL*NHSSIS Trigger: GGAGATCGAGCTGTGGTTTCAGAGCAGCGAACTGTT...CATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR TCA 90 bp | GTCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATAACAGTTCGCTGCTCTaGAACCACAGCTCGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VTFDNAPKVVWHFCTQGHNSSLL*NHSSIS Trigger: GGAGATCGAGCTGTGGTTTCAGAGCAGCGAACTGTT...ATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR TCA 90 bp | ACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATGGTAACAGTTCGCTGCTCTaGAACCACAGCTCGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TFDNAPKVVWHFCTQGHGNSSLL*NHSSIS Trigger: GGAGATCGAGCTGTGGTTTCAGAGCAGCGAACTGTT...ACCATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR GCA 90 bp | GTCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATATGCTTTCTGGTGCCTaGAGCATCTTCATCCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: VTFDNAPKVVWHFCTQGHMLSGA*SIFIPT Trigger: CGTGGGGATGAAGATGCTGCAGGCACCAGAAAGCAT...ATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR GCA 90 bp | TTGAGGCAGGTGAAGTCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTAAGGATGCTTTCTGGTaGCTGCAGCATCTTCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRQVKSPLTMPQRLSGTFKDAFW*LQHLHP Trigger: GGGATGAAGATGCTGCAGGCACCAGAAAGCATCCTT...AAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGACTTCACCTGCCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR CCA 90 bp | TCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATGAGATATGGACCACATTaGGGCCTTCCCAGACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SPLTMPQRLSGTFVHKDMRYGPH*GLPRPW Trigger: CCATGGTCTGGGAAGGCCCCAATGTGGTCCATATCT...CATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025007.7 ENSMUST00000236547.2 |
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| CDS-3UTR CCA 90 bp | GTCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATATGGCCCTTGAGATATaGACCACATTGGGGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VTFDNAPKVVWHFCTQGHMALEI*TTLGPS Trigger: GGAAGGCCCCAATGTGGTCCATATCTCAAGGGCCAT...ATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR CCA 90 bp | AAAGGTTGTCTGGCACTTTTGTACACAAGGACATGGTCCAATATTGTATTGACTTGCCCTGCTGTACCATaGCCACCACAGGCCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KGCLALLYTRTWSNIVLTCPAVP*PPQAQS Trigger: GCTCTGGGCCTGTGGTGGCCATGGTACAGCAGGGCA...AGTCAATACAATATTGGACCATGTCCTTGTGTACAAAAGTGCCAGACAACCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235157.2 ENSMUST00000236967.2 |
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| CDS-3UTR CCA 90 bp | ACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATGGTAGATATGGACCACATTaGGGCCTTCCCAGACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TFDNAPKVVWHFCTQGHGRYGPH*GLPRPA Trigger: TGCAGGTCTGGGAAGGCCCCAATGTGGTCCATATCT...ACCATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235157.2 ENSMUST00000236967.2 |
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| CDS-3UTR CCA 90 bp | GTCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATAGATATGGACCACATTaGGGCCTTCCCAGACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VTFDNAPKVVWHFCTQGHRYGPH*GLPRPA Trigger: TGCAGGTCTGGGAAGGCCCCAATGTGGTCCATATCT...ATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235157.2 ENSMUST00000236967.2 |
