Pregenerated sensors for NMD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027787Ensembl transcript IDs: ENSMUST00000029358.15, ENSMUST00000135266.8
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AATGAGTGCTCCAAGCTGACTCAGAAGGGGCTCACTCTGTGCCTGTaGGGACTCAGCAAGAATCTGCAAAGCTCTAAGGCCCTCCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: NECSKLTQKGLTLCL*GLSKNLQSSKALPR Trigger: TCTGGGGAGGGCCTTAGAGCTTTGCAGATTCTTGCTGAGTCCTCACAGGCACAGAGTGAGCCCCTTCTGAGTCAGCTTGGAGCACTCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR GCA 90 bp | GTGAGATGCCCAGACATGTCTTGCTTGAGTGTCTTCAAGTCAAAATaGTGTGGTCGAGGGTTAGCTGGGACTGCCATCTTATGGACCGTC | + |
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Preference number: 1 (lower is better) Translates to: VRCPDMSCLSVFKSK*CGRGLAGTAILWTV Trigger: GACGGTCCATAAGATGGCAGTCCCAGCTAACCCTCGACCACAGCATTTTGACTTGAAGACACTCAAGCAAGACATGTCTGGGCATCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR TCA 90 bp | AATTCCCAGCATCCACATGGTAGCTCAACCATCTGTAATGGGGTCTaGTACCCTCTTCAGGTGTATCTGAAGACAGCAACAGTGTACTCA | + |
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Preference number: 1 (lower is better) Translates to: NSQHPHGSSTICNGV*YPLQVYLKTATVYS Trigger: TGAGTACACTGTTGCTGTCTTCAGATACACCTGAAGAGGGTATCAGACCCCATTACAGATGGTTGAGCTACCATGTGGATGCTGGGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR CCA 90 bp | CTTGTGCATTTGAATAAAATTAGCTTCCCAACCCACTGGCAGTCCTaGAGCAGCATTCAGAGTACCATGGGACTCACAGAAATGGTAGAC | + |
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Preference number: 1 (lower is better) Translates to: LVHLNKISFPTHWQS*SSIQSTMGLTEMVD Trigger: GTCTACCATTTCTGTGAGTCCCATGGTACTCTGAATGCTGCTCCAGGACTGCCAGTGGGTTGGGAAGCTAATTTTATTCAAATGCACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR TCA 90 bp | GCCAGTGGTAAAGAAATGAGAACTTGCTATGGTCGTGCTCATCTCTaGAGAACAGCCATCCCCATTATTCTATCACCAGGACAGAATATG | + |
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Preference number: 1 (lower is better) Translates to: ASGKEMRTCYGRAHL*RTAIPIILSPGQNM Trigger: CATATTCTGTCCTGGTGATAGAATAATGGGGATGGCTGTTCTTCAGAGATGAGCACGACCATAGCAAGTTCTCATTTCTTTACCACTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR CCA 90 bp | CAAACATATCCTATAATGAACCATGCCTGGCATCATCTGGACTCATaGAAGCACATGCATCCTATGATAATGTGCCATGTCTGGCATCAC | + |
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Preference number: 1 (lower is better) Translates to: QTYPIMNHAWHHLDS*KHMHPMIMCHVWHH Trigger: GTGATGCCAGACATGGCACATTATCATAGGATGCATGTGCTTCCATGAGTCCAGATGATGCCAGGCATGGTTCATTATAGGATATGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR TCA 90 bp | GATACTGTCTTAAAAATCTCACTAAACCAGCCAGTGGTAAAGAAATaGGAACTTGCTATGGTCGTGCTCATCTCTGAAGAACAGCCATCC | + |
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Preference number: 1 (lower is better) Translates to: DTVLKISLNQPVVKK*ELAMVVLISEEQPS Trigger: GGATGGCTGTTCTTCAGAGATGAGCACGACCATAGCAAGTTCTCATTTCTTTACCACTGGCTGGTTTAGTGAGATTTTTAAGACAGTATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR TCA 90 bp | ATGCTAAGCAAGAATTCTCGCAAACTCCTAGCCCCTCTCTTGAAGTaGTCCCATTTAAAACTAGTAAGATGGAAAGAGAATGCCACCAAG | + |
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Preference number: 1 (lower is better) Translates to: MLSKNSRKLLAPLLK*SHLKLVRWKENATK Trigger: CTTGGTGGCATTCTCTTTCCATCTTACTAGTTTTAAATGGGATCACTTCAAGAGAGGGGCTAGGAGTTTGCGAGAATTCTTGCTTAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR CCA 90 bp | AAGAGCTTGTTCTCAGAACAGGAAGCCAGAAAAGAATGCAAAGTTTaGGAGCATCTGGACTCATGGCAGCAAACATATCCTATAATGAAC | + |
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Preference number: 1 (lower is better) Translates to: KSLFSEQEARKECKV*EHLDSWQQTYPIMN Trigger: GTTCATTATAGGATATGTTTGCTGCCATGAGTCCAGATGCTCCCAAACTTTGCATTCTTTTCTGGCTTCCTGTTCTGAGAACAAGCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR TCA 90 bp | AAAAGCAACTCTCCCTCAACTTCTTCCTTGTTCACCAGACTTCTCTaGCTACAAAACAATAGCATTCAAGTGTATATCCATTACATACAA | + |
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Preference number: 1 (lower is better) Translates to: KSNSPSTSSLFTRLL*LQNNSIQVYIHYIQ Trigger: TTGTATGTAATGGATATACACTTGAATGCTATTGTTTTGTAGTCAGAGAAGTCTGGTGAACAAGGAAGAAGTTGAGGGAGAGTTGCTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR GCA 90 bp | CTCTTTCTTAAAGAAAGAGCTGGTCCAGATCAAACACATATGAGATaGCAAAGTAACACAGAATCTTACATTCAAGTTTTCTGTAAAGGA | + |
