Pregenerated sensors for NMBR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019865Ensembl transcript IDs: ENSMUST00000020015.10, ENSMUST00000186382.7, ENSMUST00000190114.2, ENSMUST00000190751.2
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTTTGTATTGCTTTTCAAAGAAGTCATTCTTACTGCTGACGAGCTaGGGAGGTAGCTGGTGGACCTCTCGGGATAGGACTTCCGCCCAC | + |
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Preference number: 1 (lower is better) Translates to: SLYCFSKKSFLLLTS*GGSWWTSRDRTSAH Trigger: GTGGGCGGAAGTCCTATCCCGAGAGGTCCACCAGCTACCTCCTCAGCTCGTCAGCAGTAAGAATGACTTCTTTGAAAAGCAATACAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| 3UTR TCA 90 bp | CACCACATTCTTTGTATTGCTTTTCAAAGAAGTCATTCTTACTGCTaGCGAGCTGAGGAGGTAGCTGGTGGACCTCTCGGGATAGGACTT | + |
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Preference number: 1 (lower is better) Translates to: HHILCIAFQRSHSYC*RAEEVAGGPLGIGL Trigger: AAGTCCTATCCCGAGAGGTCCACCAGCTACCTCCTCAGCTCGTCAGCAGTAAGAATGACTTCTTTGAAAAGCAATACAAAGAATGTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| 3UTR GCA 90 bp | GCCAGGCGTTTCCGTGTCTCCATCTCATCAGCTCATCAAAGTGATTaGTCTAACAGCTTGGCCAGGACAATTATGGTTACCACATCATAT | + |
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Preference number: 1 (lower is better) Translates to: ARRFRVSISSAHQSD*SNSLARTIMVTTSY Trigger: ATATGATGTGGTAACCATAATTGTCCTGGCCAAGCTGTTAGAGCAATCACTTTGATGAGCTGATGAGATGGAGACACGGAAACGCCTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186382.7 |
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| 3UTR TCA 90 bp | TCGTATCCCATCACAGTGCTATTTCTTGCTTTGTGCTATGTCCATTaGGCAGGACAGAATTGGTCACCACATTCTTTGTATTGCTTTTCA | + |
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Preference number: 1 (lower is better) Translates to: SYPITVLFLALCYVH*AGQNWSPHSLYCFS Trigger: TGAAAAGCAATACAAAGAATGTGGTGACCAATTCTGTCCTGCTCAATGGACATAGCACAAAGCAAGAAATAGCACTGTGATGGGATACGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| 3UTR-3UTR CCA 90 bp | GTAGCTGGTGGACCTCTCGGGATAGGACTTCCGCCCACAACAGAGCTGGCTGTTATTGCTCTAACAGCTTaGCCAGGACAATTATGGTTA | + |
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Preference number: 2 (lower is better) Translates to: VAGGPLGIGLPPTTELAVIALTA*PGQLWL Trigger: TAACCATAATTGTCCTGGCCAAGCTGTTAGAGCAAT...AACAGCCAGCTCTGTTGTGGGCGGAAGTCCTATCCCGAGAGGTCCACCAGCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186382.7 |
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| 3UTR CAA 90 bp | CTATGTCCATTGAGCAGGACAGAATTGGTCACCACATTCTTTGTATaGCTTTTCAAAGAAGTCATTCTTACTGCTGACGAGCTGAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LCPLSRTELVTTFFV*LFKEVILTADELRR Trigger: CCTCCTCAGCTCGTCAGCAGTAAGAATGACTTCTTTGAAAAGCAATACAAAGAATGTGGTGACCAATTCTGTCCTGCTCAATGGACATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| 3UTR CAA 90 bp | ATCGTATCCCATCACAGTGCTATTTCTTGCTTTGTGCTATGTCCATaGAGCAGGACAGAATTGGTCACCACATTCTTTGTATTGCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: IVSHHSAISCFVLCP*SRTELVTTFFVLLF Trigger: GAAAAGCAATACAAAGAATGTGGTGACCAATTCTGTCCTGCTCAATGGACATAGCACAAAGCAAGAAATAGCACTGTGATGGGATACGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTTTGTGCTATGTCCATTGAGCAGGACAGAATTGGTCACCACATTCTTTGTATGGCCAGGACAATTATaGTTACCACATCATATTCTT | + |
|
Preference number: 2 (lower is better) Translates to: CFVLCPLSRTELVTTFFVWPGQL*LPHHIL Trigger: AAGAATATGATGTGGTAACCATAATTGTCCTGGCCA...TACAAAGAATGTGGTGACCAATTCTGTCCTGCTCAATGGACATAGCACAAAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186382.7 |
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| 3UTR CAA 90 bp | AGTGCTATTTCTTGCTTTGTGCTATGTCCATTGAGCAGGACAGAATaGGTCACCACATTCTTTGTATTGCTTTTCAAAGAAGTCATTCTT | + |
|
Preference number: 2 (lower is better) Translates to: SAISCFVLCPLSRTE*VTTFFVLLFKEVIL Trigger: AAGAATGACTTCTTTGAAAAGCAATACAAAGAATGTGGTGACCAATTCTGTCCTGCTCAATGGACATAGCACAAAGCAAGAAATAGCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| 3UTR TCA 72 bp | TGCTTTTCAAAGAAGTCATTCTTACTGCTGACGAGCTaGGGAGGTAGCTGGTGGACCTCTCGGGATAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: CFSKKSFLLLTS*GGSWWTSRDRT Trigger: AGTCCTATCCCGAGAGGTCCACCAGCTACCTCCTCAGCTCGTCAGCAGTAAGAATGACTTCTTTGAAAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| 3UTR-3UTR CAA 90 bp | GAGCTGGCTGTTGAAGTGCTTCCTAAAGCTTTCGCTGAGCAGGTAAAGAGCAAAGGATTGACACAGGAATaGCTGAAACTCAGAACCCGG | + |
