Pregenerated sensors for NLRP4C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034690Ensembl transcript IDs: ENSMUST00000037728.13, ENSMUST00000121583.2, ENSMUST00000208360.2
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGGGCCAAATTAAGGATCCTGCTCTCTTTCTTTTGGAGGTAGTTTaGGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCT | + |
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Preference number: 1 (lower is better) Translates to: MGQIKDPALFLLEVV*GQNTAMFLAAEHPP Trigger: AGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACCTCCAAAAGAAAGAGAGCAGGATCCTTAATTTGGCCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037728.13 |
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| 3UTR GCA 72 bp | GGAGGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTaGAGCAGAACATCCACCTTTGTTTTCTGCTTCTGC | + |
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Preference number: 3 (lower is better) Translates to: GGSLRSEHSHVS*SRTSTFVFCFC Trigger: GCAGAAGCAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| 3UTR TCA 72 bp | ATTAAGGATCCTGCTCTCTTTCTTTTGGAGGTAGTTTaGGGTCAGAACACAGCCATGTTTCTTGCAGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: IKDPALFLLEVV*GQNTAMFLAAE Trigger: TTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACCTCCAAAAGAAAGAGAGCAGGATCCTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037728.13 |
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| 3UTR-3UTR CAA 90 bp | GTGTGGGAAAAACTGTCATTATATGGCAGACATTTTACCATAACTGTCTTTGAAAAAGTCACATCTATCTaGCAAAACACATCTGAATGG | + |
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Preference number: 3 (lower is better) Translates to: VWEKLSLYGRHFTITVFEKVTSI*QNTSEW Trigger: CCATTCAGATGTGTTTTGCAAGATAGATGTGACTTT...TTCAAAGACAGTTATGGTAAAATGTCTGCCATATAATGACAGTTTTTCCCACAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000037728.13 |
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| 3UTR TCA 72 bp | AGACATTTTACCATAACTGTCTTTGAATGGCCTGTTTaGATCTGTAGTGCAAACAAAAAGTCACATCTATCT | + |
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Preference number: 3 (lower is better) Translates to: RHFTITVFEWPV*ICSANKKSHLS Trigger: AGATAGATGTGACTTTTTGTTTGCACTACAGATTCAAACAGGCCATTCAAAGACAGTTATGGTAAAATGTCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037728.13 |
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| CDS-3UTR GCA 90 bp | GGAGGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCATTCCCGCTGCTCCTTaGAGGAACACCATGTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: GGSLRSEHSHVSCSRTSTIPAAP*RNTMCG Trigger: ACCACACATGGTGTTCCTGCAAGGAGCAGCGGGAAT...GGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR GCA 90 bp | GAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGCTGGCTGCTTCTCCGTaGAGGTATCACACAGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: EVRTQPCFLQQNIHLCFLLAASP*RYHTAP Trigger: CGGAGCTGTGTGATACCTGCACGGAGAAGCAGCCAG...CAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR TCA 90 bp | GGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGCTCGTTCTCCTGCAGGTTaGTTCCCCACAGGGTCTTAC | + |
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Preference number: 4 (lower is better) Translates to: GQNTAMFLAAEHPPLFSARSPAG*FPTGSY Trigger: GTAAGACCCTGTGGGGAATCAACCTGCAGGAGAACG...AGCAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR GCA 90 bp | TTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCCTGGCTGCTTCTCCGTaGAGGTATCACACAGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: LRSEHSHVSCSRTSTFVFLAASP*RYHTAP Trigger: CGGAGCTGTGTGATACCTGCACGGAGAAGCAGCCAG...GAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR GCA 90 bp | GGAGGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCCGGAGGCAAAGACCTTaGAGTCATCTGGTGAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: GGSLRSEHSHVSCSRTSTRRQRP*SHLVKG Trigger: ACCTTTCACCAGATGACTGCAAGGTCTTTGCCTCCG...GGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR CCA 90 bp | GGAGGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCGGTGGCACAAAGCCTTaGACAGAGAGGATATCCCTT | + |
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Preference number: 4 (lower is better) Translates to: GGSLRSEHSHVSCSRTSTGGTKP*TERISL Trigger: AAGGGATATCCTCTCTGTCCAAGGCTTTGTGCCACC...GGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR TCA 90 bp | AGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTCGTTCTCCTGCAGGTTaGTTCCCCACAGGGTCTTAC | + |
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Preference number: 4 (lower is better) Translates to: SLRSEHSHVSCSRTSTFVRSPAG*FPTGSY Trigger: GTAAGACCCTGTGGGGAATCAACCTGCAGGAGAACG...AACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR GCA 90 bp | GGAGGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCCGAAGTCCAAGTACATaGAGGGTACACTGTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: GGSLRSEHSHVSCSRTSTRSPST*RVHCCC Trigger: ACAGCAACAGTGTACCCTGCATGTACTTGGACTTCG...GGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR CCA 90 bp | GGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTAGAACGCAGTCTGGGTaGCACAAAGCCTTGGACAGA | + |
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Preference number: 4 (lower is better) Translates to: GSLRSEHSHVSCSRTSTFRTQSG*HKALDR Trigger: TCTGTCCAAGGCTTTGTGCCACCCAGACTGCGTTCT...AAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR CCA 90 bp | GGAGGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCGAGCTGATGTCTAGGTaGTTCAGTGTTTTGTTCCGC | + |
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Preference number: 4 (lower is better) Translates to: GGSLRSEHSHVSCSRTSTELMSR*FSVLFR Trigger: GCGGAACAAAACACTGAACCACCTAGACATCAGCTC...GGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR CCA 90 bp | AGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTCTTCAGGACACTGTCTaGGAGACTCAGAGCCCCACA | + |
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Preference number: 4 (lower is better) Translates to: SLRSEHSHVSCSRTSTFVLQDTV*ETQSPT Trigger: TGTGGGGCTCTGAGTCTCCCAGACAGTGTCCTGAAG...AACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR CCA 90 bp | TTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCCTTCAGGACACTGTCTaGGAGACTCAGAGCCCCACA | + |
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Preference number: 4 (lower is better) Translates to: LRSEHSHVSCSRTSTFVFLQDTV*ETQSPT Trigger: TGTGGGGCTCTGAGTCTCCCAGACAGTGTCCTGAAG...GAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR TCA 90 bp | GGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTATCCTCTATGGGAGCTaGGGTTTTGGGCCACTCTTT | + |
