Pregenerated sensors for NLRP9C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040614Ensembl transcript IDs: ENSMUST00000041845.14, ENSMUST00000085944.6
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGATGTAAAGAAGGGTGGGGGTGGAACAATGTGGAAGAACAGCTCTaGAGACAGCCACCAGTACCATGGTGTACAACTTGGGACAGGGTA | + |
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Preference number: 1 (lower is better) Translates to: RCKEGWGWNNVEEQL*RQPPVPWCTTWDRV Trigger: TACCCTGTCCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTCCACCCCCACCCTTCTTTACATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| 3UTR CCA 72 bp | GAAGGGTGGGGGTGGAACAATGTGGAAGAACAGCTCTaGAGACAGCCACCAGTACCATGGTGTACAACTTGG | + |
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Preference number: 3 (lower is better) Translates to: EGWGWNNVEEQL*RQPPVPWCTTW Trigger: CCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTCCACCCCCACCCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| 3UTR CCA 72 bp | CAAAGTGGTGAGGGGAGATGTAAAGAAGGGTGGGGGTaGAACAATGTGGAAGAACAGCTCTGGAGACAGCCA | + |
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Preference number: 3 (lower is better) Translates to: QSGEGRCKEGWG*NNVEEQLWRQP Trigger: TGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTCCACCCCCACCCTTCTTTACATCTCCCCTCACCACTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| 3UTR CCA 72 bp | GTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATaGTGTACAACTTGGGACAGGGTATACAGGAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: VEEQLWRQPPVP*CTTWDRVYRRN Trigger: GTTTCTCCTGTATACCCTGTCCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| 3UTR CCA 72 bp | ACATTGCAAAGTGGTGAGGGGAGATGTAAAGAAGGGTaGGGGTGGAACAATGTGGAAGAACAGCTCTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: TLQSGEGRCKEG*GWNNVEEQLWR Trigger: TCTCCAGAGCTGTTCTTCCACATTGTTCCACCCCCACCCTTCTTTACATCTCCCCTCACCACTTTGCAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR TCA 90 bp | GTGGAACAATGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACATCACCAGCCCAGAGTaGTGCAAGGCATTCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: VEQCGRTALETATSTMVYITSPE*CKAFQS Trigger: GGACTGGAATGCCTTGCATCACTCTGGGCTGGTGAT...GTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR TCA 90 bp | GAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACTTGGGACAGGTCTCTCCTTTCTATCTaGGCCATGGTTGAGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: EEQLWRQPPVPWCTTWDRSLLSI*AMVERS Trigger: AGACCTCTCAACCATGGCTCAGATAGAAAGGAGAGA...CCTGTCCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR TCA 90 bp | GGGTGGAACAATGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTCACAACAGTCATTGCTaGGCTCACACATGTCTAACC | + |
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Preference number: 4 (lower is better) Translates to: GWNNVEEQLWRQPPVPWCHNSHC*AHTCLT Trigger: GGTTAGACATGTGTGAGCTCAGCAATGACTGTTGTG...ACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTCCACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR TCA 90 bp | GGTGGAACAATGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTATGCAGTAGCTGGGTCTaGCTCAGAATCAAATATGTC | + |
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Preference number: 4 (lower is better) Translates to: GGTMWKNSSGDSHQYHGVCSSWV*LRIKYV Trigger: GACATATTTGATTCTGAGTCAGACCCAGCTACTGCA...TACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR TCA 90 bp | AAAGAAGGGTGGGGGTGGAACAATGTGGAAGAACAGCTCTGGAGACAGCCACCACACCCAACTGAATTTTaGAGAAGGACACACAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: KEGWGWNNVEEQLWRQPPHPTEF*RRTHSR Trigger: TCTACTGTGTGTCCTTCTTCAAAATTCAGTTGGGTG...TGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTCCACCCCCACCCTTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR TCA 90 bp | ACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACTTGGGACAGGGTATAGTAAGACAACATCAGTaGTTCCAGAACACAGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: TALETATSTMVYNLGQGIVRQHQ*FQNTAW Trigger: CCAAGCTGTGTTCTGGAATCACTGATGTTGTCTTAC...TATACCCTGTCCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR TCA 90 bp | ATGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACTTGGGGCAACCATAACTCCTTaGGGGTGCAGTTTGGATATT | + |
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Preference number: 4 (lower is better) Translates to: MWKNSSGDSHQYHGVQLGATITP*GCSLDI Trigger: AATATCCAAACTGCACCCTCAAGGAGTTATGGTTGC...CCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR TCA 90 bp | GGGTGGAACAATGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTGGGATTTTCAACCAATaGGAGATGTTTCACCTTAGA | + |