|
Preference number: 3 (lower is better) Translates to: ELAVEVLPKAFAEQVKSKGLTQE*LKLRTR Trigger: CCGGGTTCTGAGTTTCAGCAATTCCTGTGTCAATCC...TTTGCTCTTTACCTGCTCAGCGAAAGCTTTAGGAAGCACTTCAACAGCCAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| 3UTR TCA 72 bp | CTTTGTATTGCTTTTCAAAGAAGTCATTCTTACTGCTaGCGAGCTGAGGAGGTAGCTGGTGGACCTCTCGGG | + |
|
Preference number: 3 (lower is better) Translates to: LCIAFQRSHSYC*RAEEVAGGPLG Trigger: CCCGAGAGGTCCACCAGCTACCTCCTCAGCTCGTCAGCAGTAAGAATGACTTCTTTGAAAAGCAATACAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| 3UTR-3UTR CAA 90 bp | TGCTTTGTGCTATGTCCATTGAGCAGGACAGAATTGGTCACCACATTCTTTGTAGGATTGACACAGGAATaGCTGAAACTCAGAACCCGG | + |
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Preference number: 3 (lower is better) Translates to: CFVLCPLSRTELVTTFFVGLTQE*LKLRTR Trigger: CCGGGTTCTGAGTTTCAGCAATTCCTGTGTCAATCC...TACAAAGAATGTGGTGACCAATTCTGTCCTGCTCAATGGACATAGCACAAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| 3UTR GCA 72 bp | TTCCGTGTCTCCATCTCATCAGCTCATCAAAGTGATTaGTCTAACAGCTTGGCCAGGACAATTATGGTTACC | + |
|
Preference number: 3 (lower is better) Translates to: FRVSISSAHQSD*SNSLARTIMVT Trigger: GGTAACCATAATTGTCCTGGCCAAGCTGTTAGAGCAATCACTTTGATGAGCTGATGAGATGGAGACACGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186382.7 |
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| 3UTR TCA 72 bp | ATCACAGTGCTATTTCTTGCTTTGTGCTATGTCCATTaGGCAGGACAGAATTGGTCACCACATTCTTTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: ITVLFLALCYVH*AGQNWSPHSLY Trigger: ATACAAAGAATGTGGTGACCAATTCTGTCCTGCTCAATGGACATAGCACAAAGCAAGAAATAGCACTGTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| 3UTR CCA 72 bp | TCTCATCAGCTCATCAAAGTGATTGCTCTAACAGCTTaGCCAGGACAATTATGGTTACCACATCATATTCTT | + |
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Preference number: 3 (lower is better) Translates to: SHQLIKVIALTA*PGQLWLPHHIL Trigger: AAGAATATGATGTGGTAACCATAATTGTCCTGGCCAAGCTGTTAGAGCAATCACTTTGATGAGCTGATGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186382.7 |
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| CDS-3UTR GCA 90 bp | CTGAAACTCAGAACCCGGGCCACTAAGGTGACGATCATGTGCCCGAGAGAAGGAAACACACCGGACGTCTaGATGTCCATGGGGTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: LKLRTRATKVTIMCPREGNTPDV*MSMGFT Trigger: CGTGAACCCCATGGACATGCAGACGTCCGGTGTGTT...TCCTTCTCTCGGGCACATGATCGTCACCTTAGTGGCCCGGGTTCTGAGTTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186382.7 |
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| CDS-3UTR CCA 90 bp | TTCCGCCCACAACAGAGCTGGCTGTTGAAGTGCTTCCTAAAGCTTTCGCTGAGCTCTCATTCGCCTCTGTaGGAAAGGAGAGGTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FRPQQSWLLKCFLKLSLSSHSPL*ERRGWR Trigger: TCTCCAACCTCTCCTTTCCCACAGAGGCGAATGAGA...GCTCAGCGAAAGCTTTAGGAAGCACTTCAACAGCCAGCTCTGTTGTGGGCGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| CDS-3UTR TCA 90 bp | TCACAGTGCTATTTCTTGCTTTGTGCTATGTCCATTGAGCAGGACAGAATTGGTGCTGGATGGCCGGGATaGGTTTGCAGCCCAGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: SQCYFLLCAMSIEQDRIGAGWPG*VCSPAC Trigger: GCAAGCTGGGCTGCAAACTCATCCCGGCCATCCAGC...ACCAATTCTGTCCTGCTCAATGGACATAGCACAAAGCAAGAAATAGCACTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| CDS-3UTR TCA 90 bp | TTGCTTTGTGCTATGTCCATTGAGCAGGACAGAATTGGTCACCACATTCTTTGTGCTGGATGGCCGGGATaGGTTTGCAGCCCAGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLCAMSIEQDRIGHHILCAGWPG*VCSPAC Trigger: GCAAGCTGGGCTGCAAACTCATCCCGGCCATCCAGC...ACAAAGAATGTGGTGACCAATTCTGTCCTGCTCAATGGACATAGCACAAAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| CDS-3UTR TCA 90 bp | GACTTCCGCCCACAACAGAGCTGGCTGTTGAAGTGCTTCCTAAAGCTTTCGCTGAATGCGTGCTACTTCTaGAAACACAGCTTCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: DFRPQQSWLLKCFLKLSLNACYF*KHSFRD Trigger: GTCCCTGAAGCTGTGTTTTCAGAAGTAGCACGCATT...CAGCGAAAGCTTTAGGAAGCACTTCAACAGCCAGCTCTGTTGTGGGCGGAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186382.7 |