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Preference number: 1 (lower is better) Translates to: LFLKERAGPDQTHMR*QSNTESYIQVFCKG Trigger: TCCTTTACAGAAAACTTGAATGTAAGATTCTGTGTTACTTTGGCATCTCATATGTGTTTGATCTGGACCAGCTCTTTCTTTAAGAAAGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR GCA 90 bp | TGCCATCTTATGGACCGTCAAGGAGCTACAGAGAGCTTCAGAAATTGGGTTAGGGACTCAGCAAGAATCTaGAAAGCTCTAAGGCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: CHLMDRQGATESFRNWVRDSARI*KALRPS Trigger: GGAGGGCCTTAGAGCTTTGCAGATTCTTGCTGAGTC...CCTAACCCAATTTCTGAAGCTCTCTGTAGCTCCTTGACGGTCCATAAGATGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR TCA 90 bp | AGAACAGGAAGCCAGAAAAGAATGCAAAGTTTGGGAGCATCTGGACTCATGGCAATGTCTGGCATCACTTaGGTGGCACTGCCAAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: RTGSQKRMQSLGASGLMAMSGIT*VALPKG Trigger: TCCTTTTGGCAGTGCCACTCAAGTGATGCCAGACAT...TGCCATGAGTCCAGATGCTCCCAAACTTTGCATTCTTTTCTGGCTTCCTGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR CCA 90 bp | AGTATTAACCTGATGCTGCTAAGCATCTTAGCTGAAAAGCAACTCTCCCTCAACAGCTTCCCAACCCACTaGCAGTCCTGGAGCAGCATT | + |
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Preference number: 2 (lower is better) Translates to: SINLMLLSILAEKQLSLNSFPTH*QSWSSI Trigger: AATGCTGCTCCAGGACTGCCAGTGGGTTGGGAAGCT...GTTGAGGGAGAGTTGCTTTTCAGCTAAGATGCTTAGCAGCATCAGGTTAATACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR CCA 90 bp | AGAACAGGAAGCCAGAAAAGAATGCAAAGTTTGGGAGCATCTGGACTCATGGCAATGCCTGGCATCATCTaGACTCATGGAAGCACATGC | + |
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Preference number: 2 (lower is better) Translates to: RTGSQKRMQSLGASGLMAMPGII*THGSTC Trigger: GCATGTGCTTCCATGAGTCCAGATGATGCCAGGCAT...TGCCATGAGTCCAGATGCTCCCAAACTTTGCATTCTTTTCTGGCTTCCTGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR GCA 90 bp | TGCCATCTTATGGACCGTCAAGGAGCTACAGAGAGCTTCAGAAATTGGGTTAGGGTCCTCAGCATCACATaGACACTCAATAAAGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: CHLMDRQGATESFRNWVRVLSIT*TLNKGH Trigger: GTGACCTTTATTGAGTGTGCATGTGATGCTGAGGAC...CCTAACCCAATTTCTGAAGCTCTCTGTAGCTCCTTGACGGTCCATAAGATGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR TCA 90 bp | AGGCAAGAATATGATCTAGGTCCTGACCAAAGGAAATCCAAAGAGAACCCCAACAAGAAGCCATATATTTaGAGGAGCATGGGGAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: RQEYDLGPDQRKSKENPNKKPYI*RSMGRG Trigger: ACCCCTCCCCATGCTCCTTCAAATATATGGCTTCTT...GTTGGGGTTCTCTTTGGATTTCCTTTGGTCAGGACCTAGATCATATTCTTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR CCA 90 bp | AGGCAAGAATATGATCTAGGTCCTGACCAAAGGAAATCCAAAGAGAACCCCAACCTTTTATTTGGTGGGTaGTGGTGGAGCAGAGTGACA | + |
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Preference number: 2 (lower is better) Translates to: RQEYDLGPDQRKSKENPNLLFGG*WWSRVT Trigger: TGTCACTCTGCTCCACCACCACCCACCAAATAAAAG...GTTGGGGTTCTCTTTGGATTTCCTTTGGTCAGGACCTAGATCATATTCTTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR CCA 90 bp | AGGCAAGAATATGATCTAGGTCCTGACCAAAGGAAATCCAAAGAGAACCCCAACTCCTGGACTACTTGCTaGAAGTACATAGCCCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: RQEYDLGPDQRKSKENPNSWTTC*KYIALN Trigger: GTTCAGGGCTATGTACTTCCAGCAAGTAGTCCAGGA...GTTGGGGTTCTCTTTGGATTTCCTTTGGTCAGGACCTAGATCATATTCTTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR TCA 90 bp | AGAACAGGAAGCCAGAAAAGAATGCAAAGTTTGGGAGCATCTGGACTCATGGCATGCCACCAAGAAAAATaGTTCATCTGCCAATTCTGG | + |
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Preference number: 2 (lower is better) Translates to: RTGSQKRMQSLGASGLMACHQEK*FICQFW Trigger: CCAGAATTGGCAGATGAATCATTTTTCTTGGTGGCA...TGCCATGAGTCCAGATGCTCCCAAACTTTGCATTCTTTTCTGGCTTCCTGTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR TCA 90 bp | AGAACAGGAAGCCAGAAAAGAATGCAAAGTTTGGGAGCATCTGGACTCATGGCACCATGTAGCTATCCTTaGACACATATAACACATGGG | + |