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Preference number: 4 (lower is better) Translates to: GWNNVEEQLWRQPPVPWCGIFNQ*EMFHLR Trigger: TCTAAGGTGAAACATCTCTCATTGGTTGAAAATCCC...ACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTCCACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR CCA 90 bp | GAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACTTGGGACAGGCTGATGTTGATTCACTaGAAGAGATTACTTCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: EEQLWRQPPVPWCTTWDRLMLIH*KRLLPL Trigger: GAGAGGAAGTAATCTCTTCCAGTGAATCAACATCAG...CCTGTCCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR CCA 90 bp | AGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACTTGGGACAGGGTATACATTCCAGAACACAGCTTaGGTCCTTCAGCATTTTACA | + |
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Preference number: 4 (lower is better) Translates to: SSGDSHQYHGVQLGTGYTFQNTA*VLQHFT Trigger: TGTAAAATGCTGAAGGACCCAAGCTGTGTTCTGGAA...TGTATACCCTGTCCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR TCA 90 bp | GGGAGATGTAAAGAAGGGTGGGGGTGGAACAATGTGGAAGAACAGCTCTGGAGATCATCACTGAGTTTTTaGAAATACTGCAGCAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: GRCKEGWGWNNVEEQLWRSSLSF*KYCSKP Trigger: TGGCTTGCTGCAGTATTTTCAAAAACTCAGTGATGA...TCTCCAGAGCTGTTCTTCCACATTGTTCCACCCCCACCCTTCTTTACATCTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR TCA 90 bp | TGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACTTGGGAACTTCTACACCCAACTaGATTTTGAAGAAGGACACA | + |
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Preference number: 4 (lower is better) Translates to: CGRTALETATSTMVYNLGTSTPN*ILKKDT Trigger: TGTGTCCTTCTTCAAAATTCAGTTGGGTGTAGAAGT...TCCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR TCA 90 bp | ACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACTTGGGACAGGGTATAGCCCAAGCCAAATATTaGTTTGAATGCACTCATGAT | + |
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Preference number: 4 (lower is better) Translates to: TALETATSTMVYNLGQGIAQAKY*FECTHD Trigger: ATCATGAGTGCATTCAAATCAATATTTGGCTTGGGC...TATACCCTGTCCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR GCA 90 bp | GGGAGATGTAAAGAAGGGTGGGGGTGGAACAATGTGGAAGAACAGCTCTGGAGAAAAGAAAAATGTCTGTaGATGGGTCCATTGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: GRCKEGWGWNNVEEQLWRKEKCL*MGPLVL Trigger: CAGAACCAATGGACCCATGCACAGACATTTTTCTTT...TCTCCAGAGCTGTTCTTCCACATTGTTCCACCCCCACCCTTCTTTACATCTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR GCA 90 bp | AAAGAAGGGTGGGGGTGGAACAATGTGGAAGAACAGCTCTGGAGACAGCCACCAGAGAGAGGTGTTTGTTaGTTAAAAGAGCTTCATAGA | + |
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Preference number: 4 (lower is better) Translates to: KEGWGWNNVEEQLWRQPPERGVC*LKELHR Trigger: TCTATGAAGCTCTTTTAAGCAACAAACACCTCTCTC...TGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTCCACCCCCACCCTTCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR GCA 90 bp | AACAATGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACTAGTGATAAGAGCCAATaGCAGGTCTTCACAACAGTC | + |
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Preference number: 4 (lower is better) Translates to: NNVEEQLWRQPPVPWCTTSDKSQ*QVFTTV Trigger: GACTGTTGTGAAGACCTGGCATTGGCTCTTATCACT...AGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR GCA 90 bp | AGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACTTGGGACAGGGTATACATTCTTTTCCACAGCTTaGAGAAATGTCTGTGATTCC | + |
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Preference number: 4 (lower is better) Translates to: SSGDSHQYHGVQLGTGYTFFSTA*RNVCDS Trigger: GGAATCACAGACATTTCTGCAAGCTGTGGAAAAGAA...TGTATACCCTGTCCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR CCA 90 bp | GAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACTTGGGACAGGAGCTCTTTAAATCTCTaGAACTCTTCATCACTGAGT | + |
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Preference number: 4 (lower is better) Translates to: EEQLWRQPPVPWCTTWDRSSLNL*NSSSLS Trigger: ACTCAGTGATGAAGAGTTCCAGAGATTTAAAGAGCT...CCTGTCCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR CCA 90 bp | TGTAAAGAAGGGTGGGGGTGGAACAATGTGGAAGAACAGCTCTGGAGACAGCCACTTGAGGGTGCAGTTTaGATATTTCAAAGCTTCACA | + |
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Preference number: 4 (lower is better) Translates to: CKEGWGWNNVEEQLWRQPLEGAV*IFQSFT Trigger: TGTGAAGCTTTGAAATATCCAAACTGCACCCTCAAG...TGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTCCACCCCCACCCTTCTTTACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR CCA 90 bp | GAACAATGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACAGTTTACACTTTTTGTaGTTCAGAGCCTCACAGAGC | + |