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| 3UTR CAA 72 bp | AGGCAGGTGAAGTCACCTTTGACAATGCCCCAAAGGTaGTCTGGCACTTTTGTACACAAGGACATGGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RQVKSPLTMPQR*SGTFVHKDMVQ Trigger: TTGGACCATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGACTTCACCTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR TCA 90 bp | AGGTTGTCTGGCACTTTTGTACACAAGGACATGGTCCAATATTGTATTGACTTATCATCCCCACGAGCTTaGAGCCCCGCCTCTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLSGTFVHKDMVQYCIDLSSPRA*SPASQS Trigger: GCTTTGAGAGGCGGGGCTTCAAGCTCGTGGGGATGA...TAAGTCAATACAATATTGGACCATGTCCTTGTGTACAAAAGTGCCAGACAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025007.7 ENSMUST00000236547.2 |
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| CDS-3UTR CCA 90 bp | CCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATGGTCAGCAAGGATGCTTTCTaGTGCCTGCAGCATCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLTMPQRLSGTFVHKDMVSKDAF*CLQHLH Trigger: ATGAAGATGCTGCAGGCACCAGAAAGCATCCTTGCT...GACCATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR CCA 90 bp | CCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATGGTCGTAGCTGATAAGAGCTaGGTAGAATGGCTTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLTMPQRLSGTFVHKDMVVADKS*VEWLPL Trigger: CAGAGGAAGCCATTCTACCCAGCTCTTATCAGCTAC...GACCATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR CCA 90 bp | GTCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATAGCAAGGATGCTTTCTaGTGCCTGCAGCATCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VTFDNAPKVVWHFCTQGHSKDAF*CLQHLH Trigger: ATGAAGATGCTGCAGGCACCAGAAAGCATCCTTGCT...ATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR TCA 90 bp | GTACACAAGGACATGGTCCAATATTGTATTGACTTAGGATACAAAAAGGCACATGGGGGCTGCCTCTGTTaGGTCGGTGTGTCCTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: VHKDMVQYCIDLGYKKAHGGCLC*VGVSYH Trigger: ATGATAGGACACACCGACTCAACAGAGGCAGCCCCC...ATGTGCCTTTTTGTATCCTAAGTCAATACAATATTGGACCATGTCCTTGTGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR TCA 90 bp | AAAGGTTGTCTGGCACTTTTGTACACAAGGACATGGTCCAATATTGTATTGACTCCTTTGCTCGGAGAATaGCACCCCAAAGACCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: KGCLALLYTRTWSNIVLTPLLGE*HPKDPF Trigger: GAATGGGTCTTTGGGGTGTCATTCTCCGAGCAAAGG...AGTCAATACAATATTGGACCATGTCCTTGTGTACAAAAGTGCCAGACAACCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235157.2 ENSMUST00000236967.2 |
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| CDS-3UTR GCA 90 bp | AAAGGTTGTCTGGCACTTTTGTACACAAGGACATGGTCCAATATTGTATTGACTATGCTTTCTGGTGCCTaGAGCATCTTCATCCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: KGCLALLYTRTWSNIVLTMLSGA*SIFIPT Trigger: CGTGGGGATGAAGATGCTGCAGGCACCAGAAAGCAT...AGTCAATACAATATTGGACCATGTCCTTGTGTACAAAAGTGCCAGACAACCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR CCA 90 bp | AGGTTGTCTGGCACTTTTGTACACAAGGACATGGTCCAATATTGTATTGACTTAATGGCCCTTGAGATATaGACCACATTGGGGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLSGTFVHKDMVQYCIDLMALEI*TTLGPS Trigger: GGAAGGCCCCAATGTGGTCCATATCTCAAGGGCCAT...TAAGTCAATACAATATTGGACCATGTCCTTGTGTACAAAAGTGCCAGACAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR GCA 90 bp | AGGTTGTCTGGCACTTTTGTACACAAGGACATGGTCCAATATTGTATTGACTTAAAGGATGCTTTCTGGTaGCTGCAGCATCTTCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLSGTFVHKDMVQYCIDLKDAFW*LQHLHP Trigger: GGGATGAAGATGCTGCAGGCACCAGAAAGCATCCTT...TAAGTCAATACAATATTGGACCATGTCCTTGTGTACAAAAGTGCCAGACAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR TCA 90 bp | GTACACAAGGACATGGTCCAATATTGTATTGACTTAGGATACAAAAAGGCACATTCCTATCATGGCCCTTaGGATATGGACCACATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VHKDMVQYCIDLGYKKAHSYHGP*DMDHIG Trigger: CCCAATGTGGTCCATATCTCAAGGGCCATGATAGGA...ATGTGCCTTTTTGTATCCTAAGTCAATACAATATTGGACCATGTCCTTGTGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR CCA 90 bp | AGGTTGTCTGGCACTTTTGTACACAAGGACATGGTCCAATATTGTATTGACTTAAGCAAGGATGCTTTCTaGTGCCTGCAGCATCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLSGTFVHKDMVQYCIDLSKDAF*CLQHLH Trigger: ATGAAGATGCTGCAGGCACCAGAAAGCATCCTTGCT...TAAGTCAATACAATATTGGACCATGTCCTTGTGTACAAAAGTGCCAGACAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR CCA 90 bp | GTACACAAGGACATGGTCCAATATTGTATTGACTTAGGATACAAAAAGGCACATAGCAAGGATGCTTTCTaGTGCCTGCAGCATCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VHKDMVQYCIDLGYKKAHSKDAF*CLQHLH Trigger: ATGAAGATGCTGCAGGCACCAGAAAGCATCCTTGCT...ATGTGCCTTTTTGTATCCTAAGTCAATACAATATTGGACCATGTCCTTGTGTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS CCA 90 bp | GGCCTTCCCAGACCTGCAGCACAGATATGGGGGTTCGAGAGAAGCTaGGGACCCTGGGTGCCCTGGGCTCAATCCAAGCCCTTTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GLPRPAAQIWGFERS*GPWVPWAQSKPFPL Trigger: CAAAGGAAAGGGCTTGGATTGAGCCCAGGGCACCCAGGGTCCCCAGCTTCTCTCGAACCCCCATATCTGTGCTGCAGGTCTGGGAAGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235157.2 ENSMUST00000236967.2 |
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| CDS TCA 90 bp | CAGGCATCTAGCACCCTCTTCTGGCTTCTGCAGGCACTGCTGATGTaGACACTGAAGTCGCCCCTGATTGTCCCGGGGGCTGCCTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: QASSTLFWLLQALLM*TLKSPLIVPGAASV Trigger: AACAGAGGCAGCCCCCGGGACAATCAGGGGCGACTTCAGTGTTCACATCAGCAGTGCCTGCAGAAGCCAGAAGAGGGTGCTAGATGCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000235157.2 ENSMUST00000236128.2 ENSMUST00000236547.2 |
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| CDS GCA 90 bp | CTGCAGCACAGATATGGGGGTTCGAGAGAAGCTGGGGACCCTGGGTaGCCTGGGCTCAATCCAAGCCCTTTCCTTTGCTCGGAGAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: LQHRYGGSREAGDPG*PGLNPSPFLCSEND Trigger: GTCATTCTCCGAGCAAAGGAAAGGGCTTGGATTGAGCCCAGGGCACCCAGGGTCCCCAGCTTCTCTCGAACCCCCATATCTGTGCTGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235157.2 ENSMUST00000236967.2 |
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| CDS-3UTR CAA 90 bp | TTGAGGCAGGTGAAGTCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTCGGGGGCTGCCTCTGTaGAGTCGGTGTGTCCTATCA | + |
|
Preference number: 5 (lower is better) Translates to: LRQVKSPLTMPQRLSGTFRGLPL*SRCVLS Trigger: TGATAGGACACACCGACTCAACAGAGGCAGCCCCCG...AAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGACTTCACCTGCCTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR CAA 90 bp | TTGAGGCAGGTGAAGTCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTTTCATCCCCACGAGCTaGAAGCCCCGCCTCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LRQVKSPLTMPQRLSGTFFIPTS*KPRLSK Trigger: CTTTGAGAGGCGGGGCTTCAAGCTCGTGGGGATGAA...AAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGACTTCACCTGCCTCAA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000025007.7 ENSMUST00000236547.2 |
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| CDS-3UTR CAA 90 bp | TCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATGCGGGGGCTGCCTCTGTaGAGTCGGTGTGTCCTATCA | + |
|
Preference number: 5 (lower is better) Translates to: SPLTMPQRLSGTFVHKDMRGLPL*SRCVLS Trigger: TGATAGGACACACCGACTCAACAGAGGCAGCCCCCG...CATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR CAA 90 bp | ACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATGGTCGGGGGCTGCCTCTGTaGAGTCGGTGTGTCCTATCA | + |
|
Preference number: 5 (lower is better) Translates to: TFDNAPKVVWHFCTQGHGRGLPL*SRCVLS Trigger: TGATAGGACACACCGACTCAACAGAGGCAGCCCCCG...ACCATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
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| CDS-3UTR CAA 90 bp | CCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATGGTCCAAAGACCCATTCCATaGCCCCTGCCCTGCTGTACC | + |
