Pregenerated sensors for NLRP5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015721Ensembl transcript IDs: ENSMUST00000015866.14, ENSMUST00000086341.12, ENSMUST00000108441.8, ENSMUST00000133237.2, ENSMUST00000139661.8
Found 422 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACTTACATGCCCCCAACCCAAGTCTCCTCAGGGAGCTGCTACTTTaGTTCAGTCCCTCACACAGGGTTATGACTCCTTTGTCACCCAGG | + |
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Preference number: 1 (lower is better) Translates to: NLHAPNPSLLRELLL*FSPSHRVMTPLSPR Trigger: CCTGGGTGACAAAGGAGTCATAACCCTGTGTGAGGGACTGAAGCAAAGTAGCAGCTCCCTGAGGAGACTTGGGTTGGGGGCATGTAAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR CCA 90 bp | GGTGAGGGTTGCAAGAGATGGCCAATGACAATGCCTCACAGCAATTaGAAGTCAACTTACATGCCCCCAACCCAAGTCTCCTCAGGGAGC | + |
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Preference number: 1 (lower is better) Translates to: GEGCKRWPMTMPHSN*KSTYMPPTQVSSGS Trigger: GCTCCCTGAGGAGACTTGGGTTGGGGGCATGTAAGTTGACTTCCAATTGCTGTGAGGCATTGTCATTGGCCATCTCTTGCAACCCTCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR TCA 90 bp | CAGGGCATTGGAACGCAGAGCACAGCTTCAACATCCCCGATGTACTaGAGTCATTCTTCACCAGGTTTAGGCTGTTCAGGTGAGGGTTGC | + |
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Preference number: 1 (lower is better) Translates to: QGIGTQSTASTSPMY*SHSSPGLGCSGEGC Trigger: GCAACCCTCACCTGAACAGCCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAAGCTGTGCTCTGCGTTCCAATGCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| 3UTR TCA 90 bp | TTCAGTATCAGCCGCTGGAGAGCACATTCTGGATTCCTCAGGAACTaGCACAGCTGTTGCACTCCTTCAGTCCCCAGGCTGTTGTTTGAC | + |
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Preference number: 1 (lower is better) Translates to: FSISRWRAHSGFLRN*HSCCTPSVPRLLFD Trigger: GTCAAACAACAGCCTGGGGACTGAAGGAGTGCAACAGCTGTGTCAGTTCCTGAGGAATCCAGAATGTGCTCTCCAGCGGCTGATACTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR CCA 90 bp | CGGTCATCTTCATCACTAGCATACCAATCACCATCAATCACCACGTaGGGCTTGACAAACTCAACTTCCTCCAGCTGTCTTCTCACTCGG | + |
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Preference number: 1 (lower is better) Translates to: RSSSSLAYQSPSITT*GLTNSTSSSCLLTR Trigger: CCGAGTGAGAAGACAGCTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGATGGTGATTGGTATGCTAGTGATGAAGATGACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| 3UTR TCA 90 bp | CCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGCTGTTCAGGTaGGGGTTGCAAGAGATGGCCAATGACAATGCCTCACAGCAATTG | + |
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Preference number: 1 (lower is better) Translates to: PDVLKSFFTRFRLFR*GLQEMANDNASQQL Trigger: CAATTGCTGTGAGGCATTGTCATTGGCCATCTCTTGCAACCCTCACCTGAACAGCCTAAACCTGGTGAAGAATGACTTCAGTACATCGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| 3UTR GCA 90 bp | TACGGGGTTCATGGTCAGGCTCAGGTGGGTCAGCTTTGTGTTGTTTaGAAGTCTCATTGCCAGGAAGCCATAAGCATCATCTACAATGTT | + |
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Preference number: 1 (lower is better) Translates to: YGVHGQAQVGQLCVV*KSHCQEAISIIYNV Trigger: AACATTGTAGATGATGCTTATGGCTTCCTGGCAATGAGACTTGCAAACAACACAAAGCTGACCCACCTGAGCCTGACCATGAACCCCGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR GCA 90 bp | TTGCAAGTCTCATTGCCAGGAAGCCATAAGCATCATCTACAATGTTaGAGTGATTCAGTATCAGCCGCTGGAGAGCACATTCTGGATTCC | + |
|
Preference number: 1 (lower is better) Translates to: LQVSLPGSHKHHLQC*SDSVSAAGEHILDS Trigger: GGAATCCAGAATGTGCTCTCCAGCGGCTGATACTGAATCACTGCAACATTGTAGATGATGCTTATGGCTTCCTGGCAATGAGACTTGCAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR CCA 90 bp | CATTCTTCACCAGGTTTAGGCTGTTCAGGTGAGGGTTGCAAGAGATaGCCAATGACAATGCCTCACAGCAATTGGAAGTCAACTTACATG | + |
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Preference number: 1 (lower is better) Translates to: HSSPGLGCSGEGCKR*PMTMPHSNWKSTYM Trigger: CATGTAAGTTGACTTCCAATTGCTGTGAGGCATTGTCATTGGCCATCTCTTGCAACCCTCACCTGAACAGCCTAAACCTGGTGAAGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCCTCAGGAACTGACACAGCTGTTGCACTCCTTCAGTCCCCAGGCTGTTGTTGGCAGCTGGCAGGTGTaGGGCCACAGTTGTCCAGTC | + |
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Preference number: 2 (lower is better) Translates to: IPQELTQLLHSFSPQAVVGSWQV*GHSCPV Trigger: GACTGGACAACTGTGGCCTCACACCTGCCAGCTGCC...AACAACAGCCTGGGGACTGAAGGAGTGCAACAGCTGTGTCAGTTCCTGAGGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTCACAGCAATTGGAAGTCAACTTACATGCCCCCAACCCAAGTCTCCTCAGGTGCAGTGCTAGGACGTaGAGGAGAGGGGGCTCATGT | + |
|
Preference number: 2 (lower is better) Translates to: ASQQLEVNLHAPNPSLLRCSART*RRGGSC Trigger: ACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCA...CCTGAGGAGACTTGGGTTGGGGGCATGTAAGTTGACTTCCAATTGCTGTGAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR-3UTR GCA 90 bp | TTGCACCATCCCCTACGGGGTTCATGGTCAGGCTCAGGTGGGTCAGCTTTGTGTGCCAGACACTACCTCTaGACTCTTAAACCCCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: LHHPLRGSWSGSGGSALCARHYL*TLKPQA Trigger: AGCCTGGGGTTTAAGAGTGCAGAGGTAGTGTCTGGC...ACACAAAGCTGACCCACCTGAGCCTGACCATGAACCCCGTAGGGGATGGTGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR-3UTR TCA 90 bp | CCAATCACCATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGCTGTGCAGTGCTAGGACGTaGAGGAGAGGGGGCTCATGT | + |
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Preference number: 2 (lower is better) Translates to: PITINHHVGLDKLNFLQLCSART*RRGGSC Trigger: ACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCA...CAGCTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGATGGTGATTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| 3UTR CAA 90 bp | CACCATCCCCTACGGGGTTCATGGTCAGGCTCAGGTGGGTCAGCTTaGTGTTGTTTGCAAGTCTCATTGCCAGGAAGCCATAAGCATCAT | + |
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Preference number: 2 (lower is better) Translates to: HHPLRGSWSGSGGSA*CCLQVSLPGSHKHH Trigger: ATGATGCTTATGGCTTCCTGGCAATGAGACTTGCAAACAACACAAAGCTGACCCACCTGAGCCTGACCATGAACCCCGTAGGGGATGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR-3UTR TCA 90 bp | CCAATCACCATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGCTGTTTAGGCTGTTCAGGTaGGGGTTGCAAGAGATGGCC | + |
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Preference number: 2 (lower is better) Translates to: PITINHHVGLDKLNFLQLFRLFR*GLQEMA Trigger: GGCCATCTCTTGCAACCCTCACCTGAACAGCCTAAA...CAGCTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGATGGTGATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| 3UTR-3UTR TCA 90 bp | AATGCCTCACAGCAATTGGAAGTCAACTTACATGCCCCCAACCCAAGTCTCCTCGTTGCTGAAAAGGGCTaGGACCAGAAGGTGGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: NASQQLEVNLHAPNPSLLVAEKG*DQKVAA Trigger: AGCTGCCACCTTCTGGTCTCAGCCCTTTTCAGCAAC...GAGGAGACTTGGGTTGGGGGCATGTAAGTTGACTTCCAATTGCTGTGAGGCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCACCACGTGGGGCTTaGCAAACTCAACTTCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: TDTAVLGREGEGAHVFSFSPRGA*QTQLPP Trigger: TGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGA...AAAACTGAAGACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| 3UTR-3UTR TCA 90 bp | CCAATCACCATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGCTGGCAAGAGATGGCCAATaGCAATGCCTCACAGCAATT | + |
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Preference number: 2 (lower is better) Translates to: PITINHHVGLDKLNFLQLARDGQ*QCLTAI Trigger: AATTGCTGTGAGGCATTGTCATTGGCCATCTCTTGC...CAGCTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGATGGTGATTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| 3UTR-3UTR TCA 90 bp | TTGCACCATCCCCTACGGGGTTCATGGTCAGGCTCAGGTGGGTCAGCTTTGTGTGAGTGTTCCCTAGATTaGGGTACTTTAAGTTTTGAT | + |
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Preference number: 2 (lower is better) Translates to: LHHPLRGSWSGSGGSALCECSLD*GTLSFD Trigger: ATCAAAACTTAAAGTACCTCAATCTAGGGAACACTC...ACACAAAGCTGACCCACCTGAGCCTGACCATGAACCCCGTAGGGGATGGTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCAAGTTCTGGTTGCTaGAAAGGGCTGAGACCAGAA | + |
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Preference number: 2 (lower is better) Translates to: TDTAVLGREGEGAHVFSFSSSGC*KGLRPE Trigger: TTCTGGTCTCAGCCCTTTTCAGCAACCAGAACTTGA...AAAACTGAAGACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGAGCACAGCTTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTGCAAGAGATGGCCAATaGCAATGCCTCACAGCAATT | + |
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Preference number: 2 (lower is better) Translates to: AEHSFNIPDVLKSFFTRFARDGQ*QCLTAI Trigger: AATTGCTGTGAGGCATTGTCATTGGCCATCTCTTGC...AAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAAGCTGTGCTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| 3UTR-3UTR GCA 90 bp | GATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCTGTTTATTTCATTCTTaGTACATCCTCCAAGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: DTAVLGREGEGAHVFSFSCLFHS*YILQGE Trigger: CTCACCTTGGAGGATGTAGCAAGAATGAAATAAACA...GGAAAAACTGAAGACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| 3UTR-3UTR TCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAATGCAGTGCTAGGACGTaGAGGAGAGGGGGCTCATGT | + |
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Preference number: 2 (lower is better) Translates to: FSKCCVYFILATSSKVRQCSART*RRGGSC Trigger: ACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCA...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| 3UTR-3UTR TCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTTGCAGTGCTAGGACGTaGAGGAGAGGGGGCTCATGT | + |
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Preference number: 2 (lower is better) Translates to: KCCVYFILATSSKVRQTFCSART*RRGGSC Trigger: ACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCA...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| 3UTR-3UTR GCA 90 bp | TACCAATCACCATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGCTGTTTATTTCATTCTTaGTACATCCTCCAAGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: YQSPSITTWGLTNSTSSSCLFHS*YILQGE Trigger: CTCACCTTGGAGGATGTAGCAAGAATGAAATAAACA...GCTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGATGGTGATTGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACCTACATCCTCCAAGGTaGGACAAACATTTCACAGAT | + |
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Preference number: 2 (lower is better) Translates to: CCVYFILATSSKVRQTFHLHPPR*DKHFTD Trigger: ATCTGTGAAATGTTTGTCTCACCTTGGAGGATGTAG...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACTGTTTATTTCATTCTTaGTACATCCTCCAAGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: CCVYFILATSSKVRQTFHCLFHS*YILQGE Trigger: CTCACCTTGGAGGATGTAGCAAGAATGAAATAAACA...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| 3UTR GCA 72 bp | GCCCCCAACCCAAGTCTCCTCAGGGAGCTGCTACTTTaGTTCAGTCCCTCACACAGGGTTATGACTCCTTTG | + |
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Preference number: 3 (lower is better) Translates to: APNPSLLRELLL*FSPSHRVMTPL Trigger: CAAAGGAGTCATAACCCTGTGTGAGGGACTGAAGCAAAGTAGCAGCTCCCTGAGGAGACTTGGGTTGGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR TCA 72 bp | TGTTTGACAGGCACAGGTGTGTCAAGTTCTGGTTGCTaGAAAGGGCTGAGACCAGAAGGTGGCAGCTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: CLTGTGVSSSGC*KGLRPEGGSWQ Trigger: CTGCCAGCTGCCACCTTCTGGTCTCAGCCCTTTTCAGCAACCAGAACTTGACACACCTGTGCCTGTCAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR TCA 72 bp | CAGCTGTTGCACTCCTTCAGTCCCCAGGCTGTTGTTTaGCAGGCACAGGTGTGTCAAGTTCTGGTTGCTGAA | + |
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Preference number: 3 (lower is better) Translates to: QLLHSFSPQAVV*QAQVCQVLVAE Trigger: TTCAGCAACCAGAACTTGACACACCTGTGCCTGTCAAACAACAGCCTGGGGACTGAAGGAGTGCAACAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR CCA 72 bp | AGGCTGTTGTTTGACAGGCACAGGTGTGTCAAGTTCTaGTTGCTGAAAAGGGCTGAGACCAGAAGGTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: RLLFDRHRCVKF*LLKRAETRRWQ Trigger: CTGCCACCTTCTGGTCTCAGCCCTTTTCAGCAACCAGAACTTGACACACCTGTGCCTGTCAAACAACAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR CCA 72 bp | GCAGTGATTCAGTATCAGCCGCTGGAGAGCACATTCTaGATTCCTCAGGAACTGACACAGCTGTTGCACTCC | + |
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Preference number: 3 (lower is better) Translates to: AVIQYQPLESTF*IPQELTQLLHS Trigger: GGAGTGCAACAGCTGTGTCAGTTCCTGAGGAATCCAGAATGTGCTCTCCAGCGGCTGATACTGAATCACTGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR TCA 72 bp | GGAACGCAGAGCACAGCTTCAACATCCCCGATGTACTaGAGTCATTCTTCACCAGGTTTAGGCTGTTCAGGT | + |
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Preference number: 3 (lower is better) Translates to: GTQSTASTSPMY*SHSSPGLGCSG Trigger: ACCTGAACAGCCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAAGCTGTGCTCTGCGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| 3UTR GCA 72 bp | CATGGTCAGGCTCAGGTGGGTCAGCTTTGTGTTGTTTaGAAGTCTCATTGCCAGGAAGCCATAAGCATCATC | + |
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Preference number: 3 (lower is better) Translates to: HGQAQVGQLCVV*KSHCQEAISII Trigger: GATGATGCTTATGGCTTCCTGGCAATGAGACTTGCAAACAACACAAAGCTGACCCACCTGAGCCTGACCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR CCA 72 bp | TGCAAGAGATGGCCAATGACAATGCCTCACAGCAATTaGAAGTCAACTTACATGCCCCCAACCCAAGTCTCC | + |
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Preference number: 3 (lower is better) Translates to: CKRWPMTMPHSN*KSTYMPPTQVS Trigger: GGAGACTTGGGTTGGGGGCATGTAAGTTGACTTCCAATTGCTGTGAGGCATTGTCATTGGCCATCTCTTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR CCA 72 bp | CCAGGTTTAGGCTGTTCAGGTGAGGGTTGCAAGAGATaGCCAATGACAATGCCTCACAGCAATTGGAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: PGLGCSGEGCKR*PMTMPHSNWKS Trigger: TGACTTCCAATTGCTGTGAGGCATTGTCATTGGCCATCTCTTGCAACCCTCACCTGAACAGCCTAAACCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR GCA 72 bp | CATTCTTCACCAGGTTTAGGCTGTTCAGGTGAGGGTTaGAAGAGATGGCCAATGACAATGCCTCACAGCAAT | + |
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Preference number: 3 (lower is better) Translates to: HSSPGLGCSGEG*KRWPMTMPHSN Trigger: ATTGCTGTGAGGCATTGTCATTGGCCATCTCTTGCAACCCTCACCTGAACAGCCTAAACCTGGTGAAGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| 3UTR GCA 72 bp | CCCAGGGCGTTGTTACCAAGATCCAAACTTTTTAAGTaGTTGGTTGTTGTGATCATACAGGCCAGGTCCTCG | + |
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Preference number: 3 (lower is better) Translates to: PRALLPRSKLFK*LVVVIIQARSS Trigger: CGAGGACCTGGCCTGTATGATCACAACAACCAAGCACTTAAAAAGTTTGGATCTTGGTAACAACGCCCTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR CCA 72 bp | TCATCACTAGCATACCAATCACCATCAATCACCACGTaGGGCTTGACAAACTCAACTTCCTCCAGCTGTCTT | + |
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Preference number: 3 (lower is better) Translates to: SSLAYQSPSITT*GLTNSTSSSCL Trigger: AAGACAGCTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGATGGTGATTGGTATGCTAGTGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| 3UTR-3UTR CAA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACTCCCCAGGCTGTTGTTaGACAGGCACAGGTGTGTCA | + |
