Pregenerated sensors for NLRP9A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054102Ensembl transcript IDs: ENSMUST00000071780.10, ENSMUST00000108387.9, ENSMUST00000117252.4, ENSMUST00000122040.7, ENSMUST00000153452.8
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGATATAAAGAAAGGTGGGGGTGGAACAATGTGGAAGAACAGCTCTaGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTA | + |
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Preference number: 1 (lower is better) Translates to: RYKERWGWNNVEEQL*RQPPVPWCATWDRV Trigger: TACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTCCACCCCCACCTTTCTTTATATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| 3UTR CCA 72 bp | GAAAGGTGGGGGTGGAACAATGTGGAAGAACAGCTCTaGCGACAGCCACCAGTACCATGGTGTGCAACTTGG | + |
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Preference number: 3 (lower is better) Translates to: ERWGWNNVEEQL*RQPPVPWCATW Trigger: CCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTCCACCCCCACCTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| 3UTR CCA 72 bp | AGGGGAGATATAAAGAAAGGTGGGGGTGGAACAATGTaGAAGAACAGCTCTGGCGACAGCCACCAGTACCAT | + |
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Preference number: 3 (lower is better) Translates to: RGDIKKGGGGTM*KNSSGDSHQYH Trigger: ATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTCCACCCCCACCTTTCTTTATATCTCCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| 3UTR CCA 72 bp | ACATTGCAAAGTGGTGAGGGGAGATATAAAGAAAGGTaGGGGTGGAACAATGTGGAAGAACAGCTCTGGCGA | + |
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Preference number: 3 (lower is better) Translates to: TLQSGEGRYKER*GWNNVEEQLWR Trigger: TCGCCAGAGCTGTTCTTCCACATTGTTCCACCCCCACCTTTCTTTATATCTCCCCTCACCACTTTGCAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR TCA 90 bp | CTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTATATAGGTCTCTCCTTTCTGTCTaGGCCATGGTTGAGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LWRQPPVPWCATWDRVYRSLLSV*AMVERS Trigger: AGACCTCTCAACCATGGCTCAGACAGAAAGGAGAGA...CCTATATACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR TCA 90 bp | GAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGCACAACAGTCACTGGTaGAGTCACACATGTCTAACC | + |
|
Preference number: 4 (lower is better) Translates to: EEQLWRQPPVPWCATWDRHNSHW*SHTCLT Trigger: GGTTAGACATGTGTGACTTCACCAGTGACTGTTGTG...CCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR TCA 90 bp | GGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGAGGTTACAGGCTTTGTaGTTCAAGGCCTTACAGAGC | + |
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Preference number: 4 (lower is better) Translates to: GRTALATATSTMVCNLGQRLQAL*FKALQS Trigger: GCTCTGTAAGGCCTTGAATCACAAAGCCTGTAACCT...CTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR TCA 90 bp | GAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTCTCTCCTTTCTGTCTaGGCCATGGTTGAGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EQCGRTALATATSTMVCNSLLSV*AMVERS Trigger: AGACCTCTCAACCATGGCTCAGACAGAAAGGAGAGA...GTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR TCA 90 bp | GAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTACTGATACAACTACAGTaGCTGGCTCTGACTCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: EQLWRQPPVPWCATWDRVLIQLQ*LALTHN Trigger: ATTGTGAGTCAGAGCCAGTCACTGTAGTTGTATCAG...TACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR TCA 90 bp | CAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTATATGTAAGACAACATCAGTaGTTCCAGGACACAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLWRQPPVPWCATWDRVYVRQHQ*FQDTAW Trigger: CCAAGCTGTGTCCTGGAATCACTGATGTTGTCTTAC...ATATACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR TCA 90 bp | CAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTATATCACAACAGTCACTGGTaGAGTCACACATGTCTAACC | + |
|
Preference number: 4 (lower is better) Translates to: QLWRQPPVPWCATWDRVYHNSHW*SHTCLT Trigger: GGTTAGACATGTGTGACTTCACCAGTGACTGTTGTG...ATATACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR GCA 90 bp | GGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGGAAGCTGCAATTATaGCACAAGCCTCACTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: GRTALATATSTMVCNLGQGKLQL*HKPHLI Trigger: TATCAAGTGAGGCTTGTGGCATAATTGCAGCTTCCC...CTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR CCA 90 bp | GAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTACCTGTCTTACCTCCTTaGATGATATACAGCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EQLWRQPPVPWCATWDRVPVLPP*MIYSQS Trigger: GCTTTGGCTGTATATCATCCAAGGAGGTAAGACAGG...TACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR CCA 90 bp | GGTGGAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGATCTCCAGCCCAGAATaGTCAAAGGCATTCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGTMWKNSSGDSHQYHGVISSPE*SKAFQS Trigger: TGACTGGAATGCCTTTGACCATTCTGGGCTGGAGAT...CACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTCCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR CCA 90 bp | ATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGATCTCCAGCCCAGAATaGTCAAAGGCATTCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MWKNSSGDSHQYHGVQLGISSPE*SKAFQS Trigger: TGACTGGAATGCCTTTGACCATTCTGGGCTGGAGAT...CCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR TCA 90 bp | GAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTATACAGTGACTGGCTCTaGCTCACAATCAAATATGTC | + |
|