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| CDS-3UTR CCA 90 bp | TCTTGCTTTGTGCTATGTCCATTGAGCAGGACAGAATTGGTCACCACATTCTTTACGGGAGGCGTCCACTaGAACGCAGGTCAGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SCFVLCPLSRTELVTTFFTGGVH*NAGQQQ Trigger: CTGCTGCTGACCTGCGTTCCAGTGGACGCCTCCCGT...AAAGAATGTGGTGACCAATTCTGTCCTGCTCAATGGACATAGCACAAAGCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| CDS-3UTR CCA 90 bp | ATTTGCTTTGCACTTGAGTCAATCATGAGCTCTCCTGATGAATTAGCTAGGGAGTCACCAACTCCGCGGTaGTCCCATCTGAGTCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: ICFALESIMSSPDELARESPTPR*SHLSRA Trigger: TGCCCGACTCAGATGGGACCACCGCGGAGTTGGTGA...CTCCCTAGCTAATTCATCAGGAGAGCTCATGATTGACTCAAGTGCAAAGCAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020015.10 |
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| CDS-3UTR CCA 90 bp | ATTTCTTGCTTTGTGCTATGTCCATTGAGCAGGACAGAATTGGTCACCACATTCTCACCAACTCCGCGGTaGTCCCATCTGAGTCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: ISCFVLCPLSRTELVTTFSPTPR*SHLSRA Trigger: TGCCCGACTCAGATGGGACCACCGCGGAGTTGGTGA...GAATGTGGTGACCAATTCTGTCCTGCTCAATGGACATAGCACAAAGCAAGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| CDS-3UTR CCA 90 bp | CTTTGTGCTATGTCCATTGAGCAGGACAGAATTGGTCACCACATTCTTTGTATTACGGGAGGCGTCCACTaGAACGCAGGTCAGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LCAMSIEQDRIGHHILCITGGVH*NAGQQQ Trigger: CTGCTGCTGACCTGCGTTCCAGTGGACGCCTCCCGT...AATACAAAGAATGTGGTGACCAATTCTGTCCTGCTCAATGGACATAGCACAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| CDS-3UTR TCA 90 bp | GCCAGGCGTTTCCGTGTCTCCATCTCATCAGCTCATCAAAGTGATTGCTCTAACATATCTTCACCAGCATaGTGTTGCCCAGCAAACCCA | + |
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Preference number: 4 (lower is better) Translates to: ARRFRVSISSAHQSDCSNISSPA*CCPANP Trigger: TGGGTTTGCTGGGCAACATCATGCTGGTGAAGATAT...GTTAGAGCAATCACTTTGATGAGCTGATGAGATGGAGACACGGAAACGCCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186382.7 |
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| CDS-3UTR TCA 90 bp | GATGAATTAGCTAGGGAGCAGTATAAATGTGGACATTATTTAGTTCTGCTTTGCGCTGGATGGCCGGGATaGGTTTGCAGCCCAGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: DELAREQYKCGHYLVLLCAGWPG*VCSPAC Trigger: GCAAGCTGGGCTGCAAACTCATCCCGGCCATCCAGC...GCAAAGCAGAACTAAATAATGTCCACATTTATACTGCTCCCTAGCTAATTCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020015.10 |
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| CDS-3UTR GCA 90 bp | ATTTGCTTTGCACTTGAGTCAATCATGAGCTCTCCTGATGAATTAGCTAGGGAGAACACACCGGACGTCTaGATGTCCATGGGGTTCACG | + |
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Preference number: 4 (lower is better) Translates to: ICFALESIMSSPDELARENTPDV*MSMGFT Trigger: CGTGAACCCCATGGACATGCAGACGTCCGGTGTGTT...CTCCCTAGCTAATTCATCAGGAGAGCTCATGATTGACTCAAGTGCAAAGCAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020015.10 |
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| CDS-3UTR GCA 90 bp | TGCTTTGTGCTATGTCCATTGAGCAGGACAGAATTGGTCACCACATTCTTTGTACACCCAGATGCCCACTaGCTTCAAACTGGTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: CFVLCPLSRTELVTTFFVHPDAH*LQTGPQ Trigger: CTGTGGACCAGTTTGAAGGCAGTGGGCATCTGGGTG...TACAAAGAATGTGGTGACCAATTCTGTCCTGCTCAATGGACATAGCACAAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186382.7 |
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| CDS-3UTR CCA 90 bp | GCTAGGGAGCAGTATAAATGTGGACATTATTTAGTTCTGCTTTGCTACGTAATAACGGGAGGCGTCCACTaGAACGCAGGTCAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AREQYKCGHYLVLLCYVITGGVH*NAGQQQ Trigger: CTGCTGCTGACCTGCGTTCCAGTGGACGCCTCCCGT...TATTACGTAGCAAAGCAGAACTAAATAATGTCCACATTTATACTGCTCCCTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020015.10 |
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| CDS-3UTR TCA 90 bp | TCTTGCTTTGTGCTATGTCCATTGAGCAGGACAGAATTGGTCACCACATTCTTTGCATGGCGCTGTTGGTaGGGAATATCTTCACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SCFVLCPLSRTELVTTFFAWRCW*GISSPA Trigger: TGCTGGTGAAGATATTCCTCACCAACAGCGCCATGC...AAAGAATGTGGTGACCAATTCTGTCCTGCTCAATGGACATAGCACAAAGCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| CDS-3UTR CCA 90 bp | ATTTGCTTTGCACTTGAGTCAATCATGAGCTCTCCTGATGAATTAGCTAGGGAGTCTCATTCGCCTCTGTaGGAAAGGAGAGGTTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: ICFALESIMSSPDELARESHSPL*ERRGWR Trigger: TCTCCAACCTCTCCTTTCCCACAGAGGCGAATGAGA...CTCCCTAGCTAATTCATCAGGAGAGCTCATGATTGACTCAAGTGCAAAGCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020015.10 |