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Preference number: 3 (lower is better) Translates to: CCVYFILATSSKVRQTFHSPGCC*TGTGVS Trigger: TGACACACCTGTGCCTGTCAAACAACAGCCTGGGGA...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR TCA 72 bp | TACCAAGATCCAAACTTTTTAAGTGCTTGGTTGTTGTaGTCATACAGGCCAGGTCCTCGCAGCAGTTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: YQDPNFLSAWLL*SYRPGPRSSSV Trigger: CACAGAACTGCTGCGAGGACCTGGCCTGTATGATCACAACAACCAAGCACTTAAAAAGTTTGGATCTTGGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR GCA 72 bp | TCATTGCCAGGAAGCCATAAGCATCATCTACAATGTTaGAGTGATTCAGTATCAGCCGCTGGAGAGCACATT | + |
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Preference number: 3 (lower is better) Translates to: SLPGSHKHHLQC*SDSVSAAGEHI Trigger: AATGTGCTCTCCAGCGGCTGATACTGAATCACTGCAACATTGTAGATGATGCTTATGGCTTCCTGGCAATGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR TCA 72 bp | ATGGGAGTGTTCCCTAGATTGAGGTACTTTAAGTTTTaGTTGCTAAAAAGGAGCTTCCAGAGATGTTTCAGG | + |
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Preference number: 3 (lower is better) Translates to: MGVFPRLRYFKF*LLKRSFQRCFR Trigger: CCTGAAACATCTCTGGAAGCTCCTTTTTAGCAATCAAAACTTAAAGTACCTCAATCTAGGGAACACTCCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| 3UTR CAA 72 bp | ACCAGAAGGTGGCAGCTGGCAGGTGTGAGGCCACAGTaGTCCAGTCTCAGAGTCTCCACGGAGCACTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: TRRWQLAGVRPQ*SSLRVSTEHFG Trigger: TCCAAAGTGCTCCGTGGAGACTCTGAGACTGGACAACTGTGGCCTCACACCTGCCAGCTGCCACCTTCTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
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| CDS-3UTR TCA 90 bp | CCAATCACCATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGCTGATCTTCATGGCCCGTTaGCTCAGGATGCTGTCGCCC | + |
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Preference number: 4 (lower is better) Translates to: PITINHHVGLDKLNFLQLIFMAR*LRMLSP Trigger: GGGCGACAGCATCCTGAGTCAACGGGCCATGAAGAT...CAGCTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGATGGTGATTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| CDS-3UTR CCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCGCTGAGACCAGAAGGTaGCAGCTGGCAGGTGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVAETRR*QLAGVR Trigger: CCTCACACCTGCCAGCTGCCACCTTCTGGTCTCAGC...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
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| 3UTR CAA 72 bp | CCACAGGCCAATTATCCCCAGGTTAGAGACAGGGCATaGGAACGCAGAGCACAGCTTCAACATCCCCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PQANYPQVRDRA*ERRAQLQHPRC Trigger: ACATCGGGGATGTTGAAGCTGTGCTCTGCGTTCCAATGCCCTGTCTCTAACCTGGGGATAATTGGCCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| 3UTR CAA 72 bp | TGCCCCCAACCCAAGTCTCCTCAGGGAGCTGCTACTTaGCTTCAGTCCCTCACACAGGGTTATGACTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CPQPKSPQGAAT*LQSLTQGYDSF Trigger: AAAGGAGTCATAACCCTGTGTGAGGGACTGAAGCAAAGTAGCAGCTCCCTGAGGAGACTTGGGTTGGGGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | GCAGTGATTCAGTATCAGCCGCTGGAGAGCACATTCTGGATTCCTCAGGAACTGTTCCCCACCACTCCATaGGGAGGGGCTTACATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AVIQYQPLESTFWIPQELFPTTP*GGAYIV Trigger: CACAATGTAAGCCCCTCCTCATGGAGTGGTGGGGAA...CAGTTCCTGAGGAATCCAGAATGTGCTCTCCAGCGGCTGATACTGAATCACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | GTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCACCAGTTTCTGTATTCTGCAGGACTaGTTCCGCAGCTCGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VLGREGEGAHVFSFSTSFCILQD*FRSSRH Trigger: GTGCCTCGAGCTGCGGAATCAGTCCTGCAGAATACA...GAAACTGGTGGAAAAACTGAAGACATGAGCCCCCTCTCCTTCACGTCCTAGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | GCCTCACAGCAATTGGAAGTCAACTTACATGCCCCCAACCCAAGTCTCCTCAGGCCACACTCCTTCAGCTaGCATCATGCACAAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASQQLEVNLHAPNPSLLRPHSFS*HHAQTH Trigger: GTGGGTTTGTGCATGATGGCAGCTGAAGGAGTGTGG...CCTGAGGAGACTTGGGTTGGGGGCATGTAAGTTGACTTCCAATTGCTGTGAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTGATTCAGTATCAGCCGCTGGAGAGCACATTCTGGATTCCTCAGGAACTGATCCAGGGTGTCCATTaGGCTGGTGCCATTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: AVIQYQPLESTFWIPQELIQGVH*AGAIDL Trigger: CAGGTCAATGGCACCAGCCCAATGGACACCCTGGAT...CAGTTCCTGAGGAATCCAGAATGTGCTCTCCAGCGGCTGATACTGAATCACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | GACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCACCAGTTTCGGTCATCACCCATTGTGCTTTCTaGTGTCTGCTCCTGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DVKERGLMSSVFPPVSVITHCAF*CLLLLW Trigger: CCAGAGCAGGAGCAGACATCAGAAAGCACAATGGGT...GATGACCGAAACTGGTGGAAAAACTGAAGACATGAGCCCCCTCTCCTTCACGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCACAGCAATTGGAAGTCAACTTACATGCCCCCAACCCAAGTCTCCTCAGGATGATGAGAAAGGACTaGGGTAGGAGAGCCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASQQLEVNLHAPNPSLLRMMRKD*GRRAFL Trigger: GAGGAAGGCTCTCCTACCTCAGTCCTTTCTCATCAT...CCTGAGGAGACTTGGGTTGGGGGCATGTAAGTTGACTTCCAATTGCTGTGAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCCCCACCACTCCATaGGGAGGGGCTTACATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVFPTTP*GGAYIV Trigger: CACAATGTAAGCCCCTCCTCATGGAGTGGTGGGGAA...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTGTATTCTGCAGGACTaGTTCCGCAGCTCGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVCILQD*FRSSRH Trigger: GTGCCTCGAGCTGCGGAATCAGTCCTGCAGAATACA...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TACCAATCACCATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGCCCCCAGGCTGTTGTTTaGCAGGCACAGGTGTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: YQSPSITTWGLTNSTSSSPQAVV*QAQVCQ Trigger: TTGACACACCTGTGCCTGTCAAACAACAGCCTGGGG...GCTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGATGGTGATTGGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133237.2 |
||
| CDS-3UTR GCA 90 bp | ACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCACCAAGGTTTCTGATGTCTaGTCCTGCTCTGGTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TAVLGREGEGAHVFSFSTKVSDV*SCSGPW Trigger: CCAAGGACCAGAGCAGGAGCAGACATCAGAAACCTT...GGTGGAAAAACTGAAGACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | GATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCTCAAGTTCCGGAGGCTaGCAAGCACAGAGCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: DTAVLGREGEGAHVFSFSSSSGG*QAQSRS Trigger: ACTTCTGCTCTGTGCTTGGCAGCCTCCGGAACTTGA...GGAAAAACTGAAGACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTGTTTGACAGGCACAGGTGTGTCAAGTTCTGGTTGCTGAAAAGGGCTGAGAAACCGGTGAGAGTCTaGCAGGGTAGGGTGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLFDRHRCVKFWLLKRAEKPVRV*QGRVHL Trigger: GAGATGCACCCTACCCTGCCAGACTCTCACCGGTTT...CTCAGCCCTTTTCAGCAACCAGAACTTGACACACCTGTGCCTGTCAAACAACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | GACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCACCAGTTTCGGTCATCCACTGCTCACTGTTGTaGCCAACCTGGAGAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: DVKERGLMSSVFPPVSVIHCSLL*PTWRRM Trigger: CATCCTTCTCCAGGTTGGCCACAACAGTGAGCAGTG...GATGACCGAAACTGGTGGAAAAACTGAAGACATGAGCCCCCTCTCCTTCACGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | GATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCCACTGCTCACTGTTGTaGCCAACCTGGAGAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: DTAVLGREGEGAHVFSFSHCSLL*PTWRRM Trigger: CATCCTTCTCCAGGTTGGCCACAACAGTGAGCAGTG...GGAAAAACTGAAGACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCATCCAGGGTGTCCATTaGGCTGGTGCCATTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVIQGVH*AGAIDL Trigger: CAGGTCAATGGCACCAGCCCAATGGACACCCTGGAT...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCACCCATTGTGCTTTCTaGTGTCTGCTCCTGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVTHCAF*CLLLLW Trigger: CCAGAGCAGGAGCAGACATCAGAAAGCACAATGGGT...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | GAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCACCAGTTTCGGTCATCTTCATTTGGGCTGGTGCCATTaGCCTGCTGAGCTATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EGEGAHVFSFSTSFGHLHLGWCH*PAELSE Trigger: CTCTGATAGCTCAGCAGGTCAATGGCACCAGCCCAA...ATGAAGATGACCGAAACTGGTGGAAAAACTGAAGACATGAGCCCCCTCTCCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | GACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCACCAGTTTCGGTCATCTATTTTTGGCCAGGCTaGGACACTTTAGCCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DVKERGLMSSVFPPVSVIYFWPG*DTLAWW Trigger: CCACCAGGCTAAAGTGTCTCAGCCTGGCCAAAAATA...GATGACCGAAACTGGTGGAAAAACTGAAGACATGAGCCCCCTCTCCTTCACGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000133237.2 |
||
| CDS-3UTR TCA 90 bp | ATACCAATCACCATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGGTTGCTGAAAAGGGCTaGGACCAGAAGGTGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPITINHHVGLDKLNFLQVAEKG*DQKVAA Trigger: AGCTGCCACCTTCTGGTCTCAGCCCTTTTCAGCAAC...CTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGATGGTGATTGGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133237.2 |
||
| CDS-3UTR TCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTCACCACGTGGGGCTTaGCAAACTCAACTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVSPRGA*QTQLPP Trigger: TGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGA...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 |
||
| CDS-3UTR GCA 90 bp | CCAATCACCATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGCTGAAGGTTTCTGATGTCTaGTCCTGCTCTGGTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PITINHHVGLDKLNFLQLKVSDV*SCSGPW Trigger: CCAAGGACCAGAGCAGGAGCAGACATCAGAAACCTT...CAGCTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGATGGTGATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | TTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTCTGGCAGGGTAGGGTaGATCTCTTTCCCAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FTDTAVLGREGEGAHVFSSGRVG*ISFPVS Trigger: AGAAACTGGGAAAGAGATGCACCCTACCCTGCCAGA...ACTGAAGACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCAGGGAGCTGCTACTTTaGTTCAGTCCCTCACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVRELLL*FSPSHR Trigger: CCTGTGTGAGGGACTGAAGCAAAGTAGCAGCTCCCT...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 |
||
| CDS-3UTR CCA 90 bp | GACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCACCAGTTTCGGTCATCTGTCTGCTCCTGCTCTaGTCCTTGGTCTTTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: DVKERGLMSSVFPPVSVICLLLL*SLVFLD Trigger: ATCCAGAAAGACCAAGGACCAGAGCAGGAGCAGACA...GATGACCGAAACTGGTGGAAAAACTGAAGACATGAGCCCCCTCTCCTTCACGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | AGCACATTCTGGATTCCTCAGGAACTGACACAGCTGTTGCACTCCTTCAGTCCCTGTCTGCTCCTGCTCTaGTCCTTGGTCTTTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: STFWIPQELTQLLHSFSPCLLLL*SLVFLD Trigger: ATCCAGAAAGACCAAGGACCAGAGCAGGAGCAGACA...GGGACTGAAGGAGTGCAACAGCTGTGTCAGTTCCTGAGGAATCCAGAATGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TACCAATCACCATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGCGTAATCTGTTCTTCCTaGCTGAGAGCGCTCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YQSPSITTWGLTNSTSSSVICSS*LRALWE Trigger: TTCCCAGAGCGCTCTCAGTCAGGAAGAACAGATTAC...GCTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGATGGTGATTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | ACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCACCAGAAGGATGTTCATGTaGAAGAGGGCCAAGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TAVLGREGEGAHVFSFSTRRMFM*KRAKIS Trigger: TGAGATCTTGGCCCTCTTTCACATGAACATCCTTCT...GGTGGAAAAACTGAAGACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | AGCTTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGCTGTTCTTCCCCACCACTCCATaGGGAGGGGCTTACATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFNIPDVLKSFFTRFRLFFPTTP*GGAYIV Trigger: CACAATGTAAGCCCCTCCTCATGGAGTGGTGGGGAA...GAACAGCCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTATTTTTGGCCAGGCTaGGACACTTTAGCCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVYFWPG*DTLAWW Trigger: CCACCAGGCTAAAGTGTCTCAGCCTGGCCAAAAATA...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR GCA 90 bp | TACCAATCACCATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGCTCTGATGTCTGCTCCTaGTCTGGTCCTTGGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YQSPSITTWGLTNSTSSSSDVCS*SGPWSF Trigger: GAAAGACCAAGGACCAGAGCAGGAGCAGACATCAGA...GCTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGATGGTGATTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | ATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGCTGTCTTCTCACTCTGGCAGGGTAGGGTaGATCTCTTTCCCAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: INHHVGLDKLNFLQLSSHSGRVG*ISFPVS Trigger: AGAAACTGGGAAAGAGATGCACCCTACCCTGCCAGA...GTGAGAAGACAGCTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | ATTCCTCAGGAACTGACACAGCTGTTGCACTCCTTCAGTCCCCAGGCTGTTGTTTCAGCTTCTGTATTCTaGAGGACTGATTCCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPQELTQLLHSFSPQAVVSASVF*RTDSAA Trigger: AGCTGCGGAATCAGTCCTGCAGAATACAGAAGCTGA...AACAACAGCCTGGGGACTGAAGGAGTGCAACAGCTGTGTCAGTTCCTGAGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTGTCTGCTCCTGCTCTaGTCCTTGGTCTTTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVCLLLL*SLVFLD Trigger: ATCCAGAAAGACCAAGGACCAGAGCAGGAGCAGACA...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGCTGTTCAGGAAACCGGTGAGAGTCTaGCAGGGTAGGGTGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: FNIPDVLKSFFTRFRLFRKPVRV*QGRVHL Trigger: GAGATGCACCCTACCCTGCCAGACTCTCACCGGTTT...CCTGAACAGCCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | GAGCACAGCTTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGAGAACACCGACCTCATaGTCCACACTCCTTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EHSFNIPDVLKSFFTRFRRTPTS*STLLQL Trigger: CAGCTGAAGGAGTGTGGACCATGAGGTCGGTGTTCT...CCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAAGCTGTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGCTGTTCAGGATCCAGGGTGTCCATTaGGCTGGTGCCATTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: FNIPDVLKSFFTRFRLFRIQGVH*AGAIDL Trigger: CAGGTCAATGGCACCAGCCCAATGGACACCCTGGAT...CCTGAACAGCCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | GTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCACCAGTTTCCAGTTCTGTGTGAGTTaGCAGTCCACTAGTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLGREGEGAHVFSFSTSFQFCVS*QSTSSS Trigger: ACTGGAACTAGTGGACTGCCAACTCACACAGAACTG...GAAACTGGTGGAAAAACTGAAGACATGAGCCCCCTCTCCTTCACGTCCTAGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000133237.2 |
||
| CDS-3UTR TCA 90 bp | GATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCTTTCTGGTTGGGACATaGTCTTTGTCACTAGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: DTAVLGREGEGAHVFSFSFLVGT*SLSLDP Trigger: GGGATCTAGTGACAAAGATCATGTCCCAACCAGAAA...GGAAAAACTGAAGACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | TTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTCAGCTGTGCCAAACTaGTCTTCTCTGTCCACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FTDTAVLGREGEGAHVFSSAVPN*SSLSTL Trigger: TAAAGTGGACAGAGAAGAGCAGTTTGGCACAGCTGA...ACTGAAGACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | TTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGCTGTTCAGGCCACACTCCTTCAGCTaGCATCATGCACAAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FNIPDVLKSFFTRFRLFRPHSFS*HHAQTH Trigger: GTGGGTTTGTGCATGATGGCAGCTGAAGGAGTGTGG...CCTGAACAGCCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | ACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCAGCTTCTGTATTCTaGAGGACTGATTCCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TDTAVLGREGEGAHVFSFSASVF*RTDSAA Trigger: AGCTGCGGAATCAGTCCTGCAGAATACAGAAGCTGA...AAAACTGAAGACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTGTTCAGGTGAGGGTTaGAAGAGATGGCCAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVCSGEG*KRWPMT Trigger: TGTCATTGGCCATCTCTTGCAACCCTCACCTGAACA...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 |