Preference number: 4 (lower is better) Translates to: EQLWRQPPVPWCATWDRVYSDWL*LTIKYV Trigger: GACATATTTGATTGTGAGTCAGAGCCAGTCACTGTA...TACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR TCA 90 bp | CAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTATATGCCACAAGCCTCACTTaGTATGTCACATTTTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QLWRQPPVPWCATWDRVYATSLT*YVTFSQ Trigger: TTGGGAAAATGTGACATATCAAGTGAGGCTTGTGGC...ATATACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR TCA 90 bp | AACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTATGCCACAAGCCTCACTTaGTATGTCACATTTTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NSSGDSHQYHGVQLGTGYATSLT*YVTFSQ Trigger: TTGGGAAAATGTGACATATCAAGTGAGGCTTGTGGC...ATACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR TCA 90 bp | GAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACGTAAGACAACATCAGTaGTTCCAGGACACAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EQCGRTALATATSTMVCNVRQHQ*FQDTAW Trigger: CCAAGCTGTGTCCTGGAATCACTGATGTTGTCTTAC...GTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR TCA 90 bp | CAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGTCTTCCAGGAAATTTaGCCCCAGATCAAGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QCGRTALATATSTMVCNLVFQEI*PQIKQR Trigger: TCTCTGCTTGATCTGGGGTCAAATTTCCTGGAAGAC...CAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR TCA 90 bp | GGAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAAGTCTTCCAGGAAATTTaGCCCCAGATCAAGCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: GTMWKNSSGDSHQYHGVQVFQEI*PQIKQR Trigger: TCTCTGCTTGATCTGGGGTCAAATTTCCTGGAAGAC...TTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR TCA 90 bp | AATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGAGGTTACAGGCTTTGTaGTTCAAGGCCTTACAGAGC | + |
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Preference number: 4 (lower is better) Translates to: NVEEQLWRQPPVPWCATWRLQAL*FKALQS Trigger: GCTCTGTAAGGCCTTGAATCACAAAGCCTGTAACCT...CCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR GCA 90 bp | GAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTATCATCACTGAGCTTTTaGAAATACTGCAGCAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EQLWRQPPVPWCATWDRVSSLSF*KYCSKP Trigger: TGGCTTGCTGCAGTATTTGCAAAAGCTCAGTGATGA...TACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR CCA 90 bp | GAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTACAAGACAATTTGTATTaGCAGCTTCTTCCTCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: EQLWRQPPVPWCATWDRVQDNLY*QLLPPV Trigger: GACTGGAGGAAGAAGCTGCCAATACAAATTGTCTTG...TACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR CCA 90 bp | AACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTATTTCCAGGACACAGCTTaGATCCTTCAGCATTTCACA | + |
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Preference number: 4 (lower is better) Translates to: NSSGDSHQYHGVQLGTGYFQDTA*ILQHFT Trigger: TGTGAAATGCTGAAGGATCCAAGCTGTGTCCTGGAA...ATACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR TCA 90 bp | GGTGGAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGTACAGTGACTGGCTCTaGCTCACAATCAAATATGTC | + |
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Preference number: 4 (lower is better) Translates to: GGTMWKNSSGDSHQYHGVYSDWL*LTIKYV Trigger: GACATATTTGATTGTGAGTCAGAGCCAGTCACTGTA...CACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR TCA 90 bp | GGTGGAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGTTTCCAATAACTGGGTaGCGTGTGTCTTTGTATTGG | + |
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Preference number: 4 (lower is better) Translates to: GGTMWKNSSGDSHQYHGVFPITG*RVSLYW Trigger: CCAATACAAAGACACACGTCACCCAGTTATTGGAAA...CACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR TCA 90 bp | CAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTATATCTTCACATAACCGTTTaGCACCAGTGTCTTGTATGT | + |
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Preference number: 4 (lower is better) Translates to: QLWRQPPVPWCATWDRVYLHITV*HQCLVC Trigger: ACATACAAGACACTGGTGTCAAACGGTTATGTGAAG...ATATACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR TCA 90 bp | GGGTGGAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTCTTCACATAACCGTTTaGCACCAGTGTCTTGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: GWNNVEEQLWRQPPVPWCLHITV*HQCLVC Trigger: ACATACAAGACACTGGTGTCAAACGGTTATGTGAAG...ACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTCCACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR GCA 90 bp | GGAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAAGGGAAGCTGCAATTATaGCACAAGCCTCACTTGATA | + |
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Preference number: 4 (lower is better) Translates to: GTMWKNSSGDSHQYHGVQGKLQL*HKPHLI Trigger: TATCAAGTGAGGCTTGTGGCATAATTGCAGCTTCCC...TTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR GCA 90 bp | GAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGTTCTTTTCCACAGCTTaGAGTAATGTCTGTGATTCC | + |
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Preference number: 4 (lower is better) Translates to: EEQLWRQPPVPWCATWDRFFSTA*SNVCDS Trigger: GGAATCACAGACATTACTGCAAGCTGTGGAAAAGAA...CCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR CCA 90 bp | GAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGTGCAATGCTCTGTACTaGACTTCTATAAATTCGTGG | + |
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Preference number: 4 (lower is better) Translates to: EEQLWRQPPVPWCATWDRCNALY*TSINSW Trigger: CCACGAATTTATAGAAGTCCAGTACAGAGCATTGCA...CCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR CCA 90 bp | CAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGTTCCAGGACACAGCTTaGATCCTTCAGCATTTCACA | + |