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Preference number: 4 (lower is better) Translates to: GSLRSEHSHVSCSRTSTFILYGS*GFGPLF Trigger: AAAGAGTGGCCCAAAACCTCAGCTCCCATAGAGGAT...AAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR GCA 90 bp | TTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCATTCCCGCTGCTCCTTaGAGGAACACCATGTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: LRSEHSHVSCSRTSTFVFIPAAP*RNTMCG Trigger: ACCACACATGGTGTTCCTGCAAGGAGCAGCGGGAAT...GAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR GCA 90 bp | GGAGGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTCAACATCAATGACTTaGCAATTCCCGCTGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: GGSLRSEHSHVSCSRTSTSTSMT*QFPLLL Trigger: AAGGAGCAGCGGGAATTGGCAAGTCATTGATGTTGA...GGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR GCA 90 bp | GGAGGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTGTGCACTCAACCCTaGCCTCCATTTTCTCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: GGSLRSEHSHVSCSRTSTLCTQP*PPFSQK Trigger: CTTTTGAGAAAATGGAGGGCAGGGTTGAGTGCACAA...GGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR GCA 90 bp | GGAGGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCCAGATAAAAGATGGCTaGACAGACCTCCTGGATAGA | + |
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Preference number: 4 (lower is better) Translates to: GGSLRSEHSHVSCSRTSTQIKDG*TDLLDR Trigger: TCTATCCAGGAGGTCTGTGCAGCCATCTTTTATCTG...GGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR CCA 90 bp | AGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGCTGGGAGCTGAGGTTTTaGGCCACTCTTTGGAGATCA | + |
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Preference number: 4 (lower is better) Translates to: RSEHSHVSCSRTSTFVFCWELRF*ATLWRS Trigger: TGATCTCCAAAGAGTGGCCCAAAACCTCAGCTCCCA...GCAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR CCA 90 bp | GGAGGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCAGTTTCACATCACCATaGGACAGGAATGTGAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: GGSLRSEHSHVSCSRTSTSFTSP*DRNVRL Trigger: CAACCTCACATTCCTGTCCCATGGTGATGTGAAACT...GGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR CCA 90 bp | GGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGCTGGTGGCACAAAGCCTTaGACAGAGAGGATATCCCTT | + |
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Preference number: 4 (lower is better) Translates to: GQNTAMFLAAEHPPLFSAGGTKP*TERISL Trigger: AAGGGATATCCTCTCTGTCCAAGGCTTTGTGCCACC...AGCAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR TCA 90 bp | GAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGTTCCTGCCCTCTCCATaGGATCCTTCCTATTCATCT | + |
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Preference number: 4 (lower is better) Translates to: EVRTQPCFLQQNIHLCFLFLPSP*DPSYSS Trigger: AGATGAATAGGAAGGATCTCATGGAGAGGGCAGGAA...CAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR TCA 90 bp | AGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGCAGCACAGAGCACATATaGTGCCAACACATGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: RSEHSHVSCSRTSTFVFCSTEHI*CQHMSS Trigger: GCTACTCATGTGTTGGCATCATATGTGCTCTGTGCT...GCAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR GCA 90 bp | GGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTAGCAATCTCTCTTCCTaGCCTCTCCATGAGATCCTT | + |
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Preference number: 4 (lower is better) Translates to: GSLRSEHSHVSCSRTSTFSNLSS*PLHEIL Trigger: AAGGATCTCATGGAGAGGGCAGGAAGAGAGATTGCT...AAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR GCA 90 bp | AGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGCAGCAATCTCTCTTCCTaGCCTCTCCATGAGATCCTT | + |
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Preference number: 4 (lower is better) Translates to: RSEHSHVSCSRTSTFVFCSNLSS*PLHEIL Trigger: AAGGATCTCATGGAGAGGGCAGGAAGAGAGATTGCT...GCAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR GCA 90 bp | AGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTCGGAGGCAAAGACCTTaGAGTCATCTGGTGAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: SLRSEHSHVSCSRTSTFVRRQRP*SHLVKG Trigger: ACCTTTCACCAGATGACTGCAAGGTCTTTGCCTCCG...AACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR GCA 90 bp | GAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGTGCAGGGTACACTGTTaGTGTTTCAGAGCCTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: EVRTQPCFLQQNIHLCFLCRVHC*CFRASN Trigger: GTTTGAGGCTCTGAAACAGCAACAGTGTACCCTGCA...CAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR GCA 90 bp | AGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGCCGAAGTCCAAGTACATaGAGGGTACACTGTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: RSEHSHVSCSRTSTFVFCRSPST*RVHCCC Trigger: ACAGCAACAGTGTACCCTGCATGTACTTGGACTTCG...GCAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR CCA 90 bp | TGCTCTCTTTCTTTTGGAGGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCTGGGAGCTGAGGTTTTaGGCCACTCTTTGGAGATCA | + |
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Preference number: 4 (lower is better) Translates to: CSLSFGGSLRSEHSHVSCWELRF*ATLWRS Trigger: TGATCTCCAAAGAGTGGCCCAAAACCTCAGCTCCCA...GCAAGAAACATGGCTGTGTTCTGACCTCAAACTACCTCCAAAAGAAAGAGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037728.13 |
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| CDS-3UTR CCA 90 bp | AGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGCATAGGATATCCTCTATaGGAGCTGAGGTTTTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: RSEHSHVSCSRTSTFVFCIGYPL*ELRFWA Trigger: GGCCCAAAACCTCAGCTCCCATAGAGGATATCCTAT...GCAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR CCA 90 bp | GGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTATAGGATATCCTCTATaGGAGCTGAGGTTTTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GSLRSEHSHVSCSRTSTFIGYPL*ELRFWA Trigger: GGCCCAAAACCTCAGCTCCCATAGAGGATATCCTAT...AAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR CCA 90 bp | GGAGGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTCACTCAGGACATTCTaGGTTGACAAGGATAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: GGSLRSEHSHVSCSRTSTSLRTF*VDKDSF Trigger: GAAACTATCCTTGTCAACCCAGAATGTCCTGAGTGA...GGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR TCA 90 bp | AGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCCTGCCCTCTCCATaGGATCCTTCCTATTCATCT | + |
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Preference number: 4 (lower is better) Translates to: SLRSEHSHVSCSRTSTFVFLPSP*DPSYSS Trigger: AGATGAATAGGAAGGATCTCATGGAGAGGGCAGGAA...AACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR TCA 90 bp | TTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCGGACCTGACATACAGTaGACAGCTGCTGGTTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LRSEHSHVSCSRTSTFVFGPDIQ*TAAGFL Trigger: AAGAAAACCAGCAGCTGTTCACTGTATGTCAGGTCC...GAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR GCA 90 bp | GGAGGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCCATACAGTGAACAGCTaGTGGTTTTCTTTCACCAAA | + |
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Preference number: 4 (lower is better) Translates to: GGSLRSEHSHVSCSRTSTHTVNS*WFSFTK Trigger: TTTGGTGAAAGAAAACCAGCAGCTGTTCACTGTATG...GGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR GCA 90 bp | GAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGCAGATAAAAGATGGCTaGACAGACCTCCTGGATAGA | + |