||
| CDS-3UTR CCA 90 bp | TTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGCTGTTCAGGAGAACACCGACCTCATaGTCCACACTCCTTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FNIPDVLKSFFTRFRLFRRTPTS*STLLQL Trigger: CAGCTGAAGGAGTGTGGACCATGAGGTCGGTGTTCT...CCTGAACAGCCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCAGAGAGACCCAGTGTTaGAGCTTCTGCTCAACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVRETQC*SFCSTV Trigger: AACTGTTGAGCAGAAGCTCCAACACTGGGTCTCTCT...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TACCAATCACCATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGCAGGTGTGTCAAGTTCTaGTTGCTGAAAAGGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YQSPSITTWGLTNSTSSSRCVKF*LLKRAE Trigger: CTCAGCCCTTTTCAGCAACCAGAACTTGACACACCT...GCTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGATGGTGATTGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133237.2 |
||
| CDS-3UTR CCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCCTGGAGAGCACATTCTaGATTCCTCAGGAACTGACA | + |
|
Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVLESTF*IPQELT Trigger: TGTCAGTTCCTGAGGAATCCAGAATGTGCTCTCCAG...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| 3UTR CAA 72 bp | CTAGCATACCAATCACCATCAATCACCACGTGGGGCTaGACAAACTCAACTTCCTCCAGCTGTCTTCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LAYQSPSITTWG*TNSTSSSCLLT Trigger: AGTGAGAAGACAGCTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGATGGTGATTGGTATGCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| 3UTR CAA 72 bp | TTGCAAGAGATGGCCAATGACAATGCCTCACAGCAATaGGAAGTCAACTTACATGCCCCCAACCCAAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LQEMANDNASQQ*EVNLHAPNPSL Trigger: GAGACTTGGGTTGGGGGCATGTAAGTTGACTTCCAATTGCTGTGAGGCATTGTCATTGGCCATCTCTTGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCACAGCAATTGGAAGTCAACTTACATGCCCCCAACCCAAGTCTCCTCAGGTCTACTGACATTTTCTaGAGGAGACATTGTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASQQLEVNLHAPNPSLLRSTDIF*RRHCAF Trigger: GAAAGCACAATGTCTCCTTCAGAAAATGTCAGTAGA...CCTGAGGAGACTTGGGTTGGGGGCATGTAAGTTGACTTCCAATTGCTGTGAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCCTGTTCCACTTCTTCTaGTCCACTGTCTTTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVLFHFF*STVFQD Trigger: ATCCTGAAAGACAGTGGATCAGAAGAAGTGGAACAG...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | ATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGCTGTCTTCTCACCTGTTCCACTTCTTCTaGTCCACTGTCTTTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: INHHVGLDKLNFLQLSSHLFHFF*STVFQD Trigger: ATCCTGAAAGACAGTGGATCAGAAGAAGTGGAACAG...GTGAGAAGACAGCTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | CCAATCACCATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGCTGCATCCAAGCCATCTATaGCAAACAAGAGTCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PITINHHVGLDKLNFLQLHPSHL*QTRVFL Trigger: CAGAAAGACTCTTGTTTGTCATAGATGGCTTGGATG...CAGCTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGATGGTGATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | GATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCCATCCAAGCCATCTATaGCAAACAAGAGTCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DTAVLGREGEGAHVFSFSHPSHL*QTRVFL Trigger: CAGAAAGACTCTTGTTTGTCATAGATGGCTTGGATG...GGAAAAACTGAAGACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGCTGTTCAGGATGATGAGAAAGGACTaGGGTAGGAGAGCCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FNIPDVLKSFFTRFRLFRMMRKD*GRRAFL Trigger: GAGGAAGGCTCTCCTACCTCAGTCCTTTCTCATCAT...CCTGAACAGCCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | CAAGTAGGTTCCTTTAAAGCTTCACACAGTAGCTTCATTGCACCATCCCCTACGGTAATCTGTTCTTCCTaGCTGAGAGCGCTCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QVGSFKASHSSFIAPSPTVICSS*LRALWE Trigger: TTCCCAGAGCGCTCTCAGTCAGGAAGAACAGATTAC...CGTAGGGGATGGTGCAATGAAGCTACTGTGTGAAGCTTTAAAGGAACCTACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCAGAAGGATGTTCATGTaGAAGAGGGCCAAGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVRRMFM*KRAKIS Trigger: TGAGATCTTGGCCCTCTTTCACATGAACATCCTTCT...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCATGAAGCAAAAATGCTaGTTCCATTCCTCCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVMKQKC*FHSSSP Trigger: AGGGCTGGAGGAATGGAATCAGCATTTTTGCTTCAT...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | ACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTATGAAGCAAAAATGCTaGTTCCATTCCTCCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TDTAVLGREGEGAHVFSFMKQKC*FHSSSP Trigger: AGGGCTGGAGGAATGGAATCAGCATTTTTGCTTCAT...AAAACTGAAGACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | GATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCTTCTCTTCACCTCCATaGTGCTCCTTTGGTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: DTAVLGREGEGAHVFSFSFSSPP*CSFGFQ Trigger: TTGAAAACCAAAGGAGCATCATGGAGGTGAAGAGAA...GGAAAAACTGAAGACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | GAGCACAGCTTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGTCAAGTTCTGGTTGCTaGAAAGGGCTGAGACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EHSFNIPDVLKSFFTRFRSSSGC*KGLRPE Trigger: TTCTGGTCTCAGCCCTTTTCAGCAACCAGAACTTGA...CCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAAGCTGTGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133237.2 |
||
| CDS-3UTR GCA 90 bp | CAAGTAGGTTCCTTTAAAGCTTCACACAGTAGCTTCATTGCACCATCCCCTACGTCTGATGTCTGCTCCTaGTCTGGTCCTTGGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QVGSFKASHSSFIAPSPTSDVCS*SGPWSF Trigger: GAAAGACCAAGGACCAGAGCAGGAGCAGACATCAGA...CGTAGGGGATGGTGCAATGAAGCTACTGTGTGAAGCTTTAAAGGAACCTACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | ATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGCTGTCTTCTCACCTTAGCAATCAGCTGTaGCAAACTGCTCTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: INHHVGLDKLNFLQLSSHLSNQL*QTALLC Trigger: ACAGAGAAGAGCAGTTTGGCACAGCTGATTGCTAAG...GTGAGAAGACAGCTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | TACCAATCACCATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGCCTTAGCAATCAGCTGTaGCAAACTGCTCTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YQSPSITTWGLTNSTSSSLSNQL*QTALLC Trigger: ACAGAGAAGAGCAGTTTGGCACAGCTGATTGCTAAG...GCTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGATGGTGATTGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCGTTTGCAAGTCTCATTaGCAGGAAGCCATAAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVVCKSH*QEAISI Trigger: GATGCTTATGGCTTCCTGGCAATGAGACTTGCAAAC...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
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| CDS-3UTR CCA 90 bp | ACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCACCGTCATATCATCATGTTaGAGGACAGAGTCCATATCA | + |
|
Preference number: 4 (lower is better) Translates to: TAVLGREGEGAHVFSFSTVISSC*RTESIS Trigger: TGATATGGACTCTGTCCTCCAACATGATGATATGAC...GGTGGAAAAACTGAAGACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | ATTCCTCAGGAACTGACACAGCTGTTGCACTCCTTCAGTCCCCAGGCTGTTGTTTTCAAGTCCATCTTCTaGTTAATCAGCAGCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: IPQELTQLLHSFSPQAVVFKSIF*LISSHT Trigger: AGTGTGGCTGCTGATTAACCAGAAGATGGACTTGAA...AACAACAGCCTGGGGACTGAAGGAGTGCAACAGCTGTGTCAGTTCCTGAGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACGCTGAGACCAGAAGGTaGCAGCTGGCAGGTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHAETRR*QLAGVR Trigger: CCTCACACCTGCCAGCTGCCACCTTCTGGTCTCAGC...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR TCA 90 bp | GACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCACCAGTTTCGGTCATCTTGGTCTTTCTGGATTaGTTTACTGTCGTTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DVKERGLMSSVFPPVSVILVFLD*FTVVFW Trigger: CCAGAAAACGACAGTAAATCAATCCAGAAAGACCAA...GATGACCGAAACTGGTGGAAAAACTGAAGACATGAGCCCCCTCTCCTTCACGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | CTGTTGTTTGACAGGCACAGGTGTGTCAAGTTCTGGTTGCTGAAAAGGGCTGAGTCAGGATTGCTCTACTaGCATTTTCTGAAGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LLFDRHRCVKFWLLKRAESGLLY*HFLKET Trigger: TGTCTCCTTCAGAAAATGTCAGTAGAGCAATCCTGA...CTCAGCCCTTTTCAGCAACCAGAACTTGACACACCTGTGCCTGTCAAACAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | GAGCACAGCTTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGCTGTTCCACTTCTTCTaGTCCACTGTCTTTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EHSFNIPDVLKSFFTRFRLFHFF*STVFQD Trigger: ATCCTGAAAGACAGTGGATCAGAAGAAGTGGAACAG...CCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAAGCTGTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTGGTCAAACAGCTGGTaGTTTTCTATCAGAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVWSNSW*FSIREW Trigger: CCATTCTCTGATAGAAAATCACCAGCTGTTTGACCA...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | GCAGAGCACAGCTTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTATGAAGCAAAAATGCTaGTTCCATTCCTCCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AEHSFNIPDVLKSFFTRFMKQKC*FHSSSP Trigger: AGGGCTGGAGGAATGGAATCAGCATTTTTGCTTCAT...AAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAAGCTGTGCTCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | GTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCACCAGTTTCGGTCCTTGGTCTTTCTaGATTGATTTACTGTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VLGREGEGAHVFSFSTSFGPWSF*IDLLSF Trigger: AAACGACAGTAAATCAATCCAGAAAGACCAAGGACC...GAAACTGGTGGAAAAACTGAAGACATGAGCCCCCTCTCCTTCACGTCCTAGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | CCAATCACCATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGCTGTTTACTGTCTTTTTCTaGAGGACCCATTGTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PITINHHVGLDKLNFLQLFTVFF*RTHCAF Trigger: GAAAGCACAATGGGTCCTCCAGAAAAAGACAGTAAA...CAGCTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGATGGTGATTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTACTGTCTTTTTCTaGAGGACCCATTGTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FTDTAVLGREGEGAHVFSFTVFF*RTHCAF Trigger: GAAAGCACAATGGGTCCTCCAGAAAAAGACAGTAAA...ACTGAAGACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | AGCTTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGCTGTTCAGAGAGACCCAGTGTTaGAGCTTCTGCTCAACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SFNIPDVLKSFFTRFRLFRETQC*SFCSTV Trigger: AACTGTTGAGCAGAAGCTCCAACACTGGGTCTCTCT...GAACAGCCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAAGTCCATCTTCTaGTTAATCAGCAGCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVFKSIF*LISSHT Trigger: AGTGTGGCTGCTGATTAACCAGAAGATGGACTTGAA...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | GAGCACAGCTTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGTTACATTGTGTCTCCTaGACAGTAACAACAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EHSFNIPDVLKSFFTRFRLHCVS*TVTTGH Trigger: GTGCCCTGTTGTTACTGTCCAGGAGACACAATGTAA...CCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAAGCTGTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACAGCTGAGACCAGAAGGTaGCAGCTGGCAGGTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTAETRR*QLAGVR Trigger: CCTCACACCTGCCAGCTGCCACCTTCTGGTCTCAGC...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR CCA 90 bp | AGCTTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGCTGTTCTTCAGTATCAGCCGCTaGAGAGCACATTCTGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: SFNIPDVLKSFFTRFRLFFSISR*RAHSGF Trigger: GAATCCAGAATGTGCTCTCCAGCGGCTGATACTGAA...GAACAGCCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133237.2 |
||
| 3UTR CAA 72 bp | AGGGCGTTGTTACCAAGATCCAAACTTTTTAAGTGCTaGGTTGTTGTGATCATACAGGCCAGGTCCTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RALLPRSKLFKC*VVVIIQARSSQ Trigger: CTGCGAGGACCTGGCCTGTATGATCACAACAACCAAGCACTTAAAAAGTTTGGATCTTGGTAACAACGCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTGGTCTTTCTGGATTaGTTTACTGTCGTTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVLVFLD*FTVVFW Trigger: CCAGAAAACGACAGTAAATCAATCCAGAAAGACCAA...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | GAGCACAGCTTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGAGACATTGTGCTTTCTaGCTTCTGTTCCTCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: EHSFNIPDVLKSFFTRFRRHCAF*LLFLFQ Trigger: TTGGAAGAGGAACAGAAGTCAGAAAGCACAATGTCT...CCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAAGCTGTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | AGCTTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGCTGTTCTTTCTGGTTGGGACATaGTCTTTGTCACTAGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: SFNIPDVLKSFFTRFRLFFLVGT*SLSLDP Trigger: GGGATCTAGTGACAAAGATCATGTCCCAACCAGAAA...GAACAGCCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCACACAACCATTGACTTaGGTTTTTCTAAGCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVTQPLT*VFLSLC Trigger: ACACAGGCTTAGAAAAACTCAAGTCAATGGTTGTGT...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | ACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTACACAACCATTGACTTaGGTTTTTCTAAGCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TDTAVLGREGEGAHVFSFTQPLT*VFLSLC Trigger: ACACAGGCTTAGAAAAACTCAAGTCAATGGTTGTGT...AAAACTGAAGACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | GAGCACAGCTTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGTGGTCAAACAGCTGGTaGTTTTCTATCAGAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: EHSFNIPDVLKSFFTRFRWSNSW*FSIREW Trigger: CCATTCTCTGATAGAAAATCACCAGCTGTTTGACCA...CCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAAGCTGTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | ATACCAATCACCATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGTTCTCTTCACCTCCATaGTGCTCCTTTGGTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: IPITINHHVGLDKLNFLQFSSPP*CSFGFQ Trigger: TTGAAAACCAAAGGAGCATCATGGAGGTGAAGAGAA...CTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGATGGTGATTGGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACAATCTTCATGGCCCGTTaGCTCAGGATGCTGTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTIFMAR*LRMLSP Trigger: GGGCGACAGCATCCTGAGTCAACGGGCCATGAAGAT...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACCCCCAGGCTGTTGTTTaGCAGGCACAGGTGTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHPQAVV*QAQVCQ Trigger: TTGACACACCTGTGCCTGTCAAACAACAGCCTGGGG...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCACCGAAGGTTTTCTGGTATaGTTTAAAAGCATCAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: TAVLGREGEGAHVFSFSTEGFLV*FKSIRQ Trigger: TTGTCTGATGCTTTTAAACCATACCAGAAAACCTTC...GGTGGAAAAACTGAAGACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCGGCTGGAAGGTTTTCTaGTATGGTTTAAAAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVGWKVF*YGLKAS Trigger: TGATGCTTTTAAACCATACCAGAAAACCTTCCAGCC...