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Preference number: 4 (lower is better) Translates to: QCGRTALATATSTMVCNLFQDTA*ILQHFT Trigger: TGTGAAATGCTGAAGGATCCAAGCTGTGTCCTGGAA...CAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR CCA 90 bp | ATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGCTTGAGGGTGCAGTTTaGATCTTTCAAAGCTTCACA | + |
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Preference number: 4 (lower is better) Translates to: MWKNSSGDSHQYHGVQLGLEGAV*IFQSFT Trigger: TGTGAAGCTTTGAAAGATCCAAACTGCACCCTCAAG...CCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR CCA 90 bp | GAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTAGAACACAACAATCTGTaGAGCTTAAAACCAGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: EQLWRQPPVPWCATWDRVEHNNL*SLKPVR Trigger: TCTGACTGGTTTTAAGCTCCACAGATTGTTGTGTTC...TACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108387.9 |
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| CDS-3UTR TCA 90 bp | GAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTATGTGATATTGTTAAGTaGGAAGACGGAGAAGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: EQLWRQPPVPWCATWDRVCDIVK*EDGEVE Trigger: TTCTACTTCTCCGTCTTCTCACTTAACAATATCACA...TACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR TCA 90 bp | AACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTATTTGTTCAGAGAATCCTaGCATAATTATCTCCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: NSSGDSHQYHGVQLGTGYLFRES*HNYLPW Trigger: CCAAGGGAGATAATTATGTCAGGATTCTCTGAACAA...ATACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR TCA 90 bp | CAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTATATTTGTTCAGAGAATCCTaGCATAATTATCTCCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: QLWRQPPVPWCATWDRVYLFRES*HNYLPW Trigger: CCAAGGGAGATAATTATGTCAGGATTCTCTGAACAA...ATATACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR TCA 90 bp | GGAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAATTTCCAATAACTGGGTaGCGTGTGTCTTTGTATTGG | + |
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Preference number: 4 (lower is better) Translates to: GTMWKNSSGDSHQYHGVQFPITG*RVSLYW Trigger: CCAATACAAAGACACACGTCACCCAGTTATTGGAAA...TTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR TCA 90 bp | GGAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAAGGGATTTTCAACCAATaGGAGATGTTTCACCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: GTMWKNSSGDSHQYHGVQGIFNQ*EMFHLR Trigger: TCTGAGGTGAAACATCTCTCATTGGTTGAAAATCCC...TTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR TCA 90 bp | GAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACGCTTTTTCATTGAAATaGCAGCTGTCCAGATCCAAC | + |
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Preference number: 4 (lower is better) Translates to: EQCGRTALATATSTMVCNAFSLK*QLSRSN Trigger: GTTGGATCTGGACAGCTGTCATTTCAATGAAAAAGC...GTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108387.9 |
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| CDS-3UTR TCA 90 bp | GGGTGGAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTCTATGGCTTTTTCATTaGAATGACAGCTGTCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GWNNVEEQLWRQPPVPWCLWLFH*NDSCPD Trigger: ATCTGGACAGCTGTCATTTCAATGAAAAAGCCATAG...ACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTCCACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108387.9 |
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| CDS-3UTR GCA 90 bp | GAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTCATCACTGAGCTTTTaGAAATACTGCAGCAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: EQCGRTALATATSTMVCNSSLSF*KYCSKP Trigger: TGGCTTGCTGCAGTATTTGCAAAAGCTCAGTGATGA...GTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR GCA 90 bp | CTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTATATAGGTCTTTAGATTTGTATTaGAAGTCAGGACAGCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LWRQPPVPWCATWDRVYRSLDLY*KSGQPR Trigger: TCTCGGCTGTCCTGACTTGCAATACAAATCTAAAGA...CCTATATACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CCA 90 bp | GAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACCAAGACAATTTGTATTaGCAGCTTCTTCCTCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EQCGRTALATATSTMVCNQDNLY*QLLPPV Trigger: GACTGGAGGAAGAAGCTGCCAATACAAATTGTCTTG...GTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CCA 90 bp | GGTGGAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGTATACAGCCAAAGCATaGTTCAAGCAAGGAGTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: GGTMWKNSSGDSHQYHGVYTAKA*FKQGVN Trigger: GTTAACTCCTTGCTTGAACCATGCTTTGGCTGTATA...CACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CCA 90 bp | AACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTATTATACAGCCAAAGCATaGTTCAAGCAAGGAGTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: NSSGDSHQYHGVQLGTGYYTAKA*FKQGVN Trigger: GTTAACTCCTTGCTTGAACCATGCTTTGGCTGTATA...ATACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CCA 90 bp | CAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTATATCAGAAAAACAAATTCTaGGGATGCACCACCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QLWRQPPVPWCATWDRVYQKNKF*GCTTSF Trigger: AAAACTGGTGGTGCATCCCCAGAATTTGTTTTTCTG...ATATACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CCA 90 bp | CTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTATATAGGCAGAAAAACAAATTCTaGGGATGCACCACCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LWRQPPVPWCATWDRVYRQKNKF*GCTTSF Trigger: AAAACTGGTGGTGCATCCCCAGAATTTGTTTTTCTG...CCTATATACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CCA 90 bp | GGAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGAGGGTGCAGTTTaGATCTTTCAAAGCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: GTMWKNSSGDSHQYHGVQLEGAV*IFQSFT Trigger: TGTGAAGCTTTGAAAGATCCAAACTGCACCCTCAAG...TTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR TCA 90 bp | AACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTATATTCCTGGCATATGTTaGTTTAAATGCGCTAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: NSSGDSHQYHGVQLGTGYIPGIC*FKCANH Trigger: ATGGTTAGCGCATTTAAATCAACATATGCCAGGAAT...ATACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR TCA 90 bp | AACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTGGGATTTTCAACCAATaGGAGATGTTTCACCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NNVEEQLWRQPPVPWCATGIFNQ*EMFHLR Trigger: TCTGAGGTGAAACATCTCTCATTGGTTGAAAATCCC...AGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR GCA 90 bp | TGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGAAAATATGTCCTGCAATaGTCTGTACTGGACTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: CGRTALATATSTMVCNLGKYVLQ*SVLDFY Trigger: ATAGAAGTCCAGTACAGAGCATTGCAGGACATATTT...TCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR GCA 90 bp | GGAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACAATCAAATATGTCCTaGAATGCTCTGTACTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GTMWKNSSGDSHQYHGVQQSNMS*NALYWT Trigger: AGTCCAGTACAGAGCATTGCAGGACATATTTGATTG...TTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR GCA 90 bp | AATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGTCTTTAGATTTGTATTaGAAGTCAGGACAGCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NVEEQLWRQPPVPWCATWSLDLY*KSGQPR Trigger: TCTCGGCTGTCCTGACTTGCAATACAAATCTAAAGA...CCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR GCA 90 bp | CAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGTTCTTTTCCACAGCTTaGAGTAATGTCTGTGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: QCGRTALATATSTMVCNLFFSTA*SNVCDS Trigger: GGAATCACAGACATTACTGCAAGCTGTGGAAAAGAA...CAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGAAGTTTAAATTTCTCTaGCTCTTTCCTGAGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRTALATATSTMVCNLGQKFKFL*LFPEMF Trigger: GAACATCTCAGGAAAGAGCCAGAGAAATTTAAACTT...CTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CCA 90 bp | CTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTATATAGGCAGGTATATAAGTGTTaGTCTCCATTGTCCATATGT | + |
|
Preference number: 4 (lower is better) Translates to: LWRQPPVPWCATWDRVYRQVYKC*SPLSIC Trigger: ACATATGGACAATGGAGACCAACACTTATATACCTG...CCTATATACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CCA 90 bp | AATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGTGCAATGCTCTGTACTaGACTTCTATAAATTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NVEEQLWRQPPVPWCATWCNALY*TSINSW Trigger: CCACGAATTTATAGAAGTCCAGTACAGAGCATTGCA...CCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CCA 90 bp | GAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTACATAATTATCTCCCTTaGATATTGCAGCAAAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: EQLWRQPPVPWCATWDRVHNYLP*ILQQRN Trigger: ATTCCTTTGCTGCAATATCCAAGGGAGATAATTATG...TACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGATTTCTACACCTGTCTaGGTATTAAAGAAAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: GRTALATATSTMVCNLGQISTPV*VLKKDT Trigger: TGTGTCTTTCTTTAATACCCAGACAGGTGTAGAAAT...CTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGACAAATCTTTCCTCCTaGTTGTCAAGTATACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GRTALATATSTMVCNLGQTNLSS*LSSIQK Trigger: TTTCTGTATACTTGACAACCAGGAGGAAAGATTTGT...CTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR TCA 90 bp | AATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGTGTGATATTGTTAAGTaGGAAGACGGAGAAGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NVEEQLWRQPPVPWCATWCDIVK*EDGEVE Trigger: TTCTACTTCTCCGTCTTCTCACTTAACAATATCACA...CCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR TCA 90 bp | GAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACATTCCTGGCATATGTTaGTTTAAATGCGCTAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: EQCGRTALATATSTMVCNIPGIC*FKCANH Trigger: ATGGTTAGCGCATTTAAATCAACATATGCCAGGAAT...GTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR TCA 90 bp | GAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACACAATATGGAGTTGCTaGCATATCATCAACATCACT | + |
|
Preference number: 4 (lower is better) Translates to: EQCGRTALATATSTMVCNTIWSC*HIINIT Trigger: AGTGATGTTGATGATATGTCAGCAACTCCATATTGT...GTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR TCA 90 bp | CAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGACAATATGGAGTTGCTaGCATATCATCAACATCACT | + |
|
Preference number: 4 (lower is better) Translates to: QCGRTALATATSTMVCNLTIWSC*HIINIT Trigger: AGTGATGTTGATGATATGTCAGCAACTCCATATTGT...CAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR GCA 90 bp | GGAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAAAAATATGTCCTGCAATaGTCTGTACTGGACTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: GTMWKNSSGDSHQYHGVQKYVLQ*SVLDFY Trigger: ATAGAAGTCCAGTACAGAGCATTGCAGGACATATTT...TTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR GCA 90 bp | AACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTATATCTCCCTTGGATATTaGAGCAAAGGAATAATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NSSGDSHQYHGVQLGTGYISLGY*SKGIMF Trigger: AAACATTATTCCTTTGCTGCAATATCCAAGGGAGAT...ATACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CCA 90 bp | CAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTATATAAGTTTAAATTTCTCTaGCTCTTTCCTGAGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLWRQPPVPWCATWDRVYKFKFL*LFPEMF