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Preference number: 4 (lower is better) Translates to: EQCGRTALETATSTMVYNSLHFL*FRASQS Trigger: GCTCTGTGAGGCTCTGAACCACAAAAAGTGTAAACT...GTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR TCA 90 bp | AACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACTTGGGACAGGGTATGGAACTCTTCATCACTaGGTTTTTGAAAATACTGCA | + |
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Preference number: 4 (lower is better) Translates to: NSSGDSHQYHGVQLGTGYGTLHH*VFENTA Trigger: TGCAGTATTTTCAAAAACTCAGTGATGAAGAGTTCC...ATACCCTGTCCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR TCA 90 bp | GGTGGAACAATGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTAATTTCTCCTAAAAGTTaGGGTAGGCTTCCAATAACT | + |
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Preference number: 4 (lower is better) Translates to: GGTMWKNSSGDSHQYHGVISPKS*GRLPIT Trigger: AGTTATTGGAAGCCTACCTCAACTTTTAGGAGAAAT...TACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR TCA 90 bp | TCTGGAGACAGCCACCAGTACCATGGTGTACAACTTGGGACAGGGTATACAGGATCATTACACTCTGGTTaGCTGAGACTTTTAAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: SGDSHQYHGVQLGTGYTGSLHSG*LRLLRY Trigger: ATACCTTAAAAGTCTCAGTCAACCAGAGTGTAATGA...TCCTGTATACCCTGTCCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR TCA 90 bp | ACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACTTGGGACAGGGTATAAGTCCAATTGATGGCTaGAAATTTTTGGTCCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: TALETATSTMVYNLGQGISPIDG*KFLVQF Trigger: AAACTGGACCAAAAATTTTCAGCCATCAATTGGACT...TATACCCTGTCCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR GCA 90 bp | AAAGAAGGGTGGGGGTGGAACAATGTGGAAGAACAGCTCTGGAGACAGCCACCAATCTCCCTAGGATTCTaGAGCAAAGGAATAATTTTT | + |
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Preference number: 4 (lower is better) Translates to: KEGWGWNNVEEQLWRQPPISLGF*SKGIIF Trigger: AAAAATTATTCCTTTGCTGCAGAATCCTAGGGAGAT...TGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTCCACCCCCACCCTTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR GCA 90 bp | AAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACTTGGGACAGGGCTTGTATGTTATTGTTaGCAAGTTTCAGGGTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: KNSSGDSHQYHGVQLGTGLVCYC*QVSGSL Trigger: TAAAGACCCTGAAACTTGGCAACAATAACATACAAG...CCCTGTCCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR CCA 90 bp | TGTAAAGAAGGGTGGGGGTGGAACAATGTGGAAGAACAGCTCTGGAGACAGCCATTCTCTTGCTCTTTCTaGAGAAGCTCTTTAAATCTC | + |
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Preference number: 4 (lower is better) Translates to: CKEGWGWNNVEEQLWRQPFSCSF*RSSLNL Trigger: GAGATTTAAAGAGCTTCTCCAGAAAGAGCAAGAGAA...TGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTCCACCCCCACCCTTCTTTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR CCA 90 bp | TGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACTTGGGACTTAGTCCAGGAGAGTaGTTTGAGTTTAAATTTCTC | + |
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Preference number: 4 (lower is better) Translates to: CGRTALETATSTMVYNLGLSPGE*FEFKFL Trigger: GAGAAATTTAAACTCAAACCACTCTCCTGGACTAAG...TCCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR CCA 90 bp | GTGGAACAATGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACATCCCATACCTGTCTTaGATAATGTGTGTACAATTG | + |
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Preference number: 4 (lower is better) Translates to: VEQCGRTALETATSTMVYIPYLS*IMCVQL Trigger: CAATTGTACACACATTATCCAAGACAGGTATGGGAT...GTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR CCA 90 bp | TCTGGAGACAGCCACCAGTACCATGGTGTACAACTTGGGACAGGGTATACAGGAAAAAATGTCTGTGCATaGGTCCATTGGTTCTGTTTA | + |
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Preference number: 4 (lower is better) Translates to: SGDSHQYHGVQLGTGYTGKNVCA*VHWFCL Trigger: TAAACAGAACCAATGGACCCATGCACAGACATTTTT...TCCTGTATACCCTGTCCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR CCA 90 bp | AAAGAAGGGTGGGGGTGGAACAATGTGGAAGAACAGCTCTGGAGACAGCCACCAGAACACAACAATCTTTaGAGCTTAAAAACAGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: KEGWGWNNVEEQLWRQPPEHNNL*SLKTVR Trigger: TCTGACTGTTTTTAAGCTCCAAAGATTGTTGTGTTC...TGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTCCACCCCCACCCTTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR CCA 90 bp | ACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACTTGGGACAGGGTATAAGATTCTCTTTGGATTaGATAAAATGTCATCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: TALETATSTMVYNLGQGIRFSLD*IKCHPV Trigger: CACTGGATGACATTTTATCCAATCCAAAGAGAATCT...TATACCCTGTCCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR CCA 90 bp | AGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACTTGGGACAGGGTATACAACAAATCTTTCCTCCTaGTTTTCAATTAGACAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SSGDSHQYHGVQLGTGYTTNLSS*FSIRQK Trigger: CTTCTGTCTAATTGAAAACCAGGAGGAAAGATTTGT...TGTATACCCTGTCCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR CCA 90 bp | GAACAATGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACCAGGTATTTCAGTTGTaGTATCTGAAGAAATGTGCA | + |