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| CDS-3UTR CCA 90 bp | TCTTGCTTTGTGCTATGTCCATTGAGCAGGACAGAATTGGTCACCACATTCTTTTCTCATTCGCCTCTGTaGGAAAGGAGAGGTTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SCFVLCPLSRTELVTTFFSHSPL*ERRGWR Trigger: TCTCCAACCTCTCCTTTCCCACAGAGGCGAATGAGA...AAAGAATGTGGTGACCAATTCTGTCCTGCTCAATGGACATAGCACAAAGCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| CDS-3UTR GCA 90 bp | GCTAGGGAGCAGTATAAATGTGGACATTATTTAGTTCTGCTTTGCTACGTAATACACCCAGATGCCCACTaGCTTCAAACTGGTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: AREQYKCGHYLVLLCYVIHPDAH*LQTGPQ Trigger: CTGTGGACCAGTTTGAAGGCAGTGGGCATCTGGGTG...TATTACGTAGCAAAGCAGAACTAAATAATGTCCACATTTATACTGCTCCCTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020015.10 |
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| CDS-3UTR GCA 90 bp | AGCTCTCCTGATGAATTAGCTAGGGAGCAGTATAAATGTGGACATTATTTAGTTCAGAGACCACCCAGATaGCCACTGCCTTCAAACTGG | + |
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Preference number: 4 (lower is better) Translates to: SSPDELAREQYKCGHYLVQRPPR*PLPSNW Trigger: CCAGTTTGAAGGCAGTGGGCATCTGGGTGGTCTCTG...AACTAAATAATGTCCACATTTATACTGCTCCCTAGCTAATTCATCAGGAGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020015.10 |
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| CDS-3UTR CCA 90 bp | TCTTGCTTTGTGCTATGTCCATTGAGCAGGACAGAATTGGTCACCACATTCTTTAGTAGAGGACGTGGTTaGGAAACCAGCAGAAGACAA | + |
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Preference number: 4 (lower is better) Translates to: SCFVLCPLSRTELVTTFFSRGRG*ETSRRQ Trigger: TTGTCTTCTGCTGGTTTCCCAACCACGTCCTCTACT...AAAGAATGTGGTGACCAATTCTGTCCTGCTCAATGGACATAGCACAAAGCAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190751.2 |
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| CDS-3UTR TCA 90 bp | TTCTTTGTATTGCTTTTCAAAGAAGTCATTCTTACTGCTGACGAGCTGAGGAGGATATCTTCACCAGCATaGTGTTGCCCAGCAAACCCA | + |
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Preference number: 4 (lower is better) Translates to: FFVLLFKEVILTADELRRISSPA*CCPANP Trigger: TGGGTTTGCTGGGCAACATCATGCTGGTGAAGATAT...CCTCCTCAGCTCGTCAGCAGTAAGAATGACTTCTTTGAAAAGCAATACAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| CDS-3UTR TCA 90 bp | AGCTCTCCTGATGAATTAGCTAGGGAGCAGTATAAATGTGGACATTATTTAGTTGCATGGCGCTGTTGGTaGGGAATATCTTCACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SSPDELAREQYKCGHYLVAWRCW*GISSPA Trigger: TGCTGGTGAAGATATTCCTCACCAACAGCGCCATGC...AACTAAATAATGTCCACATTTATACTGCTCCCTAGCTAATTCATCAGGAGAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020015.10 |
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| 3UTR CAA 72 bp | CATCACAGTGCTATTTCTTGCTTTGTGCTATGTCCATaGAGCAGGACAGAATTGGTCACCACATTCTTTGTA | + |
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Preference number: 4 (lower is better) Translates to: HHSAISCFVLCP*SRTELVTTFFV Trigger: TACAAAGAATGTGGTGACCAATTCTGTCCTGCTCAATGGACATAGCACAAAGCAAGAAATAGCACTGTGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| CDS-3UTR TCA 90 bp | AGCTCTCCTGATGAATTAGCTAGGGAGCAGTATAAATGTGGACATTATTTAGTTATATCTTCACCAGCATaGTGTTGCCCAGCAAACCCA | + |
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Preference number: 4 (lower is better) Translates to: SSPDELAREQYKCGHYLVISSPA*CCPANP Trigger: TGGGTTTGCTGGGCAACATCATGCTGGTGAAGATAT...AACTAAATAATGTCCACATTTATACTGCTCCCTAGCTAATTCATCAGGAGAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020015.10 |
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| CDS-3UTR TCA 90 bp | GCTAGGGAGCAGTATAAATGTGGACATTATTTAGTTCTGCTTTGCTACGTAATAAATGCGTGCTACTTCTaGAAACACAGCTTCAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: AREQYKCGHYLVLLCYVINACYF*KHSFRD Trigger: GTCCCTGAAGCTGTGTTTTCAGAAGTAGCACGCATT...TATTACGTAGCAAAGCAGAACTAAATAATGTCCACATTTATACTGCTCCCTAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020015.10 |