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Preference number: 4 (lower is better) Translates to: EVRTQPCFLQQNIHLCFLQIKDG*TDLLDR Trigger: TCTATCCAGGAGGTCTGTGCAGCCATCTTTTATCTG...CAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR GCA 90 bp | AGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTGCAGGGTACACTGTTaGTGTTTCAGAGCCTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: SLRSEHSHVSCSRTSTFVCRVHC*CFRASN Trigger: GTTTGAGGCTCTGAAACAGCAACAGTGTACCCTGCA...AACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR CCA 90 bp | GAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGAGTTTCACATCACCATaGGACAGGAATGTGAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: EVRTQPCFLQQNIHLCFLSFTSP*DRNVRL Trigger: CAACCTCACATTCCTGTCCCATGGTGATGTGAAACT...CAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR CCA 90 bp | AGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGCATGTTGCACTCTTCCTaGCTCAAGACATCACACAAC | + |
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Preference number: 4 (lower is better) Translates to: RSEHSHVSCSRTSTFVFCMLHSS*LKTSHN Trigger: GTTGTGTGATGTCTTGAGCCAGGAAGAGTGCAACAT...GCAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR CCA 90 bp | GAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGAGGTTCCTCAGGTTCTaGTTCTTCCTCAAGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EVRTQPCFLQQNIHLCFLRFLRF*FFLKTS Trigger: TGAAGTCTTGAGGAAGAACCAGAACCTGAGGAACCT...CAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR TCA 90 bp | TGCTCTCTTTCTTTTGGAGGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCTTTTGTCAACATCAATaGCTTGCCAATTCCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CSLSFGGSLRSEHSHVSCFCQHQ*LANSRC Trigger: GCAGCGGGAATTGGCAAGTCATTGATGTTGACAAAA...GCAAGAAACATGGCTGTGTTCTGACCTCAAACTACCTCCAAAAGAAAGAGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037728.13 |
||
| CDS-3UTR TCA 90 bp | GAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGCTTCCAAGTTGTCGATaGCAAATAAGAGTTTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: EVRTQPCFLQQNIHLCFLLPSCR*QIRVSP Trigger: CGGAGAAACTCTTATTTGTCATCGACAACTTGGAAG...CAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTGGACCTGACATACAGTaGACAGCTGCTGGTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FEVRTQPCFLQQNIHLCFGPDIQ*TAAGFL Trigger: AAGAAAACCAGCAGCTGTTCACTGTATGTCAGGTCC...AAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR TCA 90 bp | GAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGTGTCCTTACTGCTTATaGGCACAGAGCACATATGAT | + |
|
Preference number: 4 (lower is better) Translates to: EVRTQPCFLQQNIHLCFLCPYCL*AQSTYD Trigger: ATCATATGTGCTCTGTGCTCATAAGCAGTAAGGACA...CAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR GCA 90 bp | TTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCCTATTTTCACATTTGTaGACTCAACCCTGCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRSEHSHVSCSRTSTFVFLFSHL*TQPCPP Trigger: TGGAGGGCAGGGTTGAGTGCACAAATGTGAAAATAG...GAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCAGTAAAACAGCTTCATaGCATCTACCTGTTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GGSLRSEHSHVSCSRTSTSKTAS*HLPVLE Trigger: TTCAAGAACAGGTAGATGGCATGAAGCTGTTTTACT...GGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR GCA 90 bp | AGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGCTCAGCTTTTCTATGTTaGACTCTTCCTGGCTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSEHSHVSCSRTSTFVFCSAFLC*TLPGSR Trigger: TCTTGAGCCAGGAAGAGTGCAACATAGAAAAGCTGA...GCAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGCACAGTGAACAGCTGCTaGTTTTCTTTCACCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: RSEHSHVSCSRTSTFVFCTVNSC*FSFTKL Trigger: CAGTTTGGTGAAAGAAAACCAGCAGCTGTTCACTGT...GCAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CCA 90 bp | GAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGACAGTGAACAGCTGCTaGTTTTCTTTCACCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: EVRTQPCFLQQNIHLCFLTVNSC*FSFTKL Trigger: CAGTTTGGTGAAAGAAAACCAGCAGCTGTTCACTGT...CAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTGAGCTGATGTCTAGGTaGTTCAGTGTTTTGTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: FEVRTQPCFLQQNIHLCFELMSR*FSVLFR Trigger: GCGGAACAAAACACTGAACCACCTAGACATCAGCTC...AAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CCA 90 bp | TTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCAGGTTCCTCAGGTTCTaGTTCTTCCTCAAGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRSEHSHVSCSRTSTFVFRFLRF*FFLKTS Trigger: TGAAGTCTTGAGGAAGAACCAGAACCTGAGGAACCT...GAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTTTTTGTCAACATCAATaGCTTGCCAATTCCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FEVRTQPCFLQQNIHLCFFCQHQ*LANSRC Trigger: GCAGCGGGAATTGGCAAGTCATTGATGTTGACAAAA...AAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAA 43% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR TCA 90 bp | GAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGAACAAATTGAAGATGTaGGTGGTATACAGGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EVRTQPCFLQQNIHLCFLNKLKM*VVYREV Trigger: CACTTCCCTGTATACCACTCACATCTTCAATTTGTT...CAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR TCA 90 bp | TGCTCTCTTTCTTTTGGAGGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCTGTCCTTACTGCTTATaGGCACAGAGCACATATGAT | + |
|
Preference number: 4 (lower is better) Translates to: CSLSFGGSLRSEHSHVSCCPYCL*AQSTYD Trigger: ATCATATGTGCTCTGTGCTCATAAGCAGTAAGGACA...GCAAGAAACATGGCTGTGTTCTGACCTCAAACTACCTCCAAAAGAAAGAGAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037728.13 |
||
| CDS-3UTR GCA 90 bp | TTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTATTTTCACATTTGTaGACTCAACCCTGCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FEVRTQPCFLQQNIHLCFLFSHL*TQPCPP Trigger: TGGAGGGCAGGGTTGAGTGCACAAATGTGAAAATAG...AAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR GCA 90 bp | AGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTCAGCTTTTCTATGTTaGACTCTTCCTGGCTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLRSEHSHVSCSRTSTFVSAFLC*TLPGSR Trigger: TCTTGAGCCAGGAAGAGTGCAACATAGAAAAGCTGA...AACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGCGGATATTGGGCACTTTaGGGAATGAACAAATTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RSEHSHVSCSRTSTFVFCGYWAL*GMNKLK Trigger: CTTCAATTTGTTCATTCCCCAAAGTGCCCAATATCC...GCAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CCA 90 bp | TTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTCCTTACTTGGATATTaGGCACTTTGGGGAATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LRSEHSHVSCSRTSTFVFSLLGY*ALWGMN Trigger: GTTCATTCCCCAAAGTGCCCAATATCCAAGTAAGGA...GAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTATGTTGCACTCTTCCTaGCTCAAGACATCACACAAC | + |
|