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Preference number: 4 (lower is better) Translates to: EQCGRTALETATSTMVYNQVFQL*YLKKCA Trigger: TGCACATTTCTTCAGATACCACAACTGAAATACCTG...GTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR TCA 90 bp | ACAATGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACTTACTTTACATTTAGGATaGCACAGAGCTTCACATAAC | + |
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Preference number: 4 (lower is better) Translates to: TMWKNSSGDSHQYHGVQLTLHLG*HRASHN Trigger: GTTATGTGAAGCTCTGTGTCATCCTAAATGTAAAGT...AAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR GCA 90 bp | AACAATGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACTTCTTTAGATTTTTATTaGAAGTCAGGACAGCCGAGA | + |
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Preference number: 4 (lower is better) Translates to: NNVEEQLWRQPPVPWCTTSLDFY*KSGQPR Trigger: TCTCGGCTGTCCTGACTTGCAATAAAAATCTAAAGA...AGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR GCA 90 bp | GAACAATGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACTCAACCCAGGGAAAATaGAAAACATTCAGATTGTTA | + |
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Preference number: 4 (lower is better) Translates to: EQCGRTALETATSTMVYNSTQGK*KTFRLL Trigger: TAACAATCTGAATGTTTTGCATTTTCCCTGGGTTGA...GTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR CAA 90 bp | GAACAATGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACCCTCCACTCGACATGTaGAACATTTCAGAGCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: EQCGRTALETATSTMVYNPPLDM*NISELS Trigger: GCTCAGCTCTGAAATGTTCAACATGTCGAGTGGAGG...GTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR CAA 90 bp | AAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACTTGGGACAGGGTGCCACAAGCCTCACTaGATATGTCACATTTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: KNSSGDSHQYHGVQLGTGCHKPH*ICHIFP Trigger: TGGGAAAATGTGACATATCAAGTGAGGCTTGTGGCA...CCCTGTCCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR CAA 90 bp | GTGGAACAATGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACGAGAGGTCTTTCCTATaGACCTGTAGAAACAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: VEQCGRTALETATSTMVYERSFL*TCRNRF Trigger: GAACCTGTTTCTACAGGTCAATAGGAAAGACCTCTC...GTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS-3UTR CAA 90 bp | ATGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACTTGGGCTCTTCCTCCAATCATaGCACAAGTTTGTCCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: MWKNSSGDSHQYHGVQLGLFLQS*HKFVLS Trigger: ACTCAGGACAAACTTGTGCAATGATTGGAGGAAGAG...CCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
||
| CDS-3UTR CAA 90 bp | TCTGGAGACAGCCACCAGTACCATGGTGTACAACTTGGGACAGGGTATACAGGAACTGCTCAAAACATTTaGTGTTGGCAGCCTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SGDSHQYHGVQLGTGYTGTAQNI*CWQPLP Trigger: AGGAAGAGGCTGCCAACACAAAATGTTTTGAGCAGT...TCCTGTATACCCTGTCCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
||
| CDS-3UTR CAA 90 bp | TGTAAAGAAGGGTGGGGGTGGAACAATGTGGAAGAACAGCTCTGGAGACAGCCAGAAGGTTTTTCAATTTaGAGGCTCGCAGCAGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: CKEGWGWNNVEEQLWRQPEGFSI*RLAADC Trigger: ACAGTCTGCTGCGAGCCTCAAAATTGAAAAACCTTC...TGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTCCACCCCCACCCTTCTTTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
||
| CDS-3UTR CAA 90 bp | TCTGGAGACAGCCACCAGTACCATGGTGTACAACTTGGGACAGGGTATACAGGATCTTCACAACAGTCATaGCTGAGCTCACACATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGDSHQYHGVQLGTGYTGSSQQS*LSSHMS Trigger: AGACATGTGTGAGCTCAGCAATGACTGTTGTGAAGA...TCCTGTATACCCTGTCCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
||
| CDS TCA 90 bp | CACTTTTTGTGGTTCAGAGCCTCACAGAGCATCACCAGCCCAGAGTaGTGCAAGGCATTCCAGTCCAGATTTAAGCTCTTCAATGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HFLWFRASQSITSPE*CKAFQSRFKLFNVL Trigger: CAACACATTGAAGAGCTTAAATCTGGACTGGAATGCCTTGCATCACTCTGGGCTGGTGATGCTCTGTGAGGCTCTGAACCACAAAAAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041845.14 ENSMUST00000085944.6 |
||