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| CDS-3UTR GCA 90 bp | GCTAGGGAGCAGTATAAATGTGGACATTATTTAGTTCTGCTTTGCTACGTAATAAGCTGGCTGTTGAAGTaGTTCCTAAAGCTTTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: AREQYKCGHYLVLLCYVISWLLK*FLKLSL Trigger: CAGCGAAAGCTTTAGGAAGCACTTCAACAGCCAGCT...TATTACGTAGCAAAGCAGAACTAAATAATGTCCACATTTATACTGCTCCCTAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020015.10 |
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| CDS-3UTR CCA 90 bp | GCTAGGGAGCAGTATAAATGTGGACATTATTTAGTTCTGCTTTGCTACGTAATAAGTAGAGGACGTGGTTaGGAAACCAGCAGAAGACAA | + |
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Preference number: 4 (lower is better) Translates to: AREQYKCGHYLVLLCYVISRGRG*ETSRRQ Trigger: TTGTCTTCTGCTGGTTTCCCAACCACGTCCTCTACT...TATTACGTAGCAAAGCAGAACTAAATAATGTCCACATTTATACTGCTCCCTAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020015.10 |
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| 3UTR CAA 72 bp | ATCTCATCAGCTCATCAAAGTGATTGCTCTAACAGCTaGGCCAGGACAATTATGGTTACCACATCATATTCT | + |
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Preference number: 4 (lower is better) Translates to: ISSAHQSDCSNS*ARTIMVTTSYS Trigger: AGAATATGATGTGGTAACCATAATTGTCCTGGCCAAGCTGTTAGAGCAATCACTTTGATGAGCTGATGAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186382.7 |
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| 3UTR CAA 72 bp | AGTGAATTAGATCGTATCCCATCACAGTGCTATTTCTaGCTTTGTGCTATGTCCATTGAGCAGGACAGAATT | + |
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Preference number: 4 (lower is better) Translates to: SELDRIPSQCYF*LCAMSIEQDRI Trigger: AATTCTGTCCTGCTCAATGGACATAGCACAAAGCAAGAAATAGCACTGTGATGGGATACGATCTAATTCACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| CDS-3UTR GCA 90 bp | GATGAATTAGCTAGGGAGCAGTATAAATGTGGACATTATTTAGTTCTGCTTTGCCACAGTGCTATTTCTTaGTTTGTGCTATGTCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: DELAREQYKCGHYLVLLCHSAIS*FVLCPL Trigger: CAATGGACATAGCACAAAGCAAGAAATAGCACTGTG...GCAAAGCAGAACTAAATAATGTCCACATTTATACTGCTCCCTAGCTAATTCATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020015.10 |
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| CDS TCA 90 bp | GGATGGTATCACACAGCGGATCACCAACTCCGCGGTGGTCCCATCTaGGTCGGGCAGGAAATCCTTTTCCCACACCTCGGGTACCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GWYHTADHQLRGGPI*VGQEILFPHLGYQL Trigger: GAGCTGGTACCCGAGGTGTGGGAAAAGGATTTCCTGCCCGACTCAGATGGGACCACCGCGGAGTTGGTGATCCGCTGTGTGATACCATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020015.10 ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| CDS CCA 90 bp | CCGCCAACAACACAGAGACCACCCAGATGCCCACTGCCTTCAAACTaGTCCACAGCAACACACCGGACGTCTGCATGTCCATGGGGTTCA | + |
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Preference number: 5 (lower is better) Translates to: PPTTQRPPRCPLPSN*STATHRTSACPWGS Trigger: TGAACCCCATGGACATGCAGACGTCCGGTGTGTTGCTGTGGACCAGTTTGAAGGCAGTGGGCATCTGGGTGGTCTCTGTGTTGTTGGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020015.10 ENSMUST00000186382.7 |
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| CDS GCA 90 bp | ATGCCCACTGCCTTCAAACTGGTCCACAGCAACACACCGGACGTCTaGATGTCCATGGGGTTCACGATAGCTCTGTACCTGTCAGCGCTG | + |
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Preference number: 5 (lower is better) Translates to: MPTAFKLVHSNTPDV*MSMGFTIALYLSAL Trigger: CAGCGCTGACAGGTACAGAGCTATCGTGAACCCCATGGACATGCAGACGTCCGGTGTGTTGCTGTGGACCAGTTTGAAGGCAGTGGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020015.10 ENSMUST00000186382.7 |