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Preference number: 2 (lower is better) Translates to: RTGSQKRMQSLGASGLMAPCSYP*THITHG Trigger: CCCATGTGTTATATGTGTTCAAGGATAGCTACATGG...TGCCATGAGTCCAGATGCTCCCAAACTTTGCATTCTTTTCTGGCTTCCTGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR CCA 90 bp | TGCCATCTTATGGACCGTCAAGGAGCTACAGAGAGCTTCAGAAATTGGGTTAGGCATGGGAAAGTTTGGTaGAAAGGGAGAAATGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: CHLMDRQGATESFRNWVRHGKVW*KGRNVL Trigger: TAGAACATTTCTCCCTTTCCACCAAACTTTCCCATG...CCTAACCCAATTTCTGAAGCTCTCTGTAGCTCCTTGACGGTCCATAAGATGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR TCA 90 bp | AGAAATGAGAACTTGCTATGGTCGTGCTCATCTCTGAAGAACAGCCATCCCCATATGGCAAAAACTTACTaGAAAGTCTTCCTTCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: RNENLLWSCSSLKNSHPHMAKTY*KVFLPN Trigger: GTTGGGAAGGAAGACTTTTCAGTAAGTTTTTGCCAT...ATGGGGATGGCTGTTCTTCAGAGATGAGCACGACCATAGCAAGTTCTCATTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR CCA 90 bp | AGAACAGGAAGCCAGAAAAGAATGCAAAGTTTGGGAGCATCTGGACTCATGGCATTTAAAAATGTCCACTaGGCTAGCATGCCAAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: RTGSQKRMQSLGASGLMAFKNVH*ASMPRK Trigger: CTTTCTTGGCATGCTAGCCCAGTGGACATTTTTAAA...TGCCATGAGTCCAGATGCTCCCAAACTTTGCATTCTTTTCTGGCTTCCTGTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR CCA 90 bp | TGCCATCTTATGGACCGTCAAGGAGCTACAGAGAGCTTCAGAAATTGGGTTAGGAGAGCAAAAAGACAATaGCAAGAGAACAGACTAACT | + |
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Preference number: 2 (lower is better) Translates to: CHLMDRQGATESFRNWVRRAKRQ*QENRLT Trigger: AGTTAGTCTGTTCTCTTGCCATTGTCTTTTTGCTCT...CCTAACCCAATTTCTGAAGCTCTCTGTAGCTCCTTGACGGTCCATAAGATGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR CAA 90 bp | GAAGAGCTTGTTCTCAGAACAGGAAGCCAGAAAAGAATGCAAAGTTaGGGAGCATCTGGACTCATGGCAGCAAACATATCCTATAATGAA | + |
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Preference number: 2 (lower is better) Translates to: EELVLRTGSQKRMQS*GASGLMAANISYNE Trigger: TTCATTATAGGATATGTTTGCTGCCATGAGTCCAGATGCTCCCAAACTTTGCATTCTTTTCTGGCTTCCTGTTCTGAGAACAAGCTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR TCA 90 bp | AGTATTAACCTGATGCTGCTAAGCATCTTAGCTGAAAAGCAACTCTCCCTCAACATAAAACTGCACATGTaGGGTGGCCAAAATATCAGT | + |
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Preference number: 2 (lower is better) Translates to: SINLMLLSILAEKQLSLNIKLHM*GGQNIS Trigger: ACTGATATTTTGGCCACCTCACATGTGCAGTTTTAT...GTTGAGGGAGAGTTGCTTTTCAGCTAAGATGCTTAGCAGCATCAGGTTAATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR GCA 90 bp | AGCGTAACCATAATGGAATCCTCCAGAAACAGCAAAGCTTACATGTTTATGTGGGAAGCCAGAAAAGAATaGAAAGTTTGGGAGCATCTG | + |
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Preference number: 2 (lower is better) Translates to: SVTIMESSRNSKAYMFMWEARKE*KVWEHL Trigger: CAGATGCTCCCAAACTTTGCATTCTTTTCTGGCTTC...CCACATAAACATGTAAGCTTTGCTGTTTCTGGAGGATTCCATTATGGTTACGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR CCA 90 bp | AGTATTAACCTGATGCTGCTAAGCATCTTAGCTGAAAAGCAACTCTCCCTCAACGGACTACATGATGTCTaGGCCTTTATTCTTAATTGC | + |
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Preference number: 2 (lower is better) Translates to: SINLMLLSILAEKQLSLNGLHDV*AFILNC Trigger: GCAATTAAGAATAAAGGCCCAGACATCATGTAGTCC...GTTGAGGGAGAGTTGCTTTTCAGCTAAGATGCTTAGCAGCATCAGGTTAATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR CCA 90 bp | AGCGTAACCATAATGGAATCCTCCAGAAACAGCAAAGCTTACATGTTTATGTGGGAGCATCTGGACTCATaGCAGCAAACATATCCTATA | + |
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Preference number: 2 (lower is better) Translates to: SVTIMESSRNSKAYMFMWEHLDS*QQTYPI Trigger: TATAGGATATGTTTGCTGCCATGAGTCCAGATGCTC...CCACATAAACATGTAAGCTTTGCTGTTTCTGGAGGATTCCATTATGGTTACGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR GCA 90 bp | GCAGTTTTAAGATCAAAAGCTACAAACAAATGTACTCTGACAGACGAATGGGTACATCCTATGATAATGTaGCATGTCTGGCATCACTTG | + |
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Preference number: 2 (lower is better) Translates to: AVLRSKATNKCTLTDEWVHPMIM*HVWHHL Trigger: CAAGTGATGCCAGACATGGCACATTATCATAGGATG...TACCCATTCGTCTGTCAGAGTACATTTGTTTGTAGCTTTTGATCTTAAAACTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR CCA 90 bp | GCAGTTTTAAGATCAAAAGCTACAAACAAATGTACTCTGACAGACGAATGGGTAAAAGAATGCAAAGTTTaGGAGCATCTGGACTCATGG | + |