Preference number: 4 (lower is better) Translates to: FEVRTQPCFLQQNIHLCFMLHSS*LKTSHN Trigger: GTTGTGTGATGTCTTGAGCCAGGAAGAGTGCAACAT...AAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTTCCAAGTTGTCGATaGCAAATAAGAGTTTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: FEVRTQPCFLQQNIHLCFLPSCR*QIRVSP Trigger: CGGAGAAACTCTTATTTGTCATCGACAACTTGGAAG...AAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR TCA 90 bp | AGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTAACAAATTGAAGATGTaGGTGGTATACAGGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLRSEHSHVSCSRTSTFVNKLKM*VVYREV Trigger: CACTTCCCTGTATACCACTCACATCTTCAATTTGTT...AACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR GCA 90 bp | GAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGAGTAAAACAGCTTCATaGCATCTACCTGTTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EVRTQPCFLQQNIHLCFLSKTAS*HLPVLE Trigger: TTCAAGAACAGGTAGATGGCATGAAGCTGTTTTACT...CAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CCA 90 bp | TTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCGGATATTGGGCACTTTaGGGAATGAACAAATTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRSEHSHVSCSRTSTFVFGYWAL*GMNKLK Trigger: CTTCAATTTGTTCATTCCCCAAAGTGCCCAATATCC...GAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTTCCTTACTTGGATATTaGGCACTTTGGGGAATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FEVRTQPCFLQQNIHLCFSLLGY*ALWGMN Trigger: GTTCATTCCCCAAAGTGCCCAATATCCAAGTAAGGA...AAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTTCACTCAGGACATTCTaGGTTGACAAGGATAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FEVRTQPCFLQQNIHLCFSLRTF*VDKDSF Trigger: GAAACTATCCTTGTCAACCCAGAATGTCCTGAGTGA...AAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGGGAAAAACTGTCATTATATGGCAGACATTTTACCATAACTGTCTTTGAAAGAACGCAGTCTGGGTaGCACAAAGCCTTGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VWEKLSLYGRHFTITVFERTQSG*HKALDR Trigger: TCTGTCCAAGGCTTTGTGCCACCCAGACTGCGTTCT...TTCAAAGACAGTTATGGTAAAATGTCTGCCATATAATGACAGTTTTTCCCACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037728.13 |
||
| CDS-3UTR TCA 90 bp | AGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTTCTTTCACCAAACTaGAGATTTCCTGTGTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLRSEHSHVSCSRTSTFVFLSPN*RFPVFW Trigger: CCAAAACACAGGAAATCTTCAGTTTGGTGAAAGAAA...AACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CCA 90 bp | GGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGCTCCAATATTCTCTAAGTaGCAGTTGGGATGTTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: GQNTAMFLAAEHPPLFSAPIFSK*QLGCFI Trigger: TATAAAACATCCCAACTGCCACTTAGAGAATATTGG...AGCAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR CCA 90 bp | TTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTAGATTTCCTGTGTTTTaGTCTTATCTTGGAACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FEVRTQPCFLQQNIHLCFRFPVF*SYLGTS Trigger: GCTTGTTCCAAGATAAGACCAAAACACAGGAAATCT...AAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR GCA 90 bp | GTGTGGGAAAAACTGTCATTATATGGCAGACATTTTACCATAACTGTCTTTGAATTGTGCACTCAACCCTaGCCTCCATTTTCTCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VWEKLSLYGRHFTITVFELCTQP*PPFSQK Trigger: CTTTTGAGAAAATGGAGGGCAGGGTTGAGTGCACAA...TTCAAAGACAGTTATGGTAAAATGTCTGCCATATAATGACAGTTTTTCCCACAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000037728.13 |
||
| CDS-3UTR CCA 90 bp | TTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCCAATATTCTCTAAGTaGCAGTTGGGATGTTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: FEVRTQPCFLQQNIHLCFPIFSK*QLGCFI Trigger: TATAAAACATCCCAACTGCCACTTAGAGAATATTGG...AAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS CCA 90 bp | GGGGAGCATCTTCCTCCTGAGCAAACTGCTCAGCAGGATACGCACTaGCTGCTTCTCCGTGCAGGTATCACACAGCTCCGACTCCCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GEHLPPEQTAQQDTH*LLLRAGITQLRLPF Trigger: GAACGGGAGTCGGAGCTGTGTGATACCTGCACGGAGAAGCAGCCAGTGCGTATCCTGCTGAGCAGTTTGCTCAGGAGGAAGATGCTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCACGGAGGCAAAGACCTaGCAGTCATCTGGTGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGSLRSEHSHVSCSRTSTTEAKT*QSSGER Trigger: CCTTTCACCAGATGACTGCAAGGTCTTTGCCTCCGT...GGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS GCA 90 bp | GCCTCAAACAGTACAATCAATCCACTGTGGTCCAAGGCGTTCTCCTaGAGGTTGATTCCCCACAGGGTCTTACAGTGGGTAAAAGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ASNSTINPLWSKAFS*RLIPHRVLQWVKAE Trigger: TTCTGCTTTTACCCACTGTAAGACCCTGTGGGGAATCAACCTGCAGGAGAACGCCTTGGACCACAGTGGATTGATTGTACTGTTTGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS-3UTR CAA 90 bp | GGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGGGTGGCACAAAGCCTaGGACAGAGAGGATATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GSLRSEHSHVSCSRTSTFGWHKA*DREDIP Trigger: AGGGATATCCTCTCTGTCCAAGGCTTTGTGCCACCC...AAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS TCA 90 bp | CTTGCTGCTGATCAGAACGGAGGCAAAGACCTTGCAGTCATCTGGTaGAAGGTTACAGGCTGCTACCATCAGCTTTTCTATGTTGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: LAADQNGGKDLAVIW*KVTGCYHQLFYVAL Trigger: GAGTGCAACATAGAAAAGCTGATGGTAGCAGCCTGTAACCTTTCACCAGATGACTGCAAGGTCTTTGCCTCCGTTCTGATCAGCAGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS-3UTR CAA 90 bp | TGCTCTCTTTCTTTTGGAGGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCGCGTTCTCCTGCAGGTaGATTCCCCACAGGGTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: CSLSFGGSLRSEHSHVSCAFSCR*IPHRVL Trigger: TAAGACCCTGTGGGGAATCAACCTGCAGGAGAACGC...GCAAGAAACATGGCTGTGTTCTGACCTCAAACTACCTCCAAAAGAAAGAGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037728.13 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTGCGTTCTCCTGCAGGTaGATTCCCCACAGGGTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SLRSEHSHVSCSRTSTFVAFSCR*IPHRVL Trigger: TAAGACCCTGTGGGGAATCAACCTGCAGGAGAACGC...AACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS CCA 90 bp | AGGTTACAGGCTGCTACCATCAGCTTTTCTATGTTGCACTCTTCCTaGCTCAAGACATCACACAACAGTTTCACATCACCATGGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: RLQAATISFSMLHSS*LKTSHNSFTSPWDR Trigger: CCTGTCCCATGGTGATGTGAAACTGTTGTGTGATGTCTTGAGCCAGGAAGAGTGCAACATAGAAAAGCTGATGGTAGCAGCCTGTAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS CCA 90 bp | AGGTTCCTCAGGTTCTGGTTCTTCCTCAAGACTTCAGCCAGGTCCTaGCAACCACTAGTGGTGATGAGACAATATCTTACACTTAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RFLRFWFFLKTSARS*QPLVVMRQYLTLSD Trigger: GTCACTAAGTGTAAGATATTGTCTCATCACCACTAGTGGTTGCCAGGACCTGGCTGAAGTCTTGAGGAAGAACCAGAACCTGAGGAACCT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS CCA 90 bp | CAGGCACCAGTTAGTGCGCAGGCTTCCAATCCAATATTCTCTAAGTaGCAGTTGGGATGTTTTATAGCATCACACAGGAGCTTCACACCA | + |
|
Preference number: 5 (lower is better) Translates to: QAPVSAQASNPIFSK*QLGCFIASHRSFTP Trigger: TGGTGTGAAGCTCCTGTGTGATGCTATAAAACATCCCAACTGCCACTTAGAGAATATTGGATTGGAAGCCTGCGCACTAACTGGTGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS-3UTR CAA 90 bp | GGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTGGGCCACTCTTaGGAGATCAATTCTGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSLRSEHSHVSCSRTSTFVLGHS*EINSAR Trigger: CCTGGCAGAATTGATCTCCAAAGAGTGGCCCAAAAC...AAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGGTTTTGGGCCACTCTTaGGAGATCAATTCTGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EVRTQPCFLQQNIHLCFLVLGHS*EINSAR Trigger: CCTGGCAGAATTGATCTCCAAAGAGTGGCCCAAAAC...CAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CAA 90 bp | AGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGCGACAGGAATGTGAGGTaGAGGTCCAAGTGCTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RSEHSHVSCSRTSTFVFCDRNVR*RSKCCK Trigger: TTTGCAGCACTTGGACCTCAACCTCACATTCCTGTC...GCAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCATCAGCTTTTCTATGTaGCACTCTTCCTGGCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GGSLRSEHSHVSCSRTSTISFSM*HSSWLK Trigger: CTTGAGCCAGGAAGAGTGCAACATAGAAAAGCTGAT...GGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CAA 90 bp | TTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCACGGAGGCAAAGACCTaGCAGTCATCTGGTGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LRSEHSHVSCSRTSTFVFTEAKT*QSSGER Trigger: CCTTTCACCAGATGACTGCAAGGTCTTTGCCTCCGT...GAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS TCA 90 bp | TTACTTGGATATTGGGCACTTTGGGGAATGAACAAATTGAAGATGTaGGTGGTATACAGGGAAGTGGTACGTCGGCAGACAGAGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLGYWALWGMNKLKM*VVYREVVRRQTETR Trigger: CCTGGTCTCTGTCTGCCGACGTACCACTTCCCTGTATACCACTCACATCTTCAATTTGTTCATTCCCCAAAGTGCCCAATATCCAAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS TCA 90 bp | GACAGGAATGTGAGGTTGAGGTCCAAGTGCTGCAAACACTGGTTCTaGATCAACTCAAAGAACAGGCGGTTATCACATAGGAAGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: DRNVRLRSKCCKHWF*INSKNRRLSHRKVT Trigger: TGTGACCTTCCTATGTGATAACCGCCTGTTCTTTGAGTTGATTCAGAACCAGTGTTTGCAGCACTTGGACCTCAACCTCACATTCCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS-3UTR CAA 90 bp | TTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCATGAGGAAAGAGGATTaGGGGAGCATCTTCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LRSEHSHVSCSRTSTFVFMRKED*GSIFLL Trigger: CAGGAGGAAGATGCTCCCCAAATCCTCTTTCCTCAT...GAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTATGAGGAAAGAGGATTaGGGGAGCATCTTCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLRSEHSHVSCSRTSTFVMRKED*GSIFLL Trigger: CAGGAGGAAGATGCTCCCCAAATCCTCTTTCCTCAT...AACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGTCACTGAGGGAGCAGTaGACTAACACCAAGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EVRTQPCFLQQNIHLCFLSLREQ*TNTKFF Trigger: GAAGAACTTGGTGTTAGTCAACTGCTCCCTCAGTGA...CAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CAA 90 bp | AGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGCATGCAGGGTACACTGTaGCTGTTTCAGAGCCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RSEHSHVSCSRTSTFVFCMQGTL*LFQSLK Trigger: TTTGAGGCTCTGAAACAGCAACAGTGTACCCTGCAT...GCAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCCATCTTCTTCACATCTaGACAGCAGAAGTAGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GGSLRSEHSHVSCSRTSTHLLHI*TAEVED Trigger: ATCTTCTACTTCTGCTGTCAAGATGTGAAGAAGATG...GGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CAA 90 bp | TGCTCTCTTTCTTTTGGAGGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCGCTCTGAAGCTGAGCTaGGCTTTCCTTACTTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: CSLSFGGSLRSEHSHVSCALKLS*AFLTWI Trigger: TATCCAAGTAAGGAAAGCCAAGCTCAGCTTCAGAGC...GCAAGAAACATGGCTGTGTTCTGACCTCAAACTACCTCCAAAAGAAAGAGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037728.13 |
||
| CDS-3UTR CAA 90 bp | TTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCGCTCTGAAGCTGAGCTaGGCTTTCCTTACTTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: LRSEHSHVSCSRTSTFVFALKLS*AFLTWI Trigger: TATCCAAGTAAGGAAAGCCAAGCTCAGCTTCAGAGC...GAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CAA 90 bp | TGCTCTCTTTCTTTTGGAGGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCATGCAGGGTACACTGTaGCTGTTTCAGAGCCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: CSLSFGGSLRSEHSHVSCMQGTL*LFQSLK Trigger: TTTGAGGCTCTGAAACAGCAACAGTGTACCCTGCAT...GCAAGAAACATGGCTGTGTTCTGACCTCAAACTACCTCCAAAAGAAAGAGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037728.13 |
||
| CDS GCA 90 bp | TCAAAGTCAGTAATTCGAAGTCCAAGTACATGCAGGGTACACTGTTaGTGTTTCAGAGCCTCAAACAGTACAATCAATCCACTGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SKSVIRSPSTCRVHC*CFRASNSTINPLWS Trigger: GGACCACAGTGGATTGATTGTACTGTTTGAGGCTCTGAAACAGCAACAGTGTACCCTGCATGTACTTGGACTTCGAATTACTGACTTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGATCTTCTGGAAGATTTaGAAGGTCATATCCCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: EVRTQPCFLQQNIHLCFLIFWKI*KVISQA Trigger: AGCCTGGGATATGACCTTCAAAATCTTCCAGAAGAT...CAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CAA 90 bp | GGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTATCTTCTGGAAGATTTaGAAGGTCATATCCCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSLRSEHSHVSCSRTSTFIFWKI*KVISQA Trigger: AGCCTGGGATATGACCTTCAAAATCTTCCAGAAGAT...AAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTCAATTCTGCCAGGCTaGCTCTCTTCATCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLRSEHSHVSCSRTSTFVSILPG*LSSSSS Trigger: TGAAGAAGATGAAGAGAGCAAGCCTGGCAGAATTGA...AACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CAA 90 bp | GGATCCTGCTCTCTTTCTTTTGGAGGTAGTTTGAGGTCAGAACACAGCCATGTTAGAGAGGATATCCCTTaGTCCAAGTTGTTAGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: GSCSLSFGGSLRSEHSHVREDIP*SKLLDD Trigger: GTCATCTAACAACTTGGACAAAGGGATATCCTCTCT...AACATGGCTGTGTTCTGACCTCAAACTACCTCCAAAAGAAAGAGAGCAGGATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037728.13 |
||
| CDS-3UTR CAA 90 bp | TTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTTCACTGAGGGAGCAGTaGACTAACACCAAGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FEVRTQPCFLQQNIHLCFSLREQ*TNTKFF Trigger: GAAGAACTTGGTGTTAGTCAACTGCTCCCTCAGTGA...AAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS TCA 90 bp | ACTCCCGTTCAGACATATCACATTCCATCACTTCCAAGTTGTCGATaGCAAATAAGAGTTTCTCCGGTTGGGATAGGATATCCTCTATGG | + |
|
Preference number: 5 (lower is better) Translates to: TPVQTYHIPSLPSCR*QIRVSPVGIGYPLW Trigger: CCATAGAGGATATCCTATCCCAACCGGAGAAACTCTTATTTGTCATCGACAACTTGGAAGTGATGGAATGTGATATGTCTGAACGGGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
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| CDS GCA 90 bp | AGAAGGCTTCATCGTCCATCTCAAACAGACAGTAAAACAGCTTCATaGCATCTACCTGTTCTTGAAGCTCTTCGTTGCCACTTATGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RRLHRPSQTDSKTAS*HLPVLEALRCHLWF Trigger: AAACCATAAGTGGCAACGAAGAGCTTCAAGAACAGGTAGATGGCATGAAGCTGTTTTACTGTCTGTTTGAGATGGACGATGAAGCCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
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| CDS GCA 90 bp | TCCTGGGTTTCCTTATCAAAGTCAGTAATTCGAAGTCCAAGTACATaGAGGGTACACTGTTGCTGTTTCAGAGCCTCAAACAGTACAATC | + |
|
Preference number: 5 (lower is better) Translates to: SWVSLSKSVIRSPST*RVHCCCFRASNSTI Trigger: GATTGTACTGTTTGAGGCTCTGAAACAGCAACAGTGTACCCTGCATGTACTTGGACTTCGAATTACTGACTTTGATAAGGAAACCCAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
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| CDS CCA 90 bp | TCATATCCCAGGCTTTCTTCTCCTCATAATGTTTCAACAGTAAGTTaGCAAGGTCTTCACGAGATGCCTTCTTCACTTCGGTCCAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SYPRLSSPHNVSTVS*QGLHEMPSSLRSKK Trigger: TTTCTTGGACCGAAGTGAAGAAGGCATCTCGTGAAGACCTTGCCAACTTACTGTTGAAACATTATGAGGAGAAGAAAGCCTGGGATATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS-3UTR CAA 90 bp | TTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTTCAATTCTGCCAGGCTaGCTCTCTTCATCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FEVRTQPCFLQQNIHLCFSILPG*LSSSSS Trigger: TGAAGAAGATGAAGAGAGCAAGCCTGGCAGAATTGA...AAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR CAA 90 bp | GGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTTCCATCACTTCCAAGTaGTCGATGACAAATAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GSLRSEHSHVSCSRTSTFSITSK*SMTNKS Trigger: ACTCTTATTTGTCATCGACAACTTGGAAGTGATGGA...AAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CAA 90 bp | AGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGCTGTTTTGGTCTTATCTaGGAACAAGCTGCGGAAATA | + |