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| CDS CCA 90 bp | TTAGGTAGAGGGATGGTATCACACAGCGGATCACCAACTCCGCGGTaGTCCCATCTGAGTCGGGCAGGAAATCCTTTTCCCACACCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LGRGMVSHSGSPTPR*SHLSRAGNPFPTPR Trigger: CCGAGGTGTGGGAAAAGGATTTCCTGCCCGACTCAGATGGGACCACCGCGGAGTTGGTGATCCGCTGTGTGATACCATCCCTCTACCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020015.10 ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| CDS-3UTR CAA 90 bp | GGTGGACCTCTCGGGATAGGACTTCCGCCCACAACAGAGCTGGCTGTTGAAGTGTTCCGCATGGCGCTGTaGGTGAGGAATATCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: GGPLGIGLPPTTELAVEVFRMAL*VRNIFT Trigger: GGTGAAGATATTCCTCACCAACAGCGCCATGCGGAA...CACTTCAACAGCCAGCTCTGTTGTGGGCGGAAGTCCTATCCCGAGAGGTCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| CDS-3UTR CAA 90 bp | GCCAGGCGTTTCCGTGTCTCCATCTCATCAGCTCATCAAAGTGATTGCTCTAACTTCACCAGCATGATGTaGCCCAGCAAACCCACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: ARRFRVSISSAHQSDCSNFTSMM*PSKPTE Trigger: CTCGGTGGGTTTGCTGGGCAACATCATGCTGGTGAA...GTTAGAGCAATCACTTTGATGAGCTGATGAGATGGAGACACGGAAACGCCTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186382.7 |
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| CDS-3UTR CAA 90 bp | ATTTGCTTTGCACTTGAGTCAATCATGAGCTCTCCTGATGAATTAGCTAGGGAGTTCACCAGCATGATGTaGCCCAGCAAACCCACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: ICFALESIMSSPDELAREFTSMM*PSKPTE Trigger: CTCGGTGGGTTTGCTGGGCAACATCATGCTGGTGAA...CTCCCTAGCTAATTCATCAGGAGAGCTCATGATTGACTCAAGTGCAAAGCAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020015.10 |
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| CDS-3UTR CAA 90 bp | TTGCTTTGTGCTATGTCCATTGAGCAGGACAGAATTGGTCACCACATTCTTTGTTTCACCAGCATGATGTaGCCCAGCAAACCCACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLCAMSIEQDRIGHHILCFTSMM*PSKPTE Trigger: CTCGGTGGGTTTGCTGGGCAACATCATGCTGGTGAA...ACAAAGAATGTGGTGACCAATTCTGTCCTGCTCAATGGACATAGCACAAAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| CDS-3UTR CAA 90 bp | AGAACCCGGGCCACTAAGGTGACGATCATGTGCCCGAGAGAAGGATCTATCTCCGCACTGAATGAATCTTaGGATGTAACTCATCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RTRATKVTIMCPREGSISALNES*DVTHLF Trigger: AAACAGATGAGTTACATCCAAAGATTCATTCAGTGC...GGAGATAGATCCTTCTCTCGGGCACATGATCGTCACCTTAGTGGCCCGGGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186382.7 |
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| CDS-3UTR CAA 90 bp | ATTTGCTTTGCACTTGAGTCAATCATGAGCTCTCCTGATGAATTAGCTAGGGAGTTCCGCATGGCGCTGTaGGTGAGGAATATCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: ICFALESIMSSPDELAREFRMAL*VRNIFT Trigger: GGTGAAGATATTCCTCACCAACAGCGCCATGCGGAA...CTCCCTAGCTAATTCATCAGGAGAGCTCATGATTGACTCAAGTGCAAAGCAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020015.10 |
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| CDS-3UTR CAA 90 bp | ATTTCTTGCTTTGTGCTATGTCCATTGAGCAGGACAGAATTGGTCACCACATTCAGTTTGCAGCCCAGCTaGCCGAACACCCATTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: ISCFVLCPLSRTELVTTFSLQPS*PNTHSS Trigger: TGATGAATGGGTGTTCGGCAAGCTGGGCTGCAAACT...GAATGTGGTGACCAATTCTGTCCTGCTCAATGGACATAGCACAAAGCAAGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| CDS-3UTR CAA 90 bp | TTCTTTGTATTGCTTTTCAAAGAAGTCATTCTTACTGCTGACGAGCTGAGGAGGAGTTTGCAGCCCAGCTaGCCGAACACCCATTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: FFVLLFKEVILTADELRRSLQPS*PNTHSS Trigger: TGATGAATGGGTGTTCGGCAAGCTGGGCTGCAAACT...CCTCCTCAGCTCGTCAGCAGTAAGAATGACTTCTTTGAAAAGCAATACAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| CDS-3UTR CAA 90 bp | ATTTGCTTTGCACTTGAGTCAATCATGAGCTCTCCTGATGAATTAGCTAGGGAGGGATTGACACAGGAATaGCTGAAACTCAGAACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ICFALESIMSSPDELAREGLTQE*LKLRTR Trigger: CCGGGTTCTGAGTTTCAGCAATTCCTGTGTCAATCC...CTCCCTAGCTAATTCATCAGGAGAGCTCATGATTGACTCAAGTGCAAAGCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020015.10 |
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| CDS TCA 90 bp | TCTTTGGATGTAACTCATCTGTTTGTGGGTAGGGTATGCATGCTGTaGAACTGCTGTTATCCAAGCTACCAATGCGTGCTACTTCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SLDVTHLFVGRVCML*NCCYPSYQCVLLLK Trigger: TTTCAGAAGTAGCACGCATTGGTAGCTTGGATAACAGCAGTTTCACAGCATGCATACCCTACCCACAAACAGATGAGTTACATCCAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020015.10 ENSMUST00000186382.7 ENSMUST00000190114.2 |
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| CDS-3UTR CAA 90 bp | GCTAGGGAGCAGTATAAATGTGGACATTATTTAGTTCTGCTTTGCTACGTAATAAGTTTGCAGCCCAGCTaGCCGAACACCCATTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: AREQYKCGHYLVLLCYVISLQPS*PNTHSS Trigger: TGATGAATGGGTGTTCGGCAAGCTGGGCTGCAAACT...TATTACGTAGCAAAGCAGAACTAAATAATGTCCACATTTATACTGCTCCCTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020015.10 |