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Preference number: 2 (lower is better) Translates to: AVLRSKATNKCTLTDEWVKECKV*EHLDSW Trigger: CCATGAGTCCAGATGCTCCCAAACTTTGCATTCTTT...TACCCATTCGTCTGTCAGAGTACATTTGTTTGTAGCTTTTGATCTTAAAACTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR CCA 90 bp | AGCGTAACCATAATGGAATCCTCCAGAAACAGCAAAGCTTACATGTTTATGTGGACAAACAATTCTCCATaGAAGAGCTTGTTCTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: SVTIMESSRNSKAYMFMWTNNSP*KSLFSE Trigger: TTCTGAGAACAAGCTCTTCCATGGAGAATTGTTTGT...CCACATAAACATGTAAGCTTTGCTGTTTCTGGAGGATTCCATTATGGTTACGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR TCA 90 bp | GCAGTTTTAAGATCAAAAGCTACAAACAAATGTACTCTGACAGACGAATGGGTACAAAACTTTGGTAGTTaGATCTTAAGACCTGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: AVLRSKATNKCTLTDEWVQNFGS*ILRPEH Trigger: GTGCTCAGGTCTTAAGATTCAACTACCAAAGTTTTG...TACCCATTCGTCTGTCAGAGTACATTTGTTTGTAGCTTTTGATCTTAAAACTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR GCA 90 bp | GCAGTTTTAAGATCAAAAGCTACAAACAAATGTACTCTGACAGACGAATGGGTATACAATAAAGGTTTTTaGCAACTTCCTGAGGCCACA | + |
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Preference number: 2 (lower is better) Translates to: AVLRSKATNKCTLTDEWVYNKGF*QLPEAT Trigger: TGTGGCCTCAGGAAGTTGGCAAAAACCTTTATTGTA...TACCCATTCGTCTGTCAGAGTACATTTGTTTGTAGCTTTTGATCTTAAAACTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR GCA 90 bp | GCAGTTTTAAGATCAAAAGCTACAAACAAATGTACTCTGACAGACGAATGGGTAAAAGAAATGAGAACTTaGTATGGTCGTGCTCATCTC | + |
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Preference number: 2 (lower is better) Translates to: AVLRSKATNKCTLTDEWVKEMRT*YGRAHL Trigger: GAGATGAGCACGACCATAGCAAGTTCTCATTTCTTT...TACCCATTCGTCTGTCAGAGTACATTTGTTTGTAGCTTTTGATCTTAAAACTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR GCA 90 bp | AGCGTAACCATAATGGAATCCTCCAGAAACAGCAAAGCTTACATGTTTATGTGGTATGTGGTCCAACTATaGAGTGTAGTATCAGAAATA | + |
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Preference number: 2 (lower is better) Translates to: SVTIMESSRNSKAYMFMWYVVQL*SVVSEI Trigger: TATTTCTGATACTACACTGCATAGTTGGACCACATA...CCACATAAACATGTAAGCTTTGCTGTTTCTGGAGGATTCCATTATGGTTACGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR CCA 90 bp | AATTGTCTGATTCATTGTCTGAAACTGAACCTTCATTTTCCTACCCCAGGATATACTGCACATGTGAGGTaGCCAAAATATCAGTTACAA | + |
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Preference number: 2 (lower is better) Translates to: NCLIHCLKLNLHFPTPGYTAHVR*PKYQLQ Trigger: TTGTAACTGATATTTTGGCCACCTCACATGTGCAGT...ATATCCTGGGGTAGGAAAATGAAGGTTCAGTTTCAGACAATGAATCAGACAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR CCA 90 bp | AAAACTTCACTTTCAAATTGTTTACATCCAGGCCAACACTCTTCTTTCAGACCAATAGAACACCAAATATaGCACAGGCCTTCAGTTAAA | + |
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Preference number: 2 (lower is better) Translates to: KTSLSNCLHPGQHSSFRPIEHQI*HRPSVK Trigger: TTTAACTGAAGGCCTGTGCCATATTTGGTGTTCTAT...TGGTCTGAAAGAAGAGTGTTGGCCTGGATGTAAACAATTTGAAAGTGAAGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR-3UTR CCA 90 bp | GCAGTTTTAAGATCAAAAGCTACAAACAAATGTACTCTGACAGACGAATGGGTACAGTATTCTAGTGATTaGGTGAAAGTTTTGAATCAG | + |
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Preference number: 2 (lower is better) Translates to: AVLRSKATNKCTLTDEWVQYSSD*VKVLNQ Trigger: CTGATTCAAAACTTTCACCCAATCACTAGAATACTG...TACCCATTCGTCTGTCAGAGTACATTTGTTTGTAGCTTTTGATCTTAAAACTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR GCA 72 bp | GGCTCACTCTGTGCCTGTGAGGACTCAGCAAGAATCTaGAAAGCTCTAAGGCCCTCCCCAGAGCGTAACCAT | + |
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Preference number: 3 (lower is better) Translates to: GSLCACEDSARI*KALRPSPERNH Trigger: ATGGTTACGCTCTGGGGAGGGCCTTAGAGCTTTGCAGATTCTTGCTGAGTCCTCACAGGCACAGAGTGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR TCA 72 bp | TCCAAGCTGACTCAGAAGGGGCTCACTCTGTGCCTGTaGGGACTCAGCAAGAATCTGCAAAGCTCTAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: SKLTQKGLTLCL*GLSKNLQSSKA Trigger: GGCCTTAGAGCTTTGCAGATTCTTGCTGAGTCCTCACAGGCACAGAGTGAGCCCCTTCTGAGTCAGCTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR CCA 72 bp | ATGCCACTGCTAAGAAGGCACCAGCCTTCTTTTATTTaGTGGGTGGTGGTGGAGCAGAGTGACATGCTGGGT | + |
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Preference number: 3 (lower is better) Translates to: MPLLRRHQPSFI*WVVVEQSDMLG Trigger: ACCCAGCATGTCACTCTGCTCCACCACCACCCACCAAATAAAAGAAGGCTGGTGCCTTCTTAGCAGTGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR CCA 72 bp | TGCTGTGGTCGAGGGTTAGCTGGGACTGCCATCTTATaGACCGTCAAGGAGCTACAGAGAGCTTCAGAAATT | + |