|
Preference number: 5 (lower is better) Translates to: RSEHSHVSCSRTSTFVFCCFGLI*EQAAEI Trigger: TATTTCCGCAGCTTGTTCCAAGATAAGACCAAAACA...GCAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR CAA 90 bp | GGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGCTTGGATATTGGGCACTTaGGGGAATGAACAAATTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GQNTAMFLAAEHPPLFSAWILGT*GNEQIE Trigger: TTCAATTTGTTCATTCCCCAAAGTGCCCAATATCCA...AGCAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
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| CDS-3UTR CAA 90 bp | TTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTATCAGCTTTTCTATGTaGCACTCTTCCTGGCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FEVRTQPCFLQQNIHLCFISFSM*HSSWLK Trigger: CTTGAGCCAGGAAGAGTGCAACATAGAAAAGCTGAT...AAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGGGAAAAACTGTCATTATATGGCAGACATTTTACCATAACTGTCTTTGAAGGGTGGCACAAAGCCTaGGACAGAGAGGATATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VWEKLSLYGRHFTITVFEGWHKA*DREDIP Trigger: AGGGATATCCTCTCTGTCCAAGGCTTTGTGCCACCC...TTCAAAGACAGTTATGGTAAAATGTCTGCCATATAATGACAGTTTTTCCCACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037728.13 |
||
| CDS-3UTR CAA 90 bp | TTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTTTACTATTTTCACATTaGTGCACTCAACCCTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: FEVRTQPCFLQQNIHLCFLLFSH*CTQPCP Trigger: AGGGCAGGGTTGAGTGCACAAATGTGAAAATAGTAA...AAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CAA 90 bp | GGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTAAGATTTCCTGTGTTTaGGTCTTATCTTGGAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: GSLRSEHSHVSCSRTSTFKISCV*VLSWNK Trigger: CTTGTTCCAAGATAAGACCAAAACACAGGAAATCTT...AAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGGATTTTTCAGATTTCTaGCTCTTCTCAAGGATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: EVRTQPCFLQQNIHLCFLDFSDF*LFSRIL Trigger: AAGGATCCTTGAGAAGAGCAAGAAATCTGAAAAATC...CAGAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CAA 90 bp | TTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTAGAGAGGATATCCCTTaGTCCAAGTTGTTAGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: FEVRTQPCFLQQNIHLCFREDIP*SKLLDD Trigger: GTCATCTAACAACTTGGACAAAGGGATATCCTCTCT...AAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CAA 90 bp | TTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTCTGCAAAATCTCCTGTTaGAGGAATTCCTTAAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRSEHSHVSCSRTSTFVFCKISC*RNSLNF Trigger: GAAGTTTAAGGAATTCCTCAAACAGGAGATTTTGCA...GAAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTAGGCAAGCATTAATTTaGTCAACATCAATGACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLRSEHSHVSCSRTSTFVRQALI*STSMTC Trigger: GCAAGTCATTGATGTTGACAAAATTAATGCTTGCCT...AACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS-3UTR CAA 90 bp | TGCTCTCTTTCTTTTGGAGGTAGTTTGAGGTCAGAACACAGCCATGTTTCTTGCAAGATTTCCTGTGTTTaGGTCTTATCTTGGAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: CSLSFGGSLRSEHSHVSCKISCV*VLSWNK Trigger: CTTGTTCCAAGATAAGACCAAAACACAGGAAATCTT...GCAAGAAACATGGCTGTGTTCTGACCTCAAACTACCTCCAAAAGAAAGAGAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037728.13 |
||
| CDS-3UTR CAA 90 bp | TTTGAGGTCAGAACACAGCCATGTTTCTTGCAGCAGAACATCCACCTTTGTTTTGATTTTTCAGATTTCTaGCTCTTCTCAAGGATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: FEVRTQPCFLQQNIHLCFDFSDF*LFSRIL Trigger: AAGGATCCTTGAGAAGAGCAAGAAATCTGAAAAATC...AAAACAAAGGTGGATGTTCTGCTGCAAGAAACATGGCTGTGTTCTGACCTCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 |
||
| CDS GCA 90 bp | GATGCCTTCTTCACTTCGGTCCAAGAAATCTGTTTCAGTCTCAACTaGAAAATCTCCTGTTTGAGGAATTCCTTAAACTTCATGAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: DAFFTSVQEICFSLN*KISCLRNSLNFMNS Trigger: AGAATTCATGAAGTTTAAGGAATTCCTCAAACAGGAGATTTTGCAGTTGAGACTGAAACAGATTTCTTGGACCGAAGTGAAGAAGGCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGGGAAAAACTGTCATTATATGGCAGACATTTTACCATAACTGTCTTTGAATTACTATTTTCACATTaGTGCACTCAACCCTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VWEKLSLYGRHFTITVFELLFSH*CTQPCP Trigger: AGGGCAGGGTTGAGTGCACAAATGTGAAAATAGTAA...TTCAAAGACAGTTATGGTAAAATGTCTGCCATATAATGACAGTTTTTCCCACAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037728.13 |
||
| CDS-3UTR CAA 90 bp | GTGTGGGAAAAACTGTCATTATATGGCAGACATTTTACCATAACTGTCTTTGAACATCTTCTTCACATCTaGACAGCAGAAGTAGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: VWEKLSLYGRHFTITVFEHLLHI*TAEVED Trigger: ATCTTCTACTTCTGCTGTCAAGATGTGAAGAAGATG...TTCAAAGACAGTTATGGTAAAATGTCTGCCATATAATGACAGTTTTTCCCACAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037728.13 |
||
| CDS-3UTR CAA 90 bp | GTGTGGGAAAAACTGTCATTATATGGCAGACATTTTACCATAACTGTCTTTGAATGCAAAATCTCCTGTTaGAGGAATTCCTTAAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: VWEKLSLYGRHFTITVFECKISC*RNSLNF Trigger: GAAGTTTAAGGAATTCCTCAAACAGGAGATTTTGCA...TTCAAAGACAGTTATGGTAAAATGTCTGCCATATAATGACAGTTTTTCCCACAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037728.13 |
||
| CDS CCA 72 bp | CTTCCTCCTGAGCAAACTGCTCAGCAGGATACGCACTaGCTGCTTCTCCGTGCAGGTATCACACAGCTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: LPPEQTAQQDTH*LLLRAGITQLR Trigger: TCGGAGCTGTGTGATACCTGCACGGAGAAGCAGCCAGTGCGTATCCTGCTGAGCAGTTTGCTCAGGAGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS CAA 72 bp | ATCAATCCACTGTGGTCCAAGGCGTTCTCCTGCAGGTaGATTCCCCACAGGGTCTTACAGTGGGTAAAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: INPLWSKAFSCR*IPHRVLQWVKA Trigger: TGCTTTTACCCACTGTAAGACCCTGTGGGGAATCAACCTGCAGGAGAACGCCTTGGACCACAGTGGATTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS CAA 90 bp | AACAGTACAATCAATCCACTGTGGTCCAAGGCGTTCTCCTGCAGGTaGATTCCCCACAGGGTCTTACAGTGGGTAAAAGCAGAAGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: NSTINPLWSKAFSCR*IPHRVLQWVKAEAR Trigger: CCTTGCTTCTGCTTTTACCCACTGTAAGACCCTGTGGGGAATCAACCTGCAGGAGAACGCCTTGGACCACAGTGGATTGATTGTACTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS GCA 72 bp | GTCAACATCAATGACTTGCCAATTCCCGCTGCTCCTTaGAGGAACACCATGTGTGGTTTCTTTGCAGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: VNINDLPIPAAP*RNTMCGFFAVT Trigger: GGTGACTGCAAAGAAACCACACATGGTGTTCCTGCAAGGAGCAGCGGGAATTGGCAAGTCATTGATGTTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS CCA 72 bp | GTTGGGATAGGATATCCTCTATGGGAGCTGAGGTTTTaGGCCACTCTTTGGAGATCAATTCTGCCAGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VGIGYPLWELRF*ATLWRSILPGL Trigger: CAAGCCTGGCAGAATTGATCTCCAAAGAGTGGCCCAAAACCTCAGCTCCCATAGAGGATATCCTATCCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
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| CDS CCA 72 bp | TGGCTCAAGACATCACACAACAGTTTCACATCACCATaGGACAGGAATGTGAGGTTGAGGTCCAAGTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: WLKTSHNSFTSP*DRNVRLRSKCC Trigger: GCAGCACTTGGACCTCAACCTCACATTCCTGTCCCATGGTGATGTGAAACTGTTGTGTGATGTCTTGAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