| CDS-3UTR CAA 90 bp | TGTAAAGAAGGGTGGGGGTGGAACAATGTGGAAGAACAGCTCTGGAGACAGCCATCAAAACATTTTGTGTaGGCAGCCTCTTCCTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: CKEGWGWNNVEEQLWRQPSKHFV*AASSSN Trigger: ATTGGAGGAAGAGGCTGCCAACACAAAATGTTTTGA...TGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTCCACCCCCACCCTTCTTTACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
||
| CDS-3UTR CAA 90 bp | GAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACTTGGGACAGGCTCATTACACTCTGGTaGACTGAGACTTTTAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: EEQLWRQPPVPWCTTWDRLITLW*TETFKV Trigger: TACCTTAAAAGTCTCAGTCAACCAGAGTGTAATGAG...CCTGTCCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
||
| CDS-3UTR CAA 90 bp | GGTGGAACAATGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTAAGGAGAGAGAGGTGTTaGTTGCTTAAAAGAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GGTMWKNSSGDSHQYHGVRRERC*LLKRAS Trigger: TGAAGCTCTTTTAAGCAACAAACACCTCTCTCTCCT...TACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTCCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
||
| CDS-3UTR CAA 90 bp | TGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACTTGGGAGTCTTTAGATTTTTATaGCAAGTCAGGACAGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: CGRTALETATSTMVYNLGVFRFL*QVRTAE Trigger: CTCGGCTGTCCTGACTTGCAATAAAAATCTAAAGAC...TCCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
||
| CDS-3UTR CAA 90 bp | GGGAGATGTAAAGAAGGGTGGGGGTGGAACAATGTGGAAGAACAGCTCTGGAGAGTGTCTTGTATGTTATaGTTGCCAAGTTTCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GRCKEGWGWNNVEEQLWRVSCML*LPSFRV Trigger: GACCCTGAAACTTGGCAACAATAACATACAAGACAC...TCTCCAGAGCTGTTCTTCCACATTGTTCCACCCCCACCCTTCTTTACATCTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
||
| CDS-3UTR CAA 90 bp | GAACAATGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACGCTTCACATAACCGTTaGACACCAGTGTCTTGTATG | + |
|
Preference number: 5 (lower is better) Translates to: EQCGRTALETATSTMVYNASHNR*TPVSCM Trigger: CATACAAGACACTGGTGTCAAACGGTTATGTGAAGC...GTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
||
| CDS-3UTR CAA 90 bp | TCTGGAGACAGCCACCAGTACCATGGTGTACAACTTGGGACAGGGTATACAGGATTCATCACTGAGTTTTaGAAAATACTGCAGCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGDSHQYHGVQLGTGYTGFITEF*KILQQA Trigger: GGCTTGCTGCAGTATTTTCAAAAACTCAGTGATGAA...TCCTGTATACCCTGTCCCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
||
| CDS-3UTR CAA 90 bp | TGTAAAGAAGGGTGGGGGTGGAACAATGTGGAAGAACAGCTCTGGAGACAGCCAGAGTTTAAATTTCTCTaGCTCTTTCTGGAGAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CKEGWGWNNVEEQLWRQPEFKFL*LFLEKL Trigger: GAGCTTCTCCAGAAAGAGCAAGAGAAATTTAAACTC...TGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTCCACCCCCACCCTTCTTTACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
||
| CDS-3UTR CAA 90 bp | GAACAATGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACGTCCAGGAGAGTGGTTaGAGTTTAAATTTCTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: EQCGRTALETATSTMVYNVQESG*SLNFSC Trigger: GCAAGAGAAATTTAAACTCAAACCACTCTCCTGGAC...GTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
||
| CDS-3UTR CAA 90 bp | GTGGAACAATGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACGGAACACAACAATCTTaGGAGCTTAAAAACAGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VEQCGRTALETATSTMVYGTQQS*ELKNSQ Trigger: CTGACTGTTTTTAAGCTCCAAAGATTGTTGTGTTCC...GTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
||
| CDS-3UTR CAA 90 bp | GGTGGAACAATGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTATATCCCATACCTGTCTaGGATAATGTGTGTACAATT | + |
|
Preference number: 5 (lower is better) Translates to: GGTMWKNSSGDSHQYHGVYPIPV*DNVCTI Trigger: AATTGTACACACATTATCCAAGACAGGTATGGGATA...TACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGTTCCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
||
| CDS-3UTR CAA 90 bp | GGGAGATGTAAAGAAGGGTGGGGGTGGAACAATGTGGAAGAACAGCTCTGGAGAAGAAACATCACTCCTTaGTTCTTCAAGGGATTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GRCKEGWGWNNVEEQLWRRNITP*FFKGFS Trigger: TGAAAATCCCTTGAAGAACAAAGGAGTGATGTTTCT...TCTCCAGAGCTGTTCTTCCACATTGTTCCACCCCCACCCTTCTTTACATCTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
||
| CDS-3UTR CAA 90 bp | AATGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACTTGGTGTTTCACCTTAGAGTaGATAAGGAAAGTTGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: NVEEQLWRQPPVPWCTTWCFTLE*IRKVAI Trigger: AATGGCAACTTTCCTTATCAACTCTAAGGTGAAACA...CCAAGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS TCA 90 bp | CTTAGAGTTGATAAGGAAAGTTGCCATTATGCCACAAGCCTCACTTaGTATGTCACATTTTCCCAACAACAGCTCCTCCACTCGACATGT | + |
|
Preference number: 5 (lower is better) Translates to: LRVDKESCHYATSLT*YVTFSQQQLLHSTC Trigger: ACATGTCGAGTGGAGGAGCTGTTGTTGGGAAAATGTGACATATCAAGTGAGGCTTGTGGCATAATGGCAACTTTCCTTATCAACTCTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041845.14 ENSMUST00000085944.6 |