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Preference number: 3 (lower is better) Translates to: CCGRGLAGTAIL*TVKELQRASEI Trigger: AATTTCTGAAGCTCTCTGTAGCTCCTTGACGGTCCATAAGATGGCAGTCCCAGCTAACCCTCGACCACAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR TCA 72 bp | TTCAACATGTGGGTGCCAGGGATTGAATTGAGGACATaGAGCTTGGTGCCACTGAGTCATCATAGCAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: FNMWVPGIELRT*SLVPLSHHSSP Trigger: AGGGCTGCTATGATGACTCAGTGGCACCAAGCTTCATGTCCTCAATTCAATCCCTGGCACCCACATGTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR CCA 72 bp | ATGGACCGTCAAGGAGCTACAGAGAGCTTCAGAAATTaGGTTAGGCCAGATCTGACCTTCTTGTACCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: MDRQGATESFRN*VRPDLTFLYQD Trigger: GTCCTGGTACAAGAAGGTCAGATCTGGCCTAACCCAATTTCTGAAGCTCTCTGTAGCTCCTTGACGGTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
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| 3UTR CCA 72 bp | TGTCTTCAAGTCAAAATGCTGTGGTCGAGGGTTAGCTaGGACTGCCATCTTATGGACCGTCAAGGAGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: CLQVKMLWSRVS*DCHLMDRQGAT Trigger: TGTAGCTCCTTGACGGTCCATAAGATGGCAGTCCCAGCTAACCCTCGACCACAGCATTTTGACTTGAAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR TCA 72 bp | GAGAGAGAGAGAGAGAGAAAAGGAACGACAAACAACTaGGTAAAGTTGGGAAAAGGAGACGTGGTGCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: ERERERKGTTNN*VKLGKGDVVLP Trigger: GGGGAGCACCACGTCTCCTTTTCCCAACTTTACTCAGTTGTTTGTCGTTCCTTTTCTCTCTCTCTCTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR GCA 72 bp | CTGGACTCATGGAAGCACATGCATCCTATGATAATGTaGCATGTCTGGCATCACTTGAGTGGCACTGCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LDSWKHMHPMIM*HVWHHLSGTAK Trigger: TTTGGCAGTGCCACTCAAGTGATGCCAGACATGGCACATTATCATAGGATGCATGTGCTTCCATGAGTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR GCA 72 bp | CCAGACATGTCTTGCTTGAGTGTCTTCAAGTCAAAATaGTGTGGTCGAGGGTTAGCTGGGACTGCCATCTTA | + |
|
Preference number: 3 (lower is better) Translates to: PDMSCLSVFKSK*CGRGLAGTAIL Trigger: TAAGATGGCAGTCCCAGCTAACCCTCGACCACAGCATTTTGACTTGAAGACACTCAAGCAAGACATGTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR CCA 72 bp | AGGGCTGAAAATGTAGCTCAATCCTGGACTACTTGCTaGAAGTACATAGCCCTGAACCAGTCCTCAGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: RAENVAQSWTTC*KYIALNQSSAS Trigger: TGATGCTGAGGACTGGTTCAGGGCTATGTACTTCCAGCAAGTAGTCCAGGATTGAGCTACATTTTCAGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR CCA 72 bp | CATGTCTTGCTTGAGTGTCTTCAAGTCAAAATGCTGTaGTCGAGGGTTAGCTGGGACTGCCATCTTATGGAC | + |
|
Preference number: 3 (lower is better) Translates to: HVLLECLQVKML*SRVSWDCHLMD Trigger: GTCCATAAGATGGCAGTCCCAGCTAACCCTCGACCACAGCATTTTGACTTGAAGACACTCAAGCAAGACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR TCA 72 bp | CATCCACATGGTAGCTCAACCATCTGTAATGGGGTCTaGTACCCTCTTCAGGTGTATCTGAAGACAGCAACA | + |
|
Preference number: 3 (lower is better) Translates to: HPHGSSTICNGV*YPLQVYLKTAT Trigger: TGTTGCTGTCTTCAGATACACCTGAAGAGGGTATCAGACCCCATTACAGATGGTTGAGCTACCATGTGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR TCA 72 bp | TCAGGGCTAATTTTTCAACATGTGGGTGCCAGGGATTaGATTGAGGACATGAAGCTTGGTGCCACTGAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SGLIFQHVGARD*IEDMKLGATES Trigger: TGACTCAGTGGCACCAAGCTTCATGTCCTCAATTCAATCCCTGGCACCCACATGTTGAAAAATTAGCCCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR GCA 72 bp | CTCATCAACTGGGGATGTGCACAATCAATTGTGCAGTaGCAAACAGCCAGCCCTGAAAACATACATACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LINWGCAQSIVQ*QTASPENIHTR Trigger: CCTTGTATGTATGTTTTCAGGGCTGGCTGTTTGGCACTGCACAATTGATTGTGCACATCCCCAGTTGATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR GCA 72 bp | TCAGGCATGTTAGACAGGTGCTATAGTACTGAGCTATaGCCTATGATTTCTCTATCTGCACCACAAGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SGMLDRCYSTEL*PMISLSAPQAQ Trigger: CTGGGCTTGTGGTGCAGATAGAGAAATCATAGGGCATAGCTCAGTACTATAGCACCTGTCTAACATGCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR CCA 72 bp | TTGAATAAAATTAGCTTCCCAACCCACTGGCAGTCCTaGAGCAGCATTCAGAGTACCATGGGACTCACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LNKISFPTHWQS*SSIQSTMGLTE Trigger: TTCTGTGAGTCCCATGGTACTCTGAATGCTGCTCCAGGACTGCCAGTGGGTTGGGAAGCTAATTTTATTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR-3UTR CAA 90 bp | AGGCAAGAATATGATCTAGGTCCTGACCAAAGGAAATCCAAAGAGAACCCCAACAATGGCACAGGCACTTaGGTAAAGCTTGGCAGATTC | + |