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCAAGAGTCTTTCTGGTTaGGACATGATCTTTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVKSLSG*DMIFVT Trigger: AGTGACAAAGATCATGTCCCAACCAGAAAGACTCTT...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACAAACCGGTGAGAGTCTaGCAGGGTAGGGTGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHKPVRV*QGRVHL Trigger: GAGATGCACCCTACCCTGCCAGACTCTCACCGGTTT...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCACCTCCATGATGCTCCTTTaGTTTTCAATGAAGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TAVLGREGEGAHVFSFSTSMMLL*FSMKQK Trigger: TTTTTGCTTCATTGAAAACCAAAGGAGCATCATGGA...GGTGGAAAAACTGAAGACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAGCTGAGACCAGAAGGTaGCAGCTGGCAGGTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQAETRR*QLAGVR Trigger: CCTCACACCTGCCAGCTGCCACCTTCTGGTCTCAGC...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR TCA 90 bp | GAGCACAGCTTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGTTGGTCTTTCTGGATTaGTTTACTGTCGTTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EHSFNIPDVLKSFFTRFRLVFLD*FTVVFW Trigger: CCAGAAAACGACAGTAAATCAATCCAGAAAGACCAA...CCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAAGCTGTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACACCCATTGTGCTTTCTaGTGTCTGCTCCTGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHTHCAF*CLLLLW Trigger: CCAGAGCAGGAGCAGACATCAGAAAGCACAATGGGT...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | GAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCACCAGTTTCGGTCATCTTCATTCTACTGACATTTTCTaGAGGAGACATTGTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EGEGAHVFSFSTSFGHLHSTDIF*RRHCAF Trigger: GAAAGCACAATGTCTCCTTCAGAAAATGTCAGTAGA...ATGAAGATGACCGAAACTGGTGGAAAAACTGAAGACATGAGCCCCCTCTCCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | AGCTTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGCTGTTCTCAGGATTGCTCTACTaGCATTTTCTGAAGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SFNIPDVLKSFFTRFRLFSGLLY*HFLKET Trigger: TGTCTCCTTCAGAAAATGTCAGTAGAGCAATCCTGA...GAACAGCCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | GAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCACCAGTTTCGGTCATCTTCATACACAACCATTGACTTaGGTTTTTCTAAGCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EGEGAHVFSFSTSFGHLHTQPLT*VFLSLC Trigger: ACACAGGCTTAGAAAAACTCAAGTCAATGGTTGTGT...ATGAAGATGACCGAAACTGGTGGAAAAACTGAAGACATGAGCCCCCTCTCCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTCCCCACCACTCCATaGGGAGGGGCTTACATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTFPTTP*GGAYIV Trigger: CACAATGTAAGCCCCTCCTCATGGAGTGGTGGGGAA...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTATCTTCATGGCCCGTTaGCTCAGGATGCTGTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFIFMAR*LRMLSP Trigger: GGGCGACAGCATCCTGAGTCAACGGGCCATGAAGAT...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAATCTTCATGGCCCGTTaGCTCAGGATGCTGTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQIFMAR*LRMLSP Trigger: GGGCGACAGCATCCTGAGTCAACGGGCCATGAAGAT...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCACCAGGTTTAGGCTGTTCAGGTGAGGGTTGCAAGAGATGGCCAATGACATCATCTCATAACCAATaGTGGTTAACTCACAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSPGLGCSGEGCKRWPMTSSHNQ*WLTHRN Trigger: ATTCCTGTGAGTTAACCATCATTGGTTATGAGATGA...TGTCATTGGCCATCTCTTGCAACCCTCACCTGAACAGCCTAAACCTGGTGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133237.2 |
||
| CDS-3UTR TCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACAGTTGCTGAAAAGGGCTaGGACCAGAAGGTGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTVAEKG*DQKVAA Trigger: AGCTGCCACCTTCTGGTCTCAGCCCTTTTCAGCAAC...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR TCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACACCCCAGGCTGTTGTTTaGCAGGCACAGGTGTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTPQAVV*QAQVCQ Trigger: TTGACACACCTGTGCCTGTCAAACAACAGCCTGGGG...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACGTCACCTCCATTATCTaGTGTCTGCTCCTGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHVTSII*CLLLLW Trigger: CCAGAGCAGGAGCAGACATCAGATAATGGAGGTGAC...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086341.12 |
||
| CDS-3UTR GCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCACGTGCTTTCAAGATTaGTTTACTGTCTTTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVTCFQD*FTVFFW Trigger: CCAGAAAAAGACAGTAAAGCAATCTTGAAAGCACGT...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | ATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGCTGTCTTCTCACACGTGCTTTCAAGATTaGTTTACTGTCTTTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: INHHVGLDKLNFLQLSSHTCFQD*FTVFFW Trigger: CCAGAAAAAGACAGTAAAGCAATCTTGAAAGCACGT...GTGAGAAGACAGCTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACTCAAGTTCCGGAGGCTaGCAAGCACAGAGCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHSSSGG*QAQSRS Trigger: ACTTCTGCTCTGTGCTTGGCAGCCTCCGGAACTTGA...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTCCAGTATCAACTTTTaGAGTAGACACATTGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVSSINF*SRHIEL Trigger: TAGCTCAATGTGTCTACTGCAAAAGTTGATACTGGA...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR GCA 90 bp | ATACCAATCACCATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGCATCATCTACAATGTTaGAGTGATTCAGTATCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IPITINHHVGLDKLNFLQHHLQC*SDSVSA Trigger: GGCTGATACTGAATCACTGCAACATTGTAGATGATG...CTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGATGGTGATTGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133237.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCACCAGTTTCGGTCATCTTCATGGTCCTTGGTCTTTCTaGATTGATTTACTGTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: EGEGAHVFSFSTSFGHLHGPWSF*IDLLSF Trigger: AAACGACAGTAAATCAATCCAGAAAGACCAAGGACC...ATGAAGATGACCGAAACTGGTGGAAAAACTGAAGACATGAGCCCCCTCTCCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGCTTCCAGAGATGTTTCAGGCCAGACACTACCTCTGCACTCTTAAACCCCGAAGGTTTTCTGGTATaGTTTAAAAGCATCAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: RSFQRCFRPDTTSALLNPEGFLV*FKSIRQ Trigger: TTGTCTGATGCTTTTAAACCATACCAGAAAACCTTC...GGGGTTTAAGAGTGCAGAGGTAGTGTCTGGCCTGAAACATCTCTGGAAGCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAGCACAGCTTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTGGCTGGAAGGTTTTCTaGTATGGTTTAAAAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: AEHSFNIPDVLKSFFTRFGWKVF*YGLKAS Trigger: TGATGCTTTTAAACCATACCAGAAAACCTTCCAGCC...AAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAAGCTGTGCTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACCACTGCTCACTGTTGTaGCCAACCTGGAGAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHHCSLL*PTWRRM Trigger: CATCCTTCTCCAGGTTGGCCACAACAGTGAGCAGTG...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACAATCCAGGGTGTCCATTaGGCTGGTGCCATTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTIQGVH*AGAIDL Trigger: CAGGTCAATGGCACCAGCCCAATGGACACCCTGGAT...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGCTGTTCAGGTTCAAGTCCATCTTCTaGTTAATCAGCAGCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: FNIPDVLKSFFTRFRLFRFKSIF*LISSHT Trigger: AGTGTGGCTGCTGATTAACCAGAAGATGGACTTGAA...CCTGAACAGCCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| 3UTR CAA 72 bp | TCACACAGGGTTATGACTCCTTTGTCACCCAGGGCGTaGTTACCAAGATCCAAACTTTTTAAGTGCTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SHRVMTPLSPRA*LPRSKLFKCLV Trigger: AACCAAGCACTTAAAAAGTTTGGATCTTGGTAACAACGCCCTGGGTGACAAAGGAGTCATAACCCTGTGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACAACCCATTGTGCTTTCTaGTGTCTGCTCCTGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTTHCAF*CLLLLW Trigger: CCAGAGCAGGAGCAGACATCAGAAAGCACAATGGGT...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACATGATGAGAAAGGACTaGGGTAGGAGAGCCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHMMRKD*GRRAFL Trigger: GAGGAAGGCTCTCCTACCTCAGTCCTTTCTCATCAT...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAATTGGGCTGGTGCCATTaGCCTGCTGAGCTATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQLGWCH*PAELSE Trigger: CTCTGATAGCTCAGCAGGTCAATGGCACCAGCCCAA...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTTTGGGCTGGTGCCATTaGCCTGCTGAGCTATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFLGWCH*PAELSE Trigger: CTCTGATAGCTCAGCAGGTCAATGGCACCAGCCCAA...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTTTCCCCACCACTCCATaGGGAGGGGCTTACATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFFPTTP*GGAYIV Trigger: CACAATGTAAGCCCCTCCTCATGGAGTGGTGGGGAA...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTTGTATTCTGCAGGACTaGTTCCGCAGCTCGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFCILQD*FRSSRH Trigger: GTGCCTCGAGCTGCGGAATCAGTCCTGCAGAATACA...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | GAGCACAGCTTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGGAGTGTTCCCTAGATTaGGGTACTTTAAGTTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EHSFNIPDVLKSFFTRFRECSLD*GTLSFD Trigger: ATCAAAACTTAAAGTACCTCAATCTAGGGAACACTC...CCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAAGCTGTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133237.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACTATTTTTGGCCAGGCTaGGACACTTTAGCCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHYFWPG*DTLAWW Trigger: CCACCAGGCTAAAGTGTCTCAGCCTGGCCAAAAATA...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAGTTGCTGAAAAGGGCTaGGACCAGAAGGTGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQVAEKG*DQKVAA Trigger: AGCTGCCACCTTCTGGTCTCAGCCCTTTTCAGCAAC...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR TCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCCCCAGGCTGTTGTTTaGCAGGCACAGGTGTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFPQAVV*QAQVCQ Trigger: TTGACACACCTGTGCCTGTCAAACAACAGCCTGGGG...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACTCTGATGTCTGCTCCTaGTCTGGTCCTTGGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHSDVCS*SGPWSF Trigger: GAAAGACCAAGGACCAGAGCAGGAGCAGACATCAGA...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | ATACCAATCACCATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGACGTGCTTTCAAGATTaGTTTACTGTCTTTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IPITINHHVGLDKLNFLQTCFQD*FTVFFW Trigger: CCAGAAAAAGACAGTAAAGCAATCTTGAAAGCACGT...CTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGATGGTGATTGGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACTCTGGCAGGGTAGGGTaGATCTCTTTCCCAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHSGRVG*ISFPVS Trigger: AGAAACTGGGAAAGAGATGCACCCTACCCTGCCAGA...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATCAAGTTCCGGAGGCTaGCAAGCACAGAGCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTSSSGG*QAQSRS Trigger: ACTTCTGCTCTGTGCTTGGCAGCCTCCGGAACTTGA...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACTGTCTGCTCCTGCTCTaGTCCTTGGTCTTTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHCLLLL*SLVFLD Trigger: ATCCAGAAAGACCAAGGACCAGAGCAGGAGCAGACA...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCGAAGGTTTTCTGGTATaGTTTAAAAGCATCAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVEGFLV*FKSIRQ Trigger: TTGTCTGATGCTTTTAAACCATACCAGAAAACCTTC...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | AGCTTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGCTGTTCAAGAGTCTTTCTGGTTaGGACATGATCTTTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SFNIPDVLKSFFTRFRLFKSLSG*DMIFVT Trigger: AGTGACAAAGATCATGTCCCAACCAGAAAGACTCTT...GAACAGCCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTAAACCGGTGAGAGTCTaGCAGGGTAGGGTGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFKPVRV*QGRVHL Trigger: GAGATGCACCCTACCCTGCCAGACTCTCACCGGTTT...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACAAGAACACCGACCTCATaGTCCACACTCCTTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTRTPTS*STLLQL Trigger: CAGCTGAAGGAGTGTGGACCATGAGGTCGGTGTTCT...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTCCATGATGCTCCTTTaGTTTTCAATGAAGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KHFTDTAVLGREGEGAHVSMMLL*FSMKQK Trigger: TTTTTGCTTCATTGAAAACCAAAGGAGCATCATGGA...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACAATGATGAGAAAGGACTaGGGTAGGAGAGCCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTMMRKD*GRRAFL Trigger: GAGGAAGGCTCTCCTACCTCAGTCCTTTCTCATCAT...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACAGTAATCTGTTCTTCCTaGCTGAGAGCGCTCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTVICSS*LRALWE Trigger: TTCCCAGAGCGCTCTCAGTCAGGAAGAACAGATTAC...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATATTTTTGGCCAGGCTaGGACACTTTAGCCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTYFWPG*DTLAWW Trigger: CCACCAGGCTAAAGTGTCTCAGCCTGGCCAAAAATA...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACTCAAGTTCTGGTTGCTaGAAAGGGCTGAGACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHSSSGC*KGLRPE Trigger: TTCTGGTCTCAGCCCTTTTCAGCAACCAGAACTTGA...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACGCAAGAGATGGCCAATaGCAATGCCTCACAGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHARDGQ*QCLTAI Trigger: AATTGCTGTGAGGCATTGTCATTGGCCATCTCTTGC...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 |
||
| CDS-3UTR TCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAATTTAGGCTGTTCAGGTaGGGGTTGCAAGAGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQFRLFR*GLQEMA Trigger: GGCCATCTCTTGCAACCCTCACCTGAACAGCCTAAA...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 |
||
| CDS-3UTR TCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTTTTAGGCTGTTCAGGTaGGGGTTGCAAGAGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFFRLFR*GLQEMA Trigger: GGCCATCTCTTGCAACCCTCACCTGAACAGCCTAAA...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 |
||
| CDS-3UTR TCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTTCACCACGTGGGGCTTaGCAAACTCAACTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFSPRGA*QTQLPP Trigger: TGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGA...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAATCACCACGTGGGGCTTaGCAAACTCAACTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQSPRGA*QTQLPP Trigger: TGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGA...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 |
||