Trigger: GAACATCTCAGGAAAGAGCCAGAGAAATTTAAACTT...ATATACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CCA 90 bp | ATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGCATAATTATCTCCCTTaGATATTGCAGCAAAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: MWKNSSGDSHQYHGVQLGHNYLP*ILQQRN Trigger: ATTCCTTTGCTGCAATATCCAAGGGAGATAATTATG...CCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CCA 90 bp | CTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTATATAGGACAAATCTTTCCTCCTaGTTGTCAAGTATACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LWRQPPVPWCATWDRVYRTNLSS*LSSIQK Trigger: TTTCTGTATACTTGACAACCAGGAGGAAAGATTTGT...CCTATATACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR GCA 90 bp | CAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGATCTCCCTTGGATATTaGAGCAAAGGAATAATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QCGRTALATATSTMVCNLISLGY*SKGIMF Trigger: AAACATTATTCCTTTGCTGCAATATCCAAGGGAGAT...CAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CAA 90 bp | GAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTAGAGAGGTCTTCCCGATaGACCTGTAGAAACAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: EQLWRQPPVPWCATWDRVERSSR*TCRNRL Trigger: GAGCCTGTTTCTACAGGTCAATCGGGAAGACCTCTC...TACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CAA 90 bp | GGAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAAGAGAGGTCTTCCCGATaGACCTGTAGAAACAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GTMWKNSSGDSHQYHGVQERSSR*TCRNRL Trigger: GAGCCTGTTTCTACAGGTCAATCGGGAAGACCTCTC...TTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CAA 90 bp | GAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTATTCTTCCTCCAGTCATaGCACAGGTTTGTCCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: EQLWRQPPVPWCATWDRVFFLQS*HRFVLS Trigger: ACTCAGGACAAACCTGTGCAATGACTGGAGGAAGAA...TACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CAA 90 bp | GAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTATTCATCACTGAGCTTTaGCAAATACTGCAGCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EQLWRQPPVPWCATWDRVFITEL*QILQQA Trigger: GGCTTGCTGCAGTATTTGCAAAAGCTCAGTGATGAA...TACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CAA 90 bp | ATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGTTCTTCCTCCAGTCATaGCACAGGTTTGTCCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: MWKNSSGDSHQYHGVQLGFFLQS*HRFVLS Trigger: ACTCAGGACAAACCTGTGCAATGACTGGAGGAAGAA...CCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CAA 90 bp | GAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGTCCTGTCTTACCTCCTaGGATGATATACAGCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: EEQLWRQPPVPWCATWDRSCLTS*DDIQPK Trigger: CTTTGGCTGTATATCATCCAAGGAGGTAAGACAGGA...CCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CAA 90 bp | AACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTATCCTCCACTCCACATGTaGAAAATTTCAGAGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: NSSGDSHQYHGVQLGTGYPPLHM*KISELS Trigger: GCTCAGCTCTGAAATTTTCAACATGTGGAGTGGAGG...ATACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CAA 90 bp | GGGTGGAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTTGTCTTCCAGGAAATTaGACCCCAGATCAAGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GWNNVEEQLWRQPPVPWCCLPGN*TPDQAE Trigger: CTCTGCTTGATCTGGGGTCAAATTTCCTGGAAGACA...ACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTCCACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CAA 90 bp | GGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGAAGCTCTTCAATGTGTaGCAGGTGGTAAGAACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GRTALATATSTMVCNLGQKLFNV*QVVRTK Trigger: CTTGGTTCTTACCACCTGCAACACATTGAAGAGCTT...CTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CAA 90 bp | GGTGGAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGTCCTGTCTTACCTCCTaGGATGATATACAGCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GGTMWKNSSGDSHQYHGVSCLTS*DDIQPK Trigger: CTTTGGCTGTATATCATCCAAGGAGGTAAGACAGGA...CACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CAA 90 bp | CAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGCCTCCACTCCACATGTaGAAAATTTCAGAGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QCGRTALATATSTMVCNLPPLHM*KISELS Trigger: GCTCAGCTCTGAAATTTTCAACATGTGGAGTGGAGG...CAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CAA 90 bp | AATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGTGTCTTCCAGGAAATTaGACCCCAGATCAAGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: NVEEQLWRQPPVPWCATWCLPGN*TPDQAE Trigger: CTCTGCTTGATCTGGGGTCAAATTTCCTGGAAGACA...CCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CAA 90 bp | GGTGGAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGGTCTTTAGATTTGTATaGCAAGTCAGGACAGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: GGTMWKNSSGDSHQYHGVVFRFV*QVRTAE Trigger: CTCGGCTGTCCTGACTTGCAATACAAATCTAAAGAC...CACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CAA 90 bp | GGGTGGAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTAAGCTCTTCAATGTGTaGCAGGTGGTAAGAACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GWNNVEEQLWRQPPVPWCKLFNV*QVVRTK Trigger: CTTGGTTCTTACCACCTGCAACACATTGAAGAGCTT...ACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTCCACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
||