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| CDS-3UTR CAA 90 bp | AACAATGTGGAAGAACAGCTCTGGAGACAGCCACCAGTACCATGGTGTACAACTTCTTGTATGTTATTGTaGCCAAGTTTCAGGGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: NNVEEQLWRQPPVPWCTTSCMLL*PSFRVF Trigger: AAAGACCCTGAAACTTGGCAACAATAACATACAAGA...AGTTGTACACCATGGTACTGGTGGCTGTCTCCAGAGCTGTTCTTCCACATTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
||
| CDS TCA 90 bp | CACAGCATTCTGAAGTTAAATAGCAACCAGGCAACCATAACTCCTTaGGGGTGCAGTTTGGATATTTCAAAGCTTCACACAGAAGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HSILKLNSNQATITP*GCSLDISKLHTEGS Trigger: TGAACCTTCTGTGTGAAGCTTTGAAATATCCAAACTGCACCCTCAAGGAGTTATGGTTGCCTGGTTGCTATTTAACTTCAGAATGCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS TCA 90 bp | GGAGACAAAGAATTACAGAGGACCTCTATGACCTTTTTATTGAAATaGCAGCTGCCCAGATCCAACACATGTAAGTTACAGAAAAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: GDKELQRTSMTFLLK*QLPRSNTCKLQKRM Trigger: CATTCTTTTCTGTAACTTACATGTGTTGGATCTGGGCAGCTGTCATTTCAATAAAAAGGTCATAGAGGTCCTCTGTAATTCTTTGTCTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS CCA 90 bp | CCCAAGCCAAATATTGATTTGAATGCACTCATGATAAATATCGTGTaGATAGCTGATGTTGATTCACTGGAAGAGATTACTTCCTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PKPNIDLNALMINIV*IADVDSLEEITSSL Trigger: GAGAGAGGAAGTAATCTCTTCCAGTGAATCAACATCAGCTATCCACACGATATTTATCATGAGTGCATTCAAATCAATATTTGGCTTGGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041845.14 ENSMUST00000085944.6 |
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| CDS CCA 90 bp | ACAGAAGAACAACTTCTTGGGATGCACCAGTTTCTCATTACACTCTaGTTGACTGAGACTTTTAAGGTATCTAATGATTTCCTGTCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: TEEQLLGMHQFLITL*LTETFKVSNDFLSY Trigger: ATAAGACAGGAAATCATTAGATACCTTAAAAGTCTCAGTCAACCAGAGTGTAATGAGAAACTGGTGCATCCCAAGAAGTTGTTCTTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041845.14 ENSMUST00000085944.6 |
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| CDS TCA 90 bp | ACACAGAAACATCACTCCTTTGTTCTTCAAGGGATTTTCAACCAATaGGAGATGTTTCACCTTAGAGTTGATAAGGAAAGTTGCCATTAT | + |
|
Preference number: 5 (lower is better) Translates to: TQKHHSFVLQGIFNQ*EMFHLRVDKESCHY Trigger: ATAATGGCAACTTTCCTTATCAACTCTAAGGTGAAACATCTCTCATTGGTTGAAAATCCCTTGAAGAACAAAGGAGTGATGTTTCTGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041845.14 ENSMUST00000085944.6 |
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| CDS CCA 90 bp | CAACAATCTTTGGAGCTTAAAAACAGTCAGAGGCATATTAGGAGTTaGAGACAAAGAATTACAGAGGACCTCTATGACCTTTTTATTGAA | + |
|
Preference number: 5 (lower is better) Translates to: QQSLELKNSQRHIRS*RQRITEDLYDLFIE Trigger: TTCAATAAAAAGGTCATAGAGGTCCTCTGTAATTCTTTGTCTCCAACTCCTAATATGCCTCTGACTGTTTTTAAGCTCCAAAGATTGTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS TCA 72 bp | TGGTTCAGAGCCTCACAGAGCATCACCAGCCCAGAGTaGTGCAAGGCATTCCAGTCCAGATTTAAGCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: WFRASQSITSPE*CKAFQSRFKLF Trigger: GAAGAGCTTAAATCTGGACTGGAATGCCTTGCATCACTCTGGGCTGGTGATGCTCTGTGAGGCTCTGAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041845.14 ENSMUST00000085944.6 |
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| CDS CCA 72 bp | GTGACTTGCCCAAGCATATTCAGTTTACACTTTTTGTaGTTCAGAGCCTCACAGAGCATCACCAGCCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: VTCPSIFSLHFL*FRASQSITSPE Trigger: CTCTGGGCTGGTGATGCTCTGTGAGGCTCTGAACCACAAAAAGTGTAAACTGAATATGCTTGGGCAAGTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041845.14 |
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| CDS CAA 72 bp | GTGATAAGAGCCAATGCCAGGTCTTCACAACAGTCATaGCTGAGCTCACACATGTCTAACCCAAGACACTGC | + |
|
Preference number: 6 (lower is better) Translates to: VIRANARSSQQS*LSSHMSNPRHC Trigger: GCAGTGTCTTGGGTTAGACATGTGTGAGCTCAGCAATGACTGTTGTGAAGACCTGGCATTGGCTCTTATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS CCA 72 bp | TTGTCCAGTCCAAGCATATTCAGTTTACACTTTTTGTaGTTCAGAGCCTCACAGAGCATCACCAGCCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LSSPSIFSLHFL*FRASQSITSPE Trigger: CTCTGGGCTGGTGATGCTCTGTGAGGCTCTGAACCACAAAAAGTGTAAACTGAATATGCTTGGACTGGACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS CAA 72 bp | GTGATAAGAGCCAATGCCAGGTCTTCACAACAGTCATaGCTGAGCTCACACATGTCTAACCATAACTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VIRANARSSQQS*LSSHMSNHNSL Trigger: CAAGGAGTTATGGTTAGACATGTGTGAGCTCAGCAATGACTGTTGTGAAGACCTGGCATTGGCTCTTATCAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041845.14 |