|
Preference number: 5 (lower is better) Translates to: PLTMPQRLSGTFVHKDMVQRPIP*PLPCCT Trigger: GGTACAGCAGGGCAGGGGCAATGGAATGGGTCTTTG...GACCATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000235157.2 ENSMUST00000236967.2 |
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| CDS-3UTR CAA 90 bp | TTGAGGCAGGTGAAGTCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGAGATATGGACCACATaGGGGCCTTCCCAGACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LRQVKSPLTMPQRLSGTFEIWTT*GPSQTC Trigger: GCAGGTCTGGGAAGGCCCCAATGTGGTCCATATCTC...AAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGACTTCACCTGCCTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000235157.2 ENSMUST00000236967.2 |
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| CDS-3UTR CAA 90 bp | GCAGGTGAAGTCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACAGAGATATGGACCACATaGGGGCCTTCCCAGACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AGEVTFDNAPKVVWHFCTEIWTT*GPSQTC Trigger: GCAGGTCTGGGAAGGCCCCAATGTGGTCCATATCTC...TGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGACTTCACCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000235157.2 ENSMUST00000236967.2 |
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| CDS-3UTR CAA 90 bp | TCACCTTTGACAATGCCCCAAAGGTTGTCTGGCACTTTTGTACACAAGGACATGTTCATCCCCACGAGCTaGAAGCCCCGCCTCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPLTMPQRLSGTFVHKDMFIPTS*KPRLSK Trigger: CTTTGAGAGGCGGGGCTTCAAGCTCGTGGGGATGAA...CATGTCCTTGTGTACAAAAGTGCCAGACAACCTTTGGGGCATTGTCAAAGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000025007.7 ENSMUST00000236547.2 |
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| CDS-3UTR CAA 90 bp | GTACACAAGGACATGGTCCAATATTGTATTGACTTAGGATACAAAAAGGCACATCAAAGACCCATTCCATaGCCCCTGCCCTGCTGTACC | + |
|
Preference number: 5 (lower is better) Translates to: VHKDMVQYCIDLGYKKAHQRPIP*PLPCCT Trigger: GGTACAGCAGGGCAGGGGCAATGGAATGGGTCTTTG...ATGTGCCTTTTTGTATCCTAAGTCAATACAATATTGGACCATGTCCTTGTGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235157.2 ENSMUST00000236967.2 |
||
| CDS CCA 72 bp | AGACCTGCAGCACAGATATGGGGGTTCGAGAGAAGCTaGGGACCCTGGGTGCCCTGGGCTCAATCCAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RPAAQIWGFERS*GPWVPWAQSKP Trigger: GGGCTTGGATTGAGCCCAGGGCACCCAGGGTCCCCAGCTTCTCTCGAACCCCCATATCTGTGCTGCAGGTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235157.2 ENSMUST00000236967.2 |
||
| CDS CCA 72 bp | CGGGGGCTGCCTCTGTTGAGTCGGTGTGTCCTATCATaGCCCTTGAGATATGGACCACATTGGGGCCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RGLPLLSRCVLS*PLRYGPHWGLP Trigger: GGGAAGGCCCCAATGTGGTCCATATCTCAAGGGCCATGATAGGACACACCGACTCAACAGAGGCAGCCCCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025007.7 ENSMUST00000235157.2 ENSMUST00000236128.2 ENSMUST00000236547.2 ENSMUST00000236967.2 |
||
| CDS GCA 72 bp | CTTGAGATATGGACCACATTGGGGCCTTCCCAGACCTaGAGCACAGATATGGGGGTTCGAGAGAAGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LEIWTTLGPSQT*STDMGVREKLG Trigger: CCCCAGCTTCTCTCGAACCCCCATATCTGTGCTGCAGGTCTGGGAAGGCCCCAATGTGGTCCATATCTCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235157.2 ENSMUST00000236967.2 |
||
| CDS GCA 72 bp | CCTGGGTGCCCTGGGCTCAATCCAAGCCCTTTCCTTTaGTCGGAGAATGACACCCCAAAGACCCATTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: PGCPGLNPSPFL*SENDTPKTHSI Trigger: AATGGAATGGGTCTTTGGGGTGTCATTCTCCGAGCAAAGGAAAGGGCTTGGATTGAGCCCAGGGCACCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235157.2 ENSMUST00000236967.2 |
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