| CDS-3UTR CAA 90 bp | GGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGCTTAACTCTGTGATATaGTTAAGTGAGAAGACGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GRTALATATSTMVCNLGQLNSVI*LSEKTE Trigger: CTCCGTCTTCTCACTTAACAATATCACAGAGTTAAG...CTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR CAA 90 bp | TGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGATCAAGACAATTTGTATaGGCAGCTTCTTCCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: CGRTALATATSTMVCNLGSRQFV*AASSSS Trigger: ACTGGAGGAAGAAGCTGCCAATACAAATTGTCTTGA...TCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR CAA 90 bp | GAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGCAGACAATATGGAGTaGCTGACATATCATCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: EEQLWRQPPVPWCATWDRADNME*LTYHQH Trigger: ATGTTGATGATATGTCAGCAACTCCATATTGTCTGC...CCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR CAA 90 bp | AATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGTCTTTAGATTTGTATaGCAAGTCAGGACAGCCGAG | + |
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Preference number: 5 (lower is better) Translates to: NVEEQLWRQPPVPWCATWVFRFV*QVRTAE Trigger: CTCGGCTGTCCTGACTTGCAATACAAATCTAAAGAC...CCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS TCA 90 bp | TATCTCTCCTTTCTGTCTGAGCCATGGTTGAGAGGTCTTCCCGATTaGCCTGTAGAAACAGGCTCAACACCATATCCCATGCCTTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: YLSFLSEPWLRGLPD*PVETGSTPYPMPFL Trigger: CAGGAAAGGCATGGGATATGGTGTTGAGCCTGTTTCTACAGGTCAATCGGGAAGACCTCTCAACCATGGCTCAGACAGAAAGGAGAGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000117252.4 ENSMUST00000122040.7 |
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| CDS-3UTR CAA 90 bp | AACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTTCATCACTGAGCTTTaGCAAATACTGCAGCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: NNVEEQLWRQPPVPWCATFITEL*QILQQA Trigger: GGCTTGCTGCAGTATTTGCAAAAGCTCAGTGATGAA...AGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR CAA 90 bp | GGTGGAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGTCTGCAGTAAATTTCTaGATGCCCAATCCAACATTG | + |
|
Preference number: 5 (lower is better) Translates to: GGTMWKNSSGDSHQYHGVSAVNF*MPNPTL Trigger: CAATGTTGGATTGGGCATCAAGAAATTTACTGCAGA...CACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR CAA 90 bp | AATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGTCAAGACAATTTGTATaGGCAGCTTCTTCCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: NVEEQLWRQPPVPWCATWSRQFV*AASSSS Trigger: ACTGGAGGAAGAAGCTGCCAATACAAATTGTCTTGA...CCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR CAA 90 bp | GAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGACAGGGTAAATCTTTCCTCCTGGTaGTCAAGTATACAGAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: EQLWRQPPVPWCATWDRVNLSSW*SSIQKN Trigger: GTTTTTCTGTATACTTGACAACCAGGAGGAAAGATT...TACCCTGTCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR CAA 90 bp | GGTGGAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGGCAGACAATATGGAGTaGCTGACATATCATCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: GGTMWKNSSGDSHQYHGVADNME*LTYHQH Trigger: ATGTTGATGATATGTCAGCAACTCCATATTGTCTGC...CACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTCCACC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR CAA 90 bp | GAACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACCTTAACTCTGTGATATaGTTAAGTGAGAAGACGGAG | + |
|
Preference number: 5 (lower is better) Translates to: EQCGRTALATATSTMVCNLNSVI*LSEKTE Trigger: CTCCGTCTTCTCACTTAACAATATCACAGAGTTAAG...GTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTTC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR CAA 90 bp | ATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGTATCTCCCTTGGATATaGCAGCAAAGGAATAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: MWKNSSGDSHQYHGVQLGYLPWI*QQRNNV Trigger: AACATTATTCCTTTGCTGCAATATCCAAGGGAGATA...CCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR CAA 90 bp | TGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTGGGAAATCTTTCCTCCTGGTaGTCAAGTATACAGAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: CGRTALATATSTMVCNLGNLSSW*SSIQKN Trigger: GTTTTTCTGTATACTTGACAACCAGGAGGAAAGATT...TCCCAAGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS-3UTR CAA 90 bp | AACAATGTGGAAGAACAGCTCTGGCGACAGCCACCAGTACCATGGTGTGCAACTTATCTCCCTTGGATATaGCAGCAAAGGAATAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: NNVEEQLWRQPPVPWCATYLPWI*QQRNNV Trigger: AACATTATTCCTTTGCTGCAATATCCAAGGGAGATA...AGTTGCACACCATGGTACTGGTGGCTGTCGCCAGAGCTGTTCTTCCACATTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 |
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| CDS GCA 90 bp | TTGGATGATATACAGCCAAAGCATGGTTCAAGCAAGGAGTTAACTTaGTCAGTGGCCATTCCAAACAATAATATCCGTGTGTGGAACCAT | + |
|
Preference number: 5 (lower is better) Translates to: LDDIQPKHGSSKELT*SVAIPNNNIRVWNH Trigger: ATGGTTCCACACACGGATATTATTGTTTGGAATGGCCACTGAGCAAGTTAACTCCTTGCTTGAACCATGCTTTGGCTGTATATCATCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000117252.4 ENSMUST00000122040.7 ENSMUST00000153452.8 |
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| CDS GCA 90 bp | CTTGTATGTTATTGTTGCCAAGTTTCAGGGTCTTTAGATTTGTATTaGAAGTCAGGACAGCCGAGATCTCTTCACAACATTCTGAAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: LVCYCCQVSGSLDLY*KSGQPRSLHNILKL Trigger: TAACTTCAGAATGTTGTGAAGAGATCTCGGCTGTCCTGACTTGCAATACAAATCTAAAGACCCTGAAACTTGGCAACAATAACATACAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000122040.7 |