|
Preference number: 3 (lower is better) Translates to: RQEYDLGPDQRKSKENPNNGTGT*VKLGRF Trigger: GAATCTGCCAAGCTTTACCAAAGTGCCTGTGCCATT...GTTGGGGTTCTCTTTGGATTTCCTTTGGTCAGGACCTAGATCATATTCTTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR TCA 72 bp | TCCTGGAACTGGAAGTGCAGGGTTGTTGAAGAGTTGTaGACTACTATGTGGGTTTTGGGAATAGAACCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SWNWKCRVVEEL*TTMWVLGIEPW Trigger: CCAAGGTTCTATTCCCAAAACCCACATAGTAGTTCACAACTCTTCAACAACCCTGCACTTCCAGTTCCAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR-3UTR CAA 90 bp | AGCGTAACCATAATGGAATCCTCCAGAAACAGCAAAGCTTACATGTTTATGTGGGAGCAAGAAATAGGGTaGGAGAGATGGCTCAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SVTIMESSRNSKAYMFMWEQEIG*ERWLRR Trigger: CCTTCTGAGCCATCTCTCCAACCCTATTTCTTGCTC...CCACATAAACATGTAAGCTTTGCTGTTTCTGGAGGATTCCATTATGGTTACGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR TCA 72 bp | TGCACAATCAATTGTGCAGTGCCAAACAGCCAGCCCTaGAAACATACATACAAGGACAGAGCAGGGTATATA | + |
|
Preference number: 3 (lower is better) Translates to: CTINCAVPNSQP*KHTYKDRAGYI Trigger: TATATACCCTGCTCTGTCCTTGTATGTATGTTTTCAGGGCTGGCTGTTTGGCACTGCACAATTGATTGTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR TCA 72 bp | ATCAAGGCCTGCTTTCCTGGAACTGGTCAAATTATTTaGACATGTGACAAAAGGCCAGGCATGGTGGTACAT | + |
|
Preference number: 3 (lower is better) Translates to: IKACFPGTGQII*TCDKRPGMVVH Trigger: ATGTACCACCATGCCTGGCCTTTTGTCACATGTTCAAATAATTTGACCAGTTCCAGGAAAGCAGGCCTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR TCA 72 bp | CTACAGAGAGCTTCAGAAATTGGGTTAGGCCAGATCTaGCCTTCTTGTACCAGGACATACTGGAATATGACT | + |
|
Preference number: 3 (lower is better) Translates to: LQRASEIGLGQI*PSCTRTYWNMT Trigger: AGTCATATTCCAGTATGTCCTGGTACAAGAAGGTCAGATCTGGCCTAACCCAATTTCTGAAGCTCTCTGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR CCA 72 bp | TTCTCAGAACAGGAAGCCAGAAAAGAATGCAAAGTTTaGGAGCATCTGGACTCATGGCAGCAAACATATCCT | + |
|
Preference number: 3 (lower is better) Translates to: FSEQEARKECKV*EHLDSWQQTYP Trigger: AGGATATGTTTGCTGCCATGAGTCCAGATGCTCCCAAACTTTGCATTCTTTTCTGGCTTCCTGTTCTGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR TCA 72 bp | AAAGAAATGAGAACTTGCTATGGTCGTGCTCATCTCTaGAGAACAGCCATCCCCATTATTCTATCACCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: KEMRTCYGRAHL*RTAIPIILSPG Trigger: TCCTGGTGATAGAATAATGGGGATGGCTGTTCTTCAGAGATGAGCACGACCATAGCAAGTTCTCATTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR TCA 72 bp | AGAGCAAAAAGACAATGGCAAGAGAACAGACTAACTTaGAGGGGCATCCACTGCTCAGTTCAGCATGAAATT | + |
|
Preference number: 3 (lower is better) Translates to: RAKRQWQENRLT*RGIHCSVQHEI Trigger: AATTTCATGCTGAACTGAGCAGTGGATGCCCCTTCAAGTTAGTCTGTTCTCTTGCCATTGTCTTTTTGCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR CCA 72 bp | AGAAAAGAATGCAAAGTTTGGGAGCATCTGGACTCATaGCAGCAAACATATCCTATAATGAACCATGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RKECKVWEHLDS*QQTYPIMNHAW Trigger: CCAGGCATGGTTCATTATAGGATATGTTTGCTGCCATGAGTCCAGATGCTCCCAAACTTTGCATTCTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR TCA 72 bp | TCTGTAATGGGGTCTGATACCCTCTTCAGGTGTATCTaGAGACAGCAACAGTGTACTCACATACATAAAATT | + |
|
Preference number: 3 (lower is better) Translates to: SVMGSDTLFRCI*RQQQCTHIHKI Trigger: AATTTTATGTATGTGAGTACACTGTTGCTGTCTTCAGATACACCTGAAGAGGGTATCAGACCCCATTACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR TCA 72 bp | AAGATATACCCCAGAATCCATACCGAGTTAAATGATTaGATAGTACACAGGACAAGTCTCCCATGTGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: KIYPRIHTELND*IVHRTSLPCAS Trigger: TGATGCACATGGGAGACTTGTCCTGTGTACTATTCAATCATTTAACTCGGTATGGATTCTGGGGTATATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR TCA 72 bp | AAGAATTCTCGCAAACTCCTAGCCCCTCTCTTGAAGTaGTCCCATTTAAAACTAGTAAGATGGAAAGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: KNSRKLLAPLLK*SHLKLVRWKEN Trigger: ATTCTCTTTCCATCTTACTAGTTTTAAATGGGATCACTTCAAGAGAGGGGCTAGGAGTTTGCGAGAATTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR-3UTR CAA 90 bp | GCAGTTTTAAGATCAAAAGCTACAAACAAATGTACTCTGACAGACGAATGGGTAAACTTCACTTTCAAATaGTTTACATCCAGGCCAACA | + |
|