| CDS-3UTR GCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACAAAGGTTTCTGATGTCTaGTCCTGCTCTGGTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTKVSDV*SCSGPW Trigger: CCAAGGACCAGAGCAGGAGCAGACATCAGAAACCTT...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAACCACACTCCTTCAGCTaGCATCATGCACAAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQPHSFS*HHAQTH Trigger: GTGGGTTTGTGCATGATGGCAGCTGAAGGAGTGTGG...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCCACACTCCTTCAGCTaGCATCATGCACAAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFPHSFS*HHAQTH Trigger: GTGGGTTTGTGCATGATGGCAGCTGAAGGAGTGTGG...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAATCAAGTTCCGGAGGCTaGCAAGCACAGAGCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQSSSGG*QAQSRS Trigger: ACTTCTGCTCTGTGCTTGGCAGCCTCCGGAACTTGA...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACTCAGCTTCTGTATTCTaGAGGACTGATTCCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHSASVF*RTDSAA Trigger: AGCTGCGGAATCAGTCCTGCAGAATACAGAAGCTGA...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | AGCTTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGCTGTTCTCCAGTATCAACTTTTaGAGTAGACACATTGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SFNIPDVLKSFFTRFRLFSSINF*SRHIEL Trigger: TAGCTCAATGTGTCTACTGCAAAAGTTGATACTGGA...GAACAGCCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133237.2 |
||
| CDS-3UTR GCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACACCATTATCTGATGTCTaGTCCTGCTCTGGTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTPLSDV*SCSGPW Trigger: CCAAGGACCAGAGCAGGAGCAGACATCAGATAATGG...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086341.12 |
||
| CDS-3UTR CCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTAGAACACCGACCTCATaGTCCACACTCCTTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFRTPTS*STLLQL Trigger: CAGCTGAAGGAGTGTGGACCATGAGGTCGGTGTTCT...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACTGCTCACTGTTGTaGCCAACCTGGAGAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFHCSLL*PTWRRM Trigger: CATCCTTCTCCAGGTTGGCCACAACAGTGAGCAGTG...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAACACTGCTCACTGTTGTaGCCAACCTGGAGAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQHCSLL*PTWRRM Trigger: CATCCTTCTCCAGGTTGGCCACAACAGTGAGCAGTG...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACAGGTGTGTCAAGTTCTaGTTGCTGAAAAGGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHRCVKF*LLKRAE Trigger: CTCAGCCCTTTTCAGCAACCAGAACTTGACACACCT...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACTTCAGTATCAGCCGCTaGAGAGCACATTCTGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHFSISR*RAHSGF Trigger: GAATCCAGAATGTGCTCTCCAGCGGCTGATACTGAA...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACTTTCTGGTTGGGACATaGTCTTTGTCACTAGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHFLVGT*SLSLDP Trigger: GGGATCTAGTGACAAAGATCATGTCCCAACCAGAAA...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAATGATGAGAAAGGACTaGGGTAGGAGAGCCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQMMRKD*GRRAFL Trigger: GAGGAAGGCTCTCCTACCTCAGTCCTTTCTCATCAT...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTGTAATCTGTTCTTCCTaGCTGAGAGCGCTCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFVICSS*LRALWE Trigger: TTCCCAGAGCGCTCTCAGTCAGGAAGAACAGATTAC...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAGTAATCTGTTCTTCCTaGCTGAGAGCGCTCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQVICSS*LRALWE Trigger: TTCCCAGAGCGCTCTCAGTCAGGAAGAACAGATTAC...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACAGAAGGATGTTCATGTaGAAGAGGGCCAAGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHRRMFM*KRAKIS Trigger: TGAGATCTTGGCCCTCTTTCACATGAACATCCTTCT...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACATGAAGCAAAAATGCTaGTTCCATTCCTCCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHMKQKC*FHSSSP Trigger: AGGGCTGGAGGAATGGAATCAGCATTTTTGCTTCAT...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACAGCAAGAGATGGCCAATaGCAATGCCTCACAGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTARDGQ*QCLTAI Trigger: AATTGCTGTGAGGCATTGTCATTGGCCATCTCTTGC...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 |
||
| CDS-3UTR GCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAATCTGATGTCTGCTCCTaGTCTGGTCCTTGGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQSDVCS*SGPWSF Trigger: GAAAGACCAAGGACCAGAGCAGGAGCAGACATCAGA...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAACTGGAGGACCCATTGTaGTTTCTGATGTCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQLEDPL*FLMSAP Trigger: AGGAGCAGACATCAGAAAGCACAATGGGTCCTCCAG...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACTCAGCTGTGCCAAACTaGTCTTCTCTGTCCACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHSAVPN*SSLSTL Trigger: TAAAGTGGACAGAGAAGAGCAGTTTGGCACAGCTGA...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACCTTAGCAATCAGCTGTaGCAAACTGCTCTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHLSNQL*QTALLC Trigger: ACAGAGAAGAGCAGTTTGGCACAGCTGATTGCTAAG...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAATCTGGCAGGGTAGGGTaGATCTCTTTCCCAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQSGRVG*ISFPVS Trigger: AGAAACTGGGAAAGAGATGCACCCTACCCTGCCAGA...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTTCTGGCAGGGTAGGGTaGATCTCTTTCCCAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFSGRVG*ISFPVS Trigger: AGAAACTGGGAAAGAGATGCACCCTACCCTGCCAGA...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATCAGCTTCTGTATTCTaGAGGACTGATTCCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTSASVF*RTDSAA Trigger: AGCTGCGGAATCAGTCCTGCAGAATACAGAAGCTGA...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACGTTTGCAAGTCTCATTaGCAGGAAGCCATAAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHVCKSH*QEAISI Trigger: GATGCTTATGGCTTCCTGGCAATGAGACTTGCAAAC...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR GCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATGTTCAGGTGAGGGTTaGAAGAGATGGCCAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTCSGEG*KRWPMT Trigger: TGTCATTGGCCATCTCTTGCAACCCTCACCTGAACA...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 |
||
| CDS-3UTR CCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAATGTCTGCTCCTGCTCTaGTCCTTGGTCTTTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQCLLLL*SLVFLD Trigger: ATCCAGAAAGACCAAGGACCAGAGCAGGAGCAGACA...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACAAGAGAGACCCAGTGTTaGAGCTTCTGCTCAACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTRETQC*SFCSTV Trigger: AACTGTTGAGCAGAAGCTCCAACACTGGGTCTCTCT...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACAAGGTGTGTCAAGTTCTaGTTGCTGAAAAGGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTRCVKF*LLKRAE Trigger: CTCAGCCCTTTTCAGCAACCAGAACTTGACACACCT...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR CCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACACTGGAGAGCACATTCTaGATTCCTCAGGAACTGACA | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTLESTF*IPQELT Trigger: TGTCAGTTCCTGAGGAATCCAGAATGTGCTCTCCAG...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR CCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTCAGTATCAGCCGCTaGAGAGCACATTCTGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTFSISR*RAHSGF Trigger: GAATCCAGAATGTGCTCTCCAGCGGCTGATACTGAA...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACAGACATTGTGCTTTCTaGCTTCTGTTCCTCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHRHCAF*LLFLFQ Trigger: TTGGAAGAGGAACAGAAGTCAGAAAGCACAATGTCT...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACTCAGGATTGCTCTACTaGCATTTTCTGAAGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHSGLLY*HFLKET Trigger: TGTCTCCTTCAGAAAATGTCAGTAGAGCAATCCTGA...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCTGGTTGGGACATaGTCTTTGTCACTAGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTFLVGT*SLSLDP Trigger: GGGATCTAGTGACAAAGATCATGTCCCAACCAGAAA...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACTGGTCAAACAGCTGGTaGTTTTCTATCAGAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHWSNSW*FSIREW Trigger: CCATTCTCTGATAGAAAATCACCAGCTGTTTGACCA...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACAAGAAGGATGTTCATGTaGAAGAGGGCCAAGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTRRMFM*KRAKIS Trigger: TGAGATCTTGGCCCTCTTTCACATGAACATCCTTCT...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAATCAAGTTCTGGTTGCTaGAAAGGGCTGAGACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQSSSGC*KGLRPE Trigger: TTCTGGTCTCAGCCCTTTTCAGCAACCAGAACTTGA...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR GCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACACTTAGCAATCAGCTGTaGCAAACTGCTCTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTLSNQL*QTALLC Trigger: ACAGAGAAGAGCAGTTTGGCACAGCTGATTGCTAAG...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTAGAGAGACCCAGTGTTaGAGCTTCTGCTCAACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFRETQC*SFCSTV Trigger: AACTGTTGAGCAGAAGCTCCAACACTGGGTCTCTCT...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTACATTGTGTCTCCTaGACAGTAACAACAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTLHCVS*TVTTGH Trigger: GTGCCCTGTTGTTACTGTCCAGGAGACACAATGTAA...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTAGGTGTGTCAAGTTCTaGTTGCTGAAAAGGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFRCVKF*LLKRAE Trigger: CTCAGCCCTTTTCAGCAACCAGAACTTGACACACCT...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR CCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTTTCAGTATCAGCCGCTaGAGAGCACATTCTGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFFSISR*RAHSGF Trigger: GAATCCAGAATGTGCTCTCCAGCGGCTGATACTGAA...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR CCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCAGTTCTGTGTGAGTTaGCAGTCCACTAGTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFQFCVS*QSTSSS Trigger: ACTGGAACTAGTGGACTGCCAACTCACACAGAACTG...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR CCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACAATGCCTCACAGCAATTaGAAGTCAACTTACATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTMPHSN*KSTYMP Trigger: GGGCATGTAAGTTGACTTCCAATTGCTGTGAGGCAT...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACTTGGTCTTTCTGGATTaGTTTACTGTCGTTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHLVFLD*FTVVFW Trigger: CCAGAAAACGACAGTAAATCAATCCAGAAAGACCAA...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACAAGACATTGTGCTTTCTaGCTTCTGTTCCTCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTRHCAF*LLFLFQ Trigger: TTGGAAGAGGAACAGAAGTCAGAAAGCACAATGTCT...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAACTGTTCCACTTCTTCTaGTCCACTGTCTTTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQLFHFF*STVFQD Trigger: ATCCTGAAAGACAGTGGATCAGAAGAAGTGGAACAG...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACACATCCAAGCCATCTATaGCAAACAAGAGTCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTHPSHL*QTRVFL Trigger: CAGAAAGACTCTTGTTTGTCATAGATGGCTTGGATG...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATGGTCAAACAGCTGGTaGTTTTCTATCAGAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTWSNSW*FSIREW Trigger: CCATTCTCTGATAGAAAATCACCAGCTGTTTGACCA...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTAGAAGGATGTTCATGTaGAAGAGGGCCAAGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFRRMFM*KRAKIS Trigger: TGAGATCTTGGCCCTCTTTCACATGAACATCCTTCT...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAATGAAGCAAAAATGCTaGTTCCATTCCTCCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQMKQKC*FHSSSP Trigger: AGGGCTGGAGGAATGGAATCAGCATTTTTGCTTCAT...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTCTCTTCACCTCCATaGTGCTCCTTTGGTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTFSSPP*CSFGFQ Trigger: TTGAAAACCAAAGGAGCATCATGGAGGTGAAGAGAA...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTTCAGCTGTGCCAAACTaGTCTTCTCTGTCCACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFSAVPN*SSLSTL Trigger: TAAAGTGGACAGAGAAGAGCAGTTTGGCACAGCTGA...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACCATCATCTACAATGTTaGAGTGATTCAGTATCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHHHLQC*SDSVSA Trigger: GGCTGATACTGAATCACTGCAACATTGTAGATGATG...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR GCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAGTTTGCAAGTCTCATTaGCAGGAAGCCATAAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQVCKSH*QEAISI Trigger: GATGCTTATGGCTTCCTGGCAATGAGACTTGCAAAC...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACGGTCCTTGGTCTTTCTaGATTGATTTACTGTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHGPWSF*IDLLSF Trigger: AAACGACAGTAAATCAATCCAGAAAGACCAAGGACC...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACAAGAGTCTTTCTGGTTaGGACATGATCTTTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHKSLSG*DMIFVT Trigger: AGTGACAAAGATCATGTCCCAACCAGAAAGACTCTT...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTTTACATTGTGTCTCCTaGACAGTAACAACAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFLHCVS*TVTTGH Trigger: GTGCCCTGTTGTTACTGTCCAGGAGACACAATGTAA...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTATGCCTCACAGCAATTaGAAGTCAACTTACATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFMPHSN*KSTYMP Trigger: GGGCATGTAAGTTGACTTCCAATTGCTGTGAGGCAT...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 |
||