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| CDS CCA 90 bp | AGTTTAAATTTCTCTGGCTCTTTCCTGAGATGTTCTTTAAATCTCTaGAACTCTTCATCACTGAGCTTTTGCAAATACTGCAGCAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLNFSGSFLRCSLNL*NSSSLSFCKYCSKP Trigger: TGGCTTGCTGCAGTATTTGCAAAAGCTCAGTGATGAAGAGTTCCAGAGATTTAAAGAACATCTCAGGAAAGAGCCAGAGAAATTTAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000117252.4 ENSMUST00000122040.7 |
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| CDS TCA 72 bp | TTTCTGTCTGAGCCATGGTTGAGAGGTCTTCCCGATTaGCCTGTAGAAACAGGCTCAACACCATATCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: FLSEPWLRGLPD*PVETGSTPYPM Trigger: CATGGGATATGGTGTTGAGCCTGTTTCTACAGGTCAATCGGGAAGACCTCTCAACCATGGCTCAGACAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000117252.4 ENSMUST00000122040.7 |
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| CDS CAA 72 bp | CACATTTTCCCAACAACAGCTCCTCCACTCCACATGTaGAAAATTTCAGAGCTGAGCACAGCCTCTCAACTG | + |
|
Preference number: 6 (lower is better) Translates to: HIFPTTAPPLHM*KISELSTASQL Trigger: CAGTTGAGAGGCTGTGCTCAGCTCTGAAATTTTCAACATGTGGAGTGGAGGAGCTGTTGTTGGGAAAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000117252.4 ENSMUST00000122040.7 ENSMUST00000153452.8 |
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| CDS TCA 72 bp | GATAAGGGAAGCTGCAATTATGCCACAAGCCTCACTTaGTATGTCACATTTTCCCAACAACAGCTCCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: DKGSCNYATSLT*YVTFSQQQLLH Trigger: GTGGAGGAGCTGTTGTTGGGAAAATGTGACATATCAAGTGAGGCTTGTGGCATAATTGCAGCTTCCCTTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000117252.4 ENSMUST00000122040.7 ENSMUST00000153452.8 |
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| CDS CAA 72 bp | AGCAGTAAGACAACATCAGTGATTCCAGGACACAGCTaGGATCCTTCAGCATTTCACACAGTGACATCACTC | + |
|
Preference number: 6 (lower is better) Translates to: SSKTTSVIPGHS*DPSAFHTVTSL Trigger: GAGTGATGTCACTGTGTGAAATGCTGAAGGATCCAAGCTGTGTCCTGGAATCACTGATGTTGTCTTACTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000117252.4 ENSMUST00000122040.7 ENSMUST00000153452.8 |
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| CDS TCA 72 bp | GCAGCTTCTTCCTCCAGTCATTGCACAGGTTTGTCCTaGGTTCCAAGTCAAATTTCAGGTAATCAAATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: AASSSSHCTGLS*VPSQISGNQIH Trigger: ATGGATTTGATTACCTGAAATTTGACTTGGAACTCAGGACAAACCTGTGCAATGACTGGAGGAAGAAGCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000117252.4 ENSMUST00000122040.7 ENSMUST00000153452.8 |
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| CDS TCA 72 bp | CTGAAGTTAAATAGCAACCAGGCAACCATAACTCCTTaGGGGTGCAGTTTGGATCTTTCAAAGCTTCACACA | + |
|
Preference number: 6 (lower is better) Translates to: LKLNSNQATITP*GCSLDLSKLHT Trigger: TGTGTGAAGCTTTGAAAGATCCAAACTGCACCCTCAAGGAGTTATGGTTGCCTGGTTGCTATTTAACTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000122040.7 |
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| CDS GCA 72 bp | TCTTTAAATCTCTGGAACTCTTCATCACTGAGCTTTTaGAAATACTGCAGCAAGCCATACCCAGATGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLNLWNSSSLSF*KYCSKPYPDES Trigger: GGACTCATCTGGGTATGGCTTGCTGCAGTATTTGCAAAAGCTCAGTGATGAAGAGTTCCAGAGATTTAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000117252.4 ENSMUST00000122040.7 |
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| CDS GCA 72 bp | ACAGTGACTGGCTCTGACTCACAATCAAATATGTCCTaGAATGCTCTGTACTGGACTTCTATAAATTCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TVTGSDSQSNMS*NALYWTSINSW Trigger: CCACGAATTTATAGAAGTCCAGTACAGAGCATTGCAGGACATATTTGATTGTGAGTCAGAGCCAGTCACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000117252.4 ENSMUST00000122040.7 ENSMUST00000153452.8 |
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| CDS GCA 72 bp | ATACAGCCAAAGCATGGTTCAAGCAAGGAGTTAACTTaGTCAGTGGCCATTCCAAACAATAATATCCGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: IQPKHGSSKELT*SVAIPNNNIRV Trigger: CACACGGATATTATTGTTTGGAATGGCCACTGAGCAAGTTAACTCCTTGCTTGAACCATGCTTTGGCTGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000117252.4 ENSMUST00000122040.7 ENSMUST00000153452.8 |
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| CDS CAA 72 bp | TGCAGTAATGTCTGTGATTCCTCAGAAAATAAAGATTaGTCCAGTCCAAGCACCTCCAGGTTACAGGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: CSNVCDSSENKD*SSPSTSRLQAL Trigger: CAAAGCCTGTAACCTGGAGGTGCTTGGACTGGACAAATCTTTATTTTCTGAGGAATCACAGACATTACTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000117252.4 ENSMUST00000122040.7 |
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| CDS CAA 90 bp | ACACAGCTTGGATCCTTCAGCATTTCACACAGTGACATCACTCCTTaGTTCTTCAAGGGATTTTCAACCAATGAGAGATGTTTCACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: TQLGSFSISHSDITP*FFKGFSTNERCFTS Trigger: TGAGGTGAAACATCTCTCATTGGTTGAAAATCCCTTGAAGAACAAAGGAGTGATGTCACTGTGTGAAATGCTGAAGGATCCAAGCTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000117252.4 ENSMUST00000122040.7 ENSMUST00000153452.8 |
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| CDS TCA 72 bp | TCTTTGTATTTAGTTTGTTTATCTCTCCTTTCTGTCTaGGCCATGGTTGAGAGGTCTTCCCGATTGACCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SLYLVCLSLLSV*AMVERSSRLTC Trigger: ACAGGTCAATCGGGAAGACCTCTCAACCATGGCTCAGACAGAAAGGAGAGATAAACAAACTAAATACAAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000117252.4 ENSMUST00000122040.7 |
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| CDS TCA 72 bp | GATGTATCTGATGATTTCCTGTCTTACCTCCTTGGATaGTATACAGCCAAAGCATGGTTCAAGCAAGGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: DVSDDFLSYLLG*YTAKAWFKQGV Trigger: AACTCCTTGCTTGAACCATGCTTTGGCTGTATATCATCCAAGGAGGTAAGACAGGAAATCATCAGATACATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000117252.4 ENSMUST00000122040.7 ENSMUST00000153452.8 |