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| CDS CAA 90 bp | TCACAACAGTCATTGCTGAGCTCACACATGTCTAACCATAACTCCTaGAGGGTGCAGTTTGGATATTTCAAAGCTTCACACAGAAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SQQSLLSSHMSNHNS*RVQFGYFKASHRRF Trigger: GAACCTTCTGTGTGAAGCTTTGAAATATCCAAACTGCACCCTCAAGGAGTTATGGTTAGACATGTGTGAGCTCAGCAATGACTGTTGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041845.14 |
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| CDS CAA 72 bp | CTTTCTTTTGTATATGCAGGTGAAGGTTTTTCAATTTaGAGGCTCGCAGCAGACTGTATTCAGCTGCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LSFVYAGEGFSI*RLAADCIQLLP Trigger: TGGGAGCAGCTGAATACAGTCTGCTGCGAGCCTCAAAATTGAAAAACCTTCACCTGCATATACAAAAGAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041845.14 ENSMUST00000085944.6 |
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| CDS CAA 72 bp | AGCAGTAAGACAACATCAGTGATTCCAGAACACAGCTaGGGTCCTTCAGCATTTTACACAGAAACATCACTC | + |
|
Preference number: 6 (lower is better) Translates to: SSKTTSVIPEHS*GPSAFYTETSL Trigger: GAGTGATGTTTCTGTGTAAAATGCTGAAGGACCCAAGCTGTGTTCTGGAATCACTGATGTTGTCTTACTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041845.14 ENSMUST00000085944.6 |
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| CDS CAA 72 bp | TCATTGCTGAGCTCACACATGTCTAACCATAACTCCTaGAGGGTGCAGTTTGGATATTTCAAAGCTTCACAC | + |
|
Preference number: 6 (lower is better) Translates to: SLLSSHMSNHNS*RVQFGYFKASH Trigger: GTGTGAAGCTTTGAAATATCCAAACTGCACCCTCAAGGAGTTATGGTTAGACATGTGTGAGCTCAGCAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041845.14 |
||
| CDS GCA 72 bp | AATTTGATCCCAGATCAAGGAGAGAGAGGTGTTTGTTaGTTAAAAGAGCTTCATAGAGATGTCCACAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: NLIPDQGERGVC*LKELHRDVHRQ Trigger: TTGCCTGTGGACATCTCTATGAAGCTCTTTTAAGCAACAAACACCTCTCTCTCCTTGATCTGGGATCAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041845.14 ENSMUST00000085944.6 |
||
| CDS CAA 72 bp | GTAGAAACAGGTTCAACACCATATCCCATACCTGTCTaGGATAATGTGTGTACAATTGCGTTACCAGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VETGSTPYPIPV*DNVCTIALPGL Trigger: AAGACCTGGTAACGCAATTGTACACACATTATCCAAGACAGGTATGGGATATGGTGTTGAACCTGTTTCTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041845.14 ENSMUST00000085944.6 |
||
| CDS TCA 72 bp | ACACTGTCTTATCAGATTCAGATATCTTATTCCTCCTaGGGTCCTCAGAGTCAAACACATATACCTGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TLSYQIQISYSS*GPQSQTHIPVS Trigger: GGAAACAGGTATATGTGTTTGACTCTGAGGACCTCAGGAGGAATAAGATATCTGAATCTGATAAGACAGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041845.14 ENSMUST00000085944.6 |
||
| CDS TCA 72 bp | GAATTACAGAGGACCTCTATGACCTTTTTATTGAAATaGCAGCTGCCCAGATCCAACACATGTAAGTTACAG | + |
|
Preference number: 6 (lower is better) Translates to: ELQRTSMTFLLK*QLPRSNTCKLQ Trigger: CTGTAACTTACATGTGTTGGATCTGGGCAGCTGTCATTTCAATAAAAAGGTCATAGAGGTCCTCTGTAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
||
| CDS CAA 72 bp | ACAGCCAAGGTGCACAGGGTCTTTAATTTGAACCTCTaGTATTTAGATGAGCCCAAGCCAAATATTGATTTG | + |
|
Preference number: 6 (lower is better) Translates to: TAKVHRVFNLNL*YLDEPKPNIDL Trigger: CAAATCAATATTTGGCTTGGGCTCATCTAAATACAAGAGGTTCAAATTAAAGACCCTGTGCACCTTGGCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041845.14 ENSMUST00000085944.6 |
||
| CDS CAA 72 bp | CTTCTTGGGATGCACCAGTTTCTCATTACACTCTGGTaGACTGAGACTTTTAAGGTATCTAATGATTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLGMHQFLITLW*TETFKVSNDFL Trigger: CAGGAAATCATTAGATACCTTAAAAGTCTCAGTCAACCAGAGTGTAATGAGAAACTGGTGCATCCCAAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041845.14 ENSMUST00000085944.6 |
||
| CDS CAA 90 bp | TTCTTCAAGGGATTTTCAACCAATGAGAGATGTTTCACCTTAGAGTaGATAAGGAAAGTTGCCATTATGCCACAAGCCTCACTTGATATG | + |
|
Preference number: 6 (lower is better) Translates to: FFKGFSTNERCFTLE*IRKVAIMPQASLDM Trigger: CATATCAAGTGAGGCTTGTGGCATAATGGCAACTTTCCTTATCAACTCTAAGGTGAAACATCTCTCATTGGTTGAAAATCCCTTGAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041845.14 ENSMUST00000085944.6 |
||
| CDS CAA 90 bp | TCCACAGCTTGCAGAAATGTCTGTGATTCCTCAGAAAATGAAGATTaGTCCAGTCCAAGCATATTCAGTTTACACTTTTTGTGGTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: STACRNVCDSSENED*SSPSIFSLHFLWFR Trigger: TCTGAACCACAAAAAGTGTAAACTGAATATGCTTGGACTGGACAAATCTTCATTTTCTGAGGAATCACAGACATTTCTGCAAGCTGTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
||
| CDS TCA 72 bp | TTCTTGGGATGCACCAGTTTCTCATTACACTCTGGTTaGCTGAGACTTTTAAGGTATCTAATGATTTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: FLGCTSFSLHSG*LRLLRYLMISC Trigger: ACAGGAAATCATTAGATACCTTAAAAGTCTCAGTCAACCAGAGTGTAATGAGAAACTGGTGCATCCCAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041845.14 ENSMUST00000085944.6 |