| CDS-3UTR TCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTAGACATTGTGCTTTCTaGCTTCTGTTCCTCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFRHCAF*LLFLFQ Trigger: TTGGAAGAGGAACAGAAGTCAGAAAGCACAATGTCT...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATCTACTGACATTTTCTaGAGGAGACATTGTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTSTDIF*RRHCAF Trigger: GAAAGCACAATGTCTCCTTCAGAAAATGTCAGTAGA...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAATCAGGATTGCTCTACTaGCATTTTCTGAAGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQSGLLY*HFLKET Trigger: TGTCTCCTTCAGAAAATGTCAGTAGAGCAATCCTGA...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTTCAGGATTGCTCTACTaGCATTTTCTGAAGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFSGLLY*HFLKET Trigger: TGTCTCCTTCAGAAAATGTCAGTAGAGCAATCCTGA...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAACATCCAAGCCATCTATaGCAAACAAGAGTCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQHPSHL*QTRVFL Trigger: CAGAAAGACTCTTGTTTGTCATAGATGGCTTGGATG...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAATGGTCAAACAGCTGGTaGTTTTCTATCAGAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQWSNSW*FSIREW Trigger: CCATTCTCTGATAGAAAATCACCAGCTGTTTGACCA...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTTTCTCTTCACCTCCATaGTGCTCCTTTGGTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFFSSPP*CSFGFQ Trigger: TTGAAAACCAAAGGAGCATCATGGAGGTGAAGAGAA...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAATTCTCTTCACCTCCATaGTGCTCCTTTGGTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQFSSPP*CSFGFQ Trigger: TTGAAAACCAAAGGAGCATCATGGAGGTGAAGAGAA...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACGAGTGTTCCCTAGATTaGGGTACTTTAAGTTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHECSLD*GTLSFD Trigger: ATCAAAACTTAAAGTACCTCAATCTAGGGAACACTC...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACTCATCTCATAACCAATaGTGGTTAACTCACAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHSSHNQ*WLTHRN Trigger: ATTCCTGTGAGTTAACCATCATTGGTTATGAGATGA...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACACGTGCTTTCAAGATTaGTTTACTGTCTTTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHTCFQD*FTVFFW Trigger: CCAGAAAAAGACAGTAAAGCAATCTTGAAAGCACGT...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTACTGTCTTTTTCTaGAGGACCCATTGTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTFTVFF*RTHCAF Trigger: GAAAGCACAATGGGTCCTCCAGAAAAAGACAGTAAA...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACAGGCTGGAAGGTTTTCTaGTATGGTTTAAAAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTGWKVF*YGLKAS Trigger: TGATGCTTTTAAACCATACCAGAAAACCTTCCAGCC...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACAAAGAGTCTTTCTGGTTaGGACATGATCTTTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTKSLSG*DMIFVT Trigger: AGTGACAAAGATCATGTCCCAACCAGAAAGACTCTT...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACAGTCATATCATCATGTTaGAGGACAGAGTCCATATCA | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTVISSC*RTESIS Trigger: TGATATGGACTCTGTCCTCCAACATGATGATATGAC...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAATTCAAGTCCATCTTCTaGTTAATCAGCAGCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQFKSIF*LISSHT Trigger: AGTGTGGCTGCTGATTAACCAGAAGATGGACTTGAA...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTTTGGTCTTTCTGGATTaGTTTACTGTCGTTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFLVFLD*FTVVFW Trigger: CCAGAAAACGACAGTAAATCAATCCAGAAAGACCAA...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTTCTACTGACATTTTCTaGAGGAGACATTGTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFSTDIF*RRHCAF Trigger: GAAAGCACAATGTCTCCTTCAGAAAATGTCAGTAGA...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAATCTACTGACATTTTCTaGAGGAGACATTGTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQSTDIF*RRHCAF Trigger: GAAAGCACAATGTCTCCTTCAGAAAATGTCAGTAGA...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTACACAACCATTGACTTaGGTTTTTCTAAGCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFTQPLT*VFLSLC Trigger: ACACAGGCTTAGAAAAACTCAAGTCAATGGTTGTGT...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATCATCTCATAACCAATaGTGGTTAACTCACAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SKCCVYFILATSSKVRQTSSHNQ*WLTHRN Trigger: ATTCCTGTGAGTTAACCATCATTGGTTATGAGATGA...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR GCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCATCATCTACAATGTTaGAGTGATTCAGTATCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFHHLQC*SDSVSA Trigger: GGCTGATACTGAATCACTGCAACATTGTAGATGATG...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAGGTCCTTGGTCTTTCTaGATTGATTTACTGTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQGPWSF*IDLLSF Trigger: AAACGACAGTAAATCAATCCAGAAAGACCAAGGACC...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTGGTCCTTGGTCTTTCTaGATTGATTTACTGTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFGPWSF*IDLLSF Trigger: AAACGACAGTAAATCAATCCAGAAAGACCAAGGACC...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTTTTACTGTCTTTTTCTaGAGGACCCATTGTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFFTVFF*RTHCAF Trigger: GAAAGCACAATGGGTCCTCCAGAAAAAGACAGTAAA...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAATTTACTGTCTTTTTCTaGAGGACCCATTGTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQFTVFF*RTHCAF Trigger: GAAAGCACAATGGGTCCTCCAGAAAAAGACAGTAAA...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAGGCTGGAAGGTTTTCTaGTATGGTTTAAAAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQGWKVF*YGLKAS Trigger: TGATGCTTTTAAACCATACCAGAAAACCTTCCAGCC...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAAAGAGTCTTTCTGGTTaGGACATGATCTTTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQKSLSG*DMIFVT Trigger: AGTGACAAAGATCATGTCCCAACCAGAAAGACTCTT...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAGTCATATCATCATGTTaGAGGACAGAGTCCATATCA | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQVISSC*RTESIS Trigger: TGATATGGACTCTGTCCTCCAACATGATGATATGAC...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTGTCATATCATCATGTTaGAGGACAGAGTCCATATCA | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFVISSC*RTESIS Trigger: TGATATGGACTCTGTCCTCCAACATGATGATATGAC...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACTCCATGATGCTCCTTTaGTTTTCAATGAAGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CCVYFILATSSKVRQTFHSMMLL*FSMKQK Trigger: TTTTTGCTTCATTGAAAACCAAAGGAGCATCATGGA...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR TCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTGAGTGTTCCCTAGATTaGGGTACTTTAAGTTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFECSLD*GTLSFD Trigger: ATCAAAACTTAAAGTACCTCAATCTAGGGAACACTC...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR TCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTTCATCTCATAACCAATaGTGGTTAACTCACAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFSSHNQ*WLTHRN Trigger: ATTCCTGTGAGTTAACCATCATTGGTTATGAGATGA...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR GCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAATCCAGTATCAACTTTTaGAGTAGACACATTGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQSSINF*SRHIEL Trigger: TAGCTCAATGTGTCTACTGCAAAAGTTGATACTGGA...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR CCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTGAAGGTTTTCTGGTATaGTTTAAAAGCATCAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFEGFLV*FKSIRQ Trigger: TTGTCTGATGCTTTTAAACCATACCAGAAAACCTTC...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAGAAGGTTTTCTGGTATaGTTTAAAAGCATCAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQEGFLV*FKSIRQ Trigger: TTGTCTGATGCTTTTAAACCATACCAGAAAACCTTC...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAATCCATGATGCTCCTTTaGTTTTCAATGAAGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSKCCVYFILATSSKVRQSMMLL*FSMKQK Trigger: TTTTTGCTTCATTGAAAACCAAAGGAGCATCATGGA...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CCA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTTCCATGATGCTCCTTTaGTTTTCAATGAAGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KCCVYFILATSSKVRQTFSMMLL*FSMKQK Trigger: TTTTTGCTTCATTGAAAACCAAAGGAGCATCATGGA...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS GCA 90 bp | TCCGCAGCTCGAGGCACAGTATCTTCATGGCCCGTTGACTCAGGATaGTGTCGCCCAAGTCCAGCTCCTTCAAGTTCCGGAGGCTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SAARGTVSSWPVDSG*CRPSPAPSSSGGCQ Trigger: TTGGCAGCCTCCGGAACTTGAAGGAGCTGGACTTGGGCGACAGCATCCTGAGTCAACGGGCCATGAAGATACTGTGCCTCGAGCTGCGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS CCA 90 bp | GTATTCTGCAGGACTGATTCCGCAGCTCGAGGCACAGTATCTTCATaGCCCGTTGACTCAGGATGCTGTCGCCCAAGTCCAGCTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VFCRTDSAARGTVSS*PVDSGCCRPSPAPS Trigger: TGAAGGAGCTGGACTTGGGCGACAGCATCCTGAGTCAACGGGCCATGAAGATACTGTGCCTCGAGCTGCGGAATCAGTCCTGCAGAATAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS TCA 90 bp | CAGGGCATTGGAACGCAGAGCACAGCTTCAACATCCCCGATGTACTaGAGTCATTCTTCACCAGGTTTAGGCCAAGTCTCCTCAGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QGIGTQSTASTSPMY*SHSSPGLGQVSSGS Trigger: GCTCCCTGAGGAGACTTGGCCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAAGCTGTGCTCTGCGTTCCAATGCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108441.8 |
||
| CDS TCA 90 bp | ATAGACAATAGAAGGCATCCAGGGTGTCCATTGGGCTGGTGCCATTaGCCTGCTGAGCTATCAGAGAGACCCAGTGTTGGAGCTTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: IDNRRHPGCPLGWCH*PAELSERPSVGASA Trigger: AGCAGAAGCTCCAACACTGGGTCTCTCTGATAGCTCAGCAGGTCAATGGCACCAGCCCAATGGACACCCTGGATGCCTTCTATTGTCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCACCCCAGCTGAGATCTCCTaGATGCAGACAGTCCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: TAVLGREGEGAHVFSFSTPAEIS*MQTVLQ Trigger: TTGAAGGACTGTCTGCATCAAGGAGATCTCAGCTGG...GGTGGAAAAACTGAAGACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | TACCAATCACCATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGCTCTCCACGGAGCACTTaGGATGTTTCAGCGCTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: YQSPSITTWGLTNSTSSSSPRST*DVSALR Trigger: GCGAAGCGCTGAAACATCCAAAGTGCTCCGTGGAGA...GCTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGATGGTGATTGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133237.2 |
||
| CDS CCA 90 bp | AAGTTTCCCCACCACTCCATGAGGAGGGGCTTACATTGTGTCTCCTaGACAGTAACAACAGGGCACAGCTCGAGAGTATTATCTACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: KFPHHSMRRGLHCVS*TVTTGHSSRVLSTE Trigger: CTCGGTAGATAATACTCTCGAGCTGTGCCCTGTTGTTACTGTCCAGGAGACACAATGTAAGCCCCTCCTCATGGAGTGGTGGGGAAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCCAGAGAGACCCAGTGTaGGAGCTTCTGCTCAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: KHFTDTAVLGREGEGAHVQRDPV*ELLLNS Trigger: ACTGTTGAGCAGAAGCTCCAACACTGGGTCTCTCTG...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | ATACCAATCACCATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGCAGAGAGACCCAGTGTaGGAGCTTCTGCTCAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: IPITINHHVGLDKLNFLQQRDPV*ELLLNS Trigger: ACTGTTGAGCAGAAGCTCCAACACTGGGTCTCTCTG...CTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGATGGTGATTGGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | TTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGCTGTTCAGGTCCCCAGGCTGTTGTTaGACAGGCACAGGTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FNIPDVLKSFFTRFRLFRSPGCC*TGTGVS Trigger: TGACACACCTGTGCCTGTCAAACAACAGCCTGGGGA...CCTGAACAGCCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133237.2 |
||
| CDS-3UTR CAA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTTCTGGAGGACCCATaGTGCTTTCTGATGTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KHFTDTAVLGREGEGAHVFLEDP*CFLMSA Trigger: AGCAGACATCAGAAAGCACAATGGGTCCTCCAGAAA...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | CCAATCACCATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGCTGCAAGAGTCTTTCTGGTaGGGACATGATCTTTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PITINHHVGLDKLNFLQLQESFW*GHDLCH Trigger: GTGACAAAGATCATGTCCCAACCAGAAAGACTCTTG...CAGCTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGATGGTGATTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | CCAATCACCATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGCTGATTCTATCAGACTCATaGGAGATGTTCTCGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: PITINHHVGLDKLNFLQLILSDS*EMFSRT Trigger: GGTCCTCGAGAACATCTCCAATGAGTCTGATAGAAT...CAGCTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGATGGTGATTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | AGCTTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGCTGTTCCAGAGAGACCCAGTGTaGGAGCTTCTGCTCAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: SFNIPDVLKSFFTRFRLFQRDPV*ELLLNS Trigger: ACTGTTGAGCAGAAGCTCCAACACTGGGTCTCTCTG...GAACAGCCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | TACCAATCACCATCAATCACCACGTGGGGCTTGACAAACTCAACTTCCTCCAGCACTCCCACTCTATTTTaGGCCAGGCTGAGACACTTT | + |
|
Preference number: 5 (lower is better) Translates to: YQSPSITTWGLTNSTSSSTPTLF*ARLRHF Trigger: AAAGTGTCTCAGCCTGGCCAAAAATAGAGTGGGAGT...GCTGGAGGAAGTTGAGTTTGTCAAGCCCCACGTGGTGATTGATGGTGATTGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133237.2 |
||
| CDS-3UTR CAA 90 bp | GACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCACCAGTTTCGGTCATCTGTTTGCAAGTCTCATaGCCAGGAAGCCATAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: DVKERGLMSSVFPPVSVICLQVS*PGSHKH Trigger: ATGCTTATGGCTTCCTGGCAATGAGACTTGCAAACA...GATGACCGAAACTGGTGGAAAAACTGAAGACATGAGCCCCCTCTCCTTCACGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000133237.2 |
||
| CDS-3UTR CAA 90 bp | TTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTCAGCTTTGTGTTGTTaGCAAGTCTCATTGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FTDTAVLGREGEGAHVFSSALCC*QVSLPG Trigger: TCCTGGCAATGAGACTTGCAAACAACACAAAGCTGA...ACTGAAGACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133237.2 |
||
| CDS-3UTR CAA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTGTCACCCAGGGCGTaGTTACCAAGATCCAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: KHFTDTAVLGREGEGAHVLSPRA*LPRSKL Trigger: AAGTTTGGATCTTGGTAACAACGCCCTGGGTGACAA...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 |
||
| CDS CCA 90 bp | GAGGTAGGAGAGCCTTCCTCAGGAGGCTGTACATCAGGATGTATATaGGCTGTTCATCCTTCCAGTCTCTGGATAGTGTCATATCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: EVGEPSSGGCTSGCI*AVHPSSLWIVSYHH Trigger: ATGATGATATGACACTATCCAGAGACTGGAAGGATGAACAGCCCATATACATCCTGATGTACAGCCTCCTGAGGAAGGCTCTCCTACCTC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS CCA 90 bp | TTAGGCTATAGTTCTTCAGGTCATCATCATAGAACACCGACCTCATaGTCCACACTCCTTCAGCTGCCATCATGCACAAACCCACTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LGYSSSGHHHRTPTS*STLLQLPSCTNPLE Trigger: CTCTAGTGGGTTTGTGCATGATGGCAGCTGAAGGAGTGTGGACCATGAGGTCGGTGTTCTATGATGATGACCTGAAGAACTATAGCCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTCAGCTTTGTGTTGTTaGCAAGTCTCATTGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KHFTDTAVLGREGEGAHVSALCC*QVSLPG Trigger: TCCTGGCAATGAGACTTGCAAACAACACAAAGCTGA...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS GCA 90 bp | GTGCTTTCAAGATTGCTTTACTGTCTTTTTCTGGAGGACCCATTGTaGTTTCTGATGTCTGCTCCTGCTCTGGTCCTTGGTCTTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VLSRLLYCLFLEDPL*FLMSAPALVLGLSG Trigger: TCCAGAAAGACCAAGGACCAGAGCAGGAGCAGACATCAGAAAGCACAATGGGTCCTCCAGAAAAAGACAGTAAAGCAATCTTGAAAGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS CCA 90 bp | GGAGGACCCATTGTGCTTTCTGATGTCTGCTCCTGCTCTGGTCCTTaGTCTTTCTGGATTGATTTACTGTCGTTTTCTGGAGAAGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: GGPIVLSDVCSCSGP*SFWIDLLSFSGEVI Trigger: AATGACTTCTCCAGAAAACGACAGTAAATCAATCCAGAAAGACCAAGGACCAGAGCAGGAGCAGACATCAGAAAGCACAATGGGTCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGAGAGCACATTCTGGATTCCTCAGGAACTGACACAGCTGTTGCACTCCTTTTTCTGAAGGAGACATaGTGCTTTCTGACTTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: AGEHILDSSGTDTAVALLFLKET*CFLTSV Trigger: AACAGAAGTCAGAAAGCACAATGTCTCCTTCAGAAA...AAGGAGTGCAACAGCTGTGTCAGTTCCTGAGGAATCCAGAATGTGCTCTCCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTGTCATATCATCATGTaGGAGGACAGAGTCCATATC | + |
|
Preference number: 5 (lower is better) Translates to: KHFTDTAVLGREGEGAHVCHIIM*EDRVHI Trigger: GATATGGACTCTGTCCTCCAACATGATGATATGACA...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCACCCAGAGAATGGAAGACTaGTATTCTATCAGACTCATT | + |
|
Preference number: 5 (lower is better) Translates to: TAVLGREGEGAHVFSFSTQRMED*YSIRLI Trigger: AATGAGTCTGATAGAATACAAGTCTTCCATTCTCTG...GGTGGAAAAACTGAAGACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | GACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCACCAGTTTCGGTCATCGTCTTCAAGATATCCTaGTTCATGAGGCCAAATAAG | + |
|
Preference number: 5 (lower is better) Translates to: DVKERGLMSSVFPPVSVIVFKIS*FMRPNK Trigger: CTTATTTGGCCTCATGAACAAGGATATCTTGAAGAC...GATGACCGAAACTGGTGGAAAAACTGAAGACATGAGCCCCCTCTCCTTCACGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS TCA 90 bp | AGTTTTTCTAAGCCTGTGTTTCTGGTGGTAATGATGAGAAAGGACTaGGGTAGGAGAGCCTTCCTCAGGAGGCTGTACATCAGGATGTAT | + |
|