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| CDS-3UTR CAA 90 bp | ATTTGCTTTGCACTTGAGTCAATCATGAGCTCTCCTGATGAATTAGCTAGGGAGTTTGTGCTATGTCCATaGAGCAGGACAGAATTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ICFALESIMSSPDELAREFVLCP*SRTELV Trigger: GACCAATTCTGTCCTGCTCAATGGACATAGCACAAA...CTCCCTAGCTAATTCATCAGGAGAGCTCATGATTGACTCAAGTGCAAAGCAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020015.10 |
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| CDS-3UTR CAA 90 bp | GATGAATTAGCTAGGGAGCAGTATAAATGTGGACATTATTTAGTTCTGCTTTGCCAACAGAGCTGGCTGTaGAAGTGCTTCCTAAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: DELAREQYKCGHYLVLLCQQSWL*KCFLKL Trigger: AAGCTTTAGGAAGCACTTCAACAGCCAGCTCTGTTG...GCAAAGCAGAACTAAATAATGTCCACATTTATACTGCTCCCTAGCTAATTCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020015.10 |
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| CDS GCA 90 bp | AATGAATGCCCAGGTCTGTCTTTGTATTTCATGGGATGGACAATCTaGTTTTTGGTATGTTCATTGTATTCTCCAGGAAGATTGTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: NECPGLSLYFMGWTI*FLVCSLYSPGRLCA Trigger: TGCACACAATCTTCCTGGAGAATACAATGAACATACCAAAAAGCAGATTGTCCATCCCATGAAATACAAAGACAGACCTGGGCATTCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190114.2 |
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| CDS-3UTR CAA 90 bp | GCTAGGGAGCAGTATAAATGTGGACATTATTTAGTTCTGCTTTGCTACGTAATATCACAGTGCTATTTCTaGCTTTGTGCTATGTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: AREQYKCGHYLVLLCYVISQCYF*LCAMSI Trigger: AATGGACATAGCACAAAGCAAGAAATAGCACTGTGA...TATTACGTAGCAAAGCAGAACTAAATAATGTCCACATTTATACTGCTCCCTAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020015.10 |
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| CDS-3UTR CAA 90 bp | GCTAGGGAGCAGTATAAATGTGGACATTATTTAGTTCTGCTTTGCTACGTAATAGCACTGAATGAATCTTaGGATGTAACTCATCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: AREQYKCGHYLVLLCYVIALNES*DVTHLF Trigger: AAACAGATGAGTTACATCCAAAGATTCATTCAGTGC...TATTACGTAGCAAAGCAGAACTAAATAATGTCCACATTTATACTGCTCCCTAGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020015.10 |
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| CDS TCA 72 bp | CACACAGCGGATCACCAACTCCGCGGTGGTCCCATCTaGGTCGGGCAGGAAATCCTTTTCCCACACCTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: HTADHQLRGGPI*VGQEILFPHLG Trigger: CCCGAGGTGTGGGAAAAGGATTTCCTGCCCGACTCAGATGGGACCACCGCGGAGTTGGTGATCCGCTGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020015.10 ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| CDS CAA 72 bp | ACCCCCACCGAGGTGAGCTGGATGGCCGGGATGAGTTaGCAGCCCAGCTTGCCGAACACCCATTCATCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: TPTEVSWMAGMS*QPSLPNTHSSK Trigger: CTTTGATGAATGGGTGTTCGGCAAGCTGGGCTGCAAACTCATCCCGGCCATCCAGCTCACCTCGGTGGGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020015.10 ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| CDS GCA 72 bp | GACCGCCAACAACACAGAGACCACCCAGATGCCCACTaGCTTCAAACTGGTCCACAGCAACACACCGGACGT | + |
|
Preference number: 6 (lower is better) Translates to: DRQQHRDHPDAH*LQTGPQQHTGR Trigger: ACGTCCGGTGTGTTGCTGTGGACCAGTTTGAAGGCAGTGGGCATCTGGGTGGTCTCTGTGTTGTTGGCGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020015.10 ENSMUST00000186382.7 ENSMUST00000190114.2 |
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| CDS CCA 72 bp | GGGATGGTATCACACAGCGGATCACCAACTCCGCGGTaGTCCCATCTGAGTCGGGCAGGAAATCCTTTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GMVSHSGSPTPR*SHLSRAGNPFP Trigger: GGGAAAAGGATTTCCTGCCCGACTCAGATGGGACCACCGCGGAGTTGGTGATCCGCTGTGTGATACCATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020015.10 ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| CDS GCA 72 bp | GCCTTCAAACTGGTCCACAGCAACACACCGGACGTCTaGATGTCCATGGGGTTCACGATAGCTCTGTACCTG | + |
|
Preference number: 6 (lower is better) Translates to: AFKLVHSNTPDV*MSMGFTIALYL Trigger: CAGGTACAGAGCTATCGTGAACCCCATGGACATGCAGACGTCCGGTGTGTTGCTGTGGACCAGTTTGAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020015.10 ENSMUST00000186382.7 |