Preference number: 3 (lower is better) Translates to: AVLRSKATNKCTLTDEWVNFTFK*FTSRPT Trigger: TGTTGGCCTGGATGTAAACAATTTGAAAGTGAAGTT...TACCCATTCGTCTGTCAGAGTACATTTGTTTGTAGCTTTTGATCTTAAAACTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR TCA 72 bp | TTCTTAAAGAAAGAGCTGGTCCAGATCAAACACATATaGGATGCCAAAGTAACACAGAATCTTACATTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: FLKKELVQIKHI*DAKVTQNLTFK Trigger: CTTGAATGTAAGATTCTGTGTTACTTTGGCATCTCATATGTGTTTGATCTGGACCAGCTCTTTCTTTAAGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR GCA 72 bp | ACAGAATCTTACATTCAAGTTTTCTGTAAAGGACTTTaGAGAGTCAAATGTCAAGACCTCAGTATTCTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TESYIQVFCKGL*RVKCQDLSILV Trigger: CACTAGAATACTGAGGTCTTGACATTTGACTCTGCAAAGTCCTTTACAGAAAACTTGAATGTAAGATTCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR GCA 72 bp | GTATATGCACAGTCAAGTAGATTCTTGCATACCTATTaGCTAGATAATGGTTTATTGAACTGCTTTCCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: VYAQSSRFLHTY*LDNGLLNCFPV Trigger: TACTGGAAAGCAGTTCAATAAACCATTATCTAGGCAATAGGTATGCAAGAATCTACTTGACTGTGCATATAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR CAA 72 bp | GGAGTGTGTAACCCAATGCGGGTAAGGGGGCCTAGGTaGCAAGGTGCAGTCTGTGTGTACAGACGTGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: GVCNPMRVRGPR*QGAVCVYRRVY Trigger: ATATACACGTCTGTACACACAGACTGCACCTTGCAACCTAGGCCCCCTTACCCGCATTGGGTTACACACTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| CDS-3UTR CCA 90 bp | TGCCATCTTATGGACCGTCAAGGAGCTACAGAGAGCTTCAGAAATTGGGTTAGGTACGGCGCTGGCGTTTaGTGCGGTCATAGCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CHLMDRQGATESFRNWVRYGAGV*CGHSSS Trigger: AGAAGAGCTATGACCGCACCAAACGCCAGCGCCGTA...CCTAACCCAATTTCTGAAGCTCTCTGTAGCTCCTTGACGGTCCATAAGATGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| CDS-3UTR CCA 90 bp | AGTATTAACCTGATGCTGCTAAGCATCTTAGCTGAAAAGCAACTCTCCCTCAACCCGGGCTGTGCTCAATaGACTCTGCCATGTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SINLMLLSILAEKQLSLNPGCAQ*TLPCTP Trigger: TGGAGTACATGGCAGAGTCCATTGAGCACAGCCCGG...GTTGAGGGAGAGTTGCTTTTCAGCTAAGATGCTTAGCAGCATCAGGTTAATACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR CAA 72 bp | GTTGTGAACTACTATGTGGGTTTTGGGAATAGAACCTaGGGGACCTCTGAAGAGCAGCCAATTCTCCTAACC | + |
|
Preference number: 4 (lower is better) Translates to: VVNYYVGFGNRT*GTSEEQPILLT Trigger: GGTTAGGAGAATTGGCTGCTCTTCAGAGGTCCCCAAGGTTCTATTCCCAAAACCCACATAGTAGTTCACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| CDS-3UTR TCA 90 bp | TGCCATCTTATGGACCGTCAAGGAGCTACAGAGAGCTTCAGAAATTGGGTTAGGTTGGAACACCTTGGCTaGTGTCAACTTTACTTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: CHLMDRQGATESFRNWVRLEHLG*CQLYFV Trigger: TACGAAGTAAAGTTGACATCAGCCAAGGTGTTCCAA...CCTAACCCAATTTCTGAAGCTCTCTGTAGCTCCTTGACGGTCCATAAGATGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR CAA 72 bp | GGTAACAGATCTCCTGGAACTGGAAGTGCAGGGTTGTaGAAGAGTTGTGAACTACTATGTGGGTTTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GNRSPGTGSAGL*KSCELLCGFWE Trigger: TTCCCAAAACCCACATAGTAGTTCACAACTCTTCAACAACCCTGCACTTCCAGTTCCAGGAGATCTGTTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| CDS-3UTR TCA 90 bp | AGAAATGAGAACTTGCTATGGTCGTGCTCATCTCTGAAGAACAGCCATCCCCATAACTCCACCATCTTCTaGGCATGCTGTTTTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RNENLLWSCSSLKNSHPHNSTIF*ACCFEE Trigger: TTCTTCAAAACAGCATGCTCAGAAGATGGTGGAGTT...ATGGGGATGGCTGTTCTTCAGAGATGAGCACGACCATAGCAAGTTCTCATTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| CDS-3UTR CCA 90 bp | TATTCTCTTAATAATGTGGAGGTAGGAATGTGGTTTGATTGTACAGTGCTTGTCCCGGGCTGTGCTCAATaGACTCTGCCATGTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YSLNNVEVGMWFDCTVLVPGCAQ*TLPCTP Trigger: TGGAGTACATGGCAGAGTCCATTGAGCACAGCCCGG...GACAAGCACTGTACAATCAAACCACATTCCTACCTCCACATTATTAAGAGAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135266.8 |
||