Preference number: 5 (lower is better) Translates to: SFSKPVFLVVMMRKD*GRRAFLRRLYIRMY Trigger: ATACATCCTGATGTACAGCCTCCTGAGGAAGGCTCTCCTACCTCAGTCCTTTCTCATCATTACCACCAGAAACACAGGCTTAGAAAAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS TCA 90 bp | GATATTCAAACAGAACCTCCAGAGTCTTCAAGATATCCTTGTTCATaGGGCCAAATAAGAAACGCTTCATCCCGAGGAGGCGAGTGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: DIQTEPPESSRYPCS*GQIRNASSRGGECR Trigger: ACGACACTCGCCTCCTCGGGATGAAGCGTTTCTTATTTGGCCTCATGAACAAGGATATCTTGAAGACTCTGGAGGTTCTGTTTGAATATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS GCA 90 bp | CTGTCTTTTTCTGGAGGACCCATTGTGCTTTCTGATGTCTGCTCCTaGTCTGGTCCTTGGTCTTTCTGGATTGATTTACTGTCGTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSFSGGPIVLSDVCS*SGPWSFWIDLLSFS Trigger: AGAAAACGACAGTAAATCAATCCAGAAAGACCAAGGACCAGAGCAGGAGCAGACATCAGAAAGCACAATGGGTCCTCCAGAAAAAGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCCTTGGTCTTTCTGGATaGATTTACTGTCGTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KHFTDTAVLGREGEGAHVLGLSG*IYCRFL Trigger: CAGAAAACGACAGTAAATCAATCCAGAAAGACCAAG...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | AAACATTTCACAGATACTGCAGTGCTAGGACGTGAAGGAGAGGGGGCTCATGTCTTTCTGAAGGAGACATaGTGCTTTCTGACTTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: KHFTDTAVLGREGEGAHVFLKET*CFLTSV Trigger: AACAGAAGTCAGAAAGCACAATGTCTCCTTCAGAAA...GACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAATGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | GAGCACAGCTTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGTGTCATATCATCATGTaGGAGGACAGAGTCCATATC | + |
|
Preference number: 5 (lower is better) Translates to: EHSFNIPDVLKSFFTRFRCHIIM*EDRVHI Trigger: GATATGGACTCTGTCCTCCAACATGATGATATGACA...CCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAAGCTGTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | GAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCACCAGTTTCGGTCATCTTCATTGTCATATCATCATGTaGGAGGACAGAGTCCATATC | + |
|
Preference number: 5 (lower is better) Translates to: EGEGAHVFSFSTSFGHLHCHIIM*EDRVHI Trigger: GATATGGACTCTGTCCTCCAACATGATGATATGACA...ATGAAGATGACCGAAACTGGTGGAAAAACTGAAGACATGAGCCCCCTCTCCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | GACGTGAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCACCAGTTTCGGTCATCCAGAGAATGGAAGACTaGTATTCTATCAGACTCATT | + |
|
Preference number: 5 (lower is better) Translates to: DVKERGLMSSVFPPVSVIQRMED*YSIRLI Trigger: AATGAGTCTGATAGAATACAAGTCTTCCATTCTCTG...GATGACCGAAACTGGTGGAAAAACTGAAGACATGAGCCCCCTCTCCTTCACGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | GAAGGAGAGGGGGCTCATGTCTTCAGTTTTTCCACCAGTTTCGGTCATCTTCATTTTCTGAAGGAGACATaGTGCTTTCTGACTTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: EGEGAHVFSFSTSFGHLHFLKET*CFLTSV Trigger: AACAGAAGTCAGAAAGCACAATGTCTCCTTCAGAAA...ATGAAGATGACCGAAACTGGTGGAAAAACTGAAGACATGAGCCCCCTCTCCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | TTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTAGGCTGTTCAGGGACAAAGGACATTTTTaGGAAGAGTTTACCCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FNIPDVLKSFFTRFRLFRDKGHF*EEFTLC Trigger: GCACAGGGTAAACTCTTCCAAAAAATGTCCTTTGTC...CCTGAACAGCCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | CAAGTAGGTTCCTTTAAAGCTTCACACAGTAGCTTCATTGCACCATCCCCTACGGACAAAGGACATTTTTaGGAAGAGTTTACCCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QVGSFKASHSSFIAPSPTDKGHF*EEFTLC Trigger: GCACAGGGTAAACTCTTCCAAAAAATGTCCTTTGTC...CGTAGGGGATGGTGCAATGAAGCTACTGTGTGAAGCTTTAAAGGAACCTACTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | GCAGAGCACAGCTTCAACATCCCCGATGTACTGAAGTCATTCTTCACCAGGTTTGTCTTCAAGATATCCTaGTTCATGAGGCCAAATAAG | + |
|
Preference number: 5 (lower is better) Translates to: AEHSFNIPDVLKSFFTRFVFKIS*FMRPNK Trigger: CTTATTTGGCCTCATGAACAAGGATATCTTGAAGAC...AAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAAGCTGTGCTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATCTCCACGGAGCACTTaGGATGTTTCAGCGCTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SKCCVYFILATSSKVRQTSPRST*DVSALR Trigger: GCGAAGCGCTGAAACATCCAAAGTGCTCCGTGGAGA...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS CCA 90 bp | TGTAAGTCACCTCCATTATCTGATGTCTGCTCCTGCTCTGGTCCTTaGTCTTTCTGGATTGATTTACTGTCGTTTTCTGGAGAAGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: CKSPPLSDVCSCSGP*SFWIDLLSFSGEVI Trigger: AATGACTTCTCCAGAAAACGACAGTAAATCAATCCAGAAAGACCAAGGACCAGAGCAGGAGCAGACATCAGATAATGGAGGTGACTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086341.12 |
||
| CDS-3UTR CAA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACCCAGCTGAGATCTCCTaGATGCAGACAGTCCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: CCVYFILATSSKVRQTFHPAEIS*MQTVLQ Trigger: TTGAAGGACTGTCTGCATCAAGGAGATCTCAGCTGG...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACACAGAGAGACCCAGTGTaGGAGCTTCTGCTCAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: SKCCVYFILATSSKVRQTQRDPV*ELLLNS Trigger: ACTGTTGAGCAGAAGCTCCAACACTGGGTCTCTCTG...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAATCTCCACGGAGCACTTaGGATGTTTCAGCGCTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: FSKCCVYFILATSSKVRQSPRST*DVSALR Trigger: GCGAAGCGCTGAAACATCCAAAGTGCTCCGTGGAGA...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR CAA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTTCTCCACGGAGCACTTaGGATGTTTCAGCGCTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: KCCVYFILATSSKVRQTFSPRST*DVSALR Trigger: GCGAAGCGCTGAAACATCCAAAGTGCTCCGTGGAGA...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR CAA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTTCCCCAGGCTGTTGTTaGACAGGCACAGGTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KCCVYFILATSSKVRQTFSPGCC*TGTGVS Trigger: TGACACACCTGTGCCTGTCAAACAACAGCCTGGGGA...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAATCCCCAGGCTGTTGTTaGACAGGCACAGGTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FSKCCVYFILATSSKVRQSPGCC*TGTGVS Trigger: TGACACACCTGTGCCTGTCAAACAACAGCCTGGGGA...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS CCA 90 bp | GATTTTCTATCAGAGAATGGAAGACTTGTATTCTATCAGACTCATTaGAGATGTTCTCGAGGACCAGCTGAGATCTCCTTGATGCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: DFLSENGRLVFYQTH*RCSRGPAEISLMQT Trigger: TGTCTGCATCAAGGAGATCTCAGCTGGTCCTCGAGAACATCTCCAATGAGTCTGATAGAATACAAGTCTTCCATTCTCTGATAGAAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACTTTCTGGAGGACCCATaGTGCTTTCTGATGTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: CCVYFILATSSKVRQTFHFLEDP*CFLMSA Trigger: AGCAGACATCAGAAAGCACAATGGGTCCTCCAGAAA...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCAGAGAGACCCAGTGTaGGAGCTTCTGCTCAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: KCCVYFILATSSKVRQTFQRDPV*ELLLNS Trigger: ACTGTTGAGCAGAAGCTCCAACACTGGGTCTCTCTG...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACACTCCCACTCTATTTTaGGCCAGGCTGAGACACTTT | + |
|
Preference number: 5 (lower is better) Translates to: CCVYFILATSSKVRQTFHTPTLF*ARLRHF Trigger: AAAGTGTCTCAGCCTGGCCAAAAATAGAGTGGGAGT...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS GCA 90 bp | ACTTCATCTTCTTCCTTAGATTGTAAGGTTTCTGATGTCTGCTCCTaGTCTGGTCCTTGGTCTTTCTGGATTGATTTACTGTCGTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TSSSSLDCKVSDVCS*SGPWSFWIDLLSFS Trigger: AGAAAACGACAGTAAATCAATCCAGAAAGACCAAGGACCAGAGCAGGAGCAGACATCAGAAACCTTACAATCTAAGGAAGAAGATGAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACCAAGAGTCTTTCTGGTaGGGACATGATCTTTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: CCVYFILATSSKVRQTFHQESFW*GHDLCH Trigger: GTGACAAAGATCATGTCCCAACCAGAAAGACTCTTG...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCCAGCTGAGATCTCCTaGATGCAGACAGTCCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: KCCVYFILATSSKVRQTFPAEIS*MQTVLQ Trigger: TTGAAGGACTGTCTGCATCAAGGAGATCTCAGCTGG...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTGTCACCCAGGGCGTaGTTACCAAGATCCAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: SKCCVYFILATSSKVRQTLSPRA*LPRSKL Trigger: AAGTTTGGATCTTGGTAACAACGCCCTGGGTGACAA...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 |
||
| CDS-3UTR CAA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACTGTCATATCATCATGTaGGAGGACAGAGTCCATATC | + |
|
Preference number: 5 (lower is better) Translates to: CCVYFILATSSKVRQTFHCHIIM*EDRVHI Trigger: GATATGGACTCTGTCCTCCAACATGATGATATGACA...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACAATTCTATCAGACTCATaGGAGATGTTCTCGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: SKCCVYFILATSSKVRQTILSDS*EMFSRT Trigger: GGTCCTCGAGAACATCTCCAATGAGTCTGATAGAAT...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACTCCCACTCTATTTTaGGCCAGGCTGAGACACTTT | + |
|
Preference number: 5 (lower is better) Translates to: FSKCCVYFILATSSKVRQTPTLF*ARLRHF Trigger: AAAGTGTCTCAGCCTGGCCAAAAATAGAGTGGGAGT...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR CAA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTACTCCCACTCTATTTTaGGCCAGGCTGAGACACTTT | + |
|
Preference number: 5 (lower is better) Translates to: KCCVYFILATSSKVRQTFTPTLF*ARLRHF Trigger: AAAGTGTCTCAGCCTGGCCAAAAATAGAGTGGGAGT...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR CAA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATGTTTGCAAGTCTCATaGCCAGGAAGCCATAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SKCCVYFILATSSKVRQTCLQVS*PGSHKH Trigger: ATGCTTATGGCTTCCTGGCAATGAGACTTGCAAACA...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR CAA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATCAGCTTTGTGTTGTTaGCAAGTCTCATTGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SKCCVYFILATSSKVRQTSALCC*QVSLPG Trigger: TCCTGGCAATGAGACTTGCAAACAACACAAAGCTGA...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR CAA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTTTGTCACCCAGGGCGTaGTTACCAAGATCCAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: KCCVYFILATSSKVRQTFLSPRA*LPRSKL Trigger: AAGTTTGGATCTTGGTAACAACGCCCTGGGTGACAA...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 |
||
| CDS-3UTR CAA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACCTTGGTCTTTCTGGATaGATTTACTGTCGTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CCVYFILATSSKVRQTFHLGLSG*IYCRFL Trigger: CAGAAAACGACAGTAAATCAATCCAGAAAGACCAAG...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACAGACAAAGGACATTTTTaGGAAGAGTTTACCCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SKCCVYFILATSSKVRQTDKGHF*EEFTLC Trigger: GCACAGGGTAAACTCTTCCAAAAAATGTCCTTTGTC...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCAAGAGTCTTTCTGGTaGGGACATGATCTTTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: KCCVYFILATSSKVRQTFQESFW*GHDLCH Trigger: GTGACAAAGATCATGTCCCAACCAGAAAGACTCTTG...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAACAAGAGTCTTTCTGGTaGGGACATGATCTTTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: FSKCCVYFILATSSKVRQQESFW*GHDLCH Trigger: GTGACAAAGATCATGTCCCAACCAGAAAGACTCTTG...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATGTCATATCATCATGTaGGAGGACAGAGTCCATATC | + |
|
Preference number: 5 (lower is better) Translates to: SKCCVYFILATSSKVRQTCHIIM*EDRVHI Trigger: GATATGGACTCTGTCCTCCAACATGATGATATGACA...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTATTCTATCAGACTCATaGGAGATGTTCTCGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: KCCVYFILATSSKVRQTFILSDS*EMFSRT Trigger: GGTCCTCGAGAACATCTCCAATGAGTCTGATAGAAT...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAATTCTATCAGACTCATaGGAGATGTTCTCGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: FSKCCVYFILATSSKVRQILSDS*EMFSRT Trigger: GGTCCTCGAGAACATCTCCAATGAGTCTGATAGAAT...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | TGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCACGTCTTCAAGATATCCTaGTTCATGAGGCCAAATAAG | + |
|
Preference number: 5 (lower is better) Translates to: CCVYFILATSSKVRQTFHVFKIS*FMRPNK Trigger: CTTATTTGGCCTCATGAACAAGGATATCTTGAAGAC...GTGAAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAATGTTTGCAAGTCTCATaGCCAGGAAGCCATAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: FSKCCVYFILATSSKVRQCLQVS*PGSHKH Trigger: ATGCTTATGGCTTCCTGGCAATGAGACTTGCAAACA...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR CAA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTTGTTTGCAAGTCTCATaGCCAGGAAGCCATAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KCCVYFILATSSKVRQTFCLQVS*PGSHKH Trigger: ATGCTTATGGCTTCCTGGCAATGAGACTTGCAAACA...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAATCAGCTTTGTGTTGTTaGCAAGTCTCATTGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FSKCCVYFILATSSKVRQSALCC*QVSLPG Trigger: TCCTGGCAATGAGACTTGCAAACAACACAAAGCTGA...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS-3UTR CAA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTAATGCCTCACAGCAATaGGAAGTCAACTTACATGCC | + |
|
Preference number: 5 (lower is better) Translates to: KCCVYFILATSSKVRQTFNASQQ*EVNLHA Trigger: GGCATGTAAGTTGACTTCCAATTGCTGTGAGGCATT...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 |
||
| CDS-3UTR CAA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACACTTGGTCTTTCTGGATaGATTTACTGTCGTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SKCCVYFILATSSKVRQTLGLSG*IYCRFL Trigger: CAGAAAACGACAGTAAATCAATCCAGAAAGACCAAG...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAGACAAAGGACATTTTTaGGAAGAGTTTACCCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSKCCVYFILATSSKVRQDKGHF*EEFTLC Trigger: GCACAGGGTAAACTCTTCCAAAAAATGTCCTTTGTC...TTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTTTTCTGAAGGAGACATaGTGCTTTCTGACTTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: KCCVYFILATSSKVRQTFFLKET*CFLTSV Trigger: AACAGAAGTCAGAAAGCACAATGTCTCCTTCAGAAA...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | TCTAAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACACAGAGAATGGAAGACTaGTATTCTATCAGACTCATT | + |
|
Preference number: 5 (lower is better) Translates to: SKCCVYFILATSSKVRQTQRMED*YSIRLI Trigger: AATGAGTCTGATAGAATACAAGTCTTCCATTCTCTG...TGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTTAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTGTCTTCAAGATATCCTaGTTCATGAGGCCAAATAAG | + |
|
Preference number: 5 (lower is better) Translates to: KCCVYFILATSSKVRQTFVFKIS*FMRPNK Trigger: CTTATTTGGCCTCATGAACAAGGATATCTTGAAGAC...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS-3UTR CAA 90 bp | AAATGCTGTGTTTATTTCATTCTTGCTACATCCTCCAAGGTGAGACAAACATTTCAGAGAATGGAAGACTaGTATTCTATCAGACTCATT | + |
|