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| CDS CAA 90 bp | GCCAGGTTAGAGATGAAGATGTTAGGGACATTCCGCATGGCGCTGTaGGTGAGGAATATCTTCACCAGCATGATGTTGCCCAGCAAACCC | + |
|
Preference number: 6 (lower is better) Translates to: ARLEMKMLGTFRMAL*VRNIFTSMMLPSKP Trigger: GGGTTTGCTGGGCAACATCATGCTGGTGAAGATATTCCTCACCAACAGCGCCATGCGGAATGTCCCTAACATCTTCATCTCTAACCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020015.10 ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| CDS CAA 72 bp | GAGATGAAGATGTTAGGGACATTCCGCATGGCGCTGTaGGTGAGGAATATCTTCACCAGCATGATGTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: EMKMLGTFRMAL*VRNIFTSMMLP Trigger: GGGCAACATCATGCTGGTGAAGATATTCCTCACCAACAGCGCCATGCGGAATGTCCCTAACATCTTCATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020015.10 ENSMUST00000186382.7 ENSMUST00000190751.2 |
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| CDS TCA 72 bp | ACTGCTGTTATCCAAGCTACCAATGCGTGCTACTTCTaGAAACACAGCTTCAGGGACCGCCAACAACACAGA | + |
|
Preference number: 6 (lower is better) Translates to: TAVIQATNACYF*KHSFRDRQQHR Trigger: TCTGTGTTGTTGGCGGTCCCTGAAGCTGTGTTTTCAGAAGTAGCACGCATTGGTAGCTTGGATAACAGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020015.10 ENSMUST00000186382.7 ENSMUST00000190114.2 |
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| CDS TCA 72 bp | GTAACTCATCTGTTTGTGGGTAGGGTATGCATGCTGTaGAACTGCTGTTATCCAAGCTACCAATGCGTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: VTHLFVGRVCML*NCCYPSYQCVL Trigger: TAGCACGCATTGGTAGCTTGGATAACAGCAGTTTCACAGCATGCATACCCTACCCACAAACAGATGAGTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020015.10 ENSMUST00000186382.7 ENSMUST00000190114.2 |
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| CDS CAA 90 bp | TGCCCAGGTCTGTCTTTGTATTTCATGGGATGGACAATCTGCTTTTaGGTATGTTCATTGTATTCTCCAGGAAGATTGTGTGCACTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: CPGLSLYFMGWTICF*VCSLYSPGRLCALL Trigger: TAAAAGTGCACACAATCTTCCTGGAGAATACAATGAACATACCAAAAAGCAGATTGTCCATCCCATGAAATACAAAGACAGACCTGGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190114.2 |
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| CDS GCA 72 bp | AATTCCCTAAGAATCCTTTCAGCTAAAGCAAATGAATaGCCAGGTCTGTCTTTGTATTTCATGGGATGGACA | + |
|
Preference number: 6 (lower is better) Translates to: NSLRILSAKANE*PGLSLYFMGWT Trigger: TGTCCATCCCATGAAATACAAAGACAGACCTGGGCATTCATTTGCTTTAGCTGAAAGGATTCTTAGGGAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190114.2 |
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| CDS CAA 72 bp | CTTTCAGCTAAAGCAAATGAATGCCCAGGTCTGTCTTaGTATTTCATGGGATGGACAATCTGCTTTTTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LSAKANECPGLS*YFMGWTICFLV Trigger: TACCAAAAAGCAGATTGTCCATCCCATGAAATACAAAGACAGACCTGGGCATTCATTTGCTTTAGCTGAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190114.2 |
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| CDS CCA 72 bp | AAGCAAATGAATGCCCAGGTCTGTCTTTGTATTTCATaGGATGGACAATCTGCTTTTTGGTATGTTCATTGT | + |
|
Preference number: 6 (lower is better) Translates to: KQMNAQVCLCIS*DGQSAFWYVHC Trigger: ACAATGAACATACCAAAAAGCAGATTGTCCATCCCATGAAATACAAAGACAGACCTGGGCATTCATTTGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190114.2 |
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| CDS CAA 72 bp | CGTTTCCGTGTCTCCATCTGCTTTTTGGTATGTTCATaGTATTCTCCAGGAAGATTGTGTGCACTTTTAATT | + |
|
Preference number: 6 (lower is better) Translates to: RFRVSICFLVCS*YSPGRLCALLI Trigger: AATTAAAAGTGCACACAATCTTCCTGGAGAATACAATGAACATACCAAAAAGCAGATGGAGACACGGAAACG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020015.10 |
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| CDS CAA 72 bp | TTCATGGGATGGACAATCTGCTTTTTGGTATGTTCATaGTATTCTCCAGGAAGATTGTGTGCACTTTTAATT | + |
|
Preference number: 6 (lower is better) Translates to: FMGWTICFLVCS*YSPGRLCALLI Trigger: AATTAAAAGTGCACACAATCTTCCTGGAGAATACAATGAACATACCAAAAAGCAGATTGTCCATCCCATGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190114.2 |
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