| CDS-3UTR CCA 90 bp | AGAAATGAGAACTTGCTATGGTCGTGCTCATCTCTGAAGAACAGCCATCCCCATAGGATTTGGACTAATTaGGACACCACATTCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RNENLLWSCSSLKNSHPHRIWTN*DTTFTA Trigger: TGCTGTGAATGTGGTGTCCCAATTAGTCCAAATCCT...ATGGGGATGGCTGTTCTTCAGAGATGAGCACGACCATAGCAAGTTCTCATTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| CDS-3UTR TCA 90 bp | AGGCAAGAATATGATCTAGGTCCTGACCAAAGGAAATCCAAAGAGAACCCCAACAAATCCAGACCATCATaGATCTCCTTGATACGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RQEYDLGPDQRKSKENPNKSRPS*ISLIRS Trigger: ACTGCGTATCAAGGAGATTCATGATGGTCTGGATTT...GTTGGGGTTCTCTTTGGATTTCCTTTGGTCAGGACCTAGATCATATTCTTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| CDS-3UTR CCA 90 bp | AGGCAAGAATATGATCTAGGTCCTGACCAAAGGAAATCCAAAGAGAACCCCAACGTTTGCAGAAAGAAATaGAGACCTGCTTTGGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: RQEYDLGPDQRKSKENPNVCRKK*RPALEH Trigger: GTGTTCCAAAGCAGGTCTCCATTTCTTTCTGCAAAC...GTTGGGGTTCTCTTTGGATTTCCTTTGGTCAGGACCTAGATCATATTCTTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| CDS-3UTR TCA 90 bp | AAAACTTCACTTTCAAATTGTTTACATCCAGGCCAACACTCTTCTTTCAGACCACAGGGAACTATACCCTaGAGAAACTCCACCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTSLSNCLHPGQHSSFRPQGTIP*RNSTIF Trigger: GAAGATGGTGGAGTTTCTTCAGGGTATAGTTCCCTG...TGGTCTGAAAGAAGAGTGTTGGCCTGGATGTAAACAATTTGAAAGTGAAGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| CDS-3UTR CCA 90 bp | AAAACTTCACTTTCAAATTGTTTACATCCAGGCCAACACTCTTCTTTCAGACCAAATGGAGACCTGCTTTaGAACACCTTGGCTGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: KTSLSNCLHPGQHSSFRPNGDLL*NTLADV Trigger: GACATCAGCCAAGGTGTTCCAAAGCAGGTCTCCATT...TGGTCTGAAAGAAGAGTGTTGGCCTGGATGTAAACAATTTGAAAGTGAAGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| CDS-3UTR CCA 90 bp | GCAGTTTTAAGATCAAAAGCTACAAACAAATGTACTCTGACAGACGAATGGGTATTAGCTTCCACTCTATaGCAGTCTCCACACATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AVLRSKATNKCTLTDEWVLASTL*QSPHIW Trigger: CCAAATGTGTGGAGACTGCCATAGAGTGGAAGCTAA...TACCCATTCGTCTGTCAGAGTACATTTGTTTGTAGCTTTTGATCTTAAAACTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR CAA 72 bp | CACTATAGGATGCAACAATCCCATTCTAAGCTGCTATaGTTTTTCTCATGCTGGGAAGCAAAGCAAGTATAC | + |
|
Preference number: 4 (lower is better) Translates to: HYRMQQSHSKLL*FFSCWEAKQVY Trigger: GTATACTTGCTTTGCTTCCCAGCATGAGAAAAACAATAGCAGCTTAGAATGGGATTGTTGCATCCTATAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| 3UTR CAA 72 bp | GAGAAACCCTTGTATACTGATAGAAAACTGCAGACCTaGAGCATACATATAAGTTTTGCCAGCCAACAGACA | + |
|
Preference number: 4 (lower is better) Translates to: EKPLYTDRKLQT*SIHISFASQQT Trigger: TGTCTGTTGGCTGGCAAAACTTATATGTATGCTCAAGGTCTGCAGTTTTCTATCAGTATACAAGGGTTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| CDS-3UTR TCA 90 bp | TATTCTCTTAATAATGTGGAGGTAGGAATGTGGTTTGATTGTACAGTGCTTGTCTTGGAACACCTTGGCTaGTGTCAACTTTACTTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: YSLNNVEVGMWFDCTVLVLEHLG*CQLYFV Trigger: TACGAAGTAAAGTTGACATCAGCCAAGGTGTTCCAA...GACAAGCACTGTACAATCAAACCACATTCCTACCTCCACATTATTAAGAGAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135266.8 |
||
| CDS-3UTR CCA 90 bp | TATTCTCTTAATAATGTGGAGGTAGGAATGTGGTTTGATTGTACAGTGCTTGTCAGGATTTGGACTAATTaGGACACCACATTCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YSLNNVEVGMWFDCTVLVRIWTN*DTTFTA Trigger: TGCTGTGAATGTGGTGTCCCAATTAGTCCAAATCCT...GACAAGCACTGTACAATCAAACCACATTCCTACCTCCACATTATTAAGAGAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135266.8 |
||
| CDS-3UTR CCA 90 bp | TATTCTCTTAATAATGTGGAGGTAGGAATGTGGTTTGATTGTACAGTGCTTGTCGTTTGCAGAAAGAAATaGAGACCTGCTTTGGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: YSLNNVEVGMWFDCTVLVVCRKK*RPALEH Trigger: GTGTTCCAAAGCAGGTCTCCATTTCTTTCTGCAAAC...GACAAGCACTGTACAATCAAACCACATTCCTACCTCCACATTATTAAGAGAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135266.8 |
||
| 3UTR CAA 72 bp | TGGGTAAAGGCTATCCAGGAAATCTCTGTGCTCTTCTaGGACCTTTCTACAAATCTAAAATTATGGGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: WVKAIQEISVLF*DLSTNLKLWEN Trigger: ATTTTCCCATAATTTTAGATTTGTAGAAAGGTCCAAGAAGAGCACAGAGATTTCCTGGATAGCCTTTACCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| CDS-3UTR CAA 90 bp | GCAGTTTTAAGATCAAAAGCTACAAACAAATGTACTCTGACAGACGAATGGGTACAAGGGTGTGCTTTTTaGATATCACTCCAGCCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: AVLRSKATNKCTLTDEWVQGCAF*ISLQPP Trigger: CGGGGGCTGGAGTGATATCAAAAAAGCACACCCTTG...TACCCATTCGTCTGTCAGAGTACATTTGTTTGTAGCTTTTGATCTTAAAACTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000029358.15 |
||
| CDS-3UTR CAA 90 bp | TATTCTCTTAATAATGTGGAGGTAGGAATGTGGTTTGATTGTACAGTGCTTGTCCTTGAAGCCTTGAGTTaGATTCTCACCACCACACAA | + |
|
Preference number: 5 (lower is better) Translates to: YSLNNVEVGMWFDCTVLVLEALS*ILTTTQ Trigger: TTGTGTGGTGGTGAGAATCAAACTCAAGGCTTCAAG...GACAAGCACTGTACAATCAAACCACATTCCTACCTCCACATTATTAAGAGAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135266.8 |
||