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| CDS CCA 72 bp | TGTTTCAGAGCCTCAAACAGTACAATCAATCCACTGTaGTCCAAGGCGTTCTCCTGCAGGTTGATTCCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: CFRASNSTINPL*SKAFSCRLIPH Trigger: GTGGGGAATCAACCTGCAGGAGAACGCCTTGGACCACAGTGGATTGATTGTACTGTTTGAGGCTCTGAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
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| CDS CCA 72 bp | TATCCTCTATGGGAGCTGAGGTTTTGGGCCACTCTTTaGAGATCAATTCTGCCAGGCTTGCTCTCTTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: YPLWELRFWATL*RSILPGLLSSS Trigger: AGATGAAGAGAGCAAGCCTGGCAGAATTGATCTCCAAAGAGTGGCCCAAAACCTCAGCTCCCATAGAGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
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| CDS CCA 72 bp | TTGACTAACACCAAGTTCTTCAGAACGCAGTCTGGGTaGCACAAAGCCTTGGACAGAGAGGATATCCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LTNTKFFRTQSG*HKALDREDIPL Trigger: CAAAGGGATATCCTCTCTGTCCAAGGCTTTGTGCCACCCAGACTGCGTTCTGAAGAACTTGGTGTTAGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS CAA 72 bp | ATATCCTCTATGGGAGCTGAGGTTTTGGGCCACTCTTaGGAGATCAATTCTGCCAGGCTTGCTCTCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: ISSMGAEVLGHS*EINSARLALFI Trigger: GATGAAGAGAGCAAGCCTGGCAGAATTGATCTCCAAAGAGTGGCCCAAAACCTCAGCTCCCATAGAGGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS CAA 72 bp | CCACAGAGAACCTTCAGCCCTTCATCCTTCAGGTCATaGGAGCTGATGTCTAGGTGGTTCAGTGTTTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PQRTFSPSSFRS*ELMSRWFSVLF Trigger: GAACAAAACACTGAACCACCTAGACATCAGCTCCAATGACCTGAAGGATGAAGGGCTGAAGGTTCTCTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
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| CDS CAA 90 bp | ATGCCTTCTGACCAGGCAAGCATTAATTTTGTCAACATCAATGACTaGCCAATTCCCGCTGCTCCTTGCAGGAACACCATGTGTGGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: MPSDQASINFVNIND*PIPAAPCRNTMCGF Trigger: GAAACCACACATGGTGTTCCTGCAAGGAGCAGCGGGAATTGGCAAGTCATTGATGTTGACAAAATTAATGCTTGCCTGGTCAGAAGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
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| CDS CAA 90 bp | CCAGTTAGTGCGCAGGCTTCCAATCCAATATTCTCTAAGTGGCAGTaGGGATGTTTTATAGCATCACACAGGAGCTTCACACCAGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: PVSAQASNPIFSKWQ*GCFIASHRSFTPAS Trigger: AGATGCTGGTGTGAAGCTCCTGTGTGATGCTATAAAACATCCCAACTGCCACTTAGAGAATATTGGATTGGAAGCCTGCGCACTAACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS TCA 72 bp | GATCAGAACGGAGGCAAAGACCTTGCAGTCATCTGGTaGAAGGTTACAGGCTGCTACCATCAGCTTTTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: DQNGGKDLAVIW*KVTGCYHQLFY Trigger: ATAGAAAAGCTGATGGTAGCAGCCTGTAACCTTTCACCAGATGACTGCAAGGTCTTTGCCTCCGTTCTGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS CCA 72 bp | ATAAGAGTTTCTCCGGTTGGGATAGGATATCCTCTATaGGAGCTGAGGTTTTGGGCCACTCTTTGGAGATCA | + |
|
Preference number: 6 (lower is better) Translates to: IRVSPVGIGYPL*ELRFWATLWRS Trigger: TGATCTCCAAAGAGTGGCCCAAAACCTCAGCTCCCATAGAGGATATCCTATCCCAACCGGAGAAACTCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS CCA 72 bp | AGGTTCTGGTTCTTCCTCAAGACTTCAGCCAGGTCCTaGCAACCACTAGTGGTGATGAGACAATATCTTACA | + |
|
Preference number: 6 (lower is better) Translates to: RFWFFLKTSARS*QPLVVMRQYLT Trigger: TGTAAGATATTGTCTCATCACCACTAGTGGTTGCCAGGACCTGGCTGAAGTCTTGAGGAAGAACCAGAACCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS CAA 72 bp | GACCAGGCAAGCATTAATTTTGTCAACATCAATGACTaGCCAATTCCCGCTGCTCCTTGCAGGAACACCATG | + |
|
Preference number: 6 (lower is better) Translates to: DQASINFVNIND*PIPAAPCRNTM Trigger: CATGGTGTTCCTGCAAGGAGCAGCGGGAATTGGCAAGTCATTGATGTTGACAAAATTAATGCTTGCCTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
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| CDS CAA 72 bp | AAGTTCTTCAGAACGCAGTCTGGGTGGCACAAAGCCTaGGACAGAGAGGATATCCCTTTGTCCAAGTTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: KFFRTQSGWHKA*DREDIPLSKLL Trigger: TAACAACTTGGACAAAGGGATATCCTCTCTGTCCAAGGCTTTGTGCCACCCAGACTGCGTTCTGAAGAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS TCA 72 bp | TATTGGGCACTTTGGGGAATGAACAAATTGAAGATGTaGGTGGTATACAGGGAAGTGGTACGTCGGCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: YWALWGMNKLKM*VVYREVVRRQT Trigger: TGTCTGCCGACGTACCACTTCCCTGTATACCACTCACATCTTCAATTTGTTCATTCCCCAAAGTGCCCAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS CCA 72 bp | GCTGCTACCATCAGCTTTTCTATGTTGCACTCTTCCTaGCTCAAGACATCACACAACAGTTTCACATCACCA | + |
|
Preference number: 6 (lower is better) Translates to: AATISFSMLHSS*LKTSHNSFTSP Trigger: TGGTGATGTGAAACTGTTGTGTGATGTCTTGAGCCAGGAAGAGTGCAACATAGAAAAGCTGATGGTAGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
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| CDS CAA 72 bp | GGGTCAGCTTCTTCTTCAAATGAGCTTGATATAACTTaGAGTGTCCAGCAATCTCTCTTCCTGCCCTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GSASSSNELDIT*SVQQSLFLPSP Trigger: TGGAGAGGGCAGGAAGAGAGATTGCTGGACACTCAAAGTTATATCAAGCTCATTTGAAGAAGAAGCTGACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
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| CDS CAA 72 bp | GAAAGGTTACAGGCTGCTACCATCAGCTTTTCTATGTaGCACTCTTCCTGGCTCAAGACATCACACAACAGT | + |
|
Preference number: 6 (lower is better) Translates to: ERLQAATISFSM*HSSWLKTSHNS Trigger: ACTGTTGTGTGATGTCTTGAGCCAGGAAGAGTGCAACATAGAAAAGCTGATGGTAGCAGCCTGTAACCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
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| CDS CAA 72 bp | GCGCAGGCTTCCAATCCAATATTCTCTAAGTGGCAGTaGGGATGTTTTATAGCATCACACAGGAGCTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: AQASNPIFSKWQ*GCFIASHRSFT Trigger: TGTGAAGCTCCTGTGTGATGCTATAAAACATCCCAACTGCCACTTAGAGAATATTGGATTGGAAGCCTGCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
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| CDS CAA 90 bp | GCTCTGAAGCTGAGCTTGGCTTTCCTTACTTGGATATTGGGCACTTaGGGGAATGAACAAATTGAAGATGTGAGTGGTATACAGGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: ALKLSLAFLTWILGT*GNEQIEDVSGIQGS Trigger: ACTTCCCTGTATACCACTCACATCTTCAATTTGTTCATTCCCCAAAGTGCCCAATATCCAAGTAAGGAAAGCCAAGCTCAGCTTCAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
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| CDS CAA 90 bp | TCATCTGGTGAAAGGTTACAGGCTGCTACCATCAGCTTTTCTATGTaGCACTCTTCCTGGCTCAAGACATCACACAACAGTTTCACATCA | + |
|
Preference number: 6 (lower is better) Translates to: SSGERLQAATISFSM*HSSWLKTSHNSFTS Trigger: TGATGTGAAACTGTTGTGTGATGTCTTGAGCCAGGAAGAGTGCAACATAGAAAAGCTGATGGTAGCAGCCTGTAACCTTTCACCAGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS CCA 72 bp | AGGCTTTCTTCTCCTCATAATGTTTCAACAGTAAGTTaGCAAGGTCTTCACGAGATGCCTTCTTCACTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: RLSSPHNVSTVS*QGLHEMPSSLR Trigger: CCGAAGTGAAGAAGGCATCTCGTGAAGACCTTGCCAACTTACTGTTGAAACATTATGAGGAGAAGAAAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