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| CDS CAA 72 bp | GGATCCTTCAGCATTTCACACAGTGACATCACTCCTTaGTTCTTCAAGGGATTTTCAACCAATGAGAGATGT | + |
|
Preference number: 6 (lower is better) Translates to: GSFSISHSDITP*FFKGFSTNERC Trigger: ACATCTCTCATTGGTTGAAAATCCCTTGAAGAACAAAGGAGTGATGTCACTGTGTGAAATGCTGAAGGATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000117252.4 ENSMUST00000122040.7 ENSMUST00000153452.8 |
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| CDS CAA 90 bp | TTCTTCAAGGGATTTTCAACCAATGAGAGATGTTTCACCTCAGAATaGATAAGGGAAGCTGCAATTATGCCACAAGCCTCACTTGATATG | + |
|
Preference number: 6 (lower is better) Translates to: FFKGFSTNERCFTSE*IREAAIMPQASLDM Trigger: CATATCAAGTGAGGCTTGTGGCATAATTGCAGCTTCCCTTATCAATTCTGAGGTGAAACATCTCTCATTGGTTGAAAATCCCTTGAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000117252.4 ENSMUST00000122040.7 ENSMUST00000153452.8 |
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| CDS TCA 72 bp | ACACTTTCTTATCTGATTCAGATATCCCATTCCTCCTaGGGTCATCAGAGTCAAACACATATACCTGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TLSYLIQISHSS*GHQSQTHIPVS Trigger: GGAAACAGGTATATGTGTTTGACTCTGATGACCTCAGGAGGAATGGGATATCTGAATCAGATAAGAAAGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000117252.4 ENSMUST00000122040.7 ENSMUST00000153452.8 |
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| CDS GCA 72 bp | TATTGTTGCCAAGTTTCAGGGTCTTTAGATTTGTATTaGAAGTCAGGACAGCCGAGATCTCTTCACAACATT | + |
|
Preference number: 6 (lower is better) Translates to: YCCQVSGSLDLY*KSGQPRSLHNI Trigger: AATGTTGTGAAGAGATCTCGGCTGTCCTGACTTGCAATACAAATCTAAAGACCCTGAAACTTGGCAACAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000122040.7 |
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| CDS CCA 72 bp | TCCTCCTGGTTGTCAAGTATACAGAAAAACAAATTCTaGGGATGCACCACCAGTTTTTCATTGCATTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SSWLSSIQKNKF*GCTTSFSLHSC Trigger: ACAAGAATGCAATGAAAAACTGGTGGTGCATCCCCAGAATTTGTTTTTCTGTATACTTGACAACCAGGAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000117252.4 ENSMUST00000122040.7 ENSMUST00000153452.8 |
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| CDS CAA 72 bp | CTTTTGATGTATCTGATGATTTCCTGTCTTACCTCCTaGGATGATATACAGCCAAAGCATGGTTCAAGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LLMYLMISCLTS*DDIQPKHGSSK Trigger: CTTGCTTGAACCATGCTTTGGCTGTATATCATCCAAGGAGGTAAGACAGGAAATCATCAGATACATCAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000117252.4 ENSMUST00000122040.7 ENSMUST00000153452.8 |
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| CDS TCA 72 bp | TGCCACTTTATAGTACTACAGATCATCCAGCATAGATaGGGACAGCGGCATAAATTGAACAATGGTTTAATG | + |
|
Preference number: 6 (lower is better) Translates to: CHFIVLQIIQHR*GQRHKLNNGLM Trigger: CATTAAACCATTGTTCAATTTATGCCGCTGTCCTCATCTATGCTGGATGATCTGTAGTACTATAAAGTGGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000117252.4 ENSMUST00000122040.7 ENSMUST00000153452.8 |
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| CDS TCA 72 bp | CACTTTTGGGGCTCTATGCAGACAATATGGAGTTGCTaGCATATCATCAACATCACTAATATCAACAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: HFWGSMQTIWSC*HIINITNINSH Trigger: ATGACTGTTGATATTAGTGATGTTGATGATATGTCAGCAACTCCATATTGTCTGCATAGAGCCCCAAAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000117252.4 ENSMUST00000122040.7 ENSMUST00000153452.8 |
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| CDS TCA 72 bp | CAATTACAGAGAACCTCTATGGCTTTTTCATTGAAATaGCAGCTGTCCAGATCCAACACATGTAAGTTACAG | + |
|
Preference number: 6 (lower is better) Translates to: QLQRTSMAFSLK*QLSRSNTCKLQ Trigger: CTGTAACTTACATGTGTTGGATCTGGACAGCTGTCATTTCAATGAAAAAGCCATAGAGGTTCTCTGTAATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108387.9 ENSMUST00000153452.8 |
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| CDS TCA 72 bp | GCAAACAATTACAGAGAACCTCTATGGCTTTTTCATTaGAATGACAGCTGTCCAGATCCAACACATGTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: ANNYREPLWLFH*NDSCPDPTHVS Trigger: ACTTACATGTGTTGGATCTGGACAGCTGTCATTTCAATGAAAAAGCCATAGAGGTTCTCTGTAATTGTTTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108387.9 ENSMUST00000153452.8 |
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| CDS CAA 72 bp | CGATCCATCAATTGTCTTACAAATCTTTCCTCCTGGTaGTCAAGTATACAGAAAAACAAATTCTGGGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: RSINCLTNLSSW*SSIQKNKFWGC Trigger: GCATCCCCAGAATTTGTTTTTCTGTATACTTGACAACCAGGAGGAAAGATTTGTAAGACAATTGATGGATCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000117252.4 ENSMUST00000122040.7 ENSMUST00000153452.8 |
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| CDS TCA 72 bp | CACACAGTAGATTTCTATAGTTTGTTCAGAGAATCCTaGCATAATTATCTCCCTTGGATATTGCAGCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: HTVDFYSLFRES*HNYLPWILQQR Trigger: CCTTTGCTGCAATATCCAAGGGAGATAATTATGTCAGGATTCTCTGAACAAACTATAGAAATCTACTGTGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000117252.4 ENSMUST00000122040.7 ENSMUST00000153452.8 |
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| CDS GCA 72 bp | TCAGAGAATCCTGACATAATTATCTCCCTTGGATATTaGAGCAAAGGAATAATGTTTGAAAGACTTGCATTT | + |
|
Preference number: 6 (lower is better) Translates to: SENPDIIISLGY*SKGIMFERLAF Trigger: AAATGCAAGTCTTTCAAACATTATTCCTTTGCTGCAATATCCAAGGGAGATAATTATGTCAGGATTCTCTGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071780.10 ENSMUST00000108387.9 ENSMUST00000117252.4 ENSMUST00000122040.7 ENSMUST00000153452.8 |
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