||
| CDS CCA 72 bp | CAACTTCTTGGGATGCACCAGTTTCTCATTACACTCTaGTTGACTGAGACTTTTAAGGTATCTAATGATTTC | + |
|
Preference number: 6 (lower is better) Translates to: QLLGMHQFLITL*LTETFKVSNDF Trigger: GAAATCATTAGATACCTTAAAAGTCTCAGTCAACCAGAGTGTAATGAGAAACTGGTGCATCCCAAGAAGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041845.14 ENSMUST00000085944.6 |
||
| CDS CAA 72 bp | CTTAGTCCAGGAGAGTGGTTTGAGTTTAAATTTCTCTaGCTCTTTCTGGAGAAGCTCTTTAAATCTCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LSPGEWFEFKFL*LFLEKLFKSLE Trigger: TTCCAGAGATTTAAAGAGCTTCTCCAGAAAGAGCAAGAGAAATTTAAACTCAAACCACTCTCCTGGACTAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041845.14 ENSMUST00000085944.6 |
||
| CDS CAA 72 bp | TTGGAAGTGTTCTTAATCTTAGTCCAGGAGAGTGGTTaGAGTTTAAATTTCTCTTGCTCTTTCTGGAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: LEVFLILVQESG*SLNFSCSFWRS Trigger: GCTTCTCCAGAAAGAGCAAGAGAAATTTAAACTCAAACCACTCTCCTGGACTAAGATTAAGAACACTTCCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041845.14 ENSMUST00000085944.6 |
||
| CDS CAA 90 bp | CAAATTTCAGGTAATCAAATCCATCCAGAACAAACAAGATTCTCTTaGGATTGGATAAAATGTCATCCAGTGTCTCAGAACACTCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: QISGNQIHPEQTRFS*DWIKCHPVSQNTQA Trigger: TGCCTGAGTGTTCTGAGACACTGGATGACATTTTATCCAATCCAAAGAGAATCTTGTTTGTTCTGGATGGATTTGATTACCTGAAATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041845.14 ENSMUST00000085944.6 |
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| CDS CAA 90 bp | GAAGAACAACTTCTTGGGATGCACCAGTTTCTCATTACACTCTGGTaGACTGAGACTTTTAAGGTATCTAATGATTTCCTGTCTTATTGT | + |
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Preference number: 6 (lower is better) Translates to: EEQLLGMHQFLITLW*TETFKVSNDFLSYC Trigger: ACAATAAGACAGGAAATCATTAGATACCTTAAAAGTCTCAGTCAACCAGAGTGTAATGAGAAACTGGTGCATCCCAAGAAGTTGTTCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041845.14 ENSMUST00000085944.6 |
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| CDS CCA 72 bp | TTCTTTGGAAGTGTTCTTAATCTTAGTCCAGGAGAGTaGTTTGAGTTTAAATTTCTCTTGCTCTTTCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: FFGSVLNLSPGE*FEFKFLLLFLE Trigger: CTCCAGAAAGAGCAAGAGAAATTTAAACTCAAACCACTCTCCTGGACTAAGATTAAGAACACTTCCAAAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041845.14 ENSMUST00000085944.6 |
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| CDS CCA 72 bp | GAACCATCTCCAAAGTTAGTCATGAAGGAACACTTTTaGTCCAGTTTAAAGTTTTCTAAGCTACCATATTCG | + |
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Preference number: 6 (lower is better) Translates to: EPSPKLVMKEHF*SSLKFSKLPYS Trigger: CGAATATGGTAGCTTAGAAAACTTTAAACTGGACCAAAAGTGTTCCTTCATGACTAACTTTGGAGATGGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041845.14 |
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| CDS CAA 72 bp | CCGCACTGCATTAATTCTTGTTCTAATAAAGGTGACTaGCCCAAGCATATTCAGTTTACACTTTTTGTGGTT | + |
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Preference number: 6 (lower is better) Translates to: PHCINSCSNKGD*PKHIQFTLFVV Trigger: AACCACAAAAAGTGTAAACTGAATATGCTTGGGCAAGTCACCTTTATTAGAACAAGAATTAATGCAGTGCGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041845.14 |
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| CDS CAA 72 bp | ATCTCCAAAGTTAGTCATGAAGGAACACAACAATCTTaGGAGCTTAAAAACAGTCAGAGGCATATTAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: ISKVSHEGTQQS*ELKNSQRHIRS Trigger: ACTCCTAATATGCCTCTGACTGTTTTTAAGCTCCAAAGATTGTTGTGTTCCTTCATGACTAACTTTGGAGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085944.6 |
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| CDS CAA 90 bp | TGCCCCCACATTAAAGAACTACAGATCATCCACAACATACTAGGATaGCTGCATAAAGTAAACAATGGTTCGTTTTTCTTTAAATCCTTA | + |
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Preference number: 6 (lower is better) Translates to: CPHIKELQIIHNILG*LHKVNNGSFFFKSL Trigger: TAAGGATTTAAAGAAAAACGAACCATTGTTTACTTTATGCAGCAATCCTAGTATGTTGTGGATGATCTGTAGTTCTTTAATGTGGGGGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041845.14 ENSMUST00000085944.6 |
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| CDS CAA 72 bp | CTCTTGTATTTAGATGAGCCCAAGCCAAATATTGATTaGAATGCACTCATGATAAATATCGTGTGGATAGCT | + |
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Preference number: 6 (lower is better) Translates to: LLYLDEPKPNID*NALMINIVWIA Trigger: AGCTATCCACACGATATTTATCATGAGTGCATTCAAATCAATATTTGGCTTGGGCTCATCTAAATACAAGAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041845.14 ENSMUST00000085944.6 |
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