Preference number: 5 (lower is better) Translates to: KCCVYFILATSSKVRQTFQRMED*YSIRLI Trigger: AATGAGTCTGATAGAATACAAGTCTTCCATTCTCTG...AAATGTTTGTCTCACCTTGGAGGATGTAGCAAGAATGAAATAAACACAGCATTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS CAA 90 bp | GCAGGACTGATTCCGCAGCTCGAGGCACAGTATCTTCATGGCCCGTaGACTCAGGATGCTGTCGCCCAAGTCCAGCTCCTTCAAGTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: AGLIPQLEAQYLHGP*TQDAVAQVQLLQVP Trigger: CGGAACTTGAAGGAGCTGGACTTGGGCGACAGCATCCTGAGTCAACGGGCCATGAAGATACTGTGCCTCGAGCTGCGGAATCAGTCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS TCA 72 bp | TTCCGCAGCTCGAGGCACAGTATCTTCATGGCCCGTTaGCTCAGGATGCTGTCGCCCAAGTCCAGCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FRSSRHSIFMAR*LRMLSPKSSSF Trigger: GAAGGAGCTGGACTTGGGCGACAGCATCCTGAGTCAACGGGCCATGAAGATACTGTGCCTCGAGCTGCGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS GCA 72 bp | CGAGGCACAGTATCTTCATGGCCCGTTGACTCAGGATaGTGTCGCCCAAGTCCAGCTCCTTCAAGTTCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: RGTVSSWPVDSG*CRPSPAPSSSG Trigger: TCCGGAACTTGAAGGAGCTGGACTTGGGCGACAGCATCCTGAGTCAACGGGCCATGAAGATACTGTGCCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS CCA 72 bp | AGGACTGATTCCGCAGCTCGAGGCACAGTATCTTCATaGCCCGTTGACTCAGGATGCTGTCGCCCAAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RTDSAARGTVSS*PVDSGCCRPSP Trigger: TGGACTTGGGCGACAGCATCCTGAGTCAACGGGCCATGAAGATACTGTGCCTCGAGCTGCGGAATCAGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS CAA 72 bp | ATTCCGCAGCTCGAGGCACAGTATCTTCATGGCCCGTaGACTCAGGATGCTGTCGCCCAAGTCCAGCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: IPQLEAQYLHGP*TQDAVAQVQLL Trigger: AAGGAGCTGGACTTGGGCGACAGCATCCTGAGTCAACGGGCCATGAAGATACTGTGCCTCGAGCTGCGGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS CAA 72 bp | GAAGTTTCCCCACCACTCCATGAGGAGGGGCTTACATaGTGTCTCCTGGACAGTAACAACAGGGCACAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: EVSPPLHEEGLT*CLLDSNNRAQL Trigger: GAGCTGTGCCCTGTTGTTACTGTCCAGGAGACACAATGTAAGCCCCTCCTCATGGAGTGGTGGGGAAACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS TCA 72 bp | AAAGGGCTGAGACCAGAAGGTGGCAGCTGGCAGGTGTaGGGCCACAGTTGTCCAGTATCAACTTTTGCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: KGLRPEGGSWQV*GHSCPVSTFAV Trigger: TACTGCAAAAGTTGATACTGGACAACTGTGGCCTCACACCTGCCAGCTGCCACCTTCTGGTCTCAGCCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS CAA 90 bp | TGGGCTGGTGCCATTGACCTGCTGAGCTATCAGAGAGACCCAGTGTaGGAGCTTCTGCTCAACAGTTGGAATCACGGGATATTCAAACAG | + |
|
Preference number: 6 (lower is better) Translates to: WAGAIDLLSYQRDPV*ELLLNSWNHGIFKQ Trigger: CTGTTTGAATATCCCGTGATTCCAACTGTTGAGCAGAAGCTCCAACACTGGGTCTCTCTGATAGCTCAGCAGGTCAATGGCACCAGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS TCA 72 bp | GCACTCTTAAACGTCAGCTTCTGTATTCTGCAGGACTaGTTCCGCAGCTCGAGGCACAGTATCTTCATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ALLNVSFCILQD*FRSSRHSIFMA Trigger: GGCCATGAAGATACTGTGCCTCGAGCTGCGGAATCAGTCCTGCAGAATACAGAAGCTGACGTTTAAGAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS TCA 72 bp | GGAACGCAGAGCACAGCTTCAACATCCCCGATGTACTaGAGTCATTCTTCACCAGGTTTAGGCCAAGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GTQSTASTSPMY*SHSSPGLGQVS Trigger: GGAGACTTGGCCTAAACCTGGTGAAGAATGACTTCAGTACATCGGGGATGTTGAAGCTGTGCTCTGCGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108441.8 |
||
| CDS GCA 72 bp | AGGTTTAGGCCAAGTCTCCTCAGGGAGCTGCTACTTTaGTTCAGTCCCTCACACAGGGTTATGACTCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RFRPSLLRELLL*FSPSHRVMTPL Trigger: CAAAGGAGTCATAACCCTGTGTGAGGGACTGAAGCAAAGTAGCAGCTCCCTGAGGAGACTTGGCCTAAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108441.8 |
||
| CDS CCA 72 bp | CACCACTCCATGAGGAGGGGCTTACATTGTGTCTCCTaGACAGTAACAACAGGGCACAGCTCGAGAGTATTA | + |
|
Preference number: 6 (lower is better) Translates to: HHSMRRGLHCVS*TVTTGHSSRVL Trigger: TAATACTCTCGAGCTGTGCCCTGTTGTTACTGTCCAGGAGACACAATGTAAGCCCCTCCTCATGGAGTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS CAA 72 bp | GCCATTGACCTGCTGAGCTATCAGAGAGACCCAGTGTaGGAGCTTCTGCTCAACAGTTGGAATCACGGGATA | + |
|
Preference number: 6 (lower is better) Translates to: AIDLLSYQRDPV*ELLLNSWNHGI Trigger: TATCCCGTGATTCCAACTGTTGAGCAGAAGCTCCAACACTGGGTCTCTCTGATAGCTCAGCAGGTCAATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS CAA 72 bp | CACAGGAATCCAACCTCAGAGTCTCCACGGAGCACTTaGGATGTTTCAGCGCTTCGCAGGCTAACTTCATGT | + |
|
Preference number: 6 (lower is better) Translates to: HRNPTSESPRST*DVSALRRLTSC Trigger: ACATGAAGTTAGCCTGCGAAGCGCTGAAACATCCAAAGTGCTCCGTGGAGACTCTGAGGTTGGATTCCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS CCA 72 bp | GAGCCTTCCTCAGGAGGCTGTACATCAGGATGTATATaGGCTGTTCATCCTTCCAGTCTCTGGATAGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: EPSSGGCTSGCI*AVHPSSLWIVS Trigger: TGACACTATCCAGAGACTGGAAGGATGAACAGCCCATATACATCCTGATGTACAGCCTCCTGAGGAAGGCTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS CAA 72 bp | CAAGTCCATCTTCTGGTTAATCAGCAGCCACACTTCTaGGAAGCGTTTGAGAGCCCCGCCAACAAACTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QVHLLVNQQPHF*EAFESPANKLF Trigger: GAAGAGTTTGTTGGCGGGGCTCTCAAACGCTTCCAAGAAGTGTGGCTGCTGATTAACCAGAAGATGGACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS CAA 90 bp | AGAGACCTTCAAGTCCATCTTCTGGTTAATCAGCAGCCACACTTCTaGGAAGCGTTTGAGAGCCCCGCCAACAAACTCTTCATCCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RDLQVHLLVNQQPHF*EAFESPANKLFILR Trigger: TCTCAGGATGAAGAGTTTGTTGGCGGGGCTCTCAAACGCTTCCAAGAAGTGTGGCTGCTGATTAACCAGAAGATGGACTTGAAGGTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS TCA 72 bp | ACAGCTCGAGAGTATTATCTACCGAGAGGAGGTCTCTaGTATCCACCCGGATTGCCTTCAAGTTCTGACAGT | + |
|
Preference number: 6 (lower is better) Translates to: TAREYYLPRGGL*YPPGLPSSSDS Trigger: ACTGTCAGAACTTGAAGGCAATCCGGGTGGATATCAGAGACCTCCTCTCGGTAGATAATACTCTCGAGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS GCA 72 bp | GCAGGTGTGAGGCCACAGTTGTCCAGTATCAACTTTTaGAGTAGACACATTGAGCTACTCAAGGCATTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: AGVRPQLSSINF*SRHIELLKAFP Trigger: TGGGAATGCCTTGAGTAGCTCAATGTGTCTACTGCAAAAGTTGATACTGGACAACTGTGGCCTCACACCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
||
| CDS CCA 72 bp | AGTTCTTCAGGTCATCATCATAGAACACCGACCTCATaGTCCACACTCCTTCAGCTGCCATCATGCACAAAC | + |
|
Preference number: 6 (lower is better) Translates to: SSSGHHHRTPTS*STLLQLPSCTN Trigger: GTTTGTGCATGATGGCAGCTGAAGGAGTGTGGACCATGAGGTCGGTGTTCTATGATGATGACCTGAAGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS CCA 72 bp | AAGTCCATCTTCTGGTTAATCAGCAGCCACACTTCTTaGAAGCGTTTGAGAGCCCCGCCAACAAACTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: KSIFWLISSHTS*KRLRAPPTNSS Trigger: TGAAGAGTTTGTTGGCGGGGCTCTCAAACGCTTCCAAGAAGTGTGGCTGCTGATTAACCAGAAGATGGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS CAA 72 bp | CATTGGAGATGTTCTCGAGGACCAGCTGAGATCTCCTaGATGCAGACAGTCCTTCAACCAGTATATAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: HWRCSRGPAEIS*MQTVLQPVYRG Trigger: CCCTCTATATACTGGTTGAAGGACTGTCTGCATCAAGGAGATCTCAGCTGGTCCTCGAGAACATCTCCAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS CAA 72 bp | TCAGAGAGACCCAGTGTTGGAGCTTCTGCTCAACAGTaGGAATCACGGGATATTCAAACAGAACCTCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SERPSVGASAQQ*ESRDIQTEPPE Trigger: CTCTGGAGGTTCTGTTTGAATATCCCGTGATTCCAACTGTTGAGCAGAAGCTCCAACACTGGGTCTCTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS CAA 90 bp | GCTGAGCTATCAGAGAGACCCAGTGTTGGAGCTTCTGCTCAACAGTaGGAATCACGGGATATTCAAACAGAACCTCCAGAGTCTTCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: AELSERPSVGASAQQ*ESRDIQTEPPESSR Trigger: TCTTGAAGACTCTGGAGGTTCTGTTTGAATATCCCGTGATTCCAACTGTTGAGCAGAAGCTCCAACACTGGGTCTCTCTGATAGCTCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS CAA 90 bp | CACGTGCTTTCAAGATTGCTTTACTGTCTTTTTCTGGAGGACCCATaGTGCTTTCTGATGTCTGCTCCTGCTCTGGTCCTTGGTCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: HVLSRLLYCLFLEDP*CFLMSAPALVLGLS Trigger: AGAAAGACCAAGGACCAGAGCAGGAGCAGACATCAGAAAGCACAATGGGTCCTCCAGAAAAAGACAGTAAAGCAATCTTGAAAGCACGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS TCA 72 bp | TTTACTGTCTTTTTCTGGAGGACCCATTGTGCTTTCTaGTGTCTGCTCCTGCTCTGGTCCTTGGTCTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: FTVFFWRTHCAF*CLLLLWSLVFL Trigger: CAGAAAGACCAAGGACCAGAGCAGGAGCAGACATCAGAAAGCACAATGGGTCCTCCAGAAAAAGACAGTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS TCA 72 bp | ACAGAACCTCCAGAGTCTTCAAGATATCCTTGTTCATaGGGCCAAATAAGAAACGCTTCATCCCGAGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: TEPPESSRYPCS*GQIRNASSRGG Trigger: GCCTCCTCGGGATGAAGCGTTTCTTATTTGGCCTCATGAACAAGGATATCTTGAAGACTCTGGAGGTTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS GCA 72 bp | AGATTGCTTTACTGTCTTTTTCTGGAGGACCCATTGTaGTTTCTGATGTCTGCTCCTGCTCTGGTCCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RLLYCLFLEDPL*FLMSAPALVLG Trigger: ACCAAGGACCAGAGCAGGAGCAGACATCAGAAAGCACAATGGGTCCTCCAGAAAAAGACAGTAAAGCAATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS GCA 72 bp | ATCCCAGGAGTCTGGACACTCCTTAGCAATCAGCTGTaGCAAACTGCTCTTCTCTGTCCACTTTATTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: IPGVWTLLSNQL*QTALLCPLYFS Trigger: AGAGAAATAAAGTGGACAGAGAAGAGCAGTTTGGCACAGCTGATTGCTAAGGAGTGTCCAGACTCCTGGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS CAA 90 bp | ATCACGGGATATTCAAACAGAACCTCCAGAGTCTTCAAGATATCCTaGTTCATGAGGCCAAATAAGAAACGCTTCATCCCGAGGAGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: ITGYSNRTSRVFKIS*FMRPNKKRFIPRRR Trigger: TCGCCTCCTCGGGATGAAGCGTTTCTTATTTGGCCTCATGAACAAGGATATCTTGAAGACTCTGGAGGTTCTGTTTGAATATCCCGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
||
| CDS TCA 72 bp | AACCAAGATCCAAACTTTTTAAGTGCTTGGTTGTTGTaGTCATACAGGCCAGGTCCTCGCAGCAGTTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: NQDPNFLSAWLL*SYRPGPRSSSV Trigger: CACAGAACTGCTGCGAGGACCTGGCCTGTATGATCACAACAACCAAGCACTTAAAAAGTTTGGATCTTGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133237.2 |
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| CDS CAA 72 bp | TCAAGATTGCTTTACTGTCTTTTTCTGGAGGACCCATaGTGCTTTCTGATGTCTGCTCCTGCTCTGGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: SRLLYCLFLEDP*CFLMSAPALVL Trigger: AAGGACCAGAGCAGGAGCAGACATCAGAAAGCACAATGGGTCCTCCAGAAAAAGACAGTAAAGCAATCTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| CDS CAA 72 bp | CCAAGGGATATCATGCTTTTTACTCCCACTCTATTTTaGGCCAGGCTGAGACACTTTAGCCTGGTGGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: PRDIMLFTPTLF*ARLRHFSLVVE Trigger: TTCAACCACCAGGCTAAAGTGTCTCAGCCTGGCCAAAAATAGAGTGGGAGTAAAAAGCATGATATCCCTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
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| CDS CAA 90 bp | AAGGCATTCCCAAGGGATATCATGCTTTTTACTCCCACTCTATTTTaGGCCAGGCTGAGACACTTTAGCCTGGTGGTTGAAATAAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: KAFPRDIMLFTPTLF*ARLRHFSLVVEIRS Trigger: GCTTCTTATTTCAACCACCAGGCTAAAGTGTCTCAGCCTGGCCAAAAATAGAGTGGGAGTAAAAAGCATGATATCCCTTGGGAATGCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
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| CDS TCA 72 bp | TTCCCAACTCCTGGTCTTCCATGTAGGATAATGGTGTaGGGCTGGAAGGTTTTCTGGTATGGTTTAAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: FPTPGLPCRIMV*GWKVFWYGLKA Trigger: TGCTTTTAAACCATACCAGAAAACCTTCCAGCCTCACACCATTATCCTACATGGAAGACCAGGAGTTGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| CDS GCA 72 bp | CTTCTGTTCCTCTTCCAATCCACGTGCTTTCAAGATTaGTTTACTGTCTTTTTCTGGAGGACCCATTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: LLFLFQSTCFQD*FTVFFWRTHCA Trigger: AGCACAATGGGTCCTCCAGAAAAAGACAGTAAAGCAATCTTGAAAGCACGTGGATTGGAAGAGGAACAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| CDS GCA 72 bp | TCTTGTAAGTCACCTCCATTATCTGATGTCTGCTCCTaGTCTGGTCCTTGGTCTTTCTGGATTGATTTACTG | + |
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Preference number: 6 (lower is better) Translates to: SCKSPPLSDVCS*SGPWSFWIDLL Trigger: CAGTAAATCAATCCAGAAAGACCAAGGACCAGAGCAGGAGCAGACATCAGATAATGGAGGTGACTTACAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086341.12 |
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| CDS CCA 72 bp | TCAGGATGTATATGGGCTGTTCATCCTTCCAGTCTCTaGATAGTGTCATATCATCATGTTGGAGGACAGAGT | + |
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Preference number: 6 (lower is better) Translates to: SGCIWAVHPSSL*IVSYHHVGGQS Trigger: ACTCTGTCCTCCAACATGATGATATGACACTATCCAGAGACTGGAAGGATGAACAGCCCATATACATCCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| CDS CCA 72 bp | TCAGAGAATGGAAGACTTGTATTCTATCAGACTCATTaGAGATGTTCTCGAGGACCAGCTGAGATCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SENGRLVFYQTH*RCSRGPAEISL Trigger: CAAGGAGATCTCAGCTGGTCCTCGAGAACATCTCCAATGAGTCTGATAGAATACAAGTCTTCCATTCTCTGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| CDS CAA 72 bp | CACAGTTGTCCAGTATCAACTTTTGCAGTAGACACATaGAGCTACTCAAGGCATTCCCAAGGGATATCATGC | + |
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Preference number: 6 (lower is better) Translates to: HSCPVSTFAVDT*SYSRHSQGISC Trigger: GCATGATATCCCTTGGGAATGCCTTGAGTAGCTCAATGTGTCTACTGCAAAAGTTGATACTGGACAACTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 |
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| CDS CAA 90 bp | TGCTTTCTGACTTCTGTTCCTCTTCCAATCCACGTGCTTTCAAGATaGCTTTACTGTCTTTTTCTGGAGGACCCATTGTGCTTTCTGATG | + |
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Preference number: 6 (lower is better) Translates to: CFLTSVPLPIHVLSR*LYCLFLEDPLCFLM Trigger: CATCAGAAAGCACAATGGGTCCTCCAGAAAAAGACAGTAAAGCAATCTTGAAAGCACGTGGATTGGAAGAGGAACAGAAGTCAGAAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| CDS TCA 72 bp | TGTCTGCTCCTGCTCTGGTCCTTGGTCTTTCTGGATTaGTTTACTGTCGTTTTCTGGAGAAGTCATTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: CLLLLWSLVFLD*FTVVFWRSHFS Trigger: AGAAAAATGACTTCTCCAGAAAACGACAGTAAATCAATCCAGAAAGACCAAGGACCAGAGCAGGAGCAGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| CDS GCA 72 bp | TCTTCCTTAGATTGTAAGGTTTCTGATGTCTGCTCCTaGTCTGGTCCTTGGTCTTTCTGGATTGATTTACTG | + |
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Preference number: 6 (lower is better) Translates to: SSLDCKVSDVCS*SGPWSFWIDLL Trigger: CAGTAAATCAATCCAGAAAGACCAAGGACCAGAGCAGGAGCAGACATCAGAAACCTTACAATCTAAGGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| CDS GCA 72 bp | TCATCTTCTTCCTTAGATTGTAAGGTTTCTGATGTCTaGTCCTGCTCTGGTCCTTGGTCTTTCTGGATTGAT | + |
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Preference number: 6 (lower is better) Translates to: SSSSLDCKVSDV*SCSGPWSFWID Trigger: ATCAATCCAGAAAGACCAAGGACCAGAGCAGGAGCAGACATCAGAAACCTTACAATCTAAGGAAGAAGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015866.14 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| CDS TCA 72 bp | CTTCTTCTGATCCACTGTCTTTCAGGATTGCTCTACTaGCATTTTCTGAAGGAGACATTGTGCTTTCTGACT | + |
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Preference number: 6 (lower is better) Translates to: LLLIHCLSGLLY*HFLKETLCFLT Trigger: AGTCAGAAAGCACAATGTCTCCTTCAGAAAATGTCAGTAGAGCAATCCTGAAAGACAGTGGATCAGAAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
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| CDS CAA 72 bp | TATTCAAACAGAACCTCCAGAGTCTTCAAGATATCCTaGTTCATGAGGCCAAATAAGAAACGCTTCATCCCG | + |
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Preference number: 6 (lower is better) Translates to: YSNRTSRVFKIS*FMRPNKKRFIP Trigger: CGGGATGAAGCGTTTCTTATTTGGCCTCATGAACAAGGATATCTTGAAGACTCTGGAGGTTCTGTTTGAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015866.14 ENSMUST00000086341.12 ENSMUST00000108441.8 ENSMUST00000133237.2 ENSMUST00000139661.8 |
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