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| CDS CAA 72 bp | GCTCTGAAGCTGAGCTTGGCTTTCCTTACTTGGATATaGGGCACTTTGGGGAATGAACAAATTGAAGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: ALKLSLAFLTWI*GTLGNEQIEDV Trigger: CACATCTTCAATTTGTTCATTCCCCAAAGTGCCCAATATCCAAGTAAGGAAAGCCAAGCTCAGCTTCAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
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| CDS CAA 90 bp | ACGCAGTCTGGGTGGCACAAAGCCTTGGACAGAGAGGATATCCCTTaGTCCAAGTTGTTAGATGACAAATTAAGATGCTTTAACATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TQSGWHKALDREDIP*SKLLDDKLRCFNIL Trigger: CAAGATGTTAAAGCATCTTAATTTGTCATCTAACAACTTGGACAAAGGGATATCCTCTCTGTCCAAGGCTTTGTGCCACCCAGACTGCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
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| CDS CAA 90 bp | ATCAAAGTCAGTAATTCGAAGTCCAAGTACATGCAGGGTACACTGTaGCTGTTTCAGAGCCTCAAACAGTACAATCAATCCACTGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: IKVSNSKSKYMQGTL*LFQSLKQYNQSTVV Trigger: GACCACAGTGGATTGATTGTACTGTTTGAGGCTCTGAAACAGCAACAGTGTACCCTGCATGTACTTGGACTTCGAATTACTGACTTTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
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| CDS TCA 72 bp | ACAAGTGCTTTAAGGGTGCAGCTGGGGTACATCAGATaGCTATATAACACCAAAGAGGCTGTTTCATTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: TSALRVQLGYIR*LYNTKEAVSLR Trigger: TCTCAATGAAACAGCCTCTTTGGTGTTATATAGTCATCTGATGTACCCCAGCTGCACCCTTAAAGCACTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
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| CDS GCA 72 bp | GTAATTCGAAGTCCAAGTACATGCAGGGTACACTGTTaGTGTTTCAGAGCCTCAAACAGTACAATCAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: VIRSPSTCRVHC*CFRASNSTINP Trigger: TGGATTGATTGTACTGTTTGAGGCTCTGAAACAGCAACAGTGTACCCTGCATGTACTTGGACTTCGAATTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
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| CDS GCA 72 bp | TCCTTATCAAAGTCAGTAATTCGAAGTCCAAGTACATaGAGGGTACACTGTTGCTGTTTCAGAGCCTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: SLSKSVIRSPST*RVHCCCFRASN Trigger: GTTTGAGGCTCTGAAACAGCAACAGTGTACCCTGCATGTACTTGGACTTCGAATTACTGACTTTGATAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS CAA 72 bp | TCCCGTTCAGACATATCACATTCCATCACTTCCAAGTaGTCGATGACAAATAAGAGTTTCTCCGGTTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SRSDISHSITSK*SMTNKSFSGWD Trigger: ATCCCAACCGGAGAAACTCTTATTTGTCATCGACAACTTGGAAGTGATGGAATGTGATATGTCTGAACGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
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| CDS CAA 72 bp | GGGTGGCACAAAGCCTTGGACAGAGAGGATATCCCTTaGTCCAAGTTGTTAGATGACAAATTAAGATGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: GWHKALDREDIP*SKLLDDKLRCF Trigger: AAAGCATCTTAATTTGTCATCTAACAACTTGGACAAAGGGATATCCTCTCTGTCCAAGGCTTTGTGCCACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS CAA 72 bp | AGTAATTCGAAGTCCAAGTACATGCAGGGTACACTGTaGCTGTTTCAGAGCCTCAAACAGTACAATCAATCC | + |
|
Preference number: 6 (lower is better) Translates to: SNSKSKYMQGTL*LFQSLKQYNQS Trigger: GGATTGATTGTACTGTTTGAGGCTCTGAAACAGCAACAGTGTACCCTGCATGTACTTGGACTTCGAATTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
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| CDS CAA 72 bp | CTGAGCTTGGCTTTCCTTACTTGGATATTGGGCACTTaGGGGAATGAACAAATTGAAGATGTGAGTGGTATA | + |
|
Preference number: 6 (lower is better) Translates to: LSLAFLTWILGT*GNEQIEDVSGI Trigger: TATACCACTCACATCTTCAATTTGTTCATTCCCCAAAGTGCCCAATATCCAAGTAAGGAAAGCCAAGCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS TCA 72 bp | CAGACATATCACATTCCATCACTTCCAAGTTGTCGATaGCAAATAAGAGTTTCTCCGGTTGGGATAGGATAT | + |
|
Preference number: 6 (lower is better) Translates to: QTYHIPSLPSCR*QIRVSPVGIGY Trigger: ATATCCTATCCCAACCGGAGAAACTCTTATTTGTCATCGACAACTTGGAAGTGATGGAATGTGATATGTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
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| CDS CAA 72 bp | AAGTTGTTAGATGACAAATTAAGATGCTTTAACATCTaGCTGCTGATCAGAACGGAGGCAAAGACCTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: KLLDDKLRCFNI*LLIRTEAKTLQ Trigger: CTGCAAGGTCTTTGCCTCCGTTCTGATCAGCAGCAAGATGTTAAAGCATCTTAATTTGTCATCTAACAACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS CAA 90 bp | TTATCTTGGAACAAGCTGCGGAAATACATCTTAATATTGCTCTCATaGAATCCTGTTACTATTTTCACATTTGTGCACTCAACCCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LSWNKLRKYILILLS*NPVTIFTFVHSTLP Trigger: GGGCAGGGTTGAGTGCACAAATGTGAAAATAGTAACAGGATTCAATGAGAGCAATATTAAGATGTATTTCCGCAGCTTGTTCCAAGATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS GCA 72 bp | TTCACTTCGGTCCAAGAAATCTGTTTCAGTCTCAACTaGAAAATCTCCTGTTTGAGGAATTCCTTAAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: FTSVQEICFSLN*KISCLRNSLNF Trigger: GAAGTTTAAGGAATTCCTCAAACAGGAGATTTTGCAGTTGAGACTGAAACAGATTTCTTGGACCGAAGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS CAA 72 bp | TGGTTTTCTTTCACCAAACTGAAGATTTCCTGTGTTTaGGTCTTATCTTGGAACAAGCTGCGGAAATACATC | + |
|
Preference number: 6 (lower is better) Translates to: WFSFTKLKISCV*VLSWNKLRKYI Trigger: GATGTATTTCCGCAGCTTGTTCCAAGATAAGACCAAAACACAGGAAATCTTCAGTTTGGTGAAAGAAAACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS CAA 90 bp | AACAGCTGCTGGTTTTCTTTCACCAAACTGAAGATTTCCTGTGTTTaGGTCTTATCTTGGAACAAGCTGCGGAAATACATCTTAATATTG | + |
|
Preference number: 6 (lower is better) Translates to: NSCWFSFTKLKISCV*VLSWNKLRKYILIL Trigger: CAATATTAAGATGTATTTCCGCAGCTTGTTCCAAGATAAGACCAAAACACAGGAAATCTTCAGTTTGGTGAAAGAAAACCAGCAGCTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS GCA 72 bp | AGTAGAAGATATAGGAGAATTTGTTCTGAAACACCATaGCTTCTGACCAGGCAAGCATTAATTTTGTCAACA | + |
|
Preference number: 6 (lower is better) Translates to: SRRYRRICSETP*LLTRQALILST Trigger: TGTTGACAAAATTAATGCTTGCCTGGTCAGAAGGCATGGTGTTTCAGAACAAATTCTCCTATATCTTCTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS CAA 72 bp | CACCAAACTGAAGATTTCCTGTGTTTTGGTCTTATCTaGGAACAAGCTGCGGAAATACATCTTAATATTGCT | + |
|
Preference number: 6 (lower is better) Translates to: HQTEDFLCFGLI*EQAAEIHLNIA Trigger: AGCAATATTAAGATGTATTTCCGCAGCTTGTTCCAAGATAAGACCAAAACACAGGAAATCTTCAGTTTGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS CAA 72 bp | AAAGCCTTGGACAGAGAGGATATCCCTTTGTCCAAGTaGTTAGATGACAAATTAAGATGCTTTAACATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: KALDREDIPLSK*LDDKLRCFNIL Trigger: CAAGATGTTAAAGCATCTTAATTTGTCATCTAACAACTTGGACAAAGGGATATCCTCTCTGTCCAAGGCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS CAA 90 bp | GTTTTCTTTCACCAAACTGAAGATTTCCTGTGTTTTGGTCTTATCTaGGAACAAGCTGCGGAAATACATCTTAATATTGCTCTCATTGAA | + |
|
Preference number: 6 (lower is better) Translates to: VFFHQTEDFLCFGLI*EQAAEIHLNIALIE Trigger: TTCAATGAGAGCAATATTAAGATGTATTTCCGCAGCTTGTTCCAAGATAAGACCAAAACACAGGAAATCTTCAGTTTGGTGAAAGAAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
||
| CDS CAA 72 bp | AACAAGCTGCGGAAATACATCTTAATATTGCTCTCATaGAATCCTGTTACTATTTTCACATTTGTGCACTCA | + |
|
Preference number: 6 (lower is better) Translates to: NKLRKYILILLS*NPVTIFTFVHS Trigger: TGAGTGCACAAATGTGAAAATAGTAACAGGATTCAATGAGAGCAATATTAAGATGTATTTCCGCAGCTTGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037728.13 ENSMUST00000121583.2 ENSMUST00000